Identified secondary metabolite clusters

Cluster Type From To Size (kb) Core domains Product/substrate predicted by subgroup Most similar known cluster MIBiG BGC-ID
The following clusters are from record NC_083337.1:
Cluster 1Saccharide-Alkaloid126360561126683908323.35Bet_v_1, Transferase, UDPGT_2*saccharide--
Cluster 2Mate136516206137476948960.742OG-FeII_Oxy, ADH_N, ADH_zinc_N, Abhydrolase_3, DIOX_N, GMC_oxred_C, GMC_oxred_N, MatE, Methyltransf_11, p450---
Cluster 3Putative140074895140335861260.97Epimerase, p450, polyprenyl_synt---
Cluster 4Terpene144076301144578711502.412OG-FeII_Oxy, DIOX_N, Prenyltransf, Terpene_synth, Terpene_synth_C, p450---
Cluster 5Saccharide164519404164676222156.82Epimerase, Glycos_transf_2, Transferase---
The following clusters are from record NC_083338.1:
Cluster 6Fatty_acid92354039441738206.34FA_hydroxylase, Methyltransf_11, p450---
Cluster 7Saccharide128742056129271546529.49Glyco_hydro_1, Methyltransf_11, Methyltransf_3, p450---
Cluster 8Saccharide142976562143132132155.57Aminotran_1_2, Glycos_transf_2, SE---
Cluster 9Putative143476487143658308181.82Methyltransf_3, Peptidase_S10---
Cluster 10Terpene147289344147709029419.69Terpene_synth, Terpene_synth_C, p450---
The following clusters are from record NC_083339.1:
Cluster 11Saccharide114320188115111829791.64AMP-binding, UDPGT_2, p450---
Cluster 12Saccharide-Alkaloid127417133127635472218.34Aminotran_1_2, Glycos_transf_1, Orn_Arg_deC_N, Orn_DAP_Arg_deC, PALP, Pyridoxal_deC---
The following clusters are from record NC_083340.1:
Cluster 13Alkaloid72930727546959253.89Cu_amine_oxid, Epimerase, p450---
Cluster 14Putative1299706613482922485.862OG-FeII_Oxy, DIOX_N, adh_short_C2, p450---
Cluster 15Terpene1912111219814038692.93Terpene_synth, Terpene_synth_C, Transferase, p450-lycosantalonol/beta-phellandrene (26% of genes show similarity)BGC0001322.3_c1
Cluster 16Cyclopeptide26383408278922071508.80BURP---
Cluster 17Mate-Saccharide141392854141825330432.482OG-FeII_Oxy, Amino_oxidase, Aminotran_3, DIOX_N, ECH_2, Epimerase, MatE, UDPGT_2, p450flavonoidalpha-chaconine/alpha-solanine (63% of genes show similarity)BGC0002722.2_c1
Cluster 18Saccharide-Terpene147003613147202235198.62Glycos_transf_1, SQHop_cyclase_C, SQHop_cyclase_N, p450lupeoltirucalla (21% of genes show similarity)BGC0001314.3_c1
The following clusters are from record NC_083341.1:
Cluster 19Saccharide23012252412570111.34Glycos_transf_2, UDPGT_2, p450*saccharide--
Cluster 20Saccharide-Polyketide65220117111743589.732OG-FeII_Oxy, Cellulose_synt, Chal_sti_synt_C, Chal_sti_synt_N, Methyltransf_7---
Cluster 21Fatty_acid-Alkaloid1937757019833317455.75Aminotran_1_2, FA_desaturase, Str_synth---
Cluster 22Cyclopeptide139968296140695973727.68BURP---
The following clusters are from record NC_083342.1:
Cluster 23Saccharide36649763819586154.61Epimerase, Transferase, UDPGT_2alkaloid, cytokinin--
Cluster 24Putative48542345330238476.00Aldo_ket_red, Epimerase, Transferase, p450---
Cluster 25Saccharide113518268113800072281.80Epimerase, Glycos_transf_1, adh_short, adh_short_C2, p450---
Cluster 26Terpene114884642115036612151.97Methyltransf_11, PRISE, adh_short_C2---
Cluster 27Saccharide127671568127954276282.71DAHP_synth_2, UDPGT_2, UbiAcyanogenic glucoside-2, monoterpenoid-2--
Cluster 28Putative131971755132096827125.07Abhydrolase_3, Peptidase_S10---
The following clusters are from record NC_083343.1:
Cluster 29Cyclopeptide371007249165601206.49BURP---
Cluster 30Fatty_acid107853214108754680901.47CER1-like_C, FA_desaturase, FA_hydroxylase, adh_short, p450-falcarindiol (100% of genes show similarity)BGC0002404.2_c1
Cluster 31Polyketide115130234115413307283.07Abhydrolase_3, Chal_sti_synt_C, adh_short_C2---
Cluster 32Saccharide121336933121539359202.43Glycos_transf_2, Peptidase_S10---
Cluster 33Saccharide127832107128156232324.12Peptidase_S10, Transferase, UDPGT_2carboxyl-3--
Cluster 34Lignan-Saccharide-Polyketide128564843128763797198.95Aldo_ket_red, Chal_sti_synt_C, Chal_sti_synt_N, Dirigent, UDPGT_2*saccharide--
Cluster 35Fatty_acid134044736134187058142.32FA_desaturase, Prenyltransf, adh_short-falcarindiol (75% of genes show similarity)BGC0002404.2_c1
Cluster 36Fatty_acid134463548134575866112.322OG-FeII_Oxy, AMP-binding, DIOX_N, Transferase---
The following clusters are from record NC_083344.1:
Cluster 37Terpene103302536104107200804.66PRISE, Transferase, p450---
Cluster 38Saccharide119260982119418489157.51Epimerase, Methyltransf_2, UDPGT_2flavonoid-3, oleananes-3--
Cluster 39Alkaloid130401048130541409140.36Methyltransf_2, Str_synth, Transferase---
The following clusters are from record NC_083345.1:
Cluster 40Saccharide995850103482638.98Aldo_ket_red, UDPGT_2---
Cluster 41Terpene31685673337816169.25AMP-binding, Epimerase, Terpene_synth, Terpene_synth_C---
Cluster 42Polyketide1175969011979714220.02Chal_sti_synt_C, Chal_sti_synt_N, Methyltransf_7, SE---
Cluster 43Saccharide-Terpene2114896721443720294.75ADH_N, ADH_zinc_N, Terpene_synth, Terpene_synth_C, UDPGT_2, p450*saccharide--
Cluster 44Alkaloid2379373223987229193.50ADH_N, ADH_zinc_N, Epimerase, Pyridoxal_deC---
Cluster 45Alkaloid111398786111953734554.952OG-FeII_Oxy, Acetyltransf_1, DIOX_N, Pyridoxal_deC---
Cluster 46Terpene118200145118534695334.55GMC_oxred_C, GMC_oxred_N, Terpene_synth, Terpene_synth_C, p450-monoterpenes-diterpenes (35% of genes show similarity)BGC0001324.3_c1
The following clusters are from record NC_083346.1:
Cluster 47Saccharide969972210093724394.002OG-FeII_Oxy, ADH_N, ADH_zinc_N, DIOX_N, Glycos_transf_1---
The following clusters are from record NC_083347.1:
Cluster 48Phenolamide-Alkaloid1688357117178350294.782OG-FeII_Oxy, DIOX_N, Pyridoxal_deC, Transferase---
Cluster 49Putative2736616627866888500.722OG-FeII_Oxy, Aldo_ket_red, DIOX_N, Epimerase, p450---
Cluster 50Saccharide279599472803202672.08Cellulose_synt, UDPGT_2oleananes-4, flavonoid-2--
Cluster 51Saccharide-Terpene3100680231592742585.94Glycos_transf_1, SQHop_cyclase_C, SQHop_cyclase_N, p450lupeoltirucalla (21% of genes show similarity)BGC0001314.3_c1
Cluster 52Polyketide12367626512377589499.63Abhydrolase_3, Chal_sti_synt_C, Methyltransf_11---
The following clusters are from record NC_083348.1:
Cluster 53Saccharide6991129870015305104.013Beta_HSD, Transferase, UDPGT_2---
Cluster 54Saccharide7082370470998118174.41AMP-binding, Amino_oxidase, Glycos_transf_1, SQS_PSY---
Cluster 55Cyclopeptide7613747176917493780.02BURP-alpha-chaconine/alpha-solanine (13% of genes show similarity)BGC0002722.2_c1
Cluster 56Fatty_acid-Saccharide-Alkaloid7714375577330542186.79BBE, FAD_binding_4, FA_hydroxylase, Methyltransf_11, UDPGT_2*saccharide--
Cluster 57Saccharide9363333293766954133.62UDPGT_2, p450, polyprenyl_syntsmall phenolic-2--
Cluster 58Saccharide-Polyketide9379247494088142295.67Abhydrolase_3, Chal_sti_synt_C, NAD_binding_1, UDPGT_2, p450*saccharide--
Cluster 59Saccharide101476120101630620154.50AMP-binding, Peptidase_S10, UDPGT_2---

NC_083337 - Cluster 1 - Saccharide-alkaloid

Gene cluster description

NC_083337 - Gene Cluster 1. Type = saccharide-alkaloid. Location: 126360561 - 126683908 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/plant: (minimum(4,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083337 - Cluster 2 - Mate

Gene cluster description

NC_083337 - Gene Cluster 2. Type = MatE. Location: 136516206 - 137476948 nt. Click on genes for more information.
Show pHMM detection rules used
plants/MatE: (minimum(4,[MatE,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[MatE]))
plants/plant: (minimum(4,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083337 - Cluster 3 - Putative

Gene cluster description

NC_083337 - Gene Cluster 3. Type = putative. Location: 140074895 - 140335861 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083337 - Cluster 4 - Terpene

Gene cluster description

NC_083337 - Gene Cluster 4. Type = terpene. Location: 144076301 - 144578711 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/terpene: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083337 - Cluster 5 - Saccharide

Gene cluster description

NC_083337 - Gene Cluster 5. Type = saccharide. Location: 164519404 - 164676222 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083338 - Cluster 6 - Fatty_acid

Gene cluster description

NC_083338 - Gene Cluster 6. Type = fatty_acid. Location: 9235403 - 9441738 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083338 - Cluster 7 - Saccharide

Gene cluster description

NC_083338 - Gene Cluster 7. Type = saccharide. Location: 128742056 - 129271546 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083338 - Cluster 8 - Saccharide

Gene cluster description

NC_083338 - Gene Cluster 8. Type = saccharide. Location: 142976562 - 143132132 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083338 - Cluster 9 - Putative

Gene cluster description

NC_083338 - Gene Cluster 9. Type = putative. Location: 143476487 - 143658308 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083338 - Cluster 10 - Terpene

Gene cluster description

NC_083338 - Gene Cluster 10. Type = terpene. Location: 147289344 - 147709029 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083339 - Cluster 11 - Saccharide

Gene cluster description

NC_083339 - Gene Cluster 11. Type = saccharide. Location: 114320188 - 115111829 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083339 - Cluster 12 - Saccharide-alkaloid

Gene cluster description

NC_083339 - Gene Cluster 12. Type = saccharide-alkaloid. Location: 127417133 - 127635472 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/plant: (minimum(4,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083340 - Cluster 13 - Alkaloid

Gene cluster description

NC_083340 - Gene Cluster 13. Type = alkaloid. Location: 7293072 - 7546959 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083340 - Cluster 14 - Putative

Gene cluster description

NC_083340 - Gene Cluster 14. Type = putative. Location: 12997066 - 13482922 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083340 - Cluster 15 - Terpene

Gene cluster description

NC_083340 - Gene Cluster 15. Type = terpene. Location: 19121112 - 19814038 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/terpene: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

Similar known gene clusters

NC_083340 - Cluster 16 - Cyclopeptide

Gene cluster description

NC_083340 - Gene Cluster 16. Type = cyclopeptide. Location: 26383408 - 27892207 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083340 - Cluster 17 - Mate-saccharide

Gene cluster description

NC_083340 - Gene Cluster 17. Type = MatE-saccharide. Location: 141392854 - 141825330 nt. Click on genes for more information.
Show pHMM detection rules used
plants/MatE: (minimum(4,[MatE,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[MatE]))
plants/plant: (minimum(4,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

Similar known gene clusters

NC_083340 - Cluster 18 - Saccharide-terpene

Gene cluster description

NC_083340 - Gene Cluster 18. Type = saccharide-terpene. Location: 147003613 - 147202235 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))
plants/terpene: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

Similar known gene clusters

NC_083341 - Cluster 19 - Saccharide

Gene cluster description

NC_083341 - Gene Cluster 19. Type = saccharide. Location: 2301225 - 2412570 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083341 - Cluster 20 - Saccharide-polyketide

Gene cluster description

NC_083341 - Gene Cluster 20. Type = saccharide-polyketide. Location: 6522011 - 7111743 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/polyketide: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))
plants/saccharide: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083341 - Cluster 21 - Fatty_acid-alkaloid

Gene cluster description

NC_083341 - Gene Cluster 21. Type = fatty_acid-alkaloid. Location: 19377570 - 19833317 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/fatty_acid: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083341 - Cluster 22 - Cyclopeptide

Gene cluster description

NC_083341 - Gene Cluster 22. Type = cyclopeptide. Location: 139968296 - 140695973 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeat found in LOC132641914
Repeat occurs 3 times in a sequence of 789 amino acids
Location between 140383373 and 140386304
Coverage of 2.28 %
Instances:
GLCKQF | GLCKQG | GLCTHG |
pattern: GLC[KT][QH][GF]
MLRLTLKSPLKPPLISSLFLLNPSFFTTTNLAVNHREPPPSATGKSRILSFFLQNHTKGSTNH
LQQNPCFKNLIFELNSLEIEGIVEKLSVGNTESALEFFFLLRNDYGFKHSRVSYIVIAHILAKK
QRFRALKFHLQYLVQQEGSGSAHSICELLSSRFQKWDSNHVVWDMLASAYSWCQMVNDALYVFA
KMKDSNIHASIITYNNLLYSLRHTDNIWDVYDDIKASGINPSKYTNSIVIDGLCKQFLMQKAVD
FLRETECRESGPCVVAFNTLMSSSCKMGSIDVAKSFFCMMFKCGLHPNVYSYNILIHGLSVAGA
MEEALEFTDDMKKHGLEPNQVTYNVLAKGFHLLGMMNGVWKFVNEMLHKGIDPDIFTYTMLICG
YYNDEGIKLKEETGVHASDISDTMLLSSLCKSGRLDEALNLFHEIESSGHKPDPIMYSILISGL
CKQG
LVEMAFQLYNDMLCCKRILPNIVAHRSILKSFCERGYICEARVLFDAFINCDLMDDVVLG
NIMIDGYAKLGDIGEAVQVYQLITGKGIMPTIVTFNSLIYGFCKARKFDDARNWVDTIYSHGLI
PSSRTYTILMDAYGEEGKIEAVFELLEEMKARAIEPTHVTYTVIMKCLCRRRQMHESVRILKGM
LPDGFQPDEIFYNTIIKKLCEARDMKGAFRLHKEMAVHKLQPSRVTYNILLNGLCTHGELKNAE
ELFSTLQDVGLMKCDYTILIKAYCAKGSVDKAVVLFQKMIEKGFEISIRDYSAVINSFNHIRDR
NSVFQLSSLMMKCGLDTDYNCG

Similar gene clusters

NC_083342 - Cluster 23 - Saccharide

Gene cluster description

NC_083342 - Gene Cluster 23. Type = saccharide. Location: 3664976 - 3819586 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083342 - Cluster 24 - Putative

Gene cluster description

NC_083342 - Gene Cluster 24. Type = putative. Location: 4854234 - 5330238 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083342 - Cluster 25 - Saccharide

Gene cluster description

NC_083342 - Gene Cluster 25. Type = saccharide. Location: 113518268 - 113800072 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083342 - Cluster 26 - Terpene

Gene cluster description

NC_083342 - Gene Cluster 26. Type = terpene. Location: 114884642 - 115036612 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083342 - Cluster 27 - Saccharide

Gene cluster description

NC_083342 - Gene Cluster 27. Type = saccharide. Location: 127671568 - 127954276 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083342 - Cluster 28 - Putative

Gene cluster description

NC_083342 - Gene Cluster 28. Type = putative. Location: 131971755 - 132096827 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083343 - Cluster 29 - Cyclopeptide

Gene cluster description

NC_083343 - Gene Cluster 29. Type = cyclopeptide. Location: 3710072 - 4916560 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083343 - Cluster 30 - Fatty_acid

Gene cluster description

NC_083343 - Gene Cluster 30. Type = fatty_acid. Location: 107853214 - 108754680 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))
plants/plant: (minimum(4,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

Similar known gene clusters

NC_083343 - Cluster 31 - Polyketide

Gene cluster description

NC_083343 - Gene Cluster 31. Type = polyketide. Location: 115130234 - 115413307 nt. Click on genes for more information.
Show pHMM detection rules used
plants/polyketide: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083343 - Cluster 32 - Saccharide

Gene cluster description

NC_083343 - Gene Cluster 32. Type = saccharide. Location: 121336933 - 121539359 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083343 - Cluster 33 - Saccharide

Gene cluster description

NC_083343 - Gene Cluster 33. Type = saccharide. Location: 127832107 - 128156232 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083343 - Cluster 34 - Lignan-saccharide-polyketide

Gene cluster description

NC_083343 - Gene Cluster 34. Type = lignan-saccharide-polyketide. Location: 128564843 - 128763797 nt. Click on genes for more information.
Show pHMM detection rules used
plants/lignan: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Dirigent]))
plants/plant: (minimum(4,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/polyketide: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))
plants/saccharide: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083343 - Cluster 35 - Fatty_acid

Gene cluster description

NC_083343 - Gene Cluster 35. Type = fatty_acid. Location: 134044736 - 134187058 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

Similar known gene clusters

NC_083343 - Cluster 36 - Fatty_acid

Gene cluster description

NC_083343 - Gene Cluster 36. Type = fatty_acid. Location: 134463548 - 134575866 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083344 - Cluster 37 - Terpene

Gene cluster description

NC_083344 - Gene Cluster 37. Type = terpene. Location: 103302536 - 104107200 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/terpene: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083344 - Cluster 38 - Saccharide

Gene cluster description

NC_083344 - Gene Cluster 38. Type = saccharide. Location: 119260982 - 119418489 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083344 - Cluster 39 - Alkaloid

Gene cluster description

NC_083344 - Gene Cluster 39. Type = alkaloid. Location: 130401048 - 130541409 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/plant: (minimum(4,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083345 - Cluster 40 - Saccharide

Gene cluster description

NC_083345 - Gene Cluster 40. Type = saccharide. Location: 995850 - 1034826 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083345 - Cluster 41 - Terpene

Gene cluster description

NC_083345 - Gene Cluster 41. Type = terpene. Location: 3168567 - 3337816 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083345 - Cluster 42 - Polyketide

Gene cluster description

NC_083345 - Gene Cluster 42. Type = polyketide. Location: 11759690 - 11979714 nt. Click on genes for more information.
Show pHMM detection rules used
plants/polyketide: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083345 - Cluster 43 - Saccharide-terpene

Gene cluster description

NC_083345 - Gene Cluster 43. Type = saccharide-terpene. Location: 21148967 - 21443720 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))
plants/terpene: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083345 - Cluster 44 - Alkaloid

Gene cluster description

NC_083345 - Gene Cluster 44. Type = alkaloid. Location: 23793732 - 23987229 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083345 - Cluster 45 - Alkaloid

Gene cluster description

NC_083345 - Gene Cluster 45. Type = alkaloid. Location: 111398786 - 111953734 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/plant: (minimum(4,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083345 - Cluster 46 - Terpene

Gene cluster description

NC_083345 - Gene Cluster 46. Type = terpene. Location: 118200145 - 118534695 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

Similar known gene clusters

NC_083346 - Cluster 47 - Saccharide

Gene cluster description

NC_083346 - Gene Cluster 47. Type = saccharide. Location: 9699722 - 10093724 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083347 - Cluster 48 - Phenolamide-alkaloid

Gene cluster description

NC_083347 - Gene Cluster 48. Type = phenolamide-alkaloid. Location: 16883571 - 17178350 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/phenolamide: (minimum(2,[MatE,Orn_Arg_deC_N,YjeF_N,Putative_PNPOx,PNP_phzG_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,Pyridoxal_deC]) or minimum(2,[MatE,Orn_Arg_deC_N,YjeF_N,Putative_PNPOx,PNP_phzG_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,Orn_DAP_Arg_deC,Orn_Arg_deC_N]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083347 - Cluster 49 - Putative

Gene cluster description

NC_083347 - Gene Cluster 49. Type = putative. Location: 27366166 - 27866888 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083347 - Cluster 50 - Saccharide

Gene cluster description

NC_083347 - Gene Cluster 50. Type = saccharide. Location: 27959947 - 28032026 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083347 - Cluster 51 - Saccharide-terpene

Gene cluster description

NC_083347 - Gene Cluster 51. Type = saccharide-terpene. Location: 31006802 - 31592742 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))
plants/terpene: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

Similar known gene clusters

NC_083347 - Cluster 52 - Polyketide

Gene cluster description

NC_083347 - Gene Cluster 52. Type = polyketide. Location: 123676265 - 123775894 nt. Click on genes for more information.
Show pHMM detection rules used
plants/polyketide: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083348 - Cluster 53 - Saccharide

Gene cluster description

NC_083348 - Gene Cluster 53. Type = saccharide. Location: 69911298 - 70015305 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083348 - Cluster 54 - Saccharide

Gene cluster description

NC_083348 - Gene Cluster 54. Type = saccharide. Location: 70823704 - 70998118 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083348 - Cluster 55 - Cyclopeptide

Gene cluster description

NC_083348 - Gene Cluster 55. Type = cyclopeptide. Location: 76137471 - 76917493 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeat found in LOC132623609
Repeat occurs 19 times in a sequence of 643 amino acids
Location between 76525505 and 76529458
Coverage of 23.64 %
Instances:
VGSWYQAA | VGSWYQAA | VGSWYKAA | VGSWYQAA | VGSWYQAA
VGSWYQAA | VGSWYQAA | VGSWYQAA | VGSWYQAA | VGSWYQAA
VGSWYQAA | VGSWYQAA | VGSWYQAA | VGSWYQAV | VGSWYQAA
VGSWYQAA | VGSWYQAA | VGSTRTFM | VGSDGTKV |
pattern: VGS[TWD][YRG][QKT][AKF][AMV]
MELHHHYFFILLSLAFIASHAANLSPEVYWKVKLPNTPMPRPIKDALHYSEASEGDVHKLRQP
WGVGSWYQAANEGDVHKLRQPYGVGSWYQAATEGEVKKLRQPYGVGSWYKAASEGDVKKLRQPW
GVGSWYQAASEGDVKKLRQPWGVGSWYQAATEGDVQKLRQPYGVGSWYQAATEGDVQKLRQPYG
VGSWYQAA
TEGEVKKLRQPYGVGSWYQAANEGDVKKLRQPWGVGSWYQAATEGDVQRLRQPYGV
GSWYQAA
TEGDVQKLRQPYGVGSWYQAATEGEVKKLRQPYGVGSWYQAANEGDVKKIRQPWGVG
SWYQAA
NEGDVKKLRQPWGVGSWYQAVTEGDVQKLRQPYGVGSWYQAATEGDVQKLRQPYGVGS
WYQAA
TEGEVKKLRQPYGVGSWYQAANEGDVNENLPVTPYFFETDLRQGKKMNLPSLKNYNPAP
ILPRKVADSIPFSSDKIEEILNHFSIDKDSEGAKMIKKTIKMCEEPAGNGEKKYCATSLESMVD
FTSSYLGTNNIIALSTLVEKETPEVQIYTIEEVKEKANGKGVICHKVTYPYAIHYCHSVGSTRT
FM
VSMVGSDGTKVNAVSECHEDTAPMNPKALPFQLLNVKPGDKPICHFILDDQIALVPSQDATQ
VSEN
Repeat found in LOC132623609
Repeat occurs 19 times in a sequence of 665 amino acids
Location between 76525505 and 76529458
Coverage of 22.86 %
Instances:
VGSWYQAA | VGSWYQAA | VGSWYKAA | VGSWYQAA | VGSWYQAA
VGSWYQAA | VGSWYQAA | VGSWYQAA | VGSWYQAA | VGSWYQAA
VGSWYQAA | VGSWYQAA | VGSWYQAA | VGSWYQAV | VGSWYQAA
VGSWYQAA | VGSWYQAA | VGSTRTFM | VGSDGTKV |
pattern: VGS[TWD][YRG][QKT][AKF][AMV]
MELHHHYFFILLSLAFIASHAANLSPEVYWKVKLPNTPMPRPIKDALHYSEASEGDVHKLRQP
YGIAIRWYQAANEGDVKKLRQPWGVGSWYQAANEGDVHKLRQPYGVGSWYQAATEGEVKKLRQP
YGVGSWYKAASEGDVKKLRQPWGVGSWYQAASEGDVKKLRQPWGVGSWYQAATEGDVQKLRQPY
GVGSWYQAATEGDVQKLRQPYGVGSWYQAATEGEVKKLRQPYGVGSWYQAANEGDVKKLRQPWG
VGSWYQAA
TEGDVQRLRQPYGVGSWYQAATEGDVQKLRQPYGVGSWYQAATEGEVKKLRQPYGV
GSWYQAA
NEGDVKKIRQPWGVGSWYQAANEGDVKKLRQPWGVGSWYQAVTEGDVQKLRQPYGVG
SWYQAA
TEGDVQKLRQPYGVGSWYQAATEGEVKKLRQPYGVGSWYQAANEGDVNENLPVTPYFF
ETDLRQGKKMNLPSLKNYNPAPILPRKVADSIPFSSDKIEEILNHFSIDKDSEGAKMIKKTIKM
CEEPAGNGEKKYCATSLESMVDFTSSYLGTNNIIALSTLVEKETPEVQIYTIEEVKEKANGKGV
ICHKVTYPYAIHYCHSVGSTRTFMVSMVGSDGTKVNAVSECHEDTAPMNPKALPFQLLNVKPGD
KPICHFILDDQIALVPSQDATQVSEN
Repeat found in LOC132621606
Repeat occurs 5 times in a sequence of 400 amino acids
Location between 76251905 and 76256979
Coverage of 8.75 %
Instances:
GEVFRKD | GEVLQKD | GEVLEKD | GEVLRKD | GEVLRKD

pattern: GEV[LF][QRE]KD
MKRSDVHSHAEFRWLLDSCFVDQSSLIFGDEIDLSYYDLYGSLKLVLVNCGKLPANQEALKDA
VVEIFNCREEDTPYSSVAAVTVGKEASCCTLIADKFARTSPEILAGQGFGRLLLAGILVDTGNL
TNPQTTTKDKYMTTLLINGAGRFGCNGLYEILRYKMHDAADPRAGEVFRKDIKKLSKSDAADPR
IGEVLQKDIKKMSKSEVDHRAGEVLEKDTKKLPKSDAAEPGAGEVLRKDNTNLSKLDAADPRAG
EVLRKD
IKRWSKSAGKPDGTGSRMGTSNIGMSSVGIPIRELLSLQSTSAENIRSFQQLEKLSIL
LIVSGYYDAVKSFKREILVSAETSELMKSLLHFIYSYANVLPLKALRQSGLAAEMRVFEIEKIV
SRKTIEKLLEEFNEITR

Similar gene clusters

Similar known gene clusters

NC_083348 - Cluster 56 - Fatty_acid-saccharide-alkaloid

Gene cluster description

NC_083348 - Gene Cluster 56. Type = fatty_acid-saccharide-alkaloid. Location: 77143755 - 77330542 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/fatty_acid: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))
plants/plant: (minimum(4,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083348 - Cluster 57 - Saccharide

Gene cluster description

NC_083348 - Gene Cluster 57. Type = saccharide. Location: 93633332 - 93766954 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083348 - Cluster 58 - Saccharide-polyketide

Gene cluster description

NC_083348 - Gene Cluster 58. Type = saccharide-polyketide. Location: 93792474 - 94088142 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/polyketide: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))
plants/saccharide: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_083348 - Cluster 59 - Saccharide

Gene cluster description

NC_083348 - Gene Cluster 59. Type = saccharide. Location: 101476120 - 101630620 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters