Identified secondary metabolite clusters

Cluster Type From To Size (kb) Core domains Product/substrate predicted by subgroup Most similar known cluster MIBiG BGC-ID
The following clusters are from record JBBPBL010000001.1:
Cluster 1Putative1517208153729120.08Transferase, p450---
Cluster 2Fatty_acid2133811219718163.37AMP-binding, Transferase, adh_short---
Cluster 3Saccharide1169835912317304618.952OG-FeII_Oxy, 3Beta_HSD, Cellulose_synt, DIOX_N, Epimerase---
Cluster 4Saccharide668189056691248593.582OG-FeII_Oxy, DIOX_N, UDPGT_2, p450---
The following clusters are from record JBBPBL010000002.1:
Cluster 5Saccharide132127911328488672.09UDPGT_2, p450flavonoid, oleananes--
Cluster 6Terpene1638058916648130267.54Terpene_synth, Terpene_synth_C---
Cluster 7Alkaloid3215602932700719544.69ADH_N, ADH_zinc_N, Bet_v_1, Epimerase---
Cluster 8Cyclopeptide6463432465153920519.60BURP---
Cluster 9Cyclopeptide6473418465274466540.28BURP---
Cluster 10Cyclopeptide6490143565337076435.64BURP---
The following clusters are from record JBBPBL010000003.1:
Cluster 11Terpene4462052449152129.47SQHop_cyclase_C, SQHop_cyclase_N, SQS_PSYlupeol-2--
Cluster 12Saccharide-Alkaloid611820566126776485.712OG-FeII_Oxy, DIOX_N, Str_synth, UDPGT_2---
The following clusters are from record JBBPBL010000004.1:
Cluster 13Saccharide63555673215096.59ADH_N_2, ADH_zinc_N, Aminotran_3, UDPGT_2carboxyl--
Cluster 14Terpene540017755408297381.20Terpene_synth, Terpene_synth_C---
The following clusters are from record JBBPBL010000005.1:
Cluster 15Cyclopeptide434099669502235.40BURP---
Cluster 16Saccharide27583643022028263.66ADH_N, ADH_zinc_N, UDPGT_2hydroxycinnamate-5--
Cluster 17Saccharide496350524971671081.66ABC_tran, Epimerase, Glyco_hydro_1---
Cluster 18Putative561177185619340775.69AMP-binding, Acetyltransf_1, His_biosynth, p450---
The following clusters are from record JBBPBL010000006.1:
Cluster 19Terpene85855768729251143.68DAHP_synth_1, Terpene_synth, Terpene_synth_C---
Cluster 20Saccharide489154434895542139.98Methyltransf_3, UDPGT_2flavonoid-3, oleananes-3--
Cluster 21Cyclopeptide5218798152489070301.09BURP---
Cluster 22Alkaloid541968955428208785.19Aldo_ket_red, Pyridoxal_deC, adh_short_C2, p450---
The following clusters are from record JBBPBL010000007.1:
Cluster 23Putative90795497150763.552OG-FeII_Oxy, DIOX_N, Transferase---
Cluster 24Transporter_associated-Terpene-Saccharide21322702317818185.55Glyco_hydro_1, LTP_2, Methyltransf_2, Prenyltrans, SQHop_cyclase_C, SQHop_cyclase_N, SQS_PSY, p450lupeol-2--
Cluster 25Cyclopeptide43220914620008297.92BURP---
Cluster 26Saccharide55222605635132112.872OG-FeII_Oxy, DIOX_N, Prenyltransf, UDPGT_2---
Cluster 27Fatty_acid5677926577684498.922OG-FeII_Oxy, DIOX_N, FA_desaturase, p450---
Cluster 28Fatty_acid-Saccharide5002562050233274207.65Cellulose_synt, FA_hydroxylase, adh_short---
The following clusters are from record JBBPBL010000008.1:
Cluster 29Putative2059119213293973.82AMP-binding, Acetyltransf_1, His_biosynth, p450---
Cluster 30Saccharide4083657840940420103.84ADH_N, ADH_zinc_N, UDPGT_2, p450---
The following clusters are from record JBBPBL010000009.1:
Cluster 31Cyclopeptide3411642034592939476.52BURP---
Cluster 32Saccharide4412260444236543113.94Cellulose_synt, Glyco_transf_28, Methyltransf_11, UDPGT, p450---
The following clusters are from record JBBPBL010000010.1:
Cluster 33Saccharide124429501249355150.60UDPGT_2, p450flavonoid, oleananes--
The following clusters are from record JBBPBL010000011.1:
Cluster 34Saccharide2255451823001895447.38ADH_N, ADH_zinc_N, UDPGT_2, p450---
Cluster 35Cyclopeptide4479119645607871816.67BURP---
The following clusters are from record JBBPBL010000012.1:
Cluster 36Putative10207811182460161.682OG-FeII_Oxy, DIOX_N, Transferase---
Cluster 37Terpene2489759252283933.08SQHop_cyclase_C, SQHop_cyclase_N, SQS_PSYlupeol-2--
Cluster 38Terpene29150063022915107.91MatE, Terpene_synth, Terpene_synth_C---
Cluster 39Transporter_associated-Saccharide4284209543057503215.41ABC_tran, Glyco_hydro_1, Glycos_transf_2, p450---
The following clusters are from record JBBPBL010000013.1:
Cluster 40Alkaloid3033264430487391154.75AMP-binding, Bet_v_1, p450---
Cluster 41Saccharide350560653514609490.03ADH_N_2, ADH_zinc_N, Aminotran_3, UDPGT_2carboxyl--
The following clusters are from record JBBPBL010000014.1:
Cluster 42Saccharide29532783088573135.292OG-FeII_Oxy, ADH_N, ADH_zinc_N, DIOX_N, Glycos_transf_1---
Cluster 43Saccharide85907968773727182.932OG-FeII_Oxy, DIOX_N, Glyco_hydro_1---
The following clusters are from record JBBPBL010000015.1:
Cluster 44Saccharide294708602954569974.84Cellulose_synt, Glyco_transf_28, Methyltransf_11, UDPGT---
Cluster 45Lignan348904903496116470.67Dirigent, p450---
Cluster 46Terpene354983343555379555.46PRISE, p450---
Cluster 47Saccharide379453223801960374.28Aminotran_1_2, UDPGT_2, p450-linamarin/lotaustralin (8% of genes show similarity)BGC0001316.4_c1
Cluster 48Polyketide398209863987115450.17Chal_sti_synt_C, FAE1_CUT1_RppA, Methyltransf_11, p450---
Cluster 49Fatty_acid408201084086044440.34Epimerase, FA_desaturase, p450---
Cluster 50Cyclopeptide4099940041289810290.41BURP---
Cluster 51Saccharide416767854173357756.79Epimerase, Glycos_transf_2, p450---
Cluster 52Cyclopeptide4187461042099708225.10BURP---
The following clusters are from record JBBPBL010000016.1:
Cluster 53Putative2050936214218591.25Epimerase, Transferase, p450---
The following clusters are from record JBBPBL010000017.1:
Cluster 54Saccharide13624742174440811.972OG-FeII_Oxy, DIOX_N, Glyco_hydro_1---
Cluster 55Alkaloid311653673120072935.36AMP-binding, Str_synth---
Cluster 56Saccharide378115053790640994.902OG-FeII_Oxy, DIOX_N, UDPGT_2, p450---
The following clusters are from record JBBPBL010000018.1:
Cluster 57Putative3102848731358622330.13His_biosynth, Methyltransf_7, p450---
Cluster 58Terpene-Polyketide359756223607190596.28Chal_sti_synt_C, E1_dh, Epimerase, Prenyltrans---
The following clusters are from record JBBPBL010000020.1:
Cluster 59Saccharide60452463841633.89Glyco_hydro_1, Methyltransf_11---
Cluster 60Alkaloid80017489164891.47Aldo_ket_red, Pyridoxal_deC, adh_short_C2, p450---
Cluster 61Cyclopeptide25501192817770267.65BURP, UDPGT_2---
Cluster 62Saccharide2806692283182725.14Aldo_ket_red, UDPGT_2---
The following clusters are from record JBBPBL010000021.1:
Cluster 63Lignan-Transporter_associated18839872032421148.43AMP-binding, Dirigent, Lycopene_cycl, MatE, Methyltransf_2---
Cluster 64Cyclopeptide20628152828382765.57BURP---
The following clusters are from record JBBPBL010000022.1:
Cluster 65Fatty_acid1439179814614976223.18Aminotran_1_2, FA_desaturase_2, adh_short---
Cluster 66Cyclopeptide15353914164243671070.45BURP---
The following clusters are from record JBBPBL010000023.1:
Cluster 67Saccharide241987002425249053.79ERG4_ERG24, Glycos_transf_2---
Cluster 68Saccharide276301572767224242.09Glycos_transf_1, adh_short, adh_short_C2-casbene/5a-hydroxy-casbene/5-keto-casbene/5-keto-7,8-epoxy... (11% of genes show similarity)BGC0002393.2_c1
The following clusters are from record JBBPBL010000024.1:
Cluster 69Alkaloid192087761926880960.03AMP-binding, Bet_v_1---
Cluster 70Putative2056542920893927328.50His_biosynth, Methyltransf_7---
The following clusters are from record JBBPBL010000025.1:
Cluster 71Fatty_acid2119896821576821377.852OG-FeII_Oxy, DIOX_N, ECH_2, Transferase---
Cluster 72Polyketide218728352196330490.472OG-FeII_Oxy, Acetyltransf_1, Chal_sti_synt_C, DIOX_N, FAE1_CUT1_RppA---
The following clusters are from record JBBPBL010000026.1:
Cluster 73Saccharide59190863608444.18Glycos_transf_1, Transferase---
The following clusters are from record JBBPBL010000027.1:
Cluster 74Fatty_acid2153016224371290.70AMP-binding, Transferase, adh_short---
Cluster 75Alkaloid5190935526400473.07Str_synth, p450---
The following clusters are from record JBBPBL010000028.1:
Cluster 76Cyclopeptide27876233117861330.24BURP---
The following clusters are from record JBBPBL010000029.1:
Cluster 77Cyclopeptide80726858456886384.20BURP---
Cluster 78Cyclopeptide80963128590321494.01BURP---
Cluster 79Putative91231169302790179.67Methyltransf_11, Transferase---
Cluster 80Cyclopeptide1528351716215016931.50BURP---
The following clusters are from record JBBPBL010000030.1:
Cluster 81Putative160768391611578238.942OG-FeII_Oxy, Amino_oxidase, DIOX_N, Methyltransf_11---
The following clusters are from record JBBPBL010000032.1:
Cluster 82Cyclopeptide596084896539300.45BURP---
Cluster 83Lignan9277011058413130.71AMP-binding, Dirigent, Methyltransf_7---
Cluster 84Saccharide144456751454242696.75Acetyltransf_1, Epimerase, UDPGT_2flavonoid--
Cluster 85Saccharide218395262189074051.21Cellulose_synt, Dimerisation, Methyltransf_2---
The following clusters are from record JBBPBL010000033.1:
Cluster 86Terpene60761206251450175.33Terpene_synth, Terpene_synth_C, p450---
The following clusters are from record JBBPBL010000034.1:
Cluster 87Polyketide69768475043152.75Chal_sti_synt_C, FAE1_CUT1_RppA, Methyltransf_11, p450---
Cluster 88Cyclopeptide19323122292490360.18BURP---
Cluster 89Saccharide2755844280117145.33Epimerase, Glycos_transf_2, p450---
Cluster 90Saccharide2989022306633377.31AMP-binding, Amino_oxidase, Lipoxygenase, UDPGT_2, p450---
Cluster 91Cyclopeptide31104043365855255.45BURP---
Cluster 92Saccharide5207654529584888.19UDPGT_2, adh_short_C2, p450---
Cluster 93Lignan102640611033309269.03Dirigent, p450---
Cluster 94Terpene109737641103969665.93PRISE, p450---
Cluster 95Fatty_acid193056091936438358.77Abhydrolase_3, FA_desaturase_2, adh_short---
The following clusters are from record JBBPBL010000036.1:
Cluster 96Saccharide54075058683046.08Epimerase, Glycos_transf_2, p450---
Cluster 97Saccharide78078783937058.58AMP-binding, Amino_oxidase, Lipoxygenase, UDPGT_2, p450---
Cluster 98Cyclopeptide8690871158569289.48BURP---
Cluster 99Polyketide104362261049782061.592OG-FeII_Oxy, Chal_sti_synt_C, Chal_sti_synt_N, DIOX_N, Methyltransf_11---
The following clusters are from record JBBPBL010000038.1:
Cluster 100Cyclopeptide311342490938179.60BURP---
Cluster 101Fatty_acid-Lignan63812368309044.97Dirigent, FA_desaturase, adh_short_C2---
Cluster 102Saccharide3004716306511560.40Cellulose_synt, Transferase---
Cluster 103Putative3401549348171480.172OG-FeII_Oxy, Chalcone, DIOX_N, polyprenyl_synt---
Cluster 104Cyclopeptide37687254026987258.26BURP---
Cluster 105Saccharide6360869638485023.98Glycos_transf_1, Transferase---
Cluster 106Putative9135428919619160.76Acetyltransf_1, Transferase, p450---
Cluster 107Putative1838016318529975149.81Transferase, p450---
The following clusters are from record JBBPBL010000039.1:
Cluster 108Fatty_acid1197086912090072119.20Aminotran_1_2, FA_desaturase_2, adh_short---
Cluster 109Cyclopeptide1386847114743034874.56BURP---
The following clusters are from record JBBPBL010000041.1:
Cluster 110Saccharide3218111328028262.17Aminotran_3, UDPGT_2carboxyl-2alpha-chaconine/alpha-solanine (9% of genes show similarity)BGC0002722.2_c1
Cluster 111Saccharide37525773975108222.53Acetyltransf_1, Amino_oxidase, Cellulose_synt, Methyltransf_11---
The following clusters are from record JBBPBL010000043.1:
Cluster 112Saccharide84370791126067.55ADH_N, ADH_zinc_N, Glyco_hydro_1, UDPGT_2*saccharide-3--
The following clusters are from record JBBPBL010000046.1:
Cluster 113Saccharide22097829301772.04Epimerase, Glycos_transf_2, NAD_binding_4, p450---
Cluster 114Cyclopeptide381650610607228.96BURP---
Cluster 115Fatty_acid669679780114110.44Aminotran_1_2, Epimerase, FA_hydroxylase, Methyltransf_11---
Cluster 116Saccharide992137102992437.79ABC2_membrane, ABC_tran, Aminotran_3, UDPGT_2---
Cluster 117Cyclopeptide73576157639242281.63BURP---
Cluster 118Saccharide1039373410507522113.79Acetyltransf_1, Amino_oxidase, Cellulose_synt, Methyltransf_11---
Cluster 119Cyclopeptide1261755312976317358.76BURP---
Cluster 120Saccharide1672849716847771119.27ADH_N_2, ADH_zinc_N, Aminotran_3, UDPGT_2carboxyl-2--
The following clusters are from record JBBPBL010000047.1:
Cluster 121Fatty_acid-Saccharide65621486840974278.83Cellulose_synt, FA_hydroxylase, adh_short---
The following clusters are from record JBBPBL010000048.1:
Cluster 122Saccharide45147615090721575.962OG-FeII_Oxy, Cellulose_synt, DIOX_N, Epimerase, p450---
The following clusters are from record JBBPBL010000049.1:
Cluster 123Cyclopeptide415421589414173.99BURP---
Cluster 124Saccharide23340172534190200.17ADH_N, ADH_zinc_N, UDPGT_2hydroxycinnamate-4, flavonoid-2, oleananes-2--
Cluster 125Cyclopeptide65965507018415421.87BURP---
Cluster 126Cyclopeptide12627688138013521173.66BURP---
The following clusters are from record JBBPBL010000052.1:
Cluster 127Cyclopeptide56941936051955357.76BURP---
Cluster 128Cyclopeptide1218743712593521406.08BURP---
The following clusters are from record JBBPBL010000053.1:
Cluster 129Alkaloid1108264911327380244.732OG-FeII_Oxy, AMP-binding, Epimerase, Orn_Arg_deC_N, Orn_DAP_Arg_deC---
Cluster 130Cyclopeptide1235682113245977889.16BURP---
The following clusters are from record JBBPBL010000054.1:
Cluster 131Putative23047062453833149.132OG-FeII_Oxy, DIOX_N, Epimerase, adh_short_C2, p450---
Cluster 132Terpene-Saccharide3245899331690271.002OG-FeII_Oxy, DIOX_N, Terpene_synth, Terpene_synth_C, UDPGT_2*saccharide--
Cluster 133Terpene6758909685667397.76Terpene_synth, Terpene_synth_C---
Cluster 134Saccharide6930333695615225.82UDPGT_2, adh_short, adh_short_C2flavonoid, oleananes--
The following clusters are from record JBBPBL010000057.1:
Cluster 135Cyclopeptide534123819800285.68BURP---
Cluster 136Lignan85007994814298.06AMP-binding, Dirigent, Methyltransf_7---
Cluster 137Saccharide3051761311601364.25Cellulose_synt, Dimerisation, Methyltransf_2---
The following clusters are from record JBBPBL010000059.1:
Cluster 138Cyclopeptide87992739565538766.26BURP-QS-21 (16% of genes show similarity)BGCMANUAL2.1_c1
The following clusters are from record JBBPBL010000061.1:
Cluster 139Cyclopeptide605732170637611006.44BURP---
Cluster 140Cyclopeptide633832276261041287.78BURP---
Cluster 141Cyclopeptide695727081277261170.46Aldo_ket_red, BURP, Dirigent, Lycopene_cycl, Orn_Arg_deC_N---
Cluster 142Cyclopeptide74757967981012505.22BURP---
Cluster 143Lignan79778668118641140.78Aldo_ket_red, Dirigent, Lycopene_cycl, Orn_Arg_deC_N---
The following clusters are from record JBBPBL010000063.1:
Cluster 144Cyclopeptide8519511703973852.02BURP---
Cluster 145Alkaloid41073604247465140.10AMP-binding, Bet_v_1, Peptidase_S10---
Cluster 146Cyclopeptide60223726371822349.45BURP---
Cluster 147Cyclopeptide1031613710504884188.75BURP---
The following clusters are from record JBBPBL010000064.1:
Cluster 148Terpene46600854859457199.37Acetyltransf_1, Epimerase, Terpene_synth, Terpene_synth_C---
Cluster 149Saccharide54938515691372197.52Glycos_transf_2, Transferase, p450---
The following clusters are from record JBBPBL010000065.1:
Cluster 150Putative75434337824818281.38Transferase, p450---
The following clusters are from record JBBPBL010000066.1:
Cluster 151Cyclopeptide681223683703911558.15BURP---
Cluster 152Cyclopeptide69375977723915786.32BURP---
Cluster 153Cyclopeptide82911829169391878.21BURP---
The following clusters are from record JBBPBL010000068.1:
Cluster 154Fatty_acid2439612252878089.17CER1-like_C, FA_hydroxylase, p450---
The following clusters are from record JBBPBL010000069.1:
Cluster 155Saccharide71079675273541.94DIOX_N, Glycos_transf_1, Transferase---
Cluster 156Saccharide2671271272928158.012OG-FeII_Oxy, DIOX_N, Transferase, UDPGT_2---
Cluster 157Cyclopeptide34300603740368310.31BURP---
Cluster 158Putative3737506383496597.46Acetyltransf_1, Transferase, p450---
Cluster 159Putative3981265405005768.79Glyco_transf_28, adh_short, adh_short_C2, p450---
Cluster 160Putative94537439593312139.57AMP-binding, Epimerase---
The following clusters are from record JBBPBL010000072.1:
Cluster 161Cyclopeptide8573231741658884.34BURP---
The following clusters are from record JBBPBL010000075.1:
Cluster 162Terpene476630585436108.81Peptidase_S10, Terpene_synth, Terpene_synth_C---
The following clusters are from record JBBPBL010000077.1:
Cluster 163Saccharide4111886412856516.68Abhydrolase_3, UDPGT_2flavonoid-2, oleananes-2--
The following clusters are from record JBBPBL010000079.1:
Cluster 164Alkaloid15404191714967174.55Bet_v_1, Peptidase_S10---
Cluster 165Cyclopeptide32447203507159262.44BURP---
Cluster 166Saccharide6036411606545129.04ADH_N, ADH_zinc_N, UDPGT_2hydroxycinnamate-3--
Cluster 167Cyclopeptide70829667317975235.01BURP---
The following clusters are from record JBBPBL010000080.1:
Cluster 168Fatty_acid363949543261179.312OG-FeII_Oxy, DIOX_N, ECH_2, Transferase---
Cluster 169Transporter_associated84760893690089.292OG-FeII_Oxy, ABC_tran, Acetyltransf_1, Chal_sti_synt_C, DIOX_N, FAE1_CUT1_RppA---
The following clusters are from record JBBPBL010000082.1:
Cluster 170Alkaloid57370975850446113.35Str_synth, p450---
The following clusters are from record JBBPBL010000083.1:
Cluster 171Terpene47657654191165.33Terpene_synth, Terpene_synth_C, p450---
Cluster 172Terpene-Saccharide37835563887500103.942OG-FeII_Oxy, DIOX_N, Terpene_synth, Terpene_synth_C, UDPGT_2*saccharide--
The following clusters are from record JBBPBL010000085.1:
Cluster 173Fatty_acid39296004074009144.412OG-FeII_Oxy, DIOX_N, Dimerisation, FA_desaturase, Methyltransf_2, p450---
Cluster 174Saccharide41497554293562143.812OG-FeII_Oxy, DIOX_N, Prenyltransf, UDPGT_2---
The following clusters are from record JBBPBL010000086.1:
Cluster 175Cyclopeptide6918031085847394.04BURP---
Cluster 176Saccharide1499575159127291.703Beta_HSD, Chalcone_2, Glycos_transf_1---
Cluster 177Transporter_associated-Terpene4673367475948786.12LTP_2, Methyltransf_2, SQHop_cyclase_C, SQHop_cyclase_N, SQS_PSY, p450lupeoltirucalla (26% of genes show similarity)BGC0001314.3_c1
The following clusters are from record JBBPBL010000091.1:
Cluster 178Saccharide-Polyketide1397600144292545.33Chal_sti_synt_C, FAE1_CUT1_RppA, UDPGT_2cytokinin-2--
Cluster 179Fatty_acid5113429520002786.60Aminotran_1_2, Epimerase, FA_hydroxylase, Methyltransf_11---
Cluster 180Cyclopeptide52644675514087249.62BURP---
The following clusters are from record JBBPBL010000092.1:
Cluster 181Cyclopeptide368849555994187.15BURP---
Cluster 182Fatty_acid-Lignan69041673678046.36Dirigent, FA_desaturase, adh_short_C2---
Cluster 183Putative3615933368947273.542OG-FeII_Oxy, Chalcone, DIOX_N, polyprenyl_synt---
Cluster 184Saccharide39984514101691103.24Amino_oxidase, Glyco_hydro_1, MatE, adh_short---
Cluster 185Cyclopeptide40348094311614276.81Amino_oxidase, BURP, Glyco_hydro_1---
The following clusters are from record JBBPBL010000099.1:
Cluster 186Saccharide58673167810091.37Aminotran_1_2, UDPGT_2, p450-linamarin/lotaustralin (8% of genes show similarity)BGC0001316.4_c1
Cluster 187Terpene3178267322702948.76Aminotran_3, PRISE, p450---
Cluster 188Lignan38078593927609119.75Dirigent, p450---
The following clusters are from record JBBPBL010000101.1:
Cluster 189Cyclopeptide37171934146425429.232OG-FeII_Oxy, BURP, Cu_amine_oxid, DIOX_N---
Cluster 190Alkaloid4075070412324748.182OG-FeII_Oxy, Cu_amine_oxid, DIOX_N---
The following clusters are from record JBBPBL010000108.1:
Cluster 191Alkaloid1568215163115962.94Aminotran_1_2, Pyridoxal_deC, adh_short---
Cluster 192Alkaloid44388154547830109.02Cu_amine_oxid, p450---
The following clusters are from record JBBPBL010000114.1:
Cluster 193Alkaloid2983122306187378.75Aminotran_1_2, Pyridoxal_deC, adh_short---
The following clusters are from record JBBPBL010000117.1:
Cluster 194Saccharide1155866155.87ADH_N_2, ADH_zinc_N, Aminotran_3, UDPGT_2carboxyl-6avenacin (16% of genes show similarity)BGCMANUAL1.1_c1
The following clusters are from record JBBPBL010000121.1:
Cluster 195Saccharide2426774252055193.78ADH_N, ADH_zinc_N, Glyco_hydro_1, UDPGT_2*saccharide-3--
The following clusters are from record JBBPBL010000123.1:
Cluster 196Fatty_acid-Saccharide2715100277539660.30Aminotran_1_2, FA_desaturase, UDPGT_2*saccharide--
The following clusters are from record JBBPBL010000124.1:
Cluster 197Terpene1965710205441588.70Terpene_synth, Terpene_synth_C, UbiA---
The following clusters are from record JBBPBL010000127.1:
Cluster 198Cyclopeptide7691191005667236.55BURP---
Cluster 199Saccharide1199446125041450.97Epimerase, Glycos_transf_2, p450---
Cluster 200Cyclopeptide17285721987151258.58BURP---
Cluster 201Fatty_acid2187958222935741.40Epimerase, FA_desaturase, p450---
The following clusters are from record JBBPBL010000128.1:
Cluster 202Alkaloid31604637712461.08Cu_amine_oxid, p450---
The following clusters are from record JBBPBL010000132.1:
Cluster 203Cyclopeptide15197151674282154.57BURP---
Cluster 204Fatty_acid-Saccharide18213072024567203.26AMP-binding, Epimerase, FA_hydroxylase, Glyco_hydro_1, Transferase---
The following clusters are from record JBBPBL010000135.1:
Cluster 205Fatty_acid225552327622102.07FA_desaturase_2, adh_short---
Cluster 206Cyclopeptide3048751290089985.21BURP, FA_desaturase_2, adh_short-QS-21 (16% of genes show similarity)BGCMANUAL2.1_c1
The following clusters are from record JBBPBL010000136.1:
Cluster 207Saccharide20753802230435155.062OG-FeII_Oxy, ADH_N, ADH_zinc_N, DIOX_N, Glycos_transf_1---
The following clusters are from record JBBPBL010000151.1:
Cluster 208Saccharide57026066516494.903Beta_HSD, Chalcone_2, Glycos_transf_1---
Cluster 209Cyclopeptide10723831414308341.93BURP---
Cluster 210Putative1519330160599986.67Abhydrolase_3, Transferase---
The following clusters are from record JBBPBL010000157.1:
Cluster 211Alkaloid7717217610298.93Aldo_ket_red, Pyridoxal_deC, adh_short---
The following clusters are from record JBBPBL010000166.1:
Cluster 212Polyketide243447835554.01Chal_sti_synt_C, FAE1_CUT1_RppA, Methyltransf_11, p450---
Cluster 213Cyclopeptide12795611517334237.77BURP---
The following clusters are from record JBBPBL010000172.1:
Cluster 214Cyclopeptide360878611659250.78BURP---
The following clusters are from record JBBPBL010000192.1:
Cluster 215Cyclopeptide171077536840365.76BURP---
The following clusters are from record JBBPBL010000366.1:
Cluster 216Cyclopeptide16235962.36BURP---

JBBPBL010000001 - Cluster 1 - Putative

Gene cluster description

Download cluster GenBank file
JBBPBL010000001 - Gene Cluster 1. Type = putative. Location: 1517208 - 1537291 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000001 - Cluster 2 - Fatty_acid

Gene cluster description

Download cluster GenBank file
JBBPBL010000001 - Gene Cluster 2. Type = fatty_acid. Location: 2133811 - 2197181 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000001 - Cluster 3 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000001 - Gene Cluster 3. Type = saccharide. Location: 11698359 - 12317304 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000001 - Cluster 4 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000001 - Gene Cluster 4. Type = saccharide. Location: 66818905 - 66912485 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000002 - Cluster 5 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000002 - Gene Cluster 5. Type = saccharide. Location: 13212791 - 13284886 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000002 - Cluster 6 - Terpene

Gene cluster description

Download cluster GenBank file
JBBPBL010000002 - Gene Cluster 6. Type = terpene. Location: 16380589 - 16648130 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000002 - Cluster 7 - Alkaloid

Gene cluster description

Download cluster GenBank file
JBBPBL010000002 - Gene Cluster 7. Type = alkaloid. Location: 32156029 - 32700719 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000002 - Cluster 8 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000002 - Gene Cluster 8. Type = cyclopeptide. Location: 64634324 - 65153920 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_149542
Repeat occurs 14 times in a sequence of 406 amino acids
Location between 64856997 and 64858380
Coverage of 51.72 %
Instances:
KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ | KDFDPNRPQYYYLSL | KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ
KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ
KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ |
pattern: KDFDPNRPQY[NY]YLS[LQ]
MLVKAATMKPSLAFFALLGLLLFAETIAARKAPDEGSNDEMKEKTMPQADKSFLKDFDPNRPQ
YNYLSQEAMKNAFFKDFDPNRPQYNYLSQEAMNNAFLKDFDPNRPQYYYLSLEAMNNAFLKDFD
PNRPQYNYLSQEAMKNAFLKDFDPNRPQYNYLSQEAMKNAFFKDFDPNRPQYNYLSQEVMKNAF
FKDFDPNRPQYNYLSQEAMKNAFLKDFDPNRPQYNYLSQEAMKNAFLKDFDPNRPQYNYLSQEA
MKNAFLKDFDPNRPQYNYLSQEAMKNAFLKDFDPNRPQYNYLSQEAMKNAFLKDFDPNRPQYNY
LSQEAMKNAFLKDFDPNRPQYNYLSQEAMKNAFLKDFDPNRPQYNYLSQEAMNSLKKNDQSHDA
ENKDDKSQETKASVVMELAKSVL
Repeat found in V6N13_149549
Repeat occurs 15 times in a sequence of 409 amino acids
Location between 64940399 and 64941629
Coverage of 55.01 %
Instances:
KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ
KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ
KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ | KDFDLNRPQYNYLSQ | KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ

pattern: KDFD[LP]NRPQYNYLSQ
MQFAETIAARKAPDEGCHDEMKEKTMPQADKSFLKDFDPNRPQYNYLSQDAMKNAFIKDFDPN
RPQYNYLSQEAMKNAFMKDFDPNRPQYNYLSQETMKNAFLKDFDPNRPQYNYLSQETMKNAFLK
DFDPNRPQYNYLSQEAMNNAFLKDFDPNRPQYNYLSQEAMKNAFLKDFDPNRPQYNYLSQEAMK
NAFLKDFDPNRPQYNYLSQEAMNNAFLKDFDPNRPQYNYLSQEAMKNNFLKDFDPNRPQYNYLS
QEAMTNAFLKDFDPNRPQYNYLSQEAMKNAFLKDFDPNRPQYNYLSQEAMKNAFLKDFDLNRPQ
YNYLSQEATKNAFLKDFDPNRPQYNYLSQEAMKNAYLKDFDPNRPQYNYLSQEAMNSIKKNNES
HDTENKDDKSQETKTSVIVELAKSVL
Repeat found in V6N13_149552
Repeat occurs 13 times in a sequence of 357 amino acids
Location between 64972246 and 64973463
Coverage of 54.62 %
Instances:
FDPNRPQYNYLSQEV | FDPNRPQYNYISQEA | FDPNRPQYNYLSQEA | FDPNRPQYNYLSQEA | FDPNRPQYNYLSQEA
FDPNRPQYNYLSQEA | FDPNRPQYNYLSQEA | FDPNRPQYNYLSQEA | FDPNRPQYNYLSQEA | FDPNRPQYNYLSQEA
FDPNRPQYNYLSQEA | FDPNRPQYNYLSQEA | FDPNRPQYNYLSQEA |
pattern: FDPNRPQYNY[LI]SQE[AV]
MLVKAATMKPSLAFFALLGLLLFAETIAARKAPEEGSNDEMKEKTMPQADKSFLKDFDPNRPQ
YNYLSQEVMKNAFLKDFDPNRPQYNYISQEAMKNAFLKDFDPNRPQYNYLSQEAMKNAFLKDFD
PNRPQYNYLSQEAMKNAFLKDFDPNRPQYNYLSQEAMKNAFLKDFDPNRPQYNYLSQEAMKNTF
LKDFDPNRPQYNYLSQEAMKNAFLKDFDPNRPQYNYLSQEAMKNAFLKDFDPNRPQYNYLSQEA
MKNAFLNDFDPNRPQYNYLSQEAMKNGFLKDFDPNRPQYNYLSQEAMKNTFLKDFDPNRPQYNY
LSQEAMKNAFLKEFDPNRPQYNYLSQEAMNSLKKDETA
Repeat found in V6N13_149554
Repeat occurs 23 times in a sequence of 751 amino acids
Location between 65040357 and 65049796
Coverage of 45.94 %
Instances:
KNVEQGSVINSVPIL | KNVEQGSVINPIPVF | KNVEQGSVINPIPVF | KNVEQGSVINPIPVF | KNVEQGSVINPIPVF
KNVEQGSVINPIPVF | KNVEQGSVINPIPVF | KNVEQGSVINPIPVF | KNVEQGSVINPIPVF | KNVEQGSVINPIPVF
KNVEQGSVINPIPVF | KNVEQGSVINPIPVF | KNVEQGSVINPIPVF | KNVEQGSVINPIPVF | KNVEQGSVINPIPVF
KNVEQGSVKNPIPVF | KNVEQGSVINPIPVF | KNVEQGSVINPIPVF | KNVEQGSVINPIPVF | KNVEQGSVINPIPVF
KNVEQGSVINPIPVF | KNVEQGSVINPIPVF | KNVEHGSVINSVPIL |
pattern: KNVE[QH]GSV[KI]N[SP][VI]P[VI][LF]
MKATLAFLAFICILLFTKTIAARHAPGQEYNDETKNVEQGSVINSVPILYYPKNDDGQEMKNV
EQGSVINPIPVFYYPKKDDGQEMKNVEQGSVINPIPVFYYPKKDDGQEMKNVEQGSVINPIPVF
YYPKKDDGQEMKNVEQGSVINPIPVFYYPKKDDGQEMKNVEQGSVINPIPVFYYPKKDDGQEMK
NVEQGSVINPIPVFYYPKKDDGQEMKNVEQGSVINPIPVFYYPKKDDGQEMKNVEQGSVINPIP
VFYYPKKDDGQEMKNVEQGSVINPIPVFYYPKKDDGQEMKNVEQGSVINPIPVFYYPKKDDGQE
MKNVEQGSVINPIPVFYYPKKDDGQEMKNVEQGSVINPIPVFYYPKKDDGQEMKNVEQGSVINP
IPVFYYPKKDDGQEMKNVEQGSVINPIPVFYYPKKDDGQEMKNVEQGSVKNPIPVFYYPKKDDG
QEMKNVEQGSVINPIPVFYYPKKDDGQQMKNVEQGSVINPIPVFYYPKKDDGQKMKNVEQGSVI
NPIPVFYYPKKDDGQEMKNVEQGSVINPIPVFYYPKKDDGQEMKNVEQGSVINPIPVFYYPKKD
DGQEMKNVEQGSVINPIPVFYYPKKDDDQEMKNVEHGSVINSVPILYYPKKDELFDATSVPVQH
QQDHINAGEVTQPGLHAEFSHSPLDDRTDEEGVLQVQQDVMPRVESDQPLLQSYEVSRSGSCHL
ESASSQQTTPIACVNDNAEGTMAEEAIGEEKKHEIFFSVLPLLGPTSS
Repeat found in V6N13_149561
Repeat occurs 8 times in a sequence of 356 amino acids
Location between 65111137 and 65112304
Coverage of 33.71 %
Instances:
SFVKDFDPNRPQFPI | SFVKDFDPNRPQFPI | SFVKDFDPNRPQFPI | SFVKDFDPNRPQFPI | SFVKDFIPNRPQFPF
SFVKDFLPNRPQFPI | SFVKNFDPNRPQFPI | SFVKNFDPNRPQFPI |
pattern: SFVK[ND]F[LDI]PNRPQFP[FI]
MESFFSFLALFCILLSAKTITARQDPGRQWTDATKEQPVAEATKTSEHESFVKDFDPNRPQFP
IYLTYMQKDGQSQEAARTDKSFVKDFDPNRPQFPIYLTYMQKDGQYQEAARTDKSFVKDFDPNR
PQFPIYLTYMQKDGQSQEAARTDKSFVKDFDPNRPQFPIYLTYMQKDGQSQEAAGTDKSFVKDF
IPNRPQFPFYGYMRKDGQSQEAAGNDKSFVKDFLPNRPQFPIYLTYMQKDSQSQEAAGTDKSFV
KNFDPNRPQFPIYLTYMQKDGQSQEASGIDKSFVKNFDPNRPQFPIYLTYMQKDDQSQEATENI
KHPHYTINWLANSLQRPWGFHSFKQRLMLWLVIFHPV

Similar gene clusters

JBBPBL010000002 - Cluster 9 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000002 - Gene Cluster 9. Type = cyclopeptide. Location: 64734184 - 65274466 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_149542
Repeat occurs 14 times in a sequence of 406 amino acids
Location between 64856997 and 64858380
Coverage of 51.72 %
Instances:
KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ | KDFDPNRPQYYYLSL | KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ
KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ
KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ |
pattern: KDFDPNRPQY[NY]YLS[LQ]
MLVKAATMKPSLAFFALLGLLLFAETIAARKAPDEGSNDEMKEKTMPQADKSFLKDFDPNRPQ
YNYLSQEAMKNAFFKDFDPNRPQYNYLSQEAMNNAFLKDFDPNRPQYYYLSLEAMNNAFLKDFD
PNRPQYNYLSQEAMKNAFLKDFDPNRPQYNYLSQEAMKNAFFKDFDPNRPQYNYLSQEVMKNAF
FKDFDPNRPQYNYLSQEAMKNAFLKDFDPNRPQYNYLSQEAMKNAFLKDFDPNRPQYNYLSQEA
MKNAFLKDFDPNRPQYNYLSQEAMKNAFLKDFDPNRPQYNYLSQEAMKNAFLKDFDPNRPQYNY
LSQEAMKNAFLKDFDPNRPQYNYLSQEAMKNAFLKDFDPNRPQYNYLSQEAMNSLKKNDQSHDA
ENKDDKSQETKASVVMELAKSVL
Repeat found in V6N13_149549
Repeat occurs 15 times in a sequence of 409 amino acids
Location between 64940399 and 64941629
Coverage of 55.01 %
Instances:
KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ
KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ
KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ | KDFDLNRPQYNYLSQ | KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ

pattern: KDFD[LP]NRPQYNYLSQ
MQFAETIAARKAPDEGCHDEMKEKTMPQADKSFLKDFDPNRPQYNYLSQDAMKNAFIKDFDPN
RPQYNYLSQEAMKNAFMKDFDPNRPQYNYLSQETMKNAFLKDFDPNRPQYNYLSQETMKNAFLK
DFDPNRPQYNYLSQEAMNNAFLKDFDPNRPQYNYLSQEAMKNAFLKDFDPNRPQYNYLSQEAMK
NAFLKDFDPNRPQYNYLSQEAMNNAFLKDFDPNRPQYNYLSQEAMKNNFLKDFDPNRPQYNYLS
QEAMTNAFLKDFDPNRPQYNYLSQEAMKNAFLKDFDPNRPQYNYLSQEAMKNAFLKDFDLNRPQ
YNYLSQEATKNAFLKDFDPNRPQYNYLSQEAMKNAYLKDFDPNRPQYNYLSQEAMNSIKKNNES
HDTENKDDKSQETKTSVIVELAKSVL
Repeat found in V6N13_149552
Repeat occurs 13 times in a sequence of 357 amino acids
Location between 64972246 and 64973463
Coverage of 54.62 %
Instances:
FDPNRPQYNYLSQEV | FDPNRPQYNYISQEA | FDPNRPQYNYLSQEA | FDPNRPQYNYLSQEA | FDPNRPQYNYLSQEA
FDPNRPQYNYLSQEA | FDPNRPQYNYLSQEA | FDPNRPQYNYLSQEA | FDPNRPQYNYLSQEA | FDPNRPQYNYLSQEA
FDPNRPQYNYLSQEA | FDPNRPQYNYLSQEA | FDPNRPQYNYLSQEA |
pattern: FDPNRPQYNY[LI]SQE[AV]
MLVKAATMKPSLAFFALLGLLLFAETIAARKAPEEGSNDEMKEKTMPQADKSFLKDFDPNRPQ
YNYLSQEVMKNAFLKDFDPNRPQYNYISQEAMKNAFLKDFDPNRPQYNYLSQEAMKNAFLKDFD
PNRPQYNYLSQEAMKNAFLKDFDPNRPQYNYLSQEAMKNAFLKDFDPNRPQYNYLSQEAMKNTF
LKDFDPNRPQYNYLSQEAMKNAFLKDFDPNRPQYNYLSQEAMKNAFLKDFDPNRPQYNYLSQEA
MKNAFLNDFDPNRPQYNYLSQEAMKNGFLKDFDPNRPQYNYLSQEAMKNTFLKDFDPNRPQYNY
LSQEAMKNAFLKEFDPNRPQYNYLSQEAMNSLKKDETA
Repeat found in V6N13_149554
Repeat occurs 23 times in a sequence of 751 amino acids
Location between 65040357 and 65049796
Coverage of 45.94 %
Instances:
KNVEQGSVINSVPIL | KNVEQGSVINPIPVF | KNVEQGSVINPIPVF | KNVEQGSVINPIPVF | KNVEQGSVINPIPVF
KNVEQGSVINPIPVF | KNVEQGSVINPIPVF | KNVEQGSVINPIPVF | KNVEQGSVINPIPVF | KNVEQGSVINPIPVF
KNVEQGSVINPIPVF | KNVEQGSVINPIPVF | KNVEQGSVINPIPVF | KNVEQGSVINPIPVF | KNVEQGSVINPIPVF
KNVEQGSVKNPIPVF | KNVEQGSVINPIPVF | KNVEQGSVINPIPVF | KNVEQGSVINPIPVF | KNVEQGSVINPIPVF
KNVEQGSVINPIPVF | KNVEQGSVINPIPVF | KNVEHGSVINSVPIL |
pattern: KNVE[QH]GSV[KI]N[SP][VI]P[VI][LF]
MKATLAFLAFICILLFTKTIAARHAPGQEYNDETKNVEQGSVINSVPILYYPKNDDGQEMKNV
EQGSVINPIPVFYYPKKDDGQEMKNVEQGSVINPIPVFYYPKKDDGQEMKNVEQGSVINPIPVF
YYPKKDDGQEMKNVEQGSVINPIPVFYYPKKDDGQEMKNVEQGSVINPIPVFYYPKKDDGQEMK
NVEQGSVINPIPVFYYPKKDDGQEMKNVEQGSVINPIPVFYYPKKDDGQEMKNVEQGSVINPIP
VFYYPKKDDGQEMKNVEQGSVINPIPVFYYPKKDDGQEMKNVEQGSVINPIPVFYYPKKDDGQE
MKNVEQGSVINPIPVFYYPKKDDGQEMKNVEQGSVINPIPVFYYPKKDDGQEMKNVEQGSVINP
IPVFYYPKKDDGQEMKNVEQGSVINPIPVFYYPKKDDGQEMKNVEQGSVKNPIPVFYYPKKDDG
QEMKNVEQGSVINPIPVFYYPKKDDGQQMKNVEQGSVINPIPVFYYPKKDDGQKMKNVEQGSVI
NPIPVFYYPKKDDGQEMKNVEQGSVINPIPVFYYPKKDDGQEMKNVEQGSVINPIPVFYYPKKD
DGQEMKNVEQGSVINPIPVFYYPKKDDDQEMKNVEHGSVINSVPILYYPKKDELFDATSVPVQH
QQDHINAGEVTQPGLHAEFSHSPLDDRTDEEGVLQVQQDVMPRVESDQPLLQSYEVSRSGSCHL
ESASSQQTTPIACVNDNAEGTMAEEAIGEEKKHEIFFSVLPLLGPTSS
Repeat found in V6N13_149561
Repeat occurs 8 times in a sequence of 356 amino acids
Location between 65111137 and 65112304
Coverage of 33.71 %
Instances:
SFVKDFDPNRPQFPI | SFVKDFDPNRPQFPI | SFVKDFDPNRPQFPI | SFVKDFDPNRPQFPI | SFVKDFIPNRPQFPF
SFVKDFLPNRPQFPI | SFVKNFDPNRPQFPI | SFVKNFDPNRPQFPI |
pattern: SFVK[ND]F[LDI]PNRPQFP[FI]
MESFFSFLALFCILLSAKTITARQDPGRQWTDATKEQPVAEATKTSEHESFVKDFDPNRPQFP
IYLTYMQKDGQSQEAARTDKSFVKDFDPNRPQFPIYLTYMQKDGQYQEAARTDKSFVKDFDPNR
PQFPIYLTYMQKDGQSQEAARTDKSFVKDFDPNRPQFPIYLTYMQKDGQSQEAAGTDKSFVKDF
IPNRPQFPFYGYMRKDGQSQEAAGNDKSFVKDFLPNRPQFPIYLTYMQKDSQSQEAAGTDKSFV
KNFDPNRPQFPIYLTYMQKDGQSQEASGIDKSFVKNFDPNRPQFPIYLTYMQKDDQSQEATENI
KHPHYTINWLANSLQRPWGFHSFKQRLMLWLVIFHPV
Repeat found in V6N13_149571
Repeat occurs 14 times in a sequence of 474 amino acids
Location between 65172239 and 65173664
Coverage of 35.44 %
Instances:
DFERPIRPKGDE | DFEPRPSVTAYV | DFEPKPSVTTYG | DFEPRPSVTAYG | DFEPRPSVTAYG
DFEQKPSVTAYD | DFEPRPSVTAYG | DFEPRPGPSVTA | DFEPRPSVTAYG | DFEPRPSVTTYD
DFELRPSVTAYG | DFESRPSVTAYG | DFEPKSNVTSYI | DFEPRPSVTSYS |
pattern: DFE[QLRSP][KRP][PSI][SGRN][VP][SKT][GTASV][TDY][GDIEASV]
The following known motifs were found:
FEPR was found 10 times in this sequence
MQFADTLSAGRKDAGEYWRVVMKDQPMPEALMELVRVEAASVGSEEKTERGTPASIELLKEEK
IIVEDFERPIRPKGDEKKSTFSDDFEPRPSVTAYVPSVTAYVDGEKSSPFAEDFEPKPSVTTYG
SDDAGLKGKKPFAGDFEPRPSVTAYGPSVTAYGDNDVGLKGEKKSFTDDFEPRPSVTAYGPSVT
AYGGDDAGLKGEKKPFTNDFEQKPSVTAYDDDGAGLKGEKKSFTNDFEPRPSVTAYGPSVTAYG
GDDGGLKGEKKSFTNDFEPRPGPSVTAPGPSVTAYGSDDCGLKGEKKSFTNDFEPRPSVTAYGP
SVTAYGGDDAGLKGEEKSFTNGFEPRPSVTAYGGDDIGLKGEKKSFTNDFEPRPSVTTYDPSVT
TYDGDDADLKGEKKSFTNDFELRPSVTAYGGDDVGLKGEKKSFTNDFESRPSVTAYGANDANLK
GKKKSFTSVFEPRPSVTSYVSSDFEPKSNVTSYISSDFEPRPSVTSYSRGDVDLIGVKKSLVIL
NQRQPAAFTRIA

Similar gene clusters

JBBPBL010000002 - Cluster 10 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000002 - Gene Cluster 10. Type = cyclopeptide. Location: 64901435 - 65337076 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_149549
Repeat occurs 15 times in a sequence of 409 amino acids
Location between 64940399 and 64941629
Coverage of 55.01 %
Instances:
KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ
KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ
KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ | KDFDLNRPQYNYLSQ | KDFDPNRPQYNYLSQ | KDFDPNRPQYNYLSQ

pattern: KDFD[LP]NRPQYNYLSQ
MQFAETIAARKAPDEGCHDEMKEKTMPQADKSFLKDFDPNRPQYNYLSQDAMKNAFIKDFDPN
RPQYNYLSQEAMKNAFMKDFDPNRPQYNYLSQETMKNAFLKDFDPNRPQYNYLSQETMKNAFLK
DFDPNRPQYNYLSQEAMNNAFLKDFDPNRPQYNYLSQEAMKNAFLKDFDPNRPQYNYLSQEAMK
NAFLKDFDPNRPQYNYLSQEAMNNAFLKDFDPNRPQYNYLSQEAMKNNFLKDFDPNRPQYNYLS
QEAMTNAFLKDFDPNRPQYNYLSQEAMKNAFLKDFDPNRPQYNYLSQEAMKNAFLKDFDLNRPQ
YNYLSQEATKNAFLKDFDPNRPQYNYLSQEAMKNAYLKDFDPNRPQYNYLSQEAMNSIKKNNES
HDTENKDDKSQETKTSVIVELAKSVL
Repeat found in V6N13_149552
Repeat occurs 13 times in a sequence of 357 amino acids
Location between 64972246 and 64973463
Coverage of 54.62 %
Instances:
FDPNRPQYNYLSQEV | FDPNRPQYNYISQEA | FDPNRPQYNYLSQEA | FDPNRPQYNYLSQEA | FDPNRPQYNYLSQEA
FDPNRPQYNYLSQEA | FDPNRPQYNYLSQEA | FDPNRPQYNYLSQEA | FDPNRPQYNYLSQEA | FDPNRPQYNYLSQEA
FDPNRPQYNYLSQEA | FDPNRPQYNYLSQEA | FDPNRPQYNYLSQEA |
pattern: FDPNRPQYNY[LI]SQE[AV]
MLVKAATMKPSLAFFALLGLLLFAETIAARKAPEEGSNDEMKEKTMPQADKSFLKDFDPNRPQ
YNYLSQEVMKNAFLKDFDPNRPQYNYISQEAMKNAFLKDFDPNRPQYNYLSQEAMKNAFLKDFD
PNRPQYNYLSQEAMKNAFLKDFDPNRPQYNYLSQEAMKNAFLKDFDPNRPQYNYLSQEAMKNTF
LKDFDPNRPQYNYLSQEAMKNAFLKDFDPNRPQYNYLSQEAMKNAFLKDFDPNRPQYNYLSQEA
MKNAFLNDFDPNRPQYNYLSQEAMKNGFLKDFDPNRPQYNYLSQEAMKNTFLKDFDPNRPQYNY
LSQEAMKNAFLKEFDPNRPQYNYLSQEAMNSLKKDETA
Repeat found in V6N13_149554
Repeat occurs 23 times in a sequence of 751 amino acids
Location between 65040357 and 65049796
Coverage of 45.94 %
Instances:
KNVEQGSVINSVPIL | KNVEQGSVINPIPVF | KNVEQGSVINPIPVF | KNVEQGSVINPIPVF | KNVEQGSVINPIPVF
KNVEQGSVINPIPVF | KNVEQGSVINPIPVF | KNVEQGSVINPIPVF | KNVEQGSVINPIPVF | KNVEQGSVINPIPVF
KNVEQGSVINPIPVF | KNVEQGSVINPIPVF | KNVEQGSVINPIPVF | KNVEQGSVINPIPVF | KNVEQGSVINPIPVF
KNVEQGSVKNPIPVF | KNVEQGSVINPIPVF | KNVEQGSVINPIPVF | KNVEQGSVINPIPVF | KNVEQGSVINPIPVF
KNVEQGSVINPIPVF | KNVEQGSVINPIPVF | KNVEHGSVINSVPIL |
pattern: KNVE[QH]GSV[KI]N[SP][VI]P[VI][LF]
MKATLAFLAFICILLFTKTIAARHAPGQEYNDETKNVEQGSVINSVPILYYPKNDDGQEMKNV
EQGSVINPIPVFYYPKKDDGQEMKNVEQGSVINPIPVFYYPKKDDGQEMKNVEQGSVINPIPVF
YYPKKDDGQEMKNVEQGSVINPIPVFYYPKKDDGQEMKNVEQGSVINPIPVFYYPKKDDGQEMK
NVEQGSVINPIPVFYYPKKDDGQEMKNVEQGSVINPIPVFYYPKKDDGQEMKNVEQGSVINPIP
VFYYPKKDDGQEMKNVEQGSVINPIPVFYYPKKDDGQEMKNVEQGSVINPIPVFYYPKKDDGQE
MKNVEQGSVINPIPVFYYPKKDDGQEMKNVEQGSVINPIPVFYYPKKDDGQEMKNVEQGSVINP
IPVFYYPKKDDGQEMKNVEQGSVINPIPVFYYPKKDDGQEMKNVEQGSVKNPIPVFYYPKKDDG
QEMKNVEQGSVINPIPVFYYPKKDDGQQMKNVEQGSVINPIPVFYYPKKDDGQKMKNVEQGSVI
NPIPVFYYPKKDDGQEMKNVEQGSVINPIPVFYYPKKDDGQEMKNVEQGSVINPIPVFYYPKKD
DGQEMKNVEQGSVINPIPVFYYPKKDDDQEMKNVEHGSVINSVPILYYPKKDELFDATSVPVQH
QQDHINAGEVTQPGLHAEFSHSPLDDRTDEEGVLQVQQDVMPRVESDQPLLQSYEVSRSGSCHL
ESASSQQTTPIACVNDNAEGTMAEEAIGEEKKHEIFFSVLPLLGPTSS
Repeat found in V6N13_149561
Repeat occurs 8 times in a sequence of 356 amino acids
Location between 65111137 and 65112304
Coverage of 33.71 %
Instances:
SFVKDFDPNRPQFPI | SFVKDFDPNRPQFPI | SFVKDFDPNRPQFPI | SFVKDFDPNRPQFPI | SFVKDFIPNRPQFPF
SFVKDFLPNRPQFPI | SFVKNFDPNRPQFPI | SFVKNFDPNRPQFPI |
pattern: SFVK[ND]F[LDI]PNRPQFP[FI]
MESFFSFLALFCILLSAKTITARQDPGRQWTDATKEQPVAEATKTSEHESFVKDFDPNRPQFP
IYLTYMQKDGQSQEAARTDKSFVKDFDPNRPQFPIYLTYMQKDGQYQEAARTDKSFVKDFDPNR
PQFPIYLTYMQKDGQSQEAARTDKSFVKDFDPNRPQFPIYLTYMQKDGQSQEAAGTDKSFVKDF
IPNRPQFPFYGYMRKDGQSQEAAGNDKSFVKDFLPNRPQFPIYLTYMQKDSQSQEAAGTDKSFV
KNFDPNRPQFPIYLTYMQKDGQSQEASGIDKSFVKNFDPNRPQFPIYLTYMQKDDQSQEATENI
KHPHYTINWLANSLQRPWGFHSFKQRLMLWLVIFHPV
Repeat found in V6N13_149571
Repeat occurs 14 times in a sequence of 474 amino acids
Location between 65172239 and 65173664
Coverage of 35.44 %
Instances:
DFERPIRPKGDE | DFEPRPSVTAYV | DFEPKPSVTTYG | DFEPRPSVTAYG | DFEPRPSVTAYG
DFEQKPSVTAYD | DFEPRPSVTAYG | DFEPRPGPSVTA | DFEPRPSVTAYG | DFEPRPSVTTYD
DFELRPSVTAYG | DFESRPSVTAYG | DFEPKSNVTSYI | DFEPRPSVTSYS |
pattern: DFE[QLRSP][KRP][PSI][SGRN][VP][SKT][GTASV][TDY][GDIEASV]
The following known motifs were found:
FEPR was found 10 times in this sequence
MQFADTLSAGRKDAGEYWRVVMKDQPMPEALMELVRVEAASVGSEEKTERGTPASIELLKEEK
IIVEDFERPIRPKGDEKKSTFSDDFEPRPSVTAYVPSVTAYVDGEKSSPFAEDFEPKPSVTTYG
SDDAGLKGKKPFAGDFEPRPSVTAYGPSVTAYGDNDVGLKGEKKSFTDDFEPRPSVTAYGPSVT
AYGGDDAGLKGEKKPFTNDFEQKPSVTAYDDDGAGLKGEKKSFTNDFEPRPSVTAYGPSVTAYG
GDDGGLKGEKKSFTNDFEPRPGPSVTAPGPSVTAYGSDDCGLKGEKKSFTNDFEPRPSVTAYGP
SVTAYGGDDAGLKGEEKSFTNGFEPRPSVTAYGGDDIGLKGEKKSFTNDFEPRPSVTTYDPSVT
TYDGDDADLKGEKKSFTNDFELRPSVTAYGGDDVGLKGEKKSFTNDFESRPSVTAYGANDANLK
GKKKSFTSVFEPRPSVTSYVSSDFEPKSNVTSYISSDFEPRPSVTSYSRGDVDLIGVKKSLVIL
NQRQPAAFTRIA

Similar gene clusters

JBBPBL010000003 - Cluster 11 - Terpene

Gene cluster description

Download cluster GenBank file
JBBPBL010000003 - Gene Cluster 11. Type = terpene. Location: 4462052 - 4491521 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000003 - Cluster 12 - Saccharide-alkaloid

Gene cluster description

Download cluster GenBank file
JBBPBL010000003 - Gene Cluster 12. Type = saccharide-alkaloid. Location: 61182056 - 61267764 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000004 - Cluster 13 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000004 - Gene Cluster 13. Type = saccharide. Location: 635556 - 732150 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000004 - Cluster 14 - Terpene

Gene cluster description

Download cluster GenBank file
JBBPBL010000004 - Gene Cluster 14. Type = terpene. Location: 54001775 - 54082973 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000005 - Cluster 15 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000005 - Gene Cluster 15. Type = cyclopeptide. Location: 434099 - 669502 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

No repeats detected in this cluster.

Similar gene clusters

JBBPBL010000005 - Cluster 16 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000005 - Gene Cluster 16. Type = saccharide. Location: 2758364 - 3022028 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000005 - Cluster 17 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000005 - Gene Cluster 17. Type = saccharide. Location: 49635052 - 49716710 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000005 - Cluster 18 - Putative

Gene cluster description

Download cluster GenBank file
JBBPBL010000005 - Gene Cluster 18. Type = putative. Location: 56117718 - 56193407 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000006 - Cluster 19 - Terpene

Gene cluster description

Download cluster GenBank file
JBBPBL010000006 - Gene Cluster 19. Type = terpene. Location: 8585576 - 8729251 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000006 - Cluster 20 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000006 - Gene Cluster 20. Type = saccharide. Location: 48915443 - 48955421 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000006 - Cluster 21 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000006 - Gene Cluster 21. Type = cyclopeptide. Location: 52187981 - 52489070 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_115453
Repeat occurs 3 times in a sequence of 546 amino acids
Location between 52298706 and 52300347
Coverage of 3.85 %
Instances:
VLSLHTQ | VLSACAQ | VLSACAH |
pattern: VLS[AL][CH][AT][QH]
MGATKLPQNPQQTLRIVENIAKNNSNPNQPSWSCVIRNHLSQGTPDQVLSLHTQVRRQGLYIL
GLVPLIFKACASASAQIYGKSLHSESIKFGVFMDFHIASSLLSMYSRCRNLIDSRKVFDEMPER
NVVTWNAMIGGYLKNGDTESALGLFEKMSIGRNSVTWIEMIDGFAKSGDTLRARQFFDKVPLEL
SNVVTWTVMVDGYNANGELEAARKIFEMMPERNYFVWSSMISGFCKRGDVKEARKFFDRIPVRN
LVNWNSMISGYAQNGFCEEALEMFRKMQNEGFEPDEVTITSVLSACAQLGELDVGKEIHFRVKT
KGMKVNQFVSNALLDMYAKCGDLGQAKSIFEGMRHRKTACWNSMISGFAIHGKSEEALEFFKRM
EESNEMPDDITFLSVLSACAHGGCVDEGLEIFSKMETYGIVASIKHYGCLVDLLGRAGRLEEAF
DLVKRMPMKPNDAVWGALLGACRIHMDTSMLEQVMQEVGVENDLDSGDNSHHVLLSNIYAASDR
WEKAEKMRMAMVNKGFQKTPGLSSIIPNHMELQIT
Repeat found in V6N13_115473
Repeat occurs 7 times in a sequence of 249 amino acids
Location between 52440237 and 52440987
Coverage of 33.73 %
Instances:
PSDANLEAQSPG | PSDANLEAHSPG | PSDANLEAHSPG | PSDANLEAQSPG | PSDANLEAQSPG
PSDANLEAQSPD | PSDAILEAFLKE |
pattern: PSDA[NI]LEA[QFH][LS][KP][EGD]
MANGQQISFLLAFVALAMILSAGEANVRRELEVQLPGSVAPSDANLEAQSPGDVAPSDANLEA
HSPGDVVPSDANLEAHSPGDVVPSDANLEAQSPGGVAPSDANLEAQSPGGVAPSDANLEAQSPD
GDTPSDAILEAFLKEMLGASERAKEKVLVVGNSQMVKECNKTYGDAIDHLNKAVALVQGGIKTP
QGFAELETIVKEAMKDYEECDRVFAVATRPSPFVINDTYLKSLGFKFNSMAEADAHRT
Repeat found in V6N13_115478
Repeat occurs 7 times in a sequence of 618 amino acids
Location between 52478641 and 52480498
Coverage of 10.19 %
Instances:
SWNLMISGY | SWNTMISGY | SWNAMITGF | SWNTMINGY | SWNSMISGY
SWNTVIAGY | SWNAIIGGY |
pattern: SWN[ALST][VMI]I[GNTAS]G[FY]
MVPRRYLLKSSRFWSTLKAADSSKADDLYTMNKQLSHLIRSGKFHEAKTMFDEMGKRNTVTWN
SMISGYVKRREITQARKLFDEMPDRDTVSWNLMISGYASYLGCRFLEEGKNLFEQMPIRDVVSW
NTMISGYAKNGRMDEAKGLFESMPEKNVVSWNAMITGFFDNGDTSSATEYFKRMPERDSASINA
FVSGLVRNGELDEAVRALIECGNRDGWSEDLIASCNTLIAAYGQKGRVDDARKLFDQIPSNSVQ
RKRRDRVFERNVVTWNSMIMCYVKAGDIFSARELFDQMVDKDTISWNTMINGYVQILDMEEALN
LFNAMPKPDNMSWNSMISGYAQIGNLERAREYFEMMPQKYLVSWNTVIAGYDKNKDYKGAIKLF
IRMQAEGEKHDRHTLSSILSVSTGLLNLQLGMQIHQLVSKSIIPDVPIKNSLITMYSKCGALME
SRIIFDELKSPKEVISWNAIIGGYASHGYALEALEFFESMKKNNVQPTYITFISVLSACTHAGL
VDEGWAYFKSMVSEYGIEPRIEHYASLVDNVARHGQLEEAMDLIKSMPFEPDKEIWGAVLSACR
LHNNVELARVAAEALMRLEPESSAAYILLYNMYAEAGQWDAAA

Similar gene clusters

JBBPBL010000006 - Cluster 22 - Alkaloid

Gene cluster description

Download cluster GenBank file
JBBPBL010000006 - Gene Cluster 22. Type = alkaloid. Location: 54196895 - 54282087 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000007 - Cluster 23 - Putative

Gene cluster description

Download cluster GenBank file
JBBPBL010000007 - Gene Cluster 23. Type = putative. Location: 907954 - 971507 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000007 - Cluster 24 - Transporter_associated-terpene-saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000007 - Gene Cluster 24. Type = transporter_associated-terpene-saccharide. Location: 2132270 - 2317818 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))
plants/transporter_associated: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[MatE/LTP_2/ABC2_membrane/ABC_tran]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000007 - Cluster 25 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000007 - Gene Cluster 25. Type = cyclopeptide. Location: 4322091 - 4620008 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Similar gene clusters

JBBPBL010000007 - Cluster 26 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000007 - Gene Cluster 26. Type = saccharide. Location: 5522260 - 5635132 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000007 - Cluster 27 - Fatty_acid

Gene cluster description

Download cluster GenBank file
JBBPBL010000007 - Gene Cluster 27. Type = fatty_acid. Location: 5677926 - 5776844 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000007 - Cluster 28 - Fatty_acid-saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000007 - Gene Cluster 28. Type = fatty_acid-saccharide. Location: 50025620 - 50233274 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000008 - Cluster 29 - Putative

Gene cluster description

Download cluster GenBank file
JBBPBL010000008 - Gene Cluster 29. Type = putative. Location: 2059119 - 2132939 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000008 - Cluster 30 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000008 - Gene Cluster 30. Type = saccharide. Location: 40836578 - 40940420 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000009 - Cluster 31 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000009 - Gene Cluster 31. Type = cyclopeptide. Location: 34116420 - 34592939 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

No repeats detected in this cluster.

Similar gene clusters

JBBPBL010000009 - Cluster 32 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000009 - Gene Cluster 32. Type = saccharide. Location: 44122604 - 44236543 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000010 - Cluster 33 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000010 - Gene Cluster 33. Type = saccharide. Location: 12442950 - 12493551 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000011 - Cluster 34 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000011 - Gene Cluster 34. Type = saccharide. Location: 22554518 - 23001895 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000011 - Cluster 35 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000011 - Gene Cluster 35. Type = cyclopeptide. Location: 44791196 - 45607871 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

No repeats detected in this cluster.

Similar gene clusters

JBBPBL010000012 - Cluster 36 - Putative

Gene cluster description

Download cluster GenBank file
JBBPBL010000012 - Gene Cluster 36. Type = putative. Location: 1020781 - 1182460 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000012 - Cluster 37 - Terpene

Gene cluster description

Download cluster GenBank file
JBBPBL010000012 - Gene Cluster 37. Type = terpene. Location: 2489759 - 2522839 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000012 - Cluster 38 - Terpene

Gene cluster description

Download cluster GenBank file
JBBPBL010000012 - Gene Cluster 38. Type = terpene. Location: 2915006 - 3022915 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000012 - Cluster 39 - Transporter_associated-saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000012 - Gene Cluster 39. Type = transporter_associated-saccharide. Location: 42842095 - 43057503 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))
plants/transporter_associated: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[MatE/LTP_2/ABC2_membrane/ABC_tran]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000013 - Cluster 40 - Alkaloid

Gene cluster description

Download cluster GenBank file
JBBPBL010000013 - Gene Cluster 40. Type = alkaloid. Location: 30332644 - 30487391 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000013 - Cluster 41 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000013 - Gene Cluster 41. Type = saccharide. Location: 35056065 - 35146094 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000014 - Cluster 42 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000014 - Gene Cluster 42. Type = saccharide. Location: 2953278 - 3088573 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000014 - Cluster 43 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000014 - Gene Cluster 43. Type = saccharide. Location: 8590796 - 8773727 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000015 - Cluster 44 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000015 - Gene Cluster 44. Type = saccharide. Location: 29470860 - 29545699 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000015 - Cluster 45 - Lignan

Gene cluster description

Download cluster GenBank file
JBBPBL010000015 - Gene Cluster 45. Type = lignan. Location: 34890490 - 34961164 nt. Click on genes for more information.
Show pHMM detection rules used
plants/lignan: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Dirigent]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000015 - Cluster 46 - Terpene

Gene cluster description

Download cluster GenBank file
JBBPBL010000015 - Gene Cluster 46. Type = terpene. Location: 35498334 - 35553795 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000015 - Cluster 47 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000015 - Gene Cluster 47. Type = saccharide. Location: 37945322 - 38019603 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

Similar known gene clusters

JBBPBL010000015 - Cluster 48 - Polyketide

Gene cluster description

Download cluster GenBank file
JBBPBL010000015 - Gene Cluster 48. Type = polyketide. Location: 39820986 - 39871154 nt. Click on genes for more information.
Show pHMM detection rules used
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000015 - Cluster 49 - Fatty_acid

Gene cluster description

Download cluster GenBank file
JBBPBL010000015 - Gene Cluster 49. Type = fatty_acid. Location: 40820108 - 40860444 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000015 - Cluster 50 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000015 - Gene Cluster 50. Type = cyclopeptide. Location: 40999400 - 41289810 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_144953
Repeat occurs 9 times in a sequence of 958 amino acids
Location between 41032760 and 41035950
Coverage of 5.64 %
Instances:
LSGKLV | LSGKIP | LSGQIP | LSGEIS | LSGEIP
LSGELS | LSGNVG | LSGRVP | LSGEVP |
pattern: LSG[QNERK][LVI][SGVP]
MAKKGVQASPVFVVFSMFMFLFFSFVVSDNGEELELLLSFKSSIHDPSGFLSNWDSSASFCQW
QGVTCNNLSHVYKLDLSAKNLSGKLVSSSIFRLPFVQTLNLSDNQLYGEIPKDVFPSSSSSLRF
LNLSNNNFTGQIPRGSISGLEVLDLSNNMLSGKIPPEIGSFSSLKYLDLGGNVLVAKIPISISN
ITNLHVLTLASNQLVGSIPHELGKMKSLKWIYVGYNNLSGQIPEEIGTLTSLNHLNLVYNNLTG
QIPSSLGNLDDLQYLFLYQNKLTGSVPNSIFGLKKLVSLDLSDNSLSGEISELVIHLQNLEILH
LFGNSFTGKIPKALTSLPRLQVLQLWSNRLSGEIPESLGRRNNLTVLDLSTNNLTGRIPDGLCS
SGQLFKLILFSNSLEGSIPKNLSTCTSLQRVRLQNNRLSGELSSEFTKLPLVYFLDVSNNSLSG
NVGDQKWDMPSLEMLSLAGNSFSGKLPHSFGSQKIEVLDLSRNGFSGTIPRSFGSLTELMQLSL
CGNKLIGEIPEEFSSCKQLVSLDLSHNQLSGRVPTGFAEMPVLGQLDLSENQLSGEVPPQLGKM
DSLIQVNISHNHLHGSLPDTGAFLAINSSAVAGNDLCGGDETSGLPPCKKVKNRDWWFFVICSL
GALVLLAAAAIGFIFIRRRNNSVLKRVEKEDGIWELQFFDSNVSKSVTVNDITLSAKEVNGICR
GKSFVVKEIKDTSSIPSSFWSEIKQLGKLKHPNIVNLIGTCRSEKGAYLVYEHIEGKLLSETLH
NLTWEKRRKIAMGIAKSLRFLHSYCSPSVIVGDMSPERVIVDGRDEPRLRPSLPGPLSIENKAF
ISSAYVAPEVRESKDMTEKSDIYGFGLILIELLTGKSPADAEFGEQHQSIVEWARYCYSDCHLD
MWVDPMIRPAHASNANQSQIVETMNLALYCTAGDPTTRPSATDVSKTLQSAFRITSCVSTLKF

Similar gene clusters

JBBPBL010000015 - Cluster 51 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000015 - Gene Cluster 51. Type = saccharide. Location: 41676785 - 41733577 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000015 - Cluster 52 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000015 - Gene Cluster 52. Type = cyclopeptide. Location: 41874610 - 42099708 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Similar gene clusters

JBBPBL010000016 - Cluster 53 - Putative

Gene cluster description

Download cluster GenBank file
JBBPBL010000016 - Gene Cluster 53. Type = putative. Location: 2050936 - 2142185 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000017 - Cluster 54 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000017 - Gene Cluster 54. Type = saccharide. Location: 1362474 - 2174440 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000017 - Cluster 55 - Alkaloid

Gene cluster description

Download cluster GenBank file
JBBPBL010000017 - Gene Cluster 55. Type = alkaloid. Location: 31165367 - 31200729 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000017 - Cluster 56 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000017 - Gene Cluster 56. Type = saccharide. Location: 37811505 - 37906409 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000018 - Cluster 57 - Putative

Gene cluster description

Download cluster GenBank file
JBBPBL010000018 - Gene Cluster 57. Type = putative. Location: 31028487 - 31358622 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000018 - Cluster 58 - Terpene-polyketide

Gene cluster description

Download cluster GenBank file
JBBPBL010000018 - Gene Cluster 58. Type = terpene-polyketide. Location: 35975622 - 36071905 nt. Click on genes for more information.
Show pHMM detection rules used
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000020 - Cluster 59 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000020 - Gene Cluster 59. Type = saccharide. Location: 604524 - 638416 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000020 - Cluster 60 - Alkaloid

Gene cluster description

Download cluster GenBank file
JBBPBL010000020 - Gene Cluster 60. Type = alkaloid. Location: 800174 - 891648 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000020 - Cluster 61 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000020 - Gene Cluster 61. Type = cyclopeptide. Location: 2550119 - 2817770 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_105621
Repeat occurs 7 times in a sequence of 643 amino acids
Location between 2557924 and 2559856
Coverage of 9.8 %
Instances:
SWNLMISGY | SWNTMISGY | SWNAMITGF | SWNTMINGY | SWNSMISGY
SWNTMIAGY | SWNAIIGGY |
pattern: SWN[ALST][MI]I[GNTAS]G[FY]
MVPRRYLLNSSRFLSTLKAADSSKADDLYTMNKQLSHLIRSGRFHEAKSLFDGMGKRNTVTWN
SMISGYVRRREITQARKLFDEMPDRDTVSWNLMISGYASYLGCRFLEEGKKLFEQMPMRDVVSW
NTMISGYAKNGRMDEAKGLFESMPEKNVVSWNAMITGFFDNGDTSSATEYFKRMPERDSASVNA
FVSGLVRNGELDEAVRALIECGNRDGWSEDLIASCNTLIAAYGQKGRVDDARRLFNQIPSNGVQ
RKRGDRVFERNVVTWNSMIMCYVKAGDIFSARELFDQMVDKDTISWNTMINGYVQLLDMEEALN
LFNAMPKPDNMSWNSMISGYAQNGNLERAREYFEMMPQKYLVSWNTMIAGYEKNKDYKGAIKLF
IRMQAEGEKHDRHTLSSILSASTGLVNLQLGMQIHQLVSKSVIPDVPIKNSLITVYSKCGALME
SRIIFDELKSPKEVISWNAIIGGYASHGYALEALEFFESMKKNNVQPTYITFISVLSACTHAGL
VDEGWAYFKSMVSEYGIEPRIEHYASLVDNVARHGQLEKAMDLIKSMPFEPDKEIWGAVLSACR
LHNNVELAQVAAEALMRLEPESSAAYILLYNMYAEAGQWDAAAEVREMMERNNIRKQTAFSLID
SSHS
Repeat found in V6N13_105626
Repeat occurs 5 times in a sequence of 204 amino acids
Location between 2591571 and 2592186
Coverage of 19.61 %
Instances:
LEAQPPSG | LEAQSPSG | LEAQPPSG | LEAQPPSG | LEASLQEM

pattern: LEA[QS][LSP][QP][ES][GM]
MANGQQTSFSLAFVALAMILSAGEANVRRELEAQPPSGGAPPDANLEAQSPSGGAPPDANLEA
QPPSGSAPPDANLEAQPPSGSAPPNANLEASLQEMLGASERAKEKVLVVGNSQMVKECNKTYGD
AIDHLNKALALAHGGIKTPQGFAELETIVKEAMKDYEECDRVFAVATRPSPFVINDTYLKSLAS
KFNSMAEADAQQT
Repeat found in V6N13_105645
Repeat occurs 3 times in a sequence of 72 amino acids
Location between 2707171 and 2707523
Coverage of 45.83 %
Instances:
VHEQNVGAVHE | VHEQNVGAVHE | VHEHQIMACAT |
pattern: VHE[QH][NQ][VI][GM]A[CV][AH][ET]
MSKRLKKRERLMPDKDRDEESPVQGMSVHEQNVGAVHEQNVGAVHEHQIMACATGERGPRCDV
DRHVLHMLL
Repeat found in V6N13_105648
Repeat occurs 3 times in a sequence of 546 amino acids
Location between 2718163 and 2719804
Coverage of 3.85 %
Instances:
VLSLHTQ | VLSACAQ | VLSACAH |
pattern: VLS[AL][CH][AT][QH]
MGTTKLPQNPQQTLRIVENIAKNNSNPNQPSWSCIIRNHLSQGTPDQVLSLHTQVRRQGLYIL
GLVPLIFKACASASAQTYGKSLHAESIKFGVCMDFHIASSLLSVYSRCSNLIDSRKVFDEMPER
NVVTWNAMIGGYLKNGDTESALDLFEKMPIGRNSVTWIEMIDGFAKSGDTLRARQFFDKVPLEL
SNVVTWTVMVDGYNANGELEAAREIFEMMPERNYFVWSSMISGFCNSGDVKEARKFFDRIPVRN
LVNWNSMISGYAQNGFCEEALEMFRKMQNEGFEPDEVTITSVLSACAQLGELDVGKEIHFRIKT
KGMKVNQFVSNALLDMYAKCGDLGQAKSIFEGMRHRKTACWNSMISGLAIHGKSEEALEFFKRM
EGSNEMPDDITFLSVLSACAHGGCVDEGLEIFSKMESYGIVASIKHYGCLVDLLGRAGRLKEAF
SLVKRMPMKPNDAVWGALLGACRIHMDTSMLEQVMQKVGVENDLDSGDNSHHVLLSNIYAASDR
WEKAEKMRMAMVNKGFQKTPGLSSIIPNHMELQIT

Similar gene clusters

JBBPBL010000020 - Cluster 62 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000020 - Gene Cluster 62. Type = saccharide. Location: 2806692 - 2831827 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000021 - Cluster 63 - Lignan-transporter_associated

Gene cluster description

Download cluster GenBank file
JBBPBL010000021 - Gene Cluster 63. Type = lignan-transporter_associated. Location: 1883987 - 2032421 nt. Click on genes for more information.
Show pHMM detection rules used
plants/lignan: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Dirigent]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/transporter_associated: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[MatE/LTP_2/ABC2_membrane/ABC_tran]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000021 - Cluster 64 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000021 - Gene Cluster 64. Type = cyclopeptide. Location: 2062815 - 2828382 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

The following known motifs were found in CDS V6N13_005437
Location between 2238852 and 2239938
.L.Y..Y was found 3 times in this sequence
Sequence:
MVDPSSRAGYVELGEHSSPKLDNSVCLERSEGVNNSRIRHNVPGERRLCCLGLVGFRSLLGFQ
QGWMKWLSGVIDNALYPVLSLDYLKSTISELEGGLPRTIAVLAITIVLTYMSYRGLNIVGWVAI
FLEVFSLLPFIFMGFVAVPRLNASRWLVMDLGNVNWSGTPLVLLLYSSYQPPCTSGSTHNLRVV
RVQRLQLLSYRLYAHVMLLRQLTS
Repeat found in V6N13_005449
Repeat occurs 28 times in a sequence of 800 amino acids
Location between 2335725 and 2343197
Coverage of 52.5 %
Instances:
FEPMPSVTAYGDNDA | FEPTPSVTAYGDNVA | FEPKPSVTAYGGDDA | FEPRPSVTAYGGNDV | FEPRPSVTAYGDNGV
FEPRPSVTAYDNDDV | FEPRPSVTAYGDNDA | FEPRPSVTAYGGDDA | FEPRPSVTAYGGNDV | FEPRPSVTAYGDNDV
FEPRLSVTAYGDNDV | FEPRPSVTAYGNDNV | FEPRPSVTAYGDNGV | FEPRPSVTAYGNNDV | FEPRPSVTAYGDNGV
FEPRPSVTAYGDNDV | FEPRPSVTAYGDNDV | FEPRPSVTAYGNDDA | FEPTPSATAYGGNDV | FEPRPSATAYSDDDV
FEPRPSVTAYGDNDV | FEPRLSATTYGNGDV | FEPRPSVTAYGDNDA | FEPRPSVTAYGGNDA | FEPRPSVTAYVNNDF
FEPRPSIMAYGKKNP | FEPRPSVTAYGNDDI | FEPRPSVTSYNGDDA |
pattern: FEP[KMTR][LP]S[AVI][MT][AST]Y[GNDSV][GKDN][NKGD][GVDN][IAVFP]
The following known motifs were found:
FEPR was found 24 times in this sequence
MAYDGDDAGLKGEKKSFTNEFEPMPSVTAYGDNDAGLKGEKKSFTNDFEPTPSVTAYGDNVAG
LKGEKKSFTHYFEPKPSVTAYGGDDAGLKGERKSFTNDFEPRPSVTAYGGNDVPSVTAYGGNDV
GLKGEKKSFTNDFEPRPSVTAYGDNGVPSVTAYGDNGVGLEGEKKSFTNDFEPRPSVTAYDNDD
VPSVTAYDNDDVGLKGEKKSFTNDFEPRPSVTAYGDNDAPSVTAYGDNDAGEKKSFTNDFEPRP
SVTAYGGDDAPSVTAYGGDDAGLKGERKSFTNDFEPRPSVTAYGGNDVPSVTAYGGNDVGLKGE
KKSFTNDFEPRPSVTAYGDNDVPSVTAYGDNDVGLKGEKKSFTNDFEPRLSVTAYGDNDVLSVT
AYGDNDVSLKGEKKSFTNDFEPRPSVTAYGNDNVPSVTAYGNDNVDLKGEKKSFTNDFEPRPSV
TAYGDNGVPSVTAYGDNGVGLEGEKKSFTNDFEPRPSVTAYGNNDVPSVTAYGNNDVGLKGEKK
SFTNDFEPRPSVTAYGDNGVPSVTAYGDNGVGLEGEKKSFTNDFEPRPSVTAYGDNDVPSVTAY
GDNDVGLKGEKKSFTNDFEPRPSVTAYGDNDVPSVTAYGDNDVGLKGEKKSFTNDFEPRPSVTA
YGNDDAPSVTAYGNDDAGLKRGKKLFTNDFEPTPSATAYGGNDVSLKGEKKLFTHYFEPRPSAT
AYSDDDVPSATAYSDDDVGEKKSFTNDFEPRPSVTAYGDNDVPSVTAYGDNDVGLKEEKKSFTS
DFEPRLSATTYGNGDVLSATTYGNGDVGLKGEKKLFTNDFEPRPSVTAYGDNDAPSVTAYGDND
AGLKGEKKSFTNDFEPRPSVTAYGGNDAPSVTAYGGNDAGLKGEKKSFTSAFEPRPSVTAYVNN
DFPSVTAYVNNDFEPRPSIMAYGKKNPFTSDFESRPSVTTYDDDNAGLQREKKSFTNDFEQRSN
VTSYVSSGFEPRPSVTAYGNDDIPSVTAYGNDDIGLKEQKKAFTSDFEPRPSVTSYNGDDADLK
GVKKSLTSNLEPETSASFY
The following known motifs were found in CDS V6N13_005450
Location between 2343358 and 2343706
FEPR was found 2 times in this sequence
Sequence:
MQFADTLSAARKDAGEYWRAVMKDQPMPEALMELVRIEAASAGSDEKTKRGTLASIELLKGDK
IIVEDFERPIRPKGDEKKSTFSDDFEPRPSVTAYVDDEKSSSFAEDFEPRRV
Repeat found in V6N13_005461
Repeat occurs 14 times in a sequence of 386 amino acids
Location between 2458192 and 2459353
Coverage of 54.4 %
Instances:
FLKDFDPNRPQYNYL | FLKDFDPNRPQYNYL | FLKDFDPNRPQYNYL | FLKDFDPNRPQYNYL | FLKDFDPNRPQYNYL
FLKDFDPNRPQYNYL | FLKDFNPNRPQYNYL | FLKDFDPNRPQYNYL | FLKDFDPNRPQYNYL | FLKDFDPNRPQYNYL
FLKDFDPNRPQYNYL | FLKDFDPNRPQYNYL | FLKDFDPNRPQYNYL | FLKEFDPNRPQYNYL |
pattern: FLK[ED]F[ND]PNRPQYNYL
MQFVETIAARKAPDEGSNDEMKEKNMPQADKSFLKDFDPNRPQYNYLSQEAMKSDFLKDFDPN
RPQYNYLSQEVMKNAFLKDFDPNRPQYNYLSQEAMKNAFLKDFDPNRPQYNYLSQEAMKNAFLK
DFDPNRPQYNYLSQEAMKNAFLKDFDPNRPQYNYLSREAMKNAFLKDFNPNRPQYNYLSQEAMK
NAFLKDFDPNRPQYNYLSQEAMKNAFLKDFDPNRPQYNYLSQEAMNNAFLKDFDPNRPQYNYLS
QEAMKDAFLKDFDPNRPQYNYLSQEAMKNGFLKDFDPNRPQYNYLSQEAMKNAFLKDFDPNRPQ
YNYLSQEAMKNAFLKEFDPNRPQYNYLSQEAMNSLKKDDQSHDTENKDDKSQETKTSFVMDLAK
TVL
Repeat found in V6N13_005468
Repeat occurs 14 times in a sequence of 399 amino acids
Location between 2556440 and 2557809
Coverage of 52.63 %
Instances:
FLKDFDPNRLQYNYL | FLKDFDPNRPQYNYL | FLKDFDPNRPQYNYL | FLKDFDPNRPQYNYL | FLKDFDPNRPQYNYL
FLKDFDPNRPQYNYL | FLKDFDPNRPQYNYL | FLKDFDPNRPQYNYL | FLKDFDPNRPQYNYL | FLKDFDPNRPQYNYL
FLKDFDPNRPQYNYL | FLKDFDPNRPQYNYL | FLKDFDPNRPQYNYL | FLKDFDPNRPQYNYL |
pattern: FLKDFDPNR[LP]QYNYL
MKPSLAFFALLGLLLFAETIAARKAPEEGSNDEMKEKTMPQADKSFLKDFDPNRLQYNYLSQE
TMKNAFLKDFDPNRPQYNYLSQEAMKNAFLKDFDPNRPQYNYLSQEAMKKAFLKDFDPNRPQYN
YLSQDAMKNAFLKDFDPNRPQYNYLSQDAMKNAFLKDFDPNRPQYNYLSQEAMKNSFLKDFDPN
RPQYNYLSQEAMKNAFLKDFDPNRPQYNYLSQEAMKNDFLKDFDPNRPQYNYLSQEAMKNTFLK
DFDPNRPQYNYLSQEAMKNAFLKDFDPNRPQYNYLSQEAMKNAFLKDFDPNRPQYNYLSQEAMK
NAFLKDFDPNRPQYNYLSHEAMKNAFLKDFDPNRPQYNYLSQETMNSLKKNDQSQDTENKDDKS
QETKTYAVMDLAKSVL

Similar gene clusters

JBBPBL010000022 - Cluster 65 - Fatty_acid

Gene cluster description

Download cluster GenBank file
JBBPBL010000022 - Gene Cluster 65. Type = fatty_acid. Location: 14391798 - 14614976 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000022 - Cluster 66 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000022 - Gene Cluster 66. Type = cyclopeptide. Location: 15353914 - 16424367 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_083451
Repeat occurs 9 times in a sequence of 452 amino acids
Location between 15888361 and 15889919
Coverage of 11.95 %
Instances:
PYFTKI | PYFSKT | PYFSKT | PYFSKT | PYFSKT
PYFTKT | PYFSKT | PYFSKV | PYFTKS |
pattern: PYF[ST]K[SVTI]
MVIRFTYVVPSCLLLLMCGLGNATWASEDKYVRPYLVESAAEEMKDLEDKFSRPYFTKITDDE
MKDLEDKFASPYFSKTNEMKDLEGKFARPYFSKTNEMKDLEDKFASPYFSKTSEMKGLEDKFAS
PYFSKTNEMKDLEEKYSRPYYSKIMSDVMKILKDRFARPYFTKTTGDEMKDLEGKFAHPYFSKT
MGDKMKDLNDKFTRPYFSKVTNVEMMDLESKYARPYFTKSSSYKMKSRKHHDHNHDESAQIGLF
TFDELRGFSVGKKLPIVFPIKDHSLYPPFLPKEVADTIPFSSSQVSNILQFFSVFPDSPKGKAI
QDTLTKCELEAAEGETKICATSLESLHVSELPQEIDSQKKVACHPMPYLYAVYFCHIFEATETK
DFKLQLVGDITGDKVDALVVCHMDTSGWSSDHVVFRMLGIKHGGALCHVFSQGNLVLIDEASAI
AVSAV

Similar gene clusters

JBBPBL010000023 - Cluster 67 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000023 - Gene Cluster 67. Type = saccharide. Location: 24198700 - 24252490 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000023 - Cluster 68 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000023 - Gene Cluster 68. Type = saccharide. Location: 27630157 - 27672242 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

Similar known gene clusters

JBBPBL010000024 - Cluster 69 - Alkaloid

Gene cluster description

Download cluster GenBank file
JBBPBL010000024 - Gene Cluster 69. Type = alkaloid. Location: 19208776 - 19268809 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000024 - Cluster 70 - Putative

Gene cluster description

Download cluster GenBank file
JBBPBL010000024 - Gene Cluster 70. Type = putative. Location: 20565429 - 20893927 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000025 - Cluster 71 - Fatty_acid

Gene cluster description

Download cluster GenBank file
JBBPBL010000025 - Gene Cluster 71. Type = fatty_acid. Location: 21198968 - 21576821 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000025 - Cluster 72 - Polyketide

Gene cluster description

Download cluster GenBank file
JBBPBL010000025 - Gene Cluster 72. Type = polyketide. Location: 21872835 - 21963304 nt. Click on genes for more information.
Show pHMM detection rules used
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000026 - Cluster 73 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000026 - Gene Cluster 73. Type = saccharide. Location: 591908 - 636084 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000027 - Cluster 74 - Fatty_acid

Gene cluster description

Download cluster GenBank file
JBBPBL010000027 - Gene Cluster 74. Type = fatty_acid. Location: 2153016 - 2243712 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000027 - Cluster 75 - Alkaloid

Gene cluster description

Download cluster GenBank file
JBBPBL010000027 - Gene Cluster 75. Type = alkaloid. Location: 5190935 - 5264004 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000028 - Cluster 76 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000028 - Gene Cluster 76. Type = cyclopeptide. Location: 2787623 - 3117861 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Similar gene clusters

JBBPBL010000029 - Cluster 77 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000029 - Gene Cluster 77. Type = cyclopeptide. Location: 8072685 - 8456886 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Similar gene clusters

JBBPBL010000029 - Cluster 78 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000029 - Gene Cluster 78. Type = cyclopeptide. Location: 8096312 - 8590321 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Similar gene clusters

JBBPBL010000029 - Cluster 79 - Putative

Gene cluster description

Download cluster GenBank file
JBBPBL010000029 - Gene Cluster 79. Type = putative. Location: 9123116 - 9302790 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000029 - Cluster 80 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000029 - Gene Cluster 80. Type = cyclopeptide. Location: 15283517 - 16215016 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_108457
Repeat occurs 4 times in a sequence of 575 amino acids
Location between 15748246 and 15750286
Coverage of 4.17 %
Instances:
DSFKNY | DSFKAY | DSFSSY | DSFQSY |
pattern: DSF[SKQ][ANS]Y
MLAIVVQVLCSQAKENPFTPKASLIRYWNNHISSNLPKPPFLFSKASPLTAVDSAILTELADH
HSLSSHIEAFCSLADLFCLSQEEDLKLDAAGKGGKDASFAVYSSKSFTGYGTSRRGGVDSFKNY
SDGINTPNESFKKYSGGSNGYREEFTSYAKDANVAIDNFTNYGSGATGGSGQFNNYQERVNAPK
HFINYGKKGKSVPAEFTSYSGNANTIGSSFTGYGVLGNSANDSFKAYGDSGNNPHNNFKTHGLA
SKSGIDSFSSYRDSANVGDDSFQSYARDSNSGKVDFANYGKTFNVGNSTFKEYGKGSTTVGFKT
YGLARSFLDYAKKGVSFAGYSKQTAPSPLSGISVNRWVEPGKFFRESILKQGSVMVMPDIEDKM
PRRSFLPRGISSKLPFSTSESDLSELKRIFGPSMEPVLVNALSECERPASRGETKRCVGSVEDM
IDFATSVLGQGVTVRTTENVRGSKQEIMIGEVKGINGGEVTESVSCHQSLYPYLLYYCHWVPKV
RVYEADILEVKSRSKINRGVAICHLDTSAWSPTHGAFVALGSSPGRIEVCHWIFKNDMAWTIVD

Similar gene clusters

JBBPBL010000030 - Cluster 81 - Putative

Gene cluster description

Download cluster GenBank file
JBBPBL010000030 - Gene Cluster 81. Type = putative. Location: 16076839 - 16115782 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000032 - Cluster 82 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000032 - Gene Cluster 82. Type = cyclopeptide. Location: 596084 - 896539 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_139345
Repeat occurs 4 times in a sequence of 303 amino acids
Location between 634970 and 637736
Coverage of 7.92 %
Instances:
APTPDC | APTAVP | APTPDC | APTPSA |
pattern: APT[AP][SVD][CAP]
MINTVAAVLVITLCSATATSAQAPAAAPTPDCMTSLLNLSDCLTYVEAGSNLTKPEKPCCPEL
AGLVESSPQCLCYLLDKNATASYGLNISMDRALKLPNVCHVSTPPVSLCSVINGAPTAVPTPST
EGLTSPAPEPEGATAFGQSPAAEAPTPDCMTNLLNLSDCLTYVEAGSNLTKPDKPCCPELAGLV
ESSPQCLCYLLDKNKTASFGLSIDMDRALKLPNVCGVSTPPVSLCSVINGGPTGAPTPSAGGSL
SPGSVGQEPGAAPGPSNGNTPGGSNIAIPGLASLFALPIAFLPILFGV

Similar gene clusters

JBBPBL010000032 - Cluster 83 - Lignan

Gene cluster description

Download cluster GenBank file
JBBPBL010000032 - Gene Cluster 83. Type = lignan. Location: 927701 - 1058413 nt. Click on genes for more information.
Show pHMM detection rules used
plants/lignan: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Dirigent]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000032 - Cluster 84 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000032 - Gene Cluster 84. Type = saccharide. Location: 14445675 - 14542426 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000032 - Cluster 85 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000032 - Gene Cluster 85. Type = saccharide. Location: 21839526 - 21890740 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000033 - Cluster 86 - Terpene

Gene cluster description

Download cluster GenBank file
JBBPBL010000033 - Gene Cluster 86. Type = terpene. Location: 6076120 - 6251450 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000034 - Cluster 87 - Polyketide

Gene cluster description

Download cluster GenBank file
JBBPBL010000034 - Gene Cluster 87. Type = polyketide. Location: 697684 - 750431 nt. Click on genes for more information.
Show pHMM detection rules used
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000034 - Cluster 88 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000034 - Gene Cluster 88. Type = cyclopeptide. Location: 1932312 - 2292490 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_118964
Repeat occurs 8 times in a sequence of 908 amino acids
Location between 1950276 and 1953561
Coverage of 5.29 %
Instances:
LSGKLV | LSGQIP | LSGEIS | LSGEIP | LSGELS
LSGNVG | LSGPIP | LSGEVP |
pattern: LSG[QNEKP][LVI][SGVP]
MAKKGAQAMVVFFMFMFLFFSFVVSDNAEELELLSFKSSIQDPSGFLSNWESSASFCQWHGVT
CNNQSRVDKLDLSAKNLSGKLVSSSIFHLPFIQTLNLSNNQLYGEIPMDVFSSSSSSLRFLNLS
NNNFTGQIPKGSIPGLEFLTLASNQLNGPIPQELGKMKSLKWIYVGYNNLSGQIPEEIGTLTSL
NHLDLVYNNLTGQIPSSLGNLSDLQYLFLYQNKLTGPIPNTIFGLKKLVSLDLSDNSLSGEISE
LVIHLQNLEILHLFGNSFTGKIPKALTVLPRLQVLQLWSNRLSGEIPESLGRRNNLTVLDLSTN
NLTGRIPDGLCSSGRLFKLILFSNSLQGPIPKNLSTCTSLQRVRLQNNRLSGELSSEFTKLPLV
YYLDVSNNYLSGNVGDQKWDMPSLEMLSLAGNRFSGNLPHSFGSQKIEIMDLSRSGFSGTIPRS
FRSLTELMQLSLCGNKLIGEIPEELSSCKKLVSLDLSHNQLSGPIPTGFAEMPVLGQLDLSENQ
LSGEVPPQLGKMESLIQLNISHNHLQGSLPSTGAFLAINSSAVAGNNLCGGDDTSGLPPCKEVK
NWWFFVICSLGGLVLLTVAAFGFIFIRRRNNLELKRVESEDGIWELQFFDSNVSKSVTVDDITL
SAKQVNGICRGKSFVVKEIKEVNSIPSSFWSEIKRLGKLQHPNIVNLIGTCRSDKGAYLVHEYI
KGKLLSETLHSLTWEKRRKVAVGIAKALRFLHSHCSPSVIVGDMSPERVIIDGKDEPRLRVSLP
WQLSIANKPFNCSAYVAPEARESKAMTQKSDIYGFGLILIELLTGKSPADAEYGEQHQSMVEWA
RYCYSDCHLDVWVDPMIKPGHASNVNQSQIVEAMNLALHCTAGDPMARPSSTDVSKTLESAFKM
TSCVPTLNFSSTV

Similar gene clusters

JBBPBL010000034 - Cluster 89 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000034 - Gene Cluster 89. Type = saccharide. Location: 2755844 - 2801171 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000034 - Cluster 90 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000034 - Gene Cluster 90. Type = saccharide. Location: 2989022 - 3066333 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000034 - Cluster 91 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000034 - Gene Cluster 91. Type = cyclopeptide. Location: 3110404 - 3365855 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_119198
Repeat occurs 9 times in a sequence of 578 amino acids
Location between 3235944 and 3240314
Coverage of 12.46 %
Instances:
NPFIIYKN | NPFIIYEN | NPFIIYEN | NPFIIYEN | NPFIIYEN
NPFIIYEN | NPFIIYEN | NPFIIYKN | NPFIIYEK |
pattern: NPFIIY[EK][NK]
MCEGVGIATNNVVEHIAAILDTKNAGRIGLTQGGVGGLLGGLVWAGCTLVRADYALVCAGQTL
RCAGLDCWCAVRDILQRLSETPLQRMVSFHSMAIHFLVVFSLLNVAFGGRHGHGALSSEEVHWN
SVFPNTPMPKALKNLLPPPPTGTSKKFKGVDAPVNPFIIYKNEDRNKESKGVNSPENPFIIYEN
VDGNKKSKGVDAPVNPFIIYENGDRNKESKGVDSPGNPFIIYENVGRNKESKGVNAPVNPFIIY
ENAKRNKESKGVNAPVNPFIIYENNGRNKESKGVNAPVNPFIIYENVDRNKESKDVNVPVNPFI
IYKNDGKNKESKGVNAPVNPFIIYEKQSTDNKNSVGRKHGQAAMNETIYFFQEDLRPGKIVKLP
LLAKPRDFTPFLPHQLAHSIPFSTDKLPEILKHFSFGSESLQADAVKQTIKGCERQVMRGEQMF
CATSFDSFVDSSVSKLGRNVQLLANELGKETNDPMFSIGRGIQDMGEEELVCHKMTYPYAVFLC
HSIEGTVVYKVPLVGIHGTKANAIAICHKDTSAWNPNHPAFFILNVKPGTVPICHFVVRDTLVW
VRK
Repeat found in V6N13_119216
Repeat occurs 3 times in a sequence of 711 amino acids
Location between 3353440 and 3357822
Coverage of 2.53 %
Instances:
EMDRCL | EMDQCL | EMDRFL |
pattern: EMD[QR][CF]L
MLARRVSLYRCKFTEMYRKSYRTLSSSAKDKGNYFQWSSEMDRCLAKLLADQVKKGNKTDSGL
KSAAYMGALTVINKKFGLDLTKEHLMNRLKTWEKQFEILKELCAQRGFKWDEKRRMVVADASVW
HDYTMAHPDARQFQERPIDNYDEWCIIIGNGQVVLENVGETHLQSAASGDGLDTASSHDIQSED
NHIRNLHWTDAMDYYLGKSLAEKVKEGYKVDKTLQREAYDSALSTLNEKIGFELTKDHIRNRLK
TWKKQYGTLKQLLSHPGFKWDRTRKMIVADDSVWTNYVKAHPDARAFWGRVIENYDNLCTIFGY
NTDVAEASDISPVQNSGKVRDQAKNMRWTYEMDQCLSKVLAEQAKLGNKSKLNKLRPAAYAVAV
SALNKRFQLDLTKDHIMNRMRTWKKQYTILKGLLRHGEFEWDKTQTMIIANDSAWNHYIKRNPD
ARYFQGRIISNYKELCTIFGSDDLPEASLNSSNDDVNMTANNEAAVDTEEMFYNQSDAAKDKGK
YILWTNEMDRFLTEQLLEQAILGNKLQKSFKPVALKATLSVINKKFSLDLTIENIRNRLRTWQK
QYRLVKELLSQHGFKWDERHKMVIANDSEWRECIQRNPDVSRIRGRVIDNFNELHVIVGNEQAG
RRLSEAGDGVVNHVGNNEEAIEAPVEVMVDEDMCHNDSDDDLQVSSQRTMSRHSPSHSKEALKR
GGVAVMSC

Similar gene clusters

JBBPBL010000034 - Cluster 92 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000034 - Gene Cluster 92. Type = saccharide. Location: 5207654 - 5295848 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000034 - Cluster 93 - Lignan

Gene cluster description

Download cluster GenBank file
JBBPBL010000034 - Gene Cluster 93. Type = lignan. Location: 10264061 - 10333092 nt. Click on genes for more information.
Show pHMM detection rules used
plants/lignan: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Dirigent]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000034 - Cluster 94 - Terpene

Gene cluster description

Download cluster GenBank file
JBBPBL010000034 - Gene Cluster 94. Type = terpene. Location: 10973764 - 11039696 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000034 - Cluster 95 - Fatty_acid

Gene cluster description

Download cluster GenBank file
JBBPBL010000034 - Gene Cluster 95. Type = fatty_acid. Location: 19305609 - 19364383 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000036 - Cluster 96 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000036 - Gene Cluster 96. Type = saccharide. Location: 540750 - 586830 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000036 - Cluster 97 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000036 - Gene Cluster 97. Type = saccharide. Location: 780787 - 839370 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000036 - Cluster 98 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000036 - Gene Cluster 98. Type = cyclopeptide. Location: 869087 - 1158569 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Similar gene clusters

JBBPBL010000036 - Cluster 99 - Polyketide

Gene cluster description

Download cluster GenBank file
JBBPBL010000036 - Gene Cluster 99. Type = polyketide. Location: 10436226 - 10497820 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000038 - Cluster 100 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000038 - Gene Cluster 100. Type = cyclopeptide. Location: 311342 - 490938 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_136104
Repeat occurs 3 times in a sequence of 347 amino acids
Location between 400581 and 401698
Coverage of 10.37 %
Instances:
EFGAFWDGDNLD | EFGAYGYDDSYT | EFGAYGYDDSYT |
pattern: EFGA[FY][WG][DY][GD]D[NS][LY][TD]
MVNNLEFGAFWDGDNLDKESKMKNFENNKDGSNNKNSSGNKGIDDSNFSNYAYDDLNTNFQIE
DSPDNKGINDPEFGAYGYDDSYTESKIEDNLEKKSNSGEFPGNRGINDPEFGAYGYDDSYTISG
TEDNSDKNLGNRKALRGQVNLPRLLQKSPTATFLPQQIAESLAPMSNDNLPEILKNLSLKAESK
GAVYVQVAVKNCARDEMEGEAKYCAASLESFVDSGVSVMGKNIRLLWHELAEGTKNPMFTIGPG
AGEMGENNIVCHKMKYPYAVYLCHSIEKTEVYKVPLVSDDGTKANAMVACHKDTSAWSPNHVAF
KILKVKPGSVPICHFLGRDTLVWIPHPN
Repeat found in V6N13_136114
Repeat occurs 4 times in a sequence of 390 amino acids
Location between 479298 and 482107
Coverage of 11.28 %
Instances:
NNNNNNSGGGG | NNNNNSGGGGG | NNNNSGGGGGN | NNNSGGGGGNH |
pattern: NNN[NS][NGS][NGS][SG]GG[GN][GHN]
MSTAAFLFTPFPPFSPLGKPTPSLSTSFPPRLHLRLSSSSTGLRHRQHSSLSTFSTLPGGDGG
DVNNNNNNSGGGGGNHDNGKGNGGDGDENAGDENKRKAMIILAEAGRSMESLPKDLAAGIQAGK
VPGSVIERFLGLEKSGLMRWLMQFGGFKERLLADDLFLAKVGIECGVGIFTKTAAEYDRRRENF
FKELEIVFADVVMAIIADFMLVYLPAPTVSLRAPLAVNAGVISKFFHSCPDNAFQIALHGTSYS
LLQRLGAVMRNGAKLFAVGTTSSLVGTAATNALINARKAVDKTSVDEVENVPILSTSVAYGVYM
AVSSNLRYQVLAGVIEQRMLEPLLHQHKLMLSAICFAVRTGNTYLGSLLWVDYARLVGIQKAHE
EENPVLE

Similar gene clusters

JBBPBL010000038 - Cluster 101 - Fatty_acid-lignan

Gene cluster description

Download cluster GenBank file
JBBPBL010000038 - Gene Cluster 101. Type = fatty_acid-lignan. Location: 638123 - 683090 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))
plants/lignan: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Dirigent]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000038 - Cluster 102 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000038 - Gene Cluster 102. Type = saccharide. Location: 3004716 - 3065115 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000038 - Cluster 103 - Putative

Gene cluster description

Download cluster GenBank file
JBBPBL010000038 - Gene Cluster 103. Type = putative. Location: 3401549 - 3481714 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000038 - Cluster 104 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000038 - Gene Cluster 104. Type = cyclopeptide. Location: 3768725 - 4026987 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_136731
Repeat occurs 3 times in a sequence of 175 amino acids
Location between 3855501 and 3856194
Coverage of 12.0 %
Instances:
KEVSADA | KEVSVDA | KEVSVLR |
pattern: KEVS[AV][LD][AR]
MGIWDFISGSTDSVKGLLLSSYNHGSDVVTKSKEVSADALQKVNHHGSVAITKGKEVSVDALQ
KVNHHMSDPETRSKISRVATEVAKNATIEGLKSIPGAYPTYKIVSKSISDDDKKLQSENKSEKQ
KEELKTLQATVSKLEKEVSVLREQVEASVKPEGKYQVHSMKKFIRSHF
Repeat found in V6N13_136735
Repeat occurs 5 times in a sequence of 350 amino acids
Location between 3878475 and 3880577
Coverage of 11.43 %
Instances:
QKEQENAT | QKEQENAT | QKEQENAT | QKEQEKMK | QKEQDKTR

pattern: QKEQ[ED][NK][AMT][KTR]
MLMCRIGALEDWRKQIGAVEDRSKKALPTVADGEIQGKYSIDKASSYSASGSQLLDKQLAAII
DLQSIIRGCLVQKHLGNLHALRRLRSRRTMSRKNSKVKDIPNEQPSAMAELQRRVLDVESTLGQ
KEQENATLREQVQQANMQKEQENATLREQVQQANMQKEQENATLREQLQQYEVKMQKEQEKMKK
MEETLQKKIASLQASLAAAKRSDGSDGQPRRGELDSKDNVSMQPRTLGGNKPDVGGIENGVSGL
AKEFEQQKQTFEDDMSKMDPNSNSYEELRKLKRSFRAWKKDYKMRLKEMKAKIPKQGGQKEQDK
TRKTWWPKRGKVLQMQNYNKTTVRTAHHKES
Repeat found in V6N13_136758
Repeat occurs 4 times in a sequence of 344 amino acids
Location between 4014718 and 4016380
Coverage of 17.44 %
Instances:
MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL |
pattern: MQIFVKTLTGKTITL
MSCRAGQIRSEGHDYDTWLYPLVEIKPFFFTPSSISSFKMQIFVKTLTGKTITLEVESSDTID
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE
STLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLADYNIQKESTLHLVLRLRGGF

Similar gene clusters

JBBPBL010000038 - Cluster 105 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000038 - Gene Cluster 105. Type = saccharide. Location: 6360869 - 6384850 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000038 - Cluster 106 - Putative

Gene cluster description

Download cluster GenBank file
JBBPBL010000038 - Gene Cluster 106. Type = putative. Location: 9135428 - 9196191 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000038 - Cluster 107 - Putative

Gene cluster description

Download cluster GenBank file
JBBPBL010000038 - Gene Cluster 107. Type = putative. Location: 18380163 - 18529975 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000039 - Cluster 108 - Fatty_acid

Gene cluster description

Download cluster GenBank file
JBBPBL010000039 - Gene Cluster 108. Type = fatty_acid. Location: 11970869 - 12090072 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000039 - Cluster 109 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000039 - Gene Cluster 109. Type = cyclopeptide. Location: 13868471 - 14743034 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Similar gene clusters

JBBPBL010000041 - Cluster 110 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000041 - Gene Cluster 110. Type = saccharide. Location: 3218111 - 3280282 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

Similar known gene clusters

JBBPBL010000041 - Cluster 111 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000041 - Gene Cluster 111. Type = saccharide. Location: 3752577 - 3975108 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000043 - Cluster 112 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000043 - Gene Cluster 112. Type = saccharide. Location: 843707 - 911260 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000046 - Cluster 113 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000046 - Gene Cluster 113. Type = saccharide. Location: 220978 - 293017 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000046 - Cluster 114 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000046 - Gene Cluster 114. Type = cyclopeptide. Location: 381650 - 610607 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_077892
Repeat occurs 19 times in a sequence of 848 amino acids
Location between 570207 and 572754
Coverage of 33.61 %
Instances:
GGGQQYSGPPQMGGG | GGGQQYSSSLQTGGG | GGGQQQYSSSLQTGG | GGGQQYSGSPQTGGG | GGGQQYSGSPRMGGG
GGGQQYSGSPQTGGG | GGGQQYSSTPQMGGG | GGGQQYSGSPQMGGG | GGGHQYFDPPRTGGG | GGGQQYSGSPQTGGG
GGGHQYSSPPQMGGG | GGGQQYSGSPQMGGG | GGGQQYSGSPQRGGG | GGGQQYSGSPQMGGG | GGGQQYSGSPQTGGG
GGGQQYSGSPQMGRG | GGGQQYSGSPQMGGG | GGGQQYSGSPQMGGG | GGGQQYQDSNYGDGD |
pattern: GGG[QH]Q[QY][QSFY][GSD][STP][LSNP][LQRY][QGMTR][GDT][GR][GD]
MSLFRILLFRSLNHHLHRRRPLVPLSHFFHNVALNPASENPIQNPPQRSYAFTSAEEAAAERR
RRKRRLRIEPPIHALRASAPSAPPARDPNAPRLPDSTSALVGHRLNLHNRVQSLIRASDLDAAS
LLARSSVFSSTRPTVFTCNAIIAAMYRNKRFNEAIALFHFFFKQSDIVPNVVSYNNLINTHCDR
GDVDVAIQVYHEILEKAPFSPSAVTYRHLTKGLVDAGRIEEAVGLLREMLNKGHGADSLVFNNL
ISGFLNLGNLDKANELFDELKERCLVYDGVVSATFMEWWFDQGKDKEAMDSYKSLLDRKFKMPP
PTCNTLLEVLLKHGKTKEAWALFENMLDNHTPPNTQAVNSDTFSIMVNEYFKLGNFEEAIKIFK
KVGMKPGSKPFAMDTAGYNNIISRLCEHGLLSEAEKFFEELCGKSLTPDVPMYRTMIDAYLNAG
RVDDALRSFTKMVETGLRVVSSFGTRVFSEFLKNDKNMEVAALLTKMGEKDPKPDASIYGVVVR
GLCNANELDKSLDILDQMMKYSIGVTPALQEFVRGAFGKVGRNEDIDRVLNENGWRFPGRQPRP
FVQPPRSPSGPAEMGGWQSSGSPQLGGGQQYSGPPQMGGGQQYSSSLQTGGGQQQYSSSLQTGG
GQQYSGSPQTGGGQQYSGSPRMGGGQQYSGSPQTGGGQQYSSTPQMGGGQQYSGSPQMGGGHQY
FDPPRTGGGQQYSGSPQTGGGHQYSSPPQMGGGQQYSGSPQMGGGQQYSGSPQRGGGQQYSGSP
QMGGGQQYSGSPQTGGGQQYSGSPQMGRGQQYSGSPQMGGGQQYSGSPQMGGGQQYSGSPQMGG
GQQYQDSNYGDGDQLRY

Similar gene clusters

JBBPBL010000046 - Cluster 115 - Fatty_acid

Gene cluster description

Download cluster GenBank file
JBBPBL010000046 - Gene Cluster 115. Type = fatty_acid. Location: 669679 - 780114 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000046 - Cluster 116 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000046 - Gene Cluster 116. Type = saccharide. Location: 992137 - 1029924 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000046 - Cluster 117 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000046 - Gene Cluster 117. Type = cyclopeptide. Location: 7357615 - 7639242 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_078957
Repeat occurs 3 times in a sequence of 533 amino acids
Location between 7363553 and 7366962
Coverage of 3.38 %
Instances:
ATIFGD | ATIYEE | ATIYES |
pattern: ATI[FY][EG][ESD]
MNPFLCFVLQAWNPPAACEFSRETSRFLRDYAVWEINAFLWISLLTVTYFLTHKLFKFFKLWN
QGSKIPGPPSPSFYGHFSSLSNQNLTEVLSDSHGEYGSVVKLWLSPKQLLVSIKEPDVIREMLW
KFKDKLPLTEKAFDLAFGQSTLFASSFDKVEKRRESLTSELNVKLLDRANLIPTKAVERILAER
HQNMPKGHADRKMASQHMAFTLLGATIFGDTFLAWSKATIYEELLMTVTKDACFWASYSVTPFW
DRGFWRYRRLCTKLKCLTKDLVQQCSKNYKFNGHLNVRDEPYGNIMGMLFHGCLTTGGLISNML
MRLVTHPEIQHKIYTEIIMAREGSEDKDQPVAEKMPLLLATIYESARVMPAGPLLQRCSLQHDL
RLKSGIIVPAGAIVVVPMQLVQMDDSSWGNDAGKFNPYRFLSETEKISASLNKDTSIAGHAEEP
KGQRKSSFVLNDPNENAAFLPFGSGTRACVCQKFVIQGIASLFASLLEQYEVRLGTGSKTNSKL
TSTDSISQDFLSSELVFVGRTS
Repeat found in V6N13_078985
Repeat occurs 6 times in a sequence of 638 amino acids
Location between 7509007 and 7510924
Coverage of 5.64 %
Instances:
ATPPAL | ATPPAT | ATPPAL | ATPPVL | ATPPAL
ATPPGS |
pattern: ATPP[AGV][LST]
MRKPSKESELSTEPIGQNLIKLISNVCFSVFVLSVLVFTAIAITYQPPDPWLESAPSLTKLFT
QTENATFKTDDSIIKTGEDLLSAPAPATPPALSPTPSDLAATPPATIAATPPALSATPPVLAAI
PPAMSASPPAMAATPPALSATAPAIVAATPPGSAALAAASPAMAANPVAETMIEKSKEKTSNSS
LKSECEKLKAVNCSDPRLLLAVKKFNLKTFKSIVFLEYQTPVNGTKQDECDVFWRFRNRKEKSW
RKYRDFRRFQFGITENCTYKVMHTGPWHSGINARPPRIRPNTTRSSGGTWKPKLAPSIRDEEIN
DTIPTLGSETNFRKGKYLYYARGGDYCKGMNQYLWSFLCGLGEAMYLNRTFVMDLNLCLSATYS
LTNKDEEGKDFRFYFDFEHLKETVSVVGESEFLRDWKKWDKGHKRKVPVKKVKTHKVTPMQLKK
DKGTIIWRQFDGPEPENYWYRVCEGQAAKYIHRPWHAIWKSKRLMNIVTEISGRMDWDFDALHV
VRGEKARNKQLWPHLDSDTSPEAILVKVKEMVQPWRNLYIATNEPFYNYFDNLRSHYKVHLLDD
YKELWSDTSEWYNETTMLNNGKPVEFDGYMRVAVDTEVLYRSKIRVETFYNLTKDCKDGINTC

Similar gene clusters

JBBPBL010000046 - Cluster 118 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000046 - Gene Cluster 118. Type = saccharide. Location: 10393734 - 10507522 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000046 - Cluster 119 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000046 - Gene Cluster 119. Type = cyclopeptide. Location: 12617553 - 12976317 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Similar gene clusters

JBBPBL010000046 - Cluster 120 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000046 - Gene Cluster 120. Type = saccharide. Location: 16728497 - 16847771 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000047 - Cluster 121 - Fatty_acid-saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000047 - Gene Cluster 121. Type = fatty_acid-saccharide. Location: 6562148 - 6840974 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000048 - Cluster 122 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000048 - Gene Cluster 122. Type = saccharide. Location: 4514761 - 5090721 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000049 - Cluster 123 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000049 - Gene Cluster 123. Type = cyclopeptide. Location: 415421 - 589414 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

No repeats detected in this cluster.

Similar gene clusters

JBBPBL010000049 - Cluster 124 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000049 - Gene Cluster 124. Type = saccharide. Location: 2334017 - 2534190 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000049 - Cluster 125 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000049 - Gene Cluster 125. Type = cyclopeptide. Location: 6596550 - 7018415 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Similar gene clusters

JBBPBL010000049 - Cluster 126 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000049 - Gene Cluster 126. Type = cyclopeptide. Location: 12627688 - 13801352 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_135409
Repeat occurs 4 times in a sequence of 574 amino acids
Location between 13213257 and 13215782
Coverage of 4.18 %
Instances:
DSFKNY | DSFKAY | DSFSSY | DSFQSY |
pattern: DSF[SKQ][ANS]Y
MVVQVFCTGTSQAKENPFTPKASLIRYWNNHISSNLPKPLFLFSKASPLTAVDSAKLTQLADH
NSLSSHIEAFCSLADLFCLSQELELKLDAVGKGGKDASFAVYSSKSFTGYGRSRRGGVDSFKNY
SDGINTPNESFKKYSGGSNGHREEFTSYAKDANVAVDNFTNYGSGQFNNYQERVNVPNLRFTSY
DSDSNSHKLSFSSYGSETNAGSQAFINYGKKGKSVPAEFTSYSGNANTIGSSFTGYGVLGNSAN
DSFKAYGDSGNNPHNSFKTYGLASKSGIDSFSSYRDSANVGDDSFQSYARDSNSGKVDFANYGK
TFNVGNSTFKEYGISFAGYSKETAPSPVSGISVNRWVEPGKFFRESVLKQGSVMVMPDIEDKMP
RRSFLPRGISSKLPFSTSESDLSELKRIFGPSMEPVLLNALSECERPASRGETKRCVGSVEDMI
DFATSVLGRGVTVRTTENVRGSKQEIMIGEVKGINGGEVTESVSCHRSLYPYLLYYCHSVPKVR
VYEAGILDVRSRSKINQGVAICHLDTSAWSPTHGAFVALGSSPGRIEVCHWIFENDMTWTVVD

Similar gene clusters

JBBPBL010000052 - Cluster 127 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000052 - Gene Cluster 127. Type = cyclopeptide. Location: 5694193 - 6051955 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_089708
Repeat occurs 14 times in a sequence of 457 amino acids
Location between 5864076 and 5865527
Coverage of 45.95 %
Instances:
LSSQLAKELENKYLS | LSSQLAKELENKYLS | LSSQLAKELENKYLS | LSSQLAKELENKYLS | LSSQLAKELENKYLS
LSSQLAKELENKYLS | LSSQLAKELENKYLS | LSSQLAKELENKYLS | LSSQLAKELENKYLS | LSSQLAKELENKYLS
LSSQLAKELENKYLS | LSSQLAKELENKYLS | LSSQLAKELENKYLS | LSSQLAKELENKYLS |
pattern: LSSQLAKELENKYLS
MDLLHSYLALLLLLCGSGIYAVKDLRGNQGQGNVKEVEEKYSSVANWRSAAENNPDLSSQLAK
ELENKYLSLSGFKIDVDKDPELSSQLAKELENKYLSLSGFKTDVDKDPELSSQLAKELENKYLS
LSGFKTDVDKDPELSSQLAKELENKYLSLSGFKTDVDKDPELSSQLAKELENKYLSLSGFKTDV
DKDPELSSQLAKELENKYLSFSGFKTDVDKDPELSSQLAKELENKYLSLSGFKTDVDKDPELSS
QLAKELENKYLSLSGFKTDVDKDPELSSQLAKELENKYLSLSGFKTDVDKDPELSSQLAKELEN
KYLSLSGFKTDVDKDPELSSQLAKELENKYLSLSGFKTDVDKDPELSSQLAKELENKYLSLSGF
KTDVDKDPELSSQLAKELENKYLSLSGFKTDVDKDPELSSQLAKELENKYLSLSGLKSSPFVKG
LDEKSSFVNL

Similar gene clusters

JBBPBL010000052 - Cluster 128 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000052 - Gene Cluster 128. Type = cyclopeptide. Location: 12187437 - 12593521 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_090408
Repeat occurs 10 times in a sequence of 1156 amino acids
Location between 12532213 and 12542367
Coverage of 6.06 %
Instances:
NPSQVPP | NPSIEAP | NPSIEAP | NPSIEAP | NPSIEAP
NPSHVPS | NPSIEAP | NPSIEAP | NPSIEAP | NPSIEAP

pattern: NPS[QHI][EV][AP][SP]
MASCCSKISPIIPIFVFFLLASSPIRVARSSSETNNPHAKNQTFRPEQELQKLKISPDGDIID
CVLLRHQPGFDHPQLKGKKPLAPPERPNGHNTKATMAAEDFQMWRMSGETCPEGTIPIRRTTEQ
DMLRANSVTSFGKKPAQVVRRDTTSNDHEHAIGYLSGDEYYGAKASINVWAPNVTNQYEFSLSQ
IWVISGSFGDDLNTIEAGWQALQVSPELYGDYYPRFFTYWTSDAYQATGCYNLLCSGFVQTNNR
IAIGAAISPTSSYGVGQFDISLLIWKDPKHGNWWLEFESGIIVGYWPSFLFTHLSDHASMVQFG
GEVVNSSPGGSHTATEMGSGHFAGEGFGKASYFRNLQVVDWDNNLIPLPDLKSQSPPFQTNPSQ
VPPPPPPVTKSNPKPQQPPAVTKPNPSIEAPPPATKSNPQPRQTPEVTKPNPSIEAPLPATKSN
PQPHQPLEVTQPNPSIEAPLPAPKSNPQPPEVIKPNPSIEAPQAPPKVTVVTPVASTPKPLTEH
RQDPKSLNPLSHCDVPIYASDFVKTGRYCWCTMENYDNGSFEKIRRAATSYDFMEVDKNCCDAF
WAAYDTCGIIFERMVQFGGEVVNSSPGGSHTSTEMGSGHFAGEDFGKASCFRNLQVVDWDNNLI
PLRDLESPSPPFQTNPSHVPSAPPPVTKSNPQPQQPPVVTKPNPSIEAPSPATESNPQPCQTPE
VTKPNPSIEAPLPATKSNPQPRQPLEVTQPNPSIEAPLSAPKSNSQPSEVIKPNPSIEAPPKVP
VGTPPLSHCDVPIYASNFVKTDPSGTNGDDLPPIVLVHGIFGFGKGKLGSFSYFAGAEKKDERV
LVPDLGSLTSIYDRACELFYYLKGGQVDYGHYPEWDEDHPIHFVGHSAGTQVVRVLQQMLADKE
FKGYQNTSEHWILSITSLSGAFNGTTRTYFDGMQPDDGKTMKPVSLIQLCRIGVIMYDWLDIPW
LKAYYNFGFDHFNMSRKKLGLWGLVDCLLGNAGPFTAGDWILSDLTLQGSMEMNRRLQTFPDTF
YFSYATKRTRKILGVTVPSDILGIHPLLFIRALQMSQWRHPPDVPPPYKGYRYMREYTYSQIRS
YGLCVEAFESICRDKDWQDNDGALNTISMTHPRLPFEHPSRLVVNDSDCLPLQPGIWLALCTSN
FLQNP

Similar gene clusters

JBBPBL010000053 - Cluster 129 - Alkaloid

Gene cluster description

Download cluster GenBank file
JBBPBL010000053 - Gene Cluster 129. Type = alkaloid. Location: 11082649 - 11327380 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000053 - Cluster 130 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000053 - Gene Cluster 130. Type = cyclopeptide. Location: 12356821 - 13245977 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Similar gene clusters

JBBPBL010000054 - Cluster 131 - Putative

Gene cluster description

Download cluster GenBank file
JBBPBL010000054 - Gene Cluster 131. Type = putative. Location: 2304706 - 2453833 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000054 - Cluster 132 - Terpene-saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000054 - Gene Cluster 132. Type = terpene-saccharide. Location: 3245899 - 3316902 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000054 - Cluster 133 - Terpene

Gene cluster description

Download cluster GenBank file
JBBPBL010000054 - Gene Cluster 133. Type = terpene. Location: 6758909 - 6856673 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000054 - Cluster 134 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000054 - Gene Cluster 134. Type = saccharide. Location: 6930333 - 6956152 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000057 - Cluster 135 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000057 - Gene Cluster 135. Type = cyclopeptide. Location: 534123 - 819800 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_066351
Repeat occurs 4 times in a sequence of 304 amino acids
Location between 573890 and 576820
Coverage of 7.89 %
Instances:
APTPDC | APTAVP | APTPDC | APTPSA |
pattern: APT[AP][SVD][CAP]
MINTVAAILVITLCSATATSSAAQAPAAAPTPDCMTSLLNLSDCLTYVEAGSNLTKPDKPCCP
ELAGLVESSPQCLCYLLDKNATASYGLNISMDRALKLPTVCGVSTPPVSLCSVINGAPTAVPTP
STEGFTSPAPEPEGATAFGQSPAVEAPTPDCMTNLLNLSDCLTYVEAGSNLTKPDKPCCPELAG
LVESSPQCLCYLLDKNKTASYGLSIDMDRALKLPNVCGVSTPPVSLCSVINGGPTGAPTPSAGA
SISPGLAQESAAAPSPSNGNTPGGSNIAIPGLASLFALPIAFLPILVGI

Similar gene clusters

JBBPBL010000057 - Cluster 136 - Lignan

Gene cluster description

Download cluster GenBank file
JBBPBL010000057 - Gene Cluster 136. Type = lignan. Location: 850079 - 948142 nt. Click on genes for more information.
Show pHMM detection rules used
plants/lignan: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Dirigent]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000057 - Cluster 137 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000057 - Gene Cluster 137. Type = saccharide. Location: 3051761 - 3116013 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000059 - Cluster 138 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000059 - Gene Cluster 138. Type = cyclopeptide. Location: 8799273 - 9565538 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_133347
Repeat occurs 8 times in a sequence of 444 amino acids
Location between 9208391 and 9212462
Coverage of 12.61 %
Instances:
KDLEDNY | KDLKGVE | KDLEDKY | KDLKDDE | KDLEDKY
KDLKGKY | KDLEDKY | KDLKGKS |
pattern: KDL[EK][GD][NKVD][ESY]
MAQAEPVVVLCMASNHRERRLPSPKNGSTQLSKETDCDRGNAARDFNGKYTVDYLPKTTGDYT
KDLEDNYAYPYFHKTTNNVVKDLKGVEMKDLEDKYAYLCFYKTTINDMKDDKMKDLKDDEMKDL
EDKYTYIYIHKTITNEMKDLKGKYIYPYFHKSTINYMNDAEMKDLEDKYTPIYIHKTITDYLKE
NEMKDLKGKSTSDEMEDESAKLGLFTLDQLRGFSVGKKMPIFFPIKDHSLYPPSLPKEVADTIP
FSSSQVSNILHLFSVSPDSPKAKAVQGTLKICELEAAEGETKVCATSLESLHGFLSNVFGPDVD
FKSLSTRHPTMTTPILQNYTVLESPREIESPKKVACHPMPYLYAVYFCHFDATETKAFKFQLVG
DITGDKVDAVVLSHMDTSGWSSDHVAFRMLGIKLGDVVCHVFSQGNVVWINQPSANTVRAA

Similar gene clusters

Similar known gene clusters

JBBPBL010000061 - Cluster 139 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000061 - Gene Cluster 139. Type = cyclopeptide. Location: 6057321 - 7063761 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_080547
Repeat occurs 4 times in a sequence of 73 amino acids
Location between 6105708 and 6106037
Coverage of 32.88 %
Instances:
YPSQEA | YPSPGY | YPSQDY | YPSQGY |
pattern: YPS[QP][EGD][AY]
MLALDYLPPSGYPSQEAYPPSGYSHQDAYPSPGYPSQDYLSQGYYPSQGYPTQEYPPPYAPQK
EKHDGCLEGW
Repeat found in V6N13_080587
Repeat occurs 15 times in a sequence of 422 amino acids
Location between 6526869 and 6528325
Coverage of 53.32 %
Instances:
FLKDFDPNRPQYNYL | FLKDFDPNRPQYNYL | FLKDFDPNRPQYNYL | FLKDFDPNRPQYNYL | FLKDFDPNRPQYNYL
FLKEFDPNRPQYNYL | FLKEFDPNRPQYNYL | FLKDFNPNRPQYNYL | FLKDFDPNRPQYNYL | FLKEFDPNRPQYNYL
FLKDFDPNRPQYNYL | FLKDFDPNRPQYNYL | FLKEFDPNRPQYNYL | FLKEFDPNRPQYNYL | FLKEFDPNRPQYNYL

pattern: FLK[ED]F[ND]PNRPQYNYL
MKPSLAFFALLCILLFAQTNAARKVLEEESNKEMKEKIMPEADKSFLKDFDPNRPQYNYLSQE
AMKNAFLKDFDPNRPQYNYLSQEAMKNTFLKDFDPNRPQYNYLSQEDMKKAFLKDFDPNRPQYN
YLSQEAMKNDFLKDFDPNRPQYNYLSQDAMKNTFLKEFDPNRPQYNYLSQDAMKNAFLKEFDPN
RPQYNYLSQEAMKNSFLKDFNPNRPQYNYLSQDAMKNAFLKDFDPNRPQYNYLSQEAMKNAFLK
EFDPNRPQYNYLSQDDMKKAFLKDFDPNRPQYNYLSQDAMKNAFLKDFDPNRPQYNYLSQDAMK
NAFLKEFDPNRPQYNYLSQDAMKNAFLKEFDPNRPQYNYLSQEAMKKTFLKEFDPNRPQYNYLS
QEAMNAMKKDDQSHDSTKKDEQTQETKTSLVMDLAKAVL
Repeat found in V6N13_080590
Repeat occurs 14 times in a sequence of 399 amino acids
Location between 6675878 and 6677259
Coverage of 52.63 %
Instances:
PNRPQYNYLSQEVMK | PNRPQYNYLSQEVMK | PNRPQYNYLSQEAMK | PNRPQYNYLSQEAMK | PNRPQYNYLSQEAMK
PNRPQYNYLSQDAMK | PNRPQYNYLSQEAMK | PNRPQYNYLSQDDMK | PNRPQYNYLSQDAMK | PNRPQYNYLSQDAMK
PNRPQYNYLSQDAMK | PNRPQYNYLSQDAMK | PNRPQYNYLSQDAMK | PNRPQYNYLSQEAMN |
pattern: PNRPQYNYLSQ[ED][AVD]M[NK]
MKSSLAFFALLCILLFAQTNAARKVLEEGTNKEMKEKTMPEADKSFLNDFDPNRPQYNYLSQE
VMKNSFLKDFDPNRPQYNYLSQEVMKNAFLKDFDPNRPQYNYLSQEAMKKAFLKDFDPNRPQYN
YLSQEAMKNAFLKDFDPNRPQYNYLSQEAMKNAFLKDFNPNRPQYNYLSQDAMKNAFLNDIDPN
RPQYNYLSQEAMKNTFLKEFDPNRPQYNYLSQDDMKKAFLKDFDPNRPQYNYLSQDAMKNAFLK
DFDPNRPQYNYLSQDAMKNAFLKDFDPNRPQYNYLSQDAMKKAFLKEFDPNRPQYNYLSQDAMK
NAFLKEFDPNRPQYNYLSQDAMKNAFLKEFDPNRPQYNYLSQEAMNAWKKDDQSHDSTKKDEQT
QETKTSLVMDLAKAVL
Repeat found in V6N13_080591
Repeat occurs 4 times in a sequence of 92 amino acids
Location between 6681578 and 6681857
Coverage of 39.13 %
Instances:
AFLKDFDPN | AFLKDFDPN | AFLKDFDPN | AFLKDFDPN |
pattern: AFLKDFDPN
MKNAFLKDFDPNHPQYNYLSQEEIRKAFLKDFDPNRPQYNYLSQETMKNAFLKDFDPNRPQYN
YLSQEAMKNAFLKDFDPNCPQYNYLSQEA
Repeat found in V6N13_080600
Repeat occurs 14 times in a sequence of 535 amino acids
Location between 6856879 and 6858601
Coverage of 39.25 %
Instances:
KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLMYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY
KDFDPNRPQFPLLYY | KDFDPNRPQFPLIYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY
KDFDPNRPQFPLMYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLMYY | KDFDPNRPQFPLLYY |
pattern: KDFDPNRPQFPL[LMI]YY
MTSFLSIFAVFCILLSAETIAARKAPDRQWTVEADEQPMVEAIKPTQQESFVKDFDPNRPQFP
LLYYSKKDGQSQEPTENDKSFVKDFDPNRPQFPLLYYSKKDGQFQEPTENDKSFVKDFDPNRPQ
FPLMYYSKKDGQSQVPPGTDNSFLKDFDPNRPQFPLLYYSKKDGQSQGPAETDKSFVKDFDPNR
PQFPLLYYSKKDVQSQESTETDKSFIKDFDPNRPQFPLLYYSKKDGQSQELTENDKSFVKDFDP
NRPQFPLIYYSKKDGQSQVPAENDKSFVKDFDPNRPQFPLLYYSKKDGQSQEPTKNDKSFVKDF
DPNRPQFPLLYYSKKDGQSQELTENDKSFVKDFDPNRPQFPLLYYSKKDGQSQEPTENDKSFVK
DFDPNRPQFPLMYYSKKDGQSQAPAETDKSFLKDFDPNRPQFPLLYYSKKDGQSQEPTENDKSF
VKDFDPNRPQFPLMYYSKKDGQSQVPAETDKSFVKDFDPNRPQFPLLYYSKKDGRSQEVAENDK
SFVNDSESKLSEVEKAFVEVLENI
Repeat found in V6N13_080602
Repeat occurs 14 times in a sequence of 535 amino acids
Location between 6901921 and 6903643
Coverage of 39.25 %
Instances:
KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLMYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY
KDFDPNRPQFPLLYY | KDFDPNRPQFPLIYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY
KDFDPNRHQFPLMYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLMYY | KDFDPNRPQFPLLYY |
pattern: KDFDPNR[HP]QFPL[LMI]YY
MTSFLSIFAVFCILLSAETIAARKAPDRQWTVEADEQPMVEAIKPTQQESFVKDFDPNRPQFP
LLYYSKKDGQSQEPTENDKSFVKDFDPNRPQFPLLYYSKKDGQFQEPTENDKSFVKDFDPNRPQ
FPLMYYSKKDGQSQVPPGTDNSFLKDFDPNRPQFPLLYYSKKDGQSQGPAETDKSFVKDFDPNR
PQFPLLYYSKKDVQSQESTETDKSFIKDFDPNRPQFPLLYYSKKDGQSQELTENDKSFVKDFDP
NRPQFPLIYYSKKDGQSQVPAENDKSFLKDFDPNRPQFPLLYYSKKDGQSQEPTKNDKSFVKDF
DPNRPQFPLLYYSKKDGQSQELTENDKSFVKDFDPNRPQFPLLYYSKKDGQSQEPTENDKSFVK
DFDPNRHQFPLMYYSKKDGQSQAPAETDKSFLKDFDPNRPQFPLLYYSKKDGQSQEPTENDKSF
VKDFDPNRPQFPLMYYSKKDGQSQVPAETNKSFVKDFDPNRPQFPLLYYSKKDGRSQEVAENDK
SFVNDSESKLSEVEKAFVEVLENI
Repeat found in V6N13_080605
Repeat occurs 14 times in a sequence of 535 amino acids
Location between 6956656 and 6958378
Coverage of 39.25 %
Instances:
KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLMYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY
KDFDPNRPQFPLLYY | KDFDPNRPQFPLIYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY
KDFDPNRPQFPLMYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLMYY | KDFDPNRPQFPLLYY |
pattern: KDFDPNRPQFPL[LMI]YY
MTSFLSIFAVFCILLSAETIAARKAPDRQWTVEADEQPMVEAIKPTQQESFVKDFDPNRPQFP
LLYYSKKDGQSQEPTENDKSFVKDFDPNRPQFPLLYYSKKDGQFQEPTENDKSFVKDFDPNRPQ
FPLMYYSKKDGQSQVPPGTDNSFLKDFDPNRPQFPLLYYSKKDGQSQGPAETDKSFVKDFDPNR
PQFPLLYYSKKDVQSQESTETDKSFIKDFDPNRPQFPLLYYSKKDGQSQELTENDKSFVKDFDP
NRPQFPLIYYSKKDGQSQVPAENDKSFVKDFDPNRPQFPLLYYSKKDGQSQEPTKNDKSFVKDF
DPNRPQFPLLYYSKKDGQSQELTENDKSFVKDFDPNRPQFPLLYYSKKDGQSQEPTENDKSFVK
DFDPNRPQFPLMYYSKKDGQSQAPAETDKSFLKDFDPNRPQFPLLYYSKKDGQSQEPTENDKSF
VKDFDPNRPQFPLMYYSKKDGQSQVPAETDKSFVKDFDPNRPQFPLLYYSKKDGRSQEVAENDK
SFVNDSESKLSEVEKAFVEVLENI
Repeat found in V6N13_080607
Repeat occurs 14 times in a sequence of 535 amino acids
Location between 7003720 and 7005442
Coverage of 39.25 %
Instances:
KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLMYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY
KDFDPNRPQFPLLYY | KDFDPNRPQFPLIYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY
KDFDPNRPQFPLMYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLMYY | KDFDPNRPQFPLLYY |
pattern: KDFDPNRPQFPL[LMI]YY
MTCFLSIFAVFCILLSAETIAARKAPDRQWTVEADEQPMVEAIKPTQQESFVKDFDPNRPQFP
LLYYSKKDGQSQEPTENDKSFVKDFDPNRPQFPLLYYSKKDGQFQEPTENDKSFVKDFDPNRPQ
FPLMYYSKKDGQSQVPPGTDNSFLKDFDPNRPQFPLLYYSKKDGQSQGPAETDKSFVKDFDPNR
PQFPLLYYSKKDVQSQESTETDKSFIKDFDPNRPQFPLLYYSKKDGQSQELTENDKSFVKDFDP
NRPQFPLIYYSKKDGQSQVPAENDKSFVKDFDPNRPQFPLLYYSKKDGQSQEPTKNDKSFVKDF
DPNRPQFPLLYYSKKDGQSQELTENDKSFVKDFDPNRPQFPLLYYSKKDGQSQEPTENDKSFVK
DFDPNRPQFPLMYYSKKDGQSQAPAETDKSFLKDFDPNRPQFPLLYYSKKDGQSQEPTENDKSF
VKDFDPNRPQFPLMYYSKKDGQSQVPAETDKSFVKDFDPNRPQFPLLYYSKKDGRSQEVAENDK
SFVNDSESKLSEVEKAFVEVLENI
Repeat found in V6N13_080609
Repeat occurs 17 times in a sequence of 634 amino acids
Location between 7058195 and 7060213
Coverage of 40.22 %
Instances:
SFVKDFDPNRPQFPL | SFVKDFDPNRPQFPL | SFVKDFDPNRPQFPL | SFVKDFDPNRPQFPL | SFVKDFDPNRPQFPL
SFVKDFDPNRPQFPL | SFVKDFDPNRPQFPL | SFVKDFDPNRPQFPL | SFVKDFDPNRPQFPL | SFVKDFDPNRPQFPL
SFVKDFDPNRPQFPL | SFVKDFDPNRPQFPL | SFVKDFDPNRPQFPL | SFVKDFDPNRPQFPL | SFVKDFDPNRPQFPL
SFVKDFDPNRPQFPL | SFVNDSESKLSEVEK |
pattern: SFV[NK]D[SF][ED][SP][NK][LR][SP][EQ][VF][EP][LK]
MTSFLSIFAVFCILLSAETIAARKAPDRQWTVEADEQPMVEAIKPTQQESFVKDFDPNRPQFP
LLYYSKKDDQSQEPTENDKSFVKDFDPNRPQFPLMYYSKKDGQSQVPVETDESFVKDFDPNRPQ
FPLLYYSKKDGQSQEPTENDKSFVKDFDPNRPQFPLMYYSKKDGQSQVPAETDESFVKDFDPNR
PQFPLLYYSKKDGQFQEPTENDKSFVKDFDPNRPQFPLMYYSKKDGQSQVPAETYESFVKDFDP
NRPQFPLLYYSKKDGQSQEPTENDKSFVKDFDPNRPQFPLMYYSKKDGQSQVPPGTDNSFVKDF
DPNRPQFPLLYYSKKDGQSQGPAETDKSFVKDFDPNRPQFPLLYYSKKDVQSQEPTETDKSFVK
DFDPNRPQFPLLYYSKKDGQSQELTENDKSFVKDFDPNRPQFPLMYYSKKDGQSQVPADNDKSF
VKDFDPNRPQFPLLYYSKKDGQSQEPTENDKSFVKDFDPNRPQFPLMYYSKKDGQSQAPAETDK
SFLKDFDPNRPQFPLLYYSKKDGQSQEPTENEKSFVKDFDPNRPQFPLMYYSKKDGQSQVPAET
DKSFVKDFDPNRPQFPLLYYSKKDGRSQEVAENDKSFVNDSESKLSEVEKACVEVLENI

Similar gene clusters

JBBPBL010000061 - Cluster 140 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000061 - Gene Cluster 140. Type = cyclopeptide. Location: 6338322 - 7626104 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_080587
Repeat occurs 15 times in a sequence of 422 amino acids
Location between 6526869 and 6528325
Coverage of 53.32 %
Instances:
FLKDFDPNRPQYNYL | FLKDFDPNRPQYNYL | FLKDFDPNRPQYNYL | FLKDFDPNRPQYNYL | FLKDFDPNRPQYNYL
FLKEFDPNRPQYNYL | FLKEFDPNRPQYNYL | FLKDFNPNRPQYNYL | FLKDFDPNRPQYNYL | FLKEFDPNRPQYNYL
FLKDFDPNRPQYNYL | FLKDFDPNRPQYNYL | FLKEFDPNRPQYNYL | FLKEFDPNRPQYNYL | FLKEFDPNRPQYNYL

pattern: FLK[ED]F[ND]PNRPQYNYL
MKPSLAFFALLCILLFAQTNAARKVLEEESNKEMKEKIMPEADKSFLKDFDPNRPQYNYLSQE
AMKNAFLKDFDPNRPQYNYLSQEAMKNTFLKDFDPNRPQYNYLSQEDMKKAFLKDFDPNRPQYN
YLSQEAMKNDFLKDFDPNRPQYNYLSQDAMKNTFLKEFDPNRPQYNYLSQDAMKNAFLKEFDPN
RPQYNYLSQEAMKNSFLKDFNPNRPQYNYLSQDAMKNAFLKDFDPNRPQYNYLSQEAMKNAFLK
EFDPNRPQYNYLSQDDMKKAFLKDFDPNRPQYNYLSQDAMKNAFLKDFDPNRPQYNYLSQDAMK
NAFLKEFDPNRPQYNYLSQDAMKNAFLKEFDPNRPQYNYLSQEAMKKTFLKEFDPNRPQYNYLS
QEAMNAMKKDDQSHDSTKKDEQTQETKTSLVMDLAKAVL
Repeat found in V6N13_080590
Repeat occurs 14 times in a sequence of 399 amino acids
Location between 6675878 and 6677259
Coverage of 52.63 %
Instances:
PNRPQYNYLSQEVMK | PNRPQYNYLSQEVMK | PNRPQYNYLSQEAMK | PNRPQYNYLSQEAMK | PNRPQYNYLSQEAMK
PNRPQYNYLSQDAMK | PNRPQYNYLSQEAMK | PNRPQYNYLSQDDMK | PNRPQYNYLSQDAMK | PNRPQYNYLSQDAMK
PNRPQYNYLSQDAMK | PNRPQYNYLSQDAMK | PNRPQYNYLSQDAMK | PNRPQYNYLSQEAMN |
pattern: PNRPQYNYLSQ[ED][AVD]M[NK]
MKSSLAFFALLCILLFAQTNAARKVLEEGTNKEMKEKTMPEADKSFLNDFDPNRPQYNYLSQE
VMKNSFLKDFDPNRPQYNYLSQEVMKNAFLKDFDPNRPQYNYLSQEAMKKAFLKDFDPNRPQYN
YLSQEAMKNAFLKDFDPNRPQYNYLSQEAMKNAFLKDFNPNRPQYNYLSQDAMKNAFLNDIDPN
RPQYNYLSQEAMKNTFLKEFDPNRPQYNYLSQDDMKKAFLKDFDPNRPQYNYLSQDAMKNAFLK
DFDPNRPQYNYLSQDAMKNAFLKDFDPNRPQYNYLSQDAMKKAFLKEFDPNRPQYNYLSQDAMK
NAFLKEFDPNRPQYNYLSQDAMKNAFLKEFDPNRPQYNYLSQEAMNAWKKDDQSHDSTKKDEQT
QETKTSLVMDLAKAVL
Repeat found in V6N13_080591
Repeat occurs 4 times in a sequence of 92 amino acids
Location between 6681578 and 6681857
Coverage of 39.13 %
Instances:
AFLKDFDPN | AFLKDFDPN | AFLKDFDPN | AFLKDFDPN |
pattern: AFLKDFDPN
MKNAFLKDFDPNHPQYNYLSQEEIRKAFLKDFDPNRPQYNYLSQETMKNAFLKDFDPNRPQYN
YLSQEAMKNAFLKDFDPNCPQYNYLSQEA
Repeat found in V6N13_080600
Repeat occurs 14 times in a sequence of 535 amino acids
Location between 6856879 and 6858601
Coverage of 39.25 %
Instances:
KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLMYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY
KDFDPNRPQFPLLYY | KDFDPNRPQFPLIYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY
KDFDPNRPQFPLMYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLMYY | KDFDPNRPQFPLLYY |
pattern: KDFDPNRPQFPL[LMI]YY
MTSFLSIFAVFCILLSAETIAARKAPDRQWTVEADEQPMVEAIKPTQQESFVKDFDPNRPQFP
LLYYSKKDGQSQEPTENDKSFVKDFDPNRPQFPLLYYSKKDGQFQEPTENDKSFVKDFDPNRPQ
FPLMYYSKKDGQSQVPPGTDNSFLKDFDPNRPQFPLLYYSKKDGQSQGPAETDKSFVKDFDPNR
PQFPLLYYSKKDVQSQESTETDKSFIKDFDPNRPQFPLLYYSKKDGQSQELTENDKSFVKDFDP
NRPQFPLIYYSKKDGQSQVPAENDKSFVKDFDPNRPQFPLLYYSKKDGQSQEPTKNDKSFVKDF
DPNRPQFPLLYYSKKDGQSQELTENDKSFVKDFDPNRPQFPLLYYSKKDGQSQEPTENDKSFVK
DFDPNRPQFPLMYYSKKDGQSQAPAETDKSFLKDFDPNRPQFPLLYYSKKDGQSQEPTENDKSF
VKDFDPNRPQFPLMYYSKKDGQSQVPAETDKSFVKDFDPNRPQFPLLYYSKKDGRSQEVAENDK
SFVNDSESKLSEVEKAFVEVLENI
Repeat found in V6N13_080602
Repeat occurs 14 times in a sequence of 535 amino acids
Location between 6901921 and 6903643
Coverage of 39.25 %
Instances:
KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLMYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY
KDFDPNRPQFPLLYY | KDFDPNRPQFPLIYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY
KDFDPNRHQFPLMYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLMYY | KDFDPNRPQFPLLYY |
pattern: KDFDPNR[HP]QFPL[LMI]YY
MTSFLSIFAVFCILLSAETIAARKAPDRQWTVEADEQPMVEAIKPTQQESFVKDFDPNRPQFP
LLYYSKKDGQSQEPTENDKSFVKDFDPNRPQFPLLYYSKKDGQFQEPTENDKSFVKDFDPNRPQ
FPLMYYSKKDGQSQVPPGTDNSFLKDFDPNRPQFPLLYYSKKDGQSQGPAETDKSFVKDFDPNR
PQFPLLYYSKKDVQSQESTETDKSFIKDFDPNRPQFPLLYYSKKDGQSQELTENDKSFVKDFDP
NRPQFPLIYYSKKDGQSQVPAENDKSFLKDFDPNRPQFPLLYYSKKDGQSQEPTKNDKSFVKDF
DPNRPQFPLLYYSKKDGQSQELTENDKSFVKDFDPNRPQFPLLYYSKKDGQSQEPTENDKSFVK
DFDPNRHQFPLMYYSKKDGQSQAPAETDKSFLKDFDPNRPQFPLLYYSKKDGQSQEPTENDKSF
VKDFDPNRPQFPLMYYSKKDGQSQVPAETNKSFVKDFDPNRPQFPLLYYSKKDGRSQEVAENDK
SFVNDSESKLSEVEKAFVEVLENI
Repeat found in V6N13_080605
Repeat occurs 14 times in a sequence of 535 amino acids
Location between 6956656 and 6958378
Coverage of 39.25 %
Instances:
KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLMYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY
KDFDPNRPQFPLLYY | KDFDPNRPQFPLIYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY
KDFDPNRPQFPLMYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLMYY | KDFDPNRPQFPLLYY |
pattern: KDFDPNRPQFPL[LMI]YY
MTSFLSIFAVFCILLSAETIAARKAPDRQWTVEADEQPMVEAIKPTQQESFVKDFDPNRPQFP
LLYYSKKDGQSQEPTENDKSFVKDFDPNRPQFPLLYYSKKDGQFQEPTENDKSFVKDFDPNRPQ
FPLMYYSKKDGQSQVPPGTDNSFLKDFDPNRPQFPLLYYSKKDGQSQGPAETDKSFVKDFDPNR
PQFPLLYYSKKDVQSQESTETDKSFIKDFDPNRPQFPLLYYSKKDGQSQELTENDKSFVKDFDP
NRPQFPLIYYSKKDGQSQVPAENDKSFVKDFDPNRPQFPLLYYSKKDGQSQEPTKNDKSFVKDF
DPNRPQFPLLYYSKKDGQSQELTENDKSFVKDFDPNRPQFPLLYYSKKDGQSQEPTENDKSFVK
DFDPNRPQFPLMYYSKKDGQSQAPAETDKSFLKDFDPNRPQFPLLYYSKKDGQSQEPTENDKSF
VKDFDPNRPQFPLMYYSKKDGQSQVPAETDKSFVKDFDPNRPQFPLLYYSKKDGRSQEVAENDK
SFVNDSESKLSEVEKAFVEVLENI
Repeat found in V6N13_080607
Repeat occurs 14 times in a sequence of 535 amino acids
Location between 7003720 and 7005442
Coverage of 39.25 %
Instances:
KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLMYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY
KDFDPNRPQFPLLYY | KDFDPNRPQFPLIYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY
KDFDPNRPQFPLMYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLMYY | KDFDPNRPQFPLLYY |
pattern: KDFDPNRPQFPL[LMI]YY
MTCFLSIFAVFCILLSAETIAARKAPDRQWTVEADEQPMVEAIKPTQQESFVKDFDPNRPQFP
LLYYSKKDGQSQEPTENDKSFVKDFDPNRPQFPLLYYSKKDGQFQEPTENDKSFVKDFDPNRPQ
FPLMYYSKKDGQSQVPPGTDNSFLKDFDPNRPQFPLLYYSKKDGQSQGPAETDKSFVKDFDPNR
PQFPLLYYSKKDVQSQESTETDKSFIKDFDPNRPQFPLLYYSKKDGQSQELTENDKSFVKDFDP
NRPQFPLIYYSKKDGQSQVPAENDKSFVKDFDPNRPQFPLLYYSKKDGQSQEPTKNDKSFVKDF
DPNRPQFPLLYYSKKDGQSQELTENDKSFVKDFDPNRPQFPLLYYSKKDGQSQEPTENDKSFVK
DFDPNRPQFPLMYYSKKDGQSQAPAETDKSFLKDFDPNRPQFPLLYYSKKDGQSQEPTENDKSF
VKDFDPNRPQFPLMYYSKKDGQSQVPAETDKSFVKDFDPNRPQFPLLYYSKKDGRSQEVAENDK
SFVNDSESKLSEVEKAFVEVLENI
Repeat found in V6N13_080609
Repeat occurs 17 times in a sequence of 634 amino acids
Location between 7058195 and 7060213
Coverage of 40.22 %
Instances:
SFVKDFDPNRPQFPL | SFVKDFDPNRPQFPL | SFVKDFDPNRPQFPL | SFVKDFDPNRPQFPL | SFVKDFDPNRPQFPL
SFVKDFDPNRPQFPL | SFVKDFDPNRPQFPL | SFVKDFDPNRPQFPL | SFVKDFDPNRPQFPL | SFVKDFDPNRPQFPL
SFVKDFDPNRPQFPL | SFVKDFDPNRPQFPL | SFVKDFDPNRPQFPL | SFVKDFDPNRPQFPL | SFVKDFDPNRPQFPL
SFVKDFDPNRPQFPL | SFVNDSESKLSEVEK |
pattern: SFV[NK]D[SF][ED][SP][NK][LR][SP][EQ][VF][EP][LK]
MTSFLSIFAVFCILLSAETIAARKAPDRQWTVEADEQPMVEAIKPTQQESFVKDFDPNRPQFP
LLYYSKKDDQSQEPTENDKSFVKDFDPNRPQFPLMYYSKKDGQSQVPVETDESFVKDFDPNRPQ
FPLLYYSKKDGQSQEPTENDKSFVKDFDPNRPQFPLMYYSKKDGQSQVPAETDESFVKDFDPNR
PQFPLLYYSKKDGQFQEPTENDKSFVKDFDPNRPQFPLMYYSKKDGQSQVPAETYESFVKDFDP
NRPQFPLLYYSKKDGQSQEPTENDKSFVKDFDPNRPQFPLMYYSKKDGQSQVPPGTDNSFVKDF
DPNRPQFPLLYYSKKDGQSQGPAETDKSFVKDFDPNRPQFPLLYYSKKDVQSQEPTETDKSFVK
DFDPNRPQFPLLYYSKKDGQSQELTENDKSFVKDFDPNRPQFPLMYYSKKDGQSQVPADNDKSF
VKDFDPNRPQFPLLYYSKKDGQSQEPTENDKSFVKDFDPNRPQFPLMYYSKKDGQSQAPAETDK
SFLKDFDPNRPQFPLLYYSKKDGQSQEPTENEKSFVKDFDPNRPQFPLMYYSKKDGQSQVPAET
DKSFVKDFDPNRPQFPLLYYSKKDGRSQEVAENDKSFVNDSESKLSEVEKACVEVLENI
Repeat found in V6N13_080616
Repeat occurs 14 times in a sequence of 490 amino acids
Location between 7185649 and 7187301
Coverage of 42.86 %
Instances:
PNRPQFPFVYHLRKD | PNRPQFPFVYHLRKD | PNRPQFPFVYHLRKE | PNRPQFPFVYHLRKD | PNRPQFPFVYHLRND
PNRPQFPFVYHLRKE | PNRPQFPFVYHLRKD | PNRPQFPFVYHLRKE | PNRPQFPIIYNLRKD | PNRPQFPFVYHLRKE
PNRPQFPFVYHLRKD | PNRPQFPFVYHLRKD | PNRPQFPFVYYLKKE | PNRPQFPFVYHLKKD |
pattern: PNRPQFP[FI][VI]Y[NYH]L[KR][NK][ED]
MKSFLFFFALFCILLLAKTIAARKDPGGQWTDETKEQPLVEAINPTKHESFVKDFDPNRPQFP
FVYHLRKDDLSQEQAENDKSFVKDFGPNRPQFPFVYHLRKDDLSQEQAKNDKSFVKDFDPNRPQ
FPFVYHLRKEKAANDKSFVKDFDPNRPQFPFVYHLRKDDLSQEQAENDKSFVKDFDPNRPQFPF
VYHLRNDDLSQEQAENDKSFVKYFDPNRPQFPFVYHLRKEEAANDKSFVKDFNPNRPQFPFVYH
LRKDDLSQEQAENDKSFFKDFDPNRPQFPFVYHLRKEEVANDKSFVKDFDPNRPQFPIIYNLRK
DDLPQEKAENDKSFVKDFDPNRPQFPFVYHLRKEEAANDKSFVKDFDPNRPQFPFVYHLRKDDQ
SQEQDENGKSFVKDFDPNRPQFPFVYHLRKDDHSQEQAANDRSFVKDFDPNRPQFPFVYYLKKE
DHSQEQAENDKSFVKDFDPNRPQFPFVYHLKKDGCLENKWFDV
Repeat found in V6N13_080617
Repeat occurs 16 times in a sequence of 537 amino acids
Location between 7351671 and 7353412
Coverage of 35.75 %
Instances:
QFPFIYHLRKDD | QFPFVYHLRNDG | QFPFVYHLRGKE | QFPFVYHLRNDD | QFPFVYHLRKEE
QFPFVYHLRKKE | QFPFVYHLRNDD | QFPFVYHLRKEE | QFPFVYHLRKDD | QFPFVYHLRKEE
QFPFVYNLRKDD | QFPFVYHLRKEE | QFPFVYHLRKDD | QFPFVYHLRKDD | QFPFVYHLKKDD
QFPFIYHLKKDD |
pattern: QFPF[VI]Y[NH]L[KR][NGK][EKD][EGD]
MKSFLFFFALFCILLLAKPIAARKDPGGQSTDETKEQSLVEAINPTKQESFVKDFDPNRPQFP
FIYHLRKDDHSQEQAENEKSFIKDFKPNRPQFPFVYHLRNDGLSQEQAENDKSFVKDFDPNRHQ
FPFVYHLRGKEVANDKSFVKDFDPNRPQFPFVYHLRNDDLSQEQVENDKSFVKDFDPNHPQFPF
VYHLRKEEAANDKSFVKDFDPNRPQFPFVYHLRKKEVANDKSFVKDFAPNRPQFPFVYHLRNDD
LSQEQAENDKSFVKDFDPNRPQFPFVYHLRKEEAANDKSFVKDFDPNRPQFPFVYHLRKDDLYQ
EQAENDKSFVKDFDPNRPQFPFVYHLRKEEVANDKSFVKDFNPNHPQFPFVYNLRKDDLSQEQA
ENEKSFVKDFDPNRPQFPFVYHLRKEEAVNDKSFVKYFDPNRPQFPFVYHLRKDDHSQEQAGND
KSFVKDFDPNRPQFPFVYHLRKDDHSQEQAANGRSFVKDFDPNRPQFPFVYHLKKDDHSQEQVE
NDKSFVKYFDPNRPQFPFIYHLKKDD
Repeat found in V6N13_080623
Repeat occurs 16 times in a sequence of 546 amino acids
Location between 7467102 and 7468870
Coverage of 35.16 %
Instances:
QFPFIYHLRKDD | QFPFVYHLRNDG | QFPFVYHLRGKE | QFPFVYHLRNDD | QFPFVYHLRKEE
QFPFVYHLRKKE | QFPFVYHLRNDD | QFPFVYHLRKEE | QFPFVYHLRKDD | QFPFVYHLRKEE
QFPFVYNLRKDD | QFPFVYHLRKEE | QFPFVYHLRKDD | QFPFVYHLRKDD | QFPFVYHLKKDD
QFPFVYHLKKDD |
pattern: QFPF[VI]Y[NH]L[KR][NGK][EKD][EGD]
MKSFLFFFALFCILLLAKPIAARKDPGGQSTDETKEQSLVEAINPTKQESFVKDFDPNRPQFP
FIYHLRKDDHSQEQAENEKSFIKDFKPNRPQFPFVYHLRNDGLSQEQAENDKSFVKDFDPNRHQ
FPFVYHLRGKEVANDKSFVKDFDPNRPQFPFVYHLRNDDLSQEQVENDKSFVKDFDPNHPQFPF
VYHLRKEEAANDKSFVKDFDPNRPQFPFVYHLRKKEVANDKSFVKDFAPNRPQFPFVYHLRNDD
LSQEQAENDKSFVKDFDPNRPQFPFVYHLRKEEAANDKSFVKDFDPNRPQFPFVYHLRKDDLYQ
EQAENDKSFVKDFDPNRPQFPFVYHLRKEEVANDKSFVKDFDPNHPQFPFVYNLRKDDLSQEQA
ENEKSFVKDFDPNRPQFPFVYHLRKEEAVNDKSFVKYFDPNRPQFPFVYHLRKDDHSQEKAGNG
KSFVKDFDPNRPQFPFVYHLRKDDHSQEQAANDRSFVKDFDPNRPQFPFVYHLKKDDHSQEQVE
DDKSFVKYFDLNRPQFPFVYHLKKDDCLKNKRFDV

Similar gene clusters

JBBPBL010000061 - Cluster 141 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000061 - Gene Cluster 141. Type = cyclopeptide. Location: 6957270 - 8127726 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_080607
Repeat occurs 14 times in a sequence of 535 amino acids
Location between 7003720 and 7005442
Coverage of 39.25 %
Instances:
KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLMYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY
KDFDPNRPQFPLLYY | KDFDPNRPQFPLIYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY
KDFDPNRPQFPLMYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLMYY | KDFDPNRPQFPLLYY |
pattern: KDFDPNRPQFPL[LMI]YY
MTCFLSIFAVFCILLSAETIAARKAPDRQWTVEADEQPMVEAIKPTQQESFVKDFDPNRPQFP
LLYYSKKDGQSQEPTENDKSFVKDFDPNRPQFPLLYYSKKDGQFQEPTENDKSFVKDFDPNRPQ
FPLMYYSKKDGQSQVPPGTDNSFLKDFDPNRPQFPLLYYSKKDGQSQGPAETDKSFVKDFDPNR
PQFPLLYYSKKDVQSQESTETDKSFIKDFDPNRPQFPLLYYSKKDGQSQELTENDKSFVKDFDP
NRPQFPLIYYSKKDGQSQVPAENDKSFVKDFDPNRPQFPLLYYSKKDGQSQEPTKNDKSFVKDF
DPNRPQFPLLYYSKKDGQSQELTENDKSFVKDFDPNRPQFPLLYYSKKDGQSQEPTENDKSFVK
DFDPNRPQFPLMYYSKKDGQSQAPAETDKSFLKDFDPNRPQFPLLYYSKKDGQSQEPTENDKSF
VKDFDPNRPQFPLMYYSKKDGQSQVPAETDKSFVKDFDPNRPQFPLLYYSKKDGRSQEVAENDK
SFVNDSESKLSEVEKAFVEVLENI
Repeat found in V6N13_080609
Repeat occurs 17 times in a sequence of 634 amino acids
Location between 7058195 and 7060213
Coverage of 40.22 %
Instances:
SFVKDFDPNRPQFPL | SFVKDFDPNRPQFPL | SFVKDFDPNRPQFPL | SFVKDFDPNRPQFPL | SFVKDFDPNRPQFPL
SFVKDFDPNRPQFPL | SFVKDFDPNRPQFPL | SFVKDFDPNRPQFPL | SFVKDFDPNRPQFPL | SFVKDFDPNRPQFPL
SFVKDFDPNRPQFPL | SFVKDFDPNRPQFPL | SFVKDFDPNRPQFPL | SFVKDFDPNRPQFPL | SFVKDFDPNRPQFPL
SFVKDFDPNRPQFPL | SFVNDSESKLSEVEK |
pattern: SFV[NK]D[SF][ED][SP][NK][LR][SP][EQ][VF][EP][LK]
MTSFLSIFAVFCILLSAETIAARKAPDRQWTVEADEQPMVEAIKPTQQESFVKDFDPNRPQFP
LLYYSKKDDQSQEPTENDKSFVKDFDPNRPQFPLMYYSKKDGQSQVPVETDESFVKDFDPNRPQ
FPLLYYSKKDGQSQEPTENDKSFVKDFDPNRPQFPLMYYSKKDGQSQVPAETDESFVKDFDPNR
PQFPLLYYSKKDGQFQEPTENDKSFVKDFDPNRPQFPLMYYSKKDGQSQVPAETYESFVKDFDP
NRPQFPLLYYSKKDGQSQEPTENDKSFVKDFDPNRPQFPLMYYSKKDGQSQVPPGTDNSFVKDF
DPNRPQFPLLYYSKKDGQSQGPAETDKSFVKDFDPNRPQFPLLYYSKKDVQSQEPTETDKSFVK
DFDPNRPQFPLLYYSKKDGQSQELTENDKSFVKDFDPNRPQFPLMYYSKKDGQSQVPADNDKSF
VKDFDPNRPQFPLLYYSKKDGQSQEPTENDKSFVKDFDPNRPQFPLMYYSKKDGQSQAPAETDK
SFLKDFDPNRPQFPLLYYSKKDGQSQEPTENEKSFVKDFDPNRPQFPLMYYSKKDGQSQVPAET
DKSFVKDFDPNRPQFPLLYYSKKDGRSQEVAENDKSFVNDSESKLSEVEKACVEVLENI
Repeat found in V6N13_080616
Repeat occurs 14 times in a sequence of 490 amino acids
Location between 7185649 and 7187301
Coverage of 42.86 %
Instances:
PNRPQFPFVYHLRKD | PNRPQFPFVYHLRKD | PNRPQFPFVYHLRKE | PNRPQFPFVYHLRKD | PNRPQFPFVYHLRND
PNRPQFPFVYHLRKE | PNRPQFPFVYHLRKD | PNRPQFPFVYHLRKE | PNRPQFPIIYNLRKD | PNRPQFPFVYHLRKE
PNRPQFPFVYHLRKD | PNRPQFPFVYHLRKD | PNRPQFPFVYYLKKE | PNRPQFPFVYHLKKD |
pattern: PNRPQFP[FI][VI]Y[NYH]L[KR][NK][ED]
MKSFLFFFALFCILLLAKTIAARKDPGGQWTDETKEQPLVEAINPTKHESFVKDFDPNRPQFP
FVYHLRKDDLSQEQAENDKSFVKDFGPNRPQFPFVYHLRKDDLSQEQAKNDKSFVKDFDPNRPQ
FPFVYHLRKEKAANDKSFVKDFDPNRPQFPFVYHLRKDDLSQEQAENDKSFVKDFDPNRPQFPF
VYHLRNDDLSQEQAENDKSFVKYFDPNRPQFPFVYHLRKEEAANDKSFVKDFNPNRPQFPFVYH
LRKDDLSQEQAENDKSFFKDFDPNRPQFPFVYHLRKEEVANDKSFVKDFDPNRPQFPIIYNLRK
DDLPQEKAENDKSFVKDFDPNRPQFPFVYHLRKEEAANDKSFVKDFDPNRPQFPFVYHLRKDDQ
SQEQDENGKSFVKDFDPNRPQFPFVYHLRKDDHSQEQAANDRSFVKDFDPNRPQFPFVYYLKKE
DHSQEQAENDKSFVKDFDPNRPQFPFVYHLKKDGCLENKWFDV
Repeat found in V6N13_080617
Repeat occurs 16 times in a sequence of 537 amino acids
Location between 7351671 and 7353412
Coverage of 35.75 %
Instances:
QFPFIYHLRKDD | QFPFVYHLRNDG | QFPFVYHLRGKE | QFPFVYHLRNDD | QFPFVYHLRKEE
QFPFVYHLRKKE | QFPFVYHLRNDD | QFPFVYHLRKEE | QFPFVYHLRKDD | QFPFVYHLRKEE
QFPFVYNLRKDD | QFPFVYHLRKEE | QFPFVYHLRKDD | QFPFVYHLRKDD | QFPFVYHLKKDD
QFPFIYHLKKDD |
pattern: QFPF[VI]Y[NH]L[KR][NGK][EKD][EGD]
MKSFLFFFALFCILLLAKPIAARKDPGGQSTDETKEQSLVEAINPTKQESFVKDFDPNRPQFP
FIYHLRKDDHSQEQAENEKSFIKDFKPNRPQFPFVYHLRNDGLSQEQAENDKSFVKDFDPNRHQ
FPFVYHLRGKEVANDKSFVKDFDPNRPQFPFVYHLRNDDLSQEQVENDKSFVKDFDPNHPQFPF
VYHLRKEEAANDKSFVKDFDPNRPQFPFVYHLRKKEVANDKSFVKDFAPNRPQFPFVYHLRNDD
LSQEQAENDKSFVKDFDPNRPQFPFVYHLRKEEAANDKSFVKDFDPNRPQFPFVYHLRKDDLYQ
EQAENDKSFVKDFDPNRPQFPFVYHLRKEEVANDKSFVKDFNPNHPQFPFVYNLRKDDLSQEQA
ENEKSFVKDFDPNRPQFPFVYHLRKEEAVNDKSFVKYFDPNRPQFPFVYHLRKDDHSQEQAGND
KSFVKDFDPNRPQFPFVYHLRKDDHSQEQAANGRSFVKDFDPNRPQFPFVYHLKKDDHSQEQVE
NDKSFVKYFDPNRPQFPFIYHLKKDD
Repeat found in V6N13_080623
Repeat occurs 16 times in a sequence of 546 amino acids
Location between 7467102 and 7468870
Coverage of 35.16 %
Instances:
QFPFIYHLRKDD | QFPFVYHLRNDG | QFPFVYHLRGKE | QFPFVYHLRNDD | QFPFVYHLRKEE
QFPFVYHLRKKE | QFPFVYHLRNDD | QFPFVYHLRKEE | QFPFVYHLRKDD | QFPFVYHLRKEE
QFPFVYNLRKDD | QFPFVYHLRKEE | QFPFVYHLRKDD | QFPFVYHLRKDD | QFPFVYHLKKDD
QFPFVYHLKKDD |
pattern: QFPF[VI]Y[NH]L[KR][NGK][EKD][EGD]
MKSFLFFFALFCILLLAKPIAARKDPGGQSTDETKEQSLVEAINPTKQESFVKDFDPNRPQFP
FIYHLRKDDHSQEQAENEKSFIKDFKPNRPQFPFVYHLRNDGLSQEQAENDKSFVKDFDPNRHQ
FPFVYHLRGKEVANDKSFVKDFDPNRPQFPFVYHLRNDDLSQEQVENDKSFVKDFDPNHPQFPF
VYHLRKEEAANDKSFVKDFDPNRPQFPFVYHLRKKEVANDKSFVKDFAPNRPQFPFVYHLRNDD
LSQEQAENDKSFVKDFDPNRPQFPFVYHLRKEEAANDKSFVKDFDPNRPQFPFVYHLRKDDLYQ
EQAENDKSFVKDFDPNRPQFPFVYHLRKEEVANDKSFVKDFDPNHPQFPFVYNLRKDDLSQEQA
ENEKSFVKDFDPNRPQFPFVYHLRKEEAVNDKSFVKYFDPNRPQFPFVYHLRKDDHSQEKAGNG
KSFVKDFDPNRPQFPFVYHLRKDDHSQEQAANDRSFVKDFDPNRPQFPFVYHLKKDDHSQEQVE
DDKSFVKYFDLNRPQFPFVYHLKKDDCLKNKRFDV
Repeat found in V6N13_080627
Repeat occurs 12 times in a sequence of 464 amino acids
Location between 7646177 and 7647647
Coverage of 38.79 %
Instances:
DFDPNRPQFPLMYYT | DFDPNRPQFSLMYYS | DFDPNRPQFPLMYYS | DFDPNRPQFPLMYYS | DFDPNRPQFPLMYYS
DFDPNRPQFPLMYYS | DFDPNRPQFPLMYYS | DFDPNRPQFPLMYYS | DFDPNRPQFPLMYYS | DFDPNHPQFPLMYYS
DFDPNRPQFPLMYYS | DFDLNRPQFPLMYYS |
pattern: DFD[LP]N[RH]PQF[SP]LMYY[ST]
MRSFLPFFAVFCILLSAETIAARKAPDRQWTVETEEQHMAEAIKPTEHQSFVKDFDPNRPQFP
LMYYTKKDTQSHQPTETDKSFVKDFDPNRPQFSLMYYSKKDGNTHEPTKTDKSFVKDFDPNRPQ
FPLMYYSKKDGQSHESAESDKSFTNDFDPNRPQFPLMYYSKKDSQSMELDEKDKFFVKDFDPNR
PQFPLMYYSKKDIQSQEPTENDKSFVKDFDPNRPQFPLMYYSKKDIQSQEPAENDKSFVKDFDP
NRPQFPLMYYSKKDGQSHESTETGDESFIKDFDPNRPQFPLMYYSKKDSQSQELDEKDKSFVKD
FDPNRPQFPLMYYSKKDIQSQEPAENDKSFVKDFDPNHPQFPLMYYSKKDGESHESTETDKSFI
KDFDPNRPQFPLMYYSKKDGQSQAAESDKSFVKDFDLNRPQFPLMYYSKKDGQSQEATEEGKYS
ESKLSEVEKALVKVVNI
The following known motifs were found in CDS V6N13_080633
Location between 7740453 and 7740960
FEPR was found 2 times in this sequence
Sequence:
MQLADTIAAARKDAGEYWRAVMKDQPMPEALQGLVRVEAASVGSGELKEELIIIEDFERPMRP
KEDEKKSTFADDIEPRPNISAYGDDADLKGKKPSSFAEDFEPRPNISAYGDDTDLKGKKSPSFA
EDFEPRPNISAYREDGDGLKGEKKPFASDFEQEPNISVYHG
Repeat found in V6N13_080636
Repeat occurs 4 times in a sequence of 170 amino acids
Location between 7759789 and 7760302
Coverage of 18.82 %
Instances:
PNISAYGD | PNISAYSD | PNISAYGE | PNISVYHG |
pattern: PNIS[AV]Y[GSH][EGD]
The following known motifs were found:
FEPR was found 2 times in this sequence
MWMQLADTIAAARKDAGEYWRAVMKDQPMPEALQGLVRVEAASVGSGELKEELIIIEDFERPM
RPKEDEKKSTFADDIEPRPNISAYGDDADLKGKKPSSFAENFEPRPNISAYSDDADLKGKKSSS
FAEDFEPRPNISAYGEDGDGLKGEKKPFASDFEQEPNISVYHG
Repeat found in V6N13_080637
Repeat occurs 4 times in a sequence of 174 amino acids
Location between 7771002 and 7771527
Coverage of 29.89 %
Instances:
DFEPRPNVSAYGD | DFEPRPNVSAYGD | DFEPRPNVSAYGD | DFEQEPNVSVYHD |
pattern: DFE[QP][ER]PNVS[AV]Y[GH]D
The following known motifs were found:
VS[AI]Y was found 3 times in this sequence
FEPR was found 3 times in this sequence
MQLADTIAAARKDAGEYWRTVMKDQPMPEALRGLVRVEAASTGSDGKAHCDTPAGFELKEEKI
IVEDFGHRGTEKKSAFADDFEPRPNVSAYGDPNVSAYGDDENLKVKKPSSFAEDFEPRPNVSAY
GDPNVSAYGDDADLKGKKSSSFAKDFEPRPNVSAYGDPNVSAYGDDGNLKGKAKSFTGDFEQEP
NVSVYHD

Similar gene clusters

JBBPBL010000061 - Cluster 142 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000061 - Gene Cluster 142. Type = cyclopeptide. Location: 7475796 - 7981012 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_080627
Repeat occurs 12 times in a sequence of 464 amino acids
Location between 7646177 and 7647647
Coverage of 38.79 %
Instances:
DFDPNRPQFPLMYYT | DFDPNRPQFSLMYYS | DFDPNRPQFPLMYYS | DFDPNRPQFPLMYYS | DFDPNRPQFPLMYYS
DFDPNRPQFPLMYYS | DFDPNRPQFPLMYYS | DFDPNRPQFPLMYYS | DFDPNRPQFPLMYYS | DFDPNHPQFPLMYYS
DFDPNRPQFPLMYYS | DFDLNRPQFPLMYYS |
pattern: DFD[LP]N[RH]PQF[SP]LMYY[ST]
MRSFLPFFAVFCILLSAETIAARKAPDRQWTVETEEQHMAEAIKPTEHQSFVKDFDPNRPQFP
LMYYTKKDTQSHQPTETDKSFVKDFDPNRPQFSLMYYSKKDGNTHEPTKTDKSFVKDFDPNRPQ
FPLMYYSKKDGQSHESAESDKSFTNDFDPNRPQFPLMYYSKKDSQSMELDEKDKFFVKDFDPNR
PQFPLMYYSKKDIQSQEPTENDKSFVKDFDPNRPQFPLMYYSKKDIQSQEPAENDKSFVKDFDP
NRPQFPLMYYSKKDGQSHESTETGDESFIKDFDPNRPQFPLMYYSKKDSQSQELDEKDKSFVKD
FDPNRPQFPLMYYSKKDIQSQEPAENDKSFVKDFDPNHPQFPLMYYSKKDGESHESTETDKSFI
KDFDPNRPQFPLMYYSKKDGQSQAAESDKSFVKDFDLNRPQFPLMYYSKKDGQSQEATEEGKYS
ESKLSEVEKALVKVVNI
The following known motifs were found in CDS V6N13_080633
Location between 7740453 and 7740960
FEPR was found 2 times in this sequence
Sequence:
MQLADTIAAARKDAGEYWRAVMKDQPMPEALQGLVRVEAASVGSGELKEELIIIEDFERPMRP
KEDEKKSTFADDIEPRPNISAYGDDADLKGKKPSSFAEDFEPRPNISAYGDDTDLKGKKSPSFA
EDFEPRPNISAYREDGDGLKGEKKPFASDFEQEPNISVYHG
Repeat found in V6N13_080636
Repeat occurs 4 times in a sequence of 170 amino acids
Location between 7759789 and 7760302
Coverage of 18.82 %
Instances:
PNISAYGD | PNISAYSD | PNISAYGE | PNISVYHG |
pattern: PNIS[AV]Y[GSH][EGD]
The following known motifs were found:
FEPR was found 2 times in this sequence
MWMQLADTIAAARKDAGEYWRAVMKDQPMPEALQGLVRVEAASVGSGELKEELIIIEDFERPM
RPKEDEKKSTFADDIEPRPNISAYGDDADLKGKKPSSFAENFEPRPNISAYSDDADLKGKKSSS
FAEDFEPRPNISAYGEDGDGLKGEKKPFASDFEQEPNISVYHG
Repeat found in V6N13_080637
Repeat occurs 4 times in a sequence of 174 amino acids
Location between 7771002 and 7771527
Coverage of 29.89 %
Instances:
DFEPRPNVSAYGD | DFEPRPNVSAYGD | DFEPRPNVSAYGD | DFEQEPNVSVYHD |
pattern: DFE[QP][ER]PNVS[AV]Y[GH]D
The following known motifs were found:
VS[AI]Y was found 3 times in this sequence
FEPR was found 3 times in this sequence
MQLADTIAAARKDAGEYWRTVMKDQPMPEALRGLVRVEAASTGSDGKAHCDTPAGFELKEEKI
IVEDFGHRGTEKKSAFADDFEPRPNVSAYGDPNVSAYGDDENLKVKKPSSFAEDFEPRPNVSAY
GDPNVSAYGDDADLKGKKSSSFAKDFEPRPNVSAYGDPNVSAYGDDGNLKGKAKSFTGDFEQEP
NVSVYHD

Similar gene clusters

JBBPBL010000061 - Cluster 143 - Lignan

Gene cluster description

Download cluster GenBank file
JBBPBL010000061 - Gene Cluster 143. Type = lignan. Location: 7977866 - 8118641 nt. Click on genes for more information.
Show pHMM detection rules used
plants/lignan: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Dirigent]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000063 - Cluster 144 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000063 - Gene Cluster 144. Type = cyclopeptide. Location: 851951 - 1703973 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_017057
Repeat occurs 4 times in a sequence of 810 amino acids
Location between 1328509 and 1330942
Coverage of 2.96 %
Instances:
KCGEIR | KCGDVR | KCGDME | KCGDIN |
pattern: KCG[ED][VMI][ENR]
METMKLFNHNSFHLQKDQPKLQLFSTVPHYYKNVSFLTKPSSRIYSNSQTQFTPLENPSQKPQ
NKGGFSSNKLIMEFTEHGLFEDAIRVYVRMLEDGLQVRDFNFFPRLIKSFAGLSDVKRSRQIHG
HVLKIGFLADIYVVNALLGMYFKCGEIRDAVQVFEKMSERDSVSWNSMISGFYQSEDYLGSLMI
FSLMVKEHGLFPNRVGCLSALSSCASIKSWILGRGIHGFVLKNGLESDEFLVSGLIEMYMKCGD
VRNAEHVFNSTVNKESVRMNTVIWNVMITGYVSNECLSKAHELFVEMLEFGIKPDSSTLVAALV
LCSELLDLNLGKQIHRLILASGFENDTRIQTALIEMYFKCCHPESGLKIFRRSRNDNLVMWGAV
ISNSAQDDQPFTALELFCNFMLKYGFPDSQMLLAVLRSCSSLALKSKGMEIHCLAVKTGSISDF
YVGSALVDMYGKCGDMESAQNIFSRLHCRDLVAWNALISGYSQNEWVDETLAAFCDMQREGIRP
NPVTIACILSICAHLSVRILCKEAHGFLTRQGWKSNVLVNNSLIAAYAKCGDINYSRIIFENMH
ERNQVSWNSIISALGMHGDVDKMFVYFEKMKQAGMKPDHVTFTSLLSACSHAGRVDMGCEYFQS
MVEEYKLQPQVEHYTCMVDLLGRAGYLSQAYDLIMDMPCEPDDRIWGSLLGSCRSHGDEKLAKV
VADHIFKLNATSIGYHVLLANIYEDLGKANEVAKVRSGIRDMGLRKQPGCSWIEIDNDIHIFVA
GDCTHHQSEDIYAVIESLTLEIKRAGYVPQLPLRSLMTDEAGF

Similar gene clusters

JBBPBL010000063 - Cluster 145 - Alkaloid

Gene cluster description

Download cluster GenBank file
JBBPBL010000063 - Gene Cluster 145. Type = alkaloid. Location: 4107360 - 4247465 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000063 - Cluster 146 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000063 - Gene Cluster 146. Type = cyclopeptide. Location: 6022372 - 6371822 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_017490
Repeat occurs 3 times in a sequence of 192 amino acids
Location between 6133626 and 6134205
Coverage of 9.38 %
Instances:
PGNGDP | PGNGYP | PGNDDP |
pattern: PGN[GD][DY]P
MSTQAEQQQQPVVVYPSSVTYQASPASRSDTSGGSFVAVFIVVAVIIAASAISCFLGRFCSRR
MGQRKPSKGNQMHTTLRTRDGDIEFGSDVRINPGGKQGDHGETNKGLDFKMPGNGDPREFRVSE
HGEPAEFRIPGNGYPELRIPETGDYVRFRMPGNDDPIGFRMAGHGDFNGETKPVDDGNGGLKAG
A

Similar gene clusters

JBBPBL010000063 - Cluster 147 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000063 - Gene Cluster 147. Type = cyclopeptide. Location: 10316137 - 10504884 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_018081
Repeat occurs 3 times in a sequence of 324 amino acids
Location between 10409914 and 10411106
Coverage of 7.41 %
Instances:
GSPERTRL | GSPERTRL | GSPLAKSM |
pattern: GSP[EL][AR][KT][SR][LM]
MRSKLLKMARFPQCLLFFCLLFLVCGHGIVAARDVKPAAVADPKDLDGKFTISDFHKTANIGS
PERTRLVHLDIGSPERTRLVHLVHKYSLRDHSHDNMENSKGGLFTVDELHNNFQAGKMLPIFFP
NKDPATSPFLPKKVADSIPFSSAKLPEILRLFSIAPGSPLAKSMEDTLSKCEYAPAKGETKTCA
TSLESMLDFFSSAFKVTPQDTKFITTTHPTMSTSSLQNYRVLDAPKEIKSSRKVACHPMPYPYA
VFFCHYDEDSSETRVFKVSMVGENTKDRVDAAAVCHMDSASAALLNLTDKQGKSPMCHFFSAGD
LIWVQ

Similar gene clusters

JBBPBL010000064 - Cluster 148 - Terpene

Gene cluster description

Download cluster GenBank file
JBBPBL010000064 - Gene Cluster 148. Type = terpene. Location: 4660085 - 4859457 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000064 - Cluster 149 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000064 - Gene Cluster 149. Type = saccharide. Location: 5493851 - 5691372 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000065 - Cluster 150 - Putative

Gene cluster description

Download cluster GenBank file
JBBPBL010000065 - Gene Cluster 150. Type = putative. Location: 7543433 - 7824818 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000066 - Cluster 151 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000066 - Gene Cluster 151. Type = cyclopeptide. Location: 6812236 - 8370391 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_101380
Repeat occurs 14 times in a sequence of 358 amino acids
Location between 7381139 and 7382216
Coverage of 58.66 %
Instances:
PNRPQYNYLSQEDMK | PNRPQYNYLSQEAMK | PNRPQYNYLSQEAMK | PNRPQYNYLSQEAMK | PNRPQYNYLSQEAMK
PNRPQYNYLSQESMK | PNRPQYNYLSQEAMK | PNRPQYNYLSQEAMK | PNRPQYNYLSQEAMK | PNRPQYNYLSQDAMK
PNRPQYNYLSQEAMK | PNRPQYNYLSQDAMK | PNRPQYNYLSQEAMK | PNRPQYNYLSQEAMN |
pattern: PNRPQYNYLSQ[ED][ASD]M[NK]
MKNAFLKDFDPNRPQYNYLSQEDMKKAFLKDFDPNRPQYNYLSQEAMKNAFLKDFNPNRPQYN
YLSQEAMKNAFLKDFDPNRPQYNYLSQEAMKNAFLKDFDPNRPQYNYLSQEAMKNAFLKDFDPN
RPQYNYLSQESMKNAFLKEFDPNRPQYNYLSQEAMKNTFLKDFDPNRPQYNYLSQEAMKNAFLK
DFDPNRPQYNYLSQEAMKNAFLKEFDPNRPQYNYLSQDAMKNAFLKDFDPNRPQYNYLSQEAMK
NAFLKEFDPNRPQYNYLSQDAMKNAFLKEFDPNRPQYNYLSQEAMKKTFMKEFDPNRPQYNYLS
QEAMNALKKDDQSHDSTKKDEQTQETKTSLVMDLAKAVL
Repeat found in V6N13_101388
Repeat occurs 12 times in a sequence of 468 amino acids
Location between 7715630 and 7717162
Coverage of 38.46 %
Instances:
VETEEQPMAEAIKPT | VETDKSFVKDFDPNR | VETDKSFVKDFDPNR | VETDKSFVKDFDPNR | VETDKSFVKDFDPNR
VETDKSFVKDFHPNR | VETDKSFVKDFDPNR | VETDKSFVKDFDPNR | VETDKSFVKDFDPNR | VETDKSFVKDFDPNR
VETDKSFAQDFDPNR | VETKKSFVKDFDPNR |
pattern: VET[EKD][EK][QS][FP][AVM][AQK][ED][AF][HDI][KP][NP][RT]
MTSFLSLFAVSCILLSAVTIAARKAPDRQWTVETEEQPMAEAIKPTPQDSFVKDFDPNRPQFP
LVYYSKKDYQTQEPVETDKSFVKDFDPNRPQFPLVYYSKKDGQSQEPVETDKSFVKDFDPNRPQ
FPLVYYSKKDGHSQEPVETDKSFVKDFDPNRPQFPLVYYSRKDGQSQEPVETDKSFVKDFDPNR
PQFPLVYYSKKDGQSQEPVETDKSFVKDFHPNRPQFPLVYYSKKDGQSQEPVETDKSFVKDFDP
NRPQFPLVYYSKKDGQSQEPVETDKSFVKDFDPNRPQFPLVYYSKKDGQSQEPVETDKSFVKDF
DPNRSQFPLVYYSKKDGQSQEPVETDKSFVKDFDPNRPQFPLVYYSKKDGQSQELVETDKSFAQ
DFDPNRPQFPLVYYSKKDGQSQEPVETKKSFVKDFDPNRPQFPLVYYSKKDDQSQEPTENDKSI
VNDKESKLSEAEKAFVKVVDI
Repeat found in V6N13_101396
Repeat occurs 7 times in a sequence of 288 amino acids
Location between 7821933 and 7823068
Coverage of 17.01 %
Instances:
FVKDFDP | FVKDFDP | FVKDFDP | FVKDFDP | FVKDFDP
FVKDFDP | FVKVVDI |
pattern: FVK[VD][VF]D[IP]
MTSFLSLFAVSCILLSAVTIAARKAPDRQWTVETEEQPMAEAIKPTPQDSFVKDFDPNRPQFP
LVYYSKKDYQTQEPAETDKSFVKDFDPNRPQFPLVYYSKKDGQSHEPVETDKSFVKDFDPNRPQ
FPLVYYSKKDGQSQEPVETDKSFVKDFDPNRPQFPLVYYSKKDGQSQEPVETDKSFVKDFDPNR
PQFPLVYYSKKDGFRPQPSSISSSILLEKDGQSQEPVETEKSFVKDFDPNRPQFPLVYYSKKDD
QSQEPTENDKSIVNDKESKLSEAEKAFVKVVDI
Repeat found in V6N13_101404
Repeat occurs 12 times in a sequence of 468 amino acids
Location between 7930634 and 7932166
Coverage of 38.46 %
Instances:
VETEEQPMAEAIKPT | VETDKSFVKDFDPNR | VETDKSFVKDFDPSR | VETDKSFVKDFDPNR | VETDKSFVKDFDPNR
VETDKSFVKDFDPNR | VETDKSFVKDFDPNH | VETDKSFVKDFDPNR | VETDKSFVKDFDPNR | VETDKSFVKDFDPNR
VETDKSFAQDFDPNR | VETEKSFVKDFDPNR |
pattern: VET[ED][EK][QS][FP][AVM][AQK][ED][AF][DI][KP][NSP][RTH]
MTSFLCLFAVSCILLSAVTIAARKAPDRQWTVETEEQPMAEAIKPTPQDSFVKDFDPNRPQFP
LVYYSKKDYQSQEPVETDKSFVKDFDPNRPQFPLVYYSKKDGQSQEPVETDKSFVKDFDPSRPQ
FPLVYYSKKDGHSQEPVETDKSFVKDFDPNRPQFPLVYYSRKDGQSQEPVETDKSFVKDFDPNR
PQFPLVYYSKKDGQSQESVETDKSFVKDFDPNRPQFPLVYYSKKDGQSQEPVETDKSFVKDFDP
NHPQFPLVYYSKKDGQSQEPVETDKSFVKDFDPNRPQFPLVYYSKKDGQSQEPVETDKSFVKDF
DPNRPQFPLVYYSKKDGQSQEPVETDKSFVKDFDPNRPQFPLVYYSKKDGQSQELVETDKSFAQ
DFDPNRPQFPLVYYSKKDGQSQEPVETEKSFVKDFDPNRPQFPLVYYSKKDDQSQEPTENDKSI
VNDKESKLSEAEKAFVKVVDI
Repeat found in V6N13_101409
Repeat occurs 10 times in a sequence of 324 amino acids
Location between 8017049 and 8018228
Coverage of 46.3 %
Instances:
SQEPVETDKSFVKDF | SQEPVETDKSFVKDF | SQEPVETDKSFVKDF | SQEPVETDKSFVKDF | SQEPVETDKSFVKDF
SQEPVETDKSFVKDF | SQELVETDKSFVKDF | SQELVETDKSFAQDF | SQEPVETEKSFVKDF | SQEPTENDKSIVNDK

pattern: SQE[LP][VT]E[NT][ED]KS[FI][AV][QKN]D[KF]
MSQEPVETDKSFVKDFDPNRPQFPLVYYSKKDGHSQEPVETDKSFVKDFDPKRPQFPLVYYSK
KDGQSQEPVETDKSFVKDFDPKCPQFPLVYYSKQDGQSQEPVETDKSFVKDFDPNRPQFPLVYY
SRKDGQSQEPVETDKSFVKDFDPNRPQFPLVYYSKKDGQSQEPVETDKSFVKDFDPNRPQFPLY
YSKKDGQSQELVETDKSFVKDFDPNCPQFPLVYYSKKDGQSQELVETDKSFAQDFDPNRPQFPL
VYYSKKDGQSQEPVETEKSFVKDFDPNRPQFPLVYYLKKDDQSQEPTENDKSIVNDKESKLSEA
GKSFC
Repeat found in V6N13_101413
Repeat occurs 11 times in a sequence of 435 amino acids
Location between 8072438 and 8073871
Coverage of 17.7 %
Instances:
FVKDFDP | FVKDFDP | FVKDFDP | FVKDFDP | FVKDFDP
FVKDFDP | FVKDFDP | FVKDFDP | FVKDFDP | FVKNFNP
FVKVVDI |
pattern: FVK[NVD][VF][ND][IP]
MTSFLSLFAVSCILLSAVTIAARKAPDRQWTVETEEQPMAEAIKPTPQDSFVKDFDPNRPQFP
LVYYSKKDYQTQEPAETDKSFVKDFDPNRPQFPLVYYSKKDGQSQEPVETDKSFVKDFDPNRPQ
FPLVYYSKKDGQSQEPVETDKSFVKDFDPNRPQFPLVYYSKKDGQSQEPVETDKSFVKDFDPNR
PQFPLVYYSKKDGQSQEPVETDKSFVKDFDPNRPQFPLVYYSKKDGQSQEPVETDKSFVKDFDP
NRPQFPLVYYSKKDGQSQELVETDKSFAQDFDPNRPQFPLVYYSKKDGQSQEPVETEKSFVKDF
DPNRPQFPLIYYSKKDGQSQELVETDKSFVKDFDPNRPQFPLVYYSKKDGQSQESAETDKPFVK
NFNPNRPQFPLVYYSKKDDQSQEPTENDKSIVNDKESKLSEAEKAFVKVVDI
Repeat found in V6N13_101416
Repeat occurs 11 times in a sequence of 435 amino acids
Location between 8203662 and 8205095
Coverage of 17.7 %
Instances:
FVKDFDP | FVKDFDP | FVKDFDP | FVKDFDP | FVKDFDP
FVKDFDP | FVKDFDP | FVKDFDP | FVKDFDP | FVKNFNP
FVKVVDI |
pattern: FVK[NVD][VF][ND][IP]
MTSFLSLFAVSCILLSAVTIAARTAPDRQWTVETEEQPMAEAIKPTPQDSFVKDFDPNRPQFP
LVYYSKKDYQTQEPAETDKSFVKDFDPNRPQFPLVYYSKKDGQSQEPVETDKSFVKDFDPNLPQ
FPLVYYSKKDGQSQEPLETDKSFVKDFDPNRPQFPLVYYSKKDGQSQEPVETDKSFVKDFDPNR
PQFPLVYYSKKDGQSQEPVETDKSFVKDFDPNRPQFPLVYYSKKDGQSQEPVETDKSFVKDFDP
NRPQFPLVYYSKKDGQSQEPVETDKSFAQDFDPNRPQFPLVYYSKKDGQSQEPVETEKSFVKDF
DPNRPQFPLVYYSKKDGQSQELVESDKSFVKDFDPNRPQFPLVYYSKKDGQSQESAETDKPFVK
NFNPNRPQFPLVYYSKKDDQSQESTENDKSIVNDKESKLFEAEKAFVKVVDI
Repeat found in V6N13_101418
Repeat occurs 15 times in a sequence of 567 amino acids
Location between 8279076 and 8280905
Coverage of 18.52 %
Instances:
FVKDFEP | FVKDFDP | FVKDFDP | FVKDFDP | FVKDFDP
FVKDFDP | FVKDFDP | FVKDFDP | FVKDFDP | FVKDFDP
FVKDFDP | FVKDFDP | FVKDFDP | FVKNFDP | FVKVVDI

pattern: FVK[NVD][VF][ED][IP]
MTSFLSLFAVSCILLSAVTIAARKAPDRQWTVETEEQPMAEAIKPTPQDSFVKDFEPNRPQFP
LVYYSKKDYQTQEPAETDKSFVKDFDPNRPQFPLVYYSKKDGQSQEPVETDKTFVKDFDPNRPQ
FPLVYYSKKDGQSQEPLETDKSFVKDFDPNRPQFPLVYYSKKDGQSQEPVETDKSFVKDFDPNR
PQFPLVYYSKKDGQSQEPVESDKSFVKDFDPNCPQFPLVYYSKKDGQSQEPVETDKSFVKDFDP
NRPQFPLVYYSKKDGQSQEPVETDKSFVKDFDPNRPQFPLVYYSKKDGQSQEPVETDKSFVKDF
DPNRPQFPLVYYSKKDGQSQEPVETDKSFVKDFDPYRPQFPLVYYSKKDGQSPEHVETDKSFVK
DFDPNRPQFPLVYYSKKDGQSQEPVETDKSFVQDFDPNRPQFPLVYYSKKDGQSQEPVETDKSF
VKDFDPNRPQFPLVYYSKKDGQSQELVETDKSFVKDFDPNRPQFPLVYYSKKDGQSQELVETDK
PFVKNFDPNRPQFPLVYYSKKDDQSQESVETDKSIVNDKESKLSEAGKAFVKVVDI
Repeat found in V6N13_101421
Repeat occurs 15 times in a sequence of 567 amino acids
Location between 8349055 and 8350884
Coverage of 18.52 %
Instances:
FVKDFDP | FVKDFDP | FVKDFDP | FVKDFDP | FVKDFDP
FVKDFDP | FVKDFDP | FVKDFDP | FVKDFDP | FVKDFDP
FVKDFDP | FVKDFDP | FVKDFDP | FVKDFDP | FVKVVDI

pattern: FVK[VD][VF]D[IP]
MTSFLSLFAVSCILLSAVTIAARTAPDRQWTVETEEQPMAEAIKPTPQDSFVKDFDPNRPQFP
LVYYSKKDYQTQEPAETDKSFVKDFDPNRPQFPLVYYSKKDGQSQEPVETDKSFVKDFDPNRPQ
FPLVYYSKKDGQSQEPLETDKSFVKDFDPNRPQFPLVYYSKKDGQSQEPVETDKSFVKDFDPNR
PQFPLVYYSKKDGQSQEPVETDKSFVKDFDPNRPQFPLVYYSKKDGQSQEPVETDKSFVKDFDP
NRPQFPLVYYSKKDGQSQEPVETDKSFVKDFDPNRPQFPLVYYSKKDGQSQEPVETDKSFVKDF
DPNRPQFPLVYYSKKDGQSQEPVETDKSFVKDFDPNRPQFPLVYYSKKDGQSPEPVETDKSFVK
DFDPNRPQFPLVYYSKKDGQSQEPVETDKSFVQDFDPNRPQFPLVYYSKKDGQSQEPVETDKSF
VKDFDPNRPQFPLVYYSKKDGQSQELVETDKSFVKDFDPNRPQFPLVYYSKKDGQSQELVETDK
PFVKDFDPNHPQFPLVYYSKKDDQSQESVETDKSIVNDKESKLSEAEKAFVKVVDI

Similar gene clusters

JBBPBL010000066 - Cluster 152 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000066 - Gene Cluster 152. Type = cyclopeptide. Location: 6937597 - 7723915 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_101380
Repeat occurs 14 times in a sequence of 358 amino acids
Location between 7381139 and 7382216
Coverage of 58.66 %
Instances:
PNRPQYNYLSQEDMK | PNRPQYNYLSQEAMK | PNRPQYNYLSQEAMK | PNRPQYNYLSQEAMK | PNRPQYNYLSQEAMK
PNRPQYNYLSQESMK | PNRPQYNYLSQEAMK | PNRPQYNYLSQEAMK | PNRPQYNYLSQEAMK | PNRPQYNYLSQDAMK
PNRPQYNYLSQEAMK | PNRPQYNYLSQDAMK | PNRPQYNYLSQEAMK | PNRPQYNYLSQEAMN |
pattern: PNRPQYNYLSQ[ED][ASD]M[NK]
MKNAFLKDFDPNRPQYNYLSQEDMKKAFLKDFDPNRPQYNYLSQEAMKNAFLKDFNPNRPQYN
YLSQEAMKNAFLKDFDPNRPQYNYLSQEAMKNAFLKDFDPNRPQYNYLSQEAMKNAFLKDFDPN
RPQYNYLSQESMKNAFLKEFDPNRPQYNYLSQEAMKNTFLKDFDPNRPQYNYLSQEAMKNAFLK
DFDPNRPQYNYLSQEAMKNAFLKEFDPNRPQYNYLSQDAMKNAFLKDFDPNRPQYNYLSQEAMK
NAFLKEFDPNRPQYNYLSQDAMKNAFLKEFDPNRPQYNYLSQEAMKKTFMKEFDPNRPQYNYLS
QEAMNALKKDDQSHDSTKKDEQTQETKTSLVMDLAKAVL
Repeat found in V6N13_101388
Repeat occurs 12 times in a sequence of 468 amino acids
Location between 7715630 and 7717162
Coverage of 38.46 %
Instances:
VETEEQPMAEAIKPT | VETDKSFVKDFDPNR | VETDKSFVKDFDPNR | VETDKSFVKDFDPNR | VETDKSFVKDFDPNR
VETDKSFVKDFHPNR | VETDKSFVKDFDPNR | VETDKSFVKDFDPNR | VETDKSFVKDFDPNR | VETDKSFVKDFDPNR
VETDKSFAQDFDPNR | VETKKSFVKDFDPNR |
pattern: VET[EKD][EK][QS][FP][AVM][AQK][ED][AF][HDI][KP][NP][RT]
MTSFLSLFAVSCILLSAVTIAARKAPDRQWTVETEEQPMAEAIKPTPQDSFVKDFDPNRPQFP
LVYYSKKDYQTQEPVETDKSFVKDFDPNRPQFPLVYYSKKDGQSQEPVETDKSFVKDFDPNRPQ
FPLVYYSKKDGHSQEPVETDKSFVKDFDPNRPQFPLVYYSRKDGQSQEPVETDKSFVKDFDPNR
PQFPLVYYSKKDGQSQEPVETDKSFVKDFHPNRPQFPLVYYSKKDGQSQEPVETDKSFVKDFDP
NRPQFPLVYYSKKDGQSQEPVETDKSFVKDFDPNRPQFPLVYYSKKDGQSQEPVETDKSFVKDF
DPNRSQFPLVYYSKKDGQSQEPVETDKSFVKDFDPNRPQFPLVYYSKKDGQSQELVETDKSFAQ
DFDPNRPQFPLVYYSKKDGQSQEPVETKKSFVKDFDPNRPQFPLVYYSKKDDQSQEPTENDKSI
VNDKESKLSEAEKAFVKVVDI

Similar gene clusters

JBBPBL010000066 - Cluster 153 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000066 - Gene Cluster 153. Type = cyclopeptide. Location: 8291182 - 9169391 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_101421
Repeat occurs 15 times in a sequence of 567 amino acids
Location between 8349055 and 8350884
Coverage of 18.52 %
Instances:
FVKDFDP | FVKDFDP | FVKDFDP | FVKDFDP | FVKDFDP
FVKDFDP | FVKDFDP | FVKDFDP | FVKDFDP | FVKDFDP
FVKDFDP | FVKDFDP | FVKDFDP | FVKDFDP | FVKVVDI

pattern: FVK[VD][VF]D[IP]
MTSFLSLFAVSCILLSAVTIAARTAPDRQWTVETEEQPMAEAIKPTPQDSFVKDFDPNRPQFP
LVYYSKKDYQTQEPAETDKSFVKDFDPNRPQFPLVYYSKKDGQSQEPVETDKSFVKDFDPNRPQ
FPLVYYSKKDGQSQEPLETDKSFVKDFDPNRPQFPLVYYSKKDGQSQEPVETDKSFVKDFDPNR
PQFPLVYYSKKDGQSQEPVETDKSFVKDFDPNRPQFPLVYYSKKDGQSQEPVETDKSFVKDFDP
NRPQFPLVYYSKKDGQSQEPVETDKSFVKDFDPNRPQFPLVYYSKKDGQSQEPVETDKSFVKDF
DPNRPQFPLVYYSKKDGQSQEPVETDKSFVKDFDPNRPQFPLVYYSKKDGQSPEPVETDKSFVK
DFDPNRPQFPLVYYSKKDGQSQEPVETDKSFVQDFDPNRPQFPLVYYSKKDGQSQEPVETDKSF
VKDFDPNRPQFPLVYYSKKDGQSQELVETDKSFVKDFDPNRPQFPLVYYSKKDGQSQELVETDK
PFVKDFDPNHPQFPLVYYSKKDDQSQESVETDKSIVNDKESKLSEAEKAFVKVVDI
Repeat found in V6N13_101443
Repeat occurs 13 times in a sequence of 377 amino acids
Location between 8759337 and 8760582
Coverage of 20.69 %
Instances:
SITGYD | SITSYG | SITAYG | SITSYG | SITAYG
SITSYG | SITANG | SITSYG | SITAYG | SITSYG
SITAYG | SITSYG | SITAYG |
pattern: SIT[AGS][NY][GD]
The following known motifs were found:
FEPR was found 11 times in this sequence
MKIFLSFFAILSLLLFAVDTIAAARKDAGEYWRAVMKDQPMPEALQGLVRLEAASASSSVTSY
SGDDAGLKGEQKPFTSDFEPRPSITGYDGHNAGHKGEKKPFTNDFEPRPSITSYGKKSLTSDFG
PRPSITAYGGDDTGLVGEKKPFTADFEPRRSITSYGKKSLTSDFEPRPSITAYGSDDAGLEGEK
KPFTADFEPRPSITSYGKKSLTSDFGPRPSITANGGDDTGLEGKKKPFTADFEPRPSITSYGKK
SLTSDFEPRPSITAYGGHDSGLVGEKKPFTADFEPRPSITSYGKKSLTSDFEPRPSITAYGGDD
TGLEGEKKPFTADFEPRPSITSYGKKSLTSNFEPRPSITAYGSDDAGLQGVKKLVNVF
The following known motifs were found in CDS V6N13_101446
Location between 8797466 and 8798087
FEPR was found 2 times in this sequence
Sequence:
MKSFLPFFAFLSLLLLAGTIAAARKDAGEYWRAVMKDQPMPEALQGLVRVEAASIGSGELKEE
LIIIEDFERPMRPKEDEKKSTFADDIEPRPNISAYGDDADLKGKKPSSFAEDFEPRPNISTYGD
DANLKGKKSPSFAEDFEPRPNISAYGGDGDGLKGEKKAFSSEFEQEPNISVYHG
Repeat found in V6N13_101447
Repeat occurs 4 times in a sequence of 181 amino acids
Location between 8806686 and 8807307
Coverage of 17.68 %
Instances:
PNISAYGD | PNISAYGN | PNISAYGG | PNISVYHG |
pattern: PNIS[AV]Y[GH][NGD]
MKSFLPFFAFLSLLLLADTIAAARKDAGEYWRAVMKDQPMPEALQGLVRLEAASAGSGELKEE
LIIIEDFERPMRPKEDEKKSTFADDIEPRPNISAYGDDADLKGKKPSSFGEDFEPRPNISAYGN
DADLKGKKSPSFAEDFESRPNISAYGGDGDGLKGEKKAFASEFEQEPNISVYHG
Repeat found in V6N13_101450
Repeat occurs 4 times in a sequence of 174 amino acids
Location between 8841219 and 8841744
Coverage of 34.48 %
Instances:
EDFGLGGTEKKSALA | EDFEPRPNVSAYGDD | EDFEPRPNVSAYGDD | EDFEPRPNVSAYGND |
pattern: EDF[EG][LP][GR][GP][NT][EV][SK][AK][SY][AG][LND][AD]
The following known motifs were found:
VS[AI]Y was found 3 times in this sequence
FEPR was found 3 times in this sequence
MQLADTIAAARKDAGEYWRAVMKDQPMPEALRGLVRVEAASVGTDGKTHCDTPAGFELKEEKI
IVEDFGLGGTEKKSALAEDFEPRPNVSAYGDDPNVSAYGDDENLKAKKPSSFAEDFEPRPNVSA
YGDDPNVSAYGDDTNLKGKKSSSFAEDFEPRPNVSAYGNDPNVSAYGNDGDLKGKEKSFTGDFE
QEPNVSVYHD

Similar gene clusters

JBBPBL010000068 - Cluster 154 - Fatty_acid

Gene cluster description

Download cluster GenBank file
JBBPBL010000068 - Gene Cluster 154. Type = fatty_acid. Location: 2439612 - 2528780 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000069 - Cluster 155 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000069 - Gene Cluster 155. Type = saccharide. Location: 710796 - 752735 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000069 - Cluster 156 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000069 - Gene Cluster 156. Type = saccharide. Location: 2671271 - 2729281 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000069 - Cluster 157 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000069 - Gene Cluster 157. Type = cyclopeptide. Location: 3430060 - 3740368 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Similar gene clusters

JBBPBL010000069 - Cluster 158 - Putative

Gene cluster description

Download cluster GenBank file
JBBPBL010000069 - Gene Cluster 158. Type = putative. Location: 3737506 - 3834965 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000069 - Cluster 159 - Putative

Gene cluster description

Download cluster GenBank file
JBBPBL010000069 - Gene Cluster 159. Type = putative. Location: 3981265 - 4050057 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000069 - Cluster 160 - Putative

Gene cluster description

Download cluster GenBank file
JBBPBL010000069 - Gene Cluster 160. Type = putative. Location: 9453743 - 9593312 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000072 - Cluster 161 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000072 - Gene Cluster 161. Type = cyclopeptide. Location: 857323 - 1741658 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Similar gene clusters

JBBPBL010000075 - Cluster 162 - Terpene

Gene cluster description

Download cluster GenBank file
JBBPBL010000075 - Gene Cluster 162. Type = terpene. Location: 476630 - 585436 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000077 - Cluster 163 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000077 - Gene Cluster 163. Type = saccharide. Location: 4111886 - 4128565 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000079 - Cluster 164 - Alkaloid

Gene cluster description

Download cluster GenBank file
JBBPBL010000079 - Gene Cluster 164. Type = alkaloid. Location: 1540419 - 1714967 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000079 - Cluster 165 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000079 - Gene Cluster 165. Type = cyclopeptide. Location: 3244720 - 3507159 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_102362
Repeat occurs 3 times in a sequence of 192 amino acids
Location between 3320477 and 3321056
Coverage of 9.38 %
Instances:
PGNGDP | PGNGYP | PGNDDP |
pattern: PGN[GD][DY]P
MSTQAEQQQQPVVVYPSSVTYQTSPASHSDPSGGSFVAVFIVVAVIIAASAISCFLGRFCSRR
MGQRKPSKGNQRHTTLRTREGDIEFGSDVRINPGGKQGDHGETNKGLDFKMPGNGDPREFRVSE
HGEPAEFRIPGNGYPELRIPETGDYVRFRMPGNDDPIGFRMAGHGDFNGETKPVDDGNGALKAG
A

Similar gene clusters

JBBPBL010000079 - Cluster 166 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000079 - Gene Cluster 166. Type = saccharide. Location: 6036411 - 6065451 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000079 - Cluster 167 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000079 - Gene Cluster 167. Type = cyclopeptide. Location: 7082966 - 7317975 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_102928
Repeat occurs 6 times in a sequence of 525 amino acids
Location between 7089734 and 7093129
Coverage of 6.86 %
Instances:
FGSTVG | FGSNDR | FGSRDG | FGSNDG | FGSNDG
FGSGLP |
pattern: FGS[NGRT][LVD][GRP]
MGAEGDSSESRPGGNGGEEGVMVNIRCSNGKKFTVRTSFGSTVGSFKAVLAQNCGVPADQQRL
IYKGRILKDDQTLQSYGLQADHTVHMVRGFAPSSSTTPAATTNVATPNPMPRVPISFGPFGSND
RVELNFGSRDGAGLGELSFGSNDGAGLGELSFGSNDGAGLGASLFPGLNPLGGNGGFGLFGSGL
PEFEQVQQQLTQNPQVMREIMSTPAIQSLMNNPELMRTLIMSNPQMREIIDRNPELGHILNDPS
ILRQTLEAARNPELMREMMRNTDSAMSNIEASPEGFNMLRRMYENVQEPLINATTMAGTNVNSP
GSNPFAALLGNQGNSQARGSPNSTSTTGSETTQGQTSPNTNPLPNPWSNNAGGGAAQINIAAGS
NPAGDARTPGIGGPGGLGLPEMPHMLNGMPDASQLTQLLQNPAVSQVMRSVASNPQYMNQRQCR
DLAQAGATTGAPGTRSLELLMNMFGGLGAVPLEELYATQLSQLREMGFYDTEENIRALRATAGN
VHAAVERLLRNSGL

Similar gene clusters

JBBPBL010000080 - Cluster 168 - Fatty_acid

Gene cluster description

Download cluster GenBank file
JBBPBL010000080 - Gene Cluster 168. Type = fatty_acid. Location: 363949 - 543261 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000080 - Cluster 169 - Transporter_associated

Gene cluster description

Download cluster GenBank file
JBBPBL010000080 - Gene Cluster 169. Type = transporter_associated. Location: 847608 - 936900 nt. Click on genes for more information.
Show pHMM detection rules used
plants/transporter_associated: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[MatE/LTP_2/ABC2_membrane/ABC_tran]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000082 - Cluster 170 - Alkaloid

Gene cluster description

Download cluster GenBank file
JBBPBL010000082 - Gene Cluster 170. Type = alkaloid. Location: 5737097 - 5850446 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000083 - Cluster 171 - Terpene

Gene cluster description

Download cluster GenBank file
JBBPBL010000083 - Gene Cluster 171. Type = terpene. Location: 476576 - 541911 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000083 - Cluster 172 - Terpene-saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000083 - Gene Cluster 172. Type = terpene-saccharide. Location: 3783556 - 3887500 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000085 - Cluster 173 - Fatty_acid

Gene cluster description

Download cluster GenBank file
JBBPBL010000085 - Gene Cluster 173. Type = fatty_acid. Location: 3929600 - 4074009 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000085 - Cluster 174 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000085 - Gene Cluster 174. Type = saccharide. Location: 4149755 - 4293562 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000086 - Cluster 175 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000086 - Gene Cluster 175. Type = cyclopeptide. Location: 691803 - 1085847 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

The following known motifs were found in CDS V6N13_094942
Location between 1006349 and 1017997
.L.Y..Y was found 2 times in this sequence
Sequence:
MAPFRYRFPHLFVFIFCTAFVSASHSYLESDFSIIDSGSDGLLLYHDYSPPAPPPPPPHAPSV
SCTDDLGGVGSLDSTCQIVADLNLTSDVYIVGKGNFYILPGVRFHCPILGCSITVNISGNFSLG
ENSTVVSGSFQLAAYNASFFNGSAVNTTGWAGDPPPQTSGSPQGLDGAGGGHGGRGACCLVDDR
KMAGDIWGGDAYSWSSLQEPSSFGSKGGTTSKDVDYGGQGGGSVRVEIKELLEVNGSLLADGGD
GGTKGGGGSGGSIYIKSRKMIGSGRISACGGNGFGGGGGGRVSVDVFSRHDEPKIYVHGGVSHG
CPENAGAAGTLYDAVPRSLTVDNHNMSTDTDTLLLEFPYQPLWTNVYIKNCARASVPLLWSRVQ
VQGQISLLSRGMLSFGLAHYASSEFELLAEELLMSDSTIKVYGALRMTVKIFLMWNSKMLIDGG
EETTVATSWLESSNLVVLKESSIIQSNANLGVHGQGSLNLSGPGDTIQAQRLVLSLFYSIYVGP
GSVLRGPLETASSGDVTPKLYCGLQHCPIELLHPPEDCNVNSSLPFTLQICRVEDITIEGLMKG
SVVHFHWARSVSVQSSGVISASGMGCIGGIGRGNFLDNGIGSGGGHGGKGGFACYNGTCVEGGI
SYGNSELPCELGSGSGNESSANSTAGGGVIVMGSMEHPLPSLSVEGAVRADGESFGETDWHQGY
SVSNDSSIAPGGGSGGTVLLFLHTLTLGKSATLSSVGGYGTSKGSGGGGGGRIHFHWSDIPTGD
VYQPIASVKGSIYARGGLGRNESGGGDGTVTGKACPKGLYGTFCTECPVGTYKNVSGSDTSLCR
PCPASELPRRATYVAVRGGVAKTPCPYECVSDRYHMPHCFTSLEELIYTFGGPWLFGFLLVGLL
ILLALVLSVARMKFVGVEELPGPAPTQHGSQRDHSFPFLESLNEVLETNRVEESQSHVHRMYFM
GPNTFSEPWHLPHTPPEEIKEIVYEGAYNTFVDEINAIAAYQWWEGAIYTILSILAYPLALSWQ
QWRRRMRLQRLREFVRSEYDHACLRSCRSRALYEGIKVSATSDLMLAYVDFFLGGDEKRTDLPP
RLPQRFPMAIIFGGDGSYMAPFSLQIDNILTSLMSQLVAPTTWYRLVAGLNAQLRLVCRGRLRV
TFMPVIRWLETHANPALGIHGVHIDLAWFQAAPGGYRQYGLLVYSVEEENEPMSLGNTNGVKTE
PLFGVNTGYMSNQSGYTRENVLLTQGHQSSEGFSRRKRSYKGLIDANSLHKVEEKRDIFYLLSF
IVHNTKPVGHQDLVGLVISMLLLGDFSLMLLTFLQLYSISLVDVFLVLFILPLGLLLPFPAGIN
ALFSHGPRRSAGLARFYALWNLTSLINVGVAFLCGYIHYNRLLLSSKKTPSLQPWSFNMDESEW
WIFPAGLVLCKLLQSQLTNWHVANLEIKDRSLYSSDFEVFWQR

Similar gene clusters

JBBPBL010000086 - Cluster 176 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000086 - Gene Cluster 176. Type = saccharide. Location: 1499575 - 1591272 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000086 - Cluster 177 - Transporter_associated-terpene

Gene cluster description

Download cluster GenBank file
JBBPBL010000086 - Gene Cluster 177. Type = transporter_associated-terpene. Location: 4673367 - 4759487 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))
plants/transporter_associated: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[MatE/LTP_2/ABC2_membrane/ABC_tran]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

Similar known gene clusters

JBBPBL010000091 - Cluster 178 - Saccharide-polyketide

Gene cluster description

Download cluster GenBank file
JBBPBL010000091 - Gene Cluster 178. Type = saccharide-polyketide. Location: 1397600 - 1442925 nt. Click on genes for more information.
Show pHMM detection rules used
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000091 - Cluster 179 - Fatty_acid

Gene cluster description

Download cluster GenBank file
JBBPBL010000091 - Gene Cluster 179. Type = fatty_acid. Location: 5113429 - 5200027 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000091 - Cluster 180 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000091 - Gene Cluster 180. Type = cyclopeptide. Location: 5264467 - 5514087 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_063276
Repeat occurs 18 times in a sequence of 942 amino acids
Location between 5297918 and 5305600
Coverage of 28.66 %
Instances:
GGGQQYSGSPQIGGG | GGGQQNSGSPQMGGG | GGGQQYSSSPQMGGG | GGGQQYSGSLQMGGG | GGGHQYFDPPRTGGG
GGGQQYSSSPQTGGG | GGGQQYSSSPQTGGG | GGGQQYSGSPQMGGG | GGGHQYSGSPWTGGG | GGGQQYSGSPQTGGG
GGGQQYSGSPQTGGG | GGGQQYSGSPQTGGG | GGGQQYSGSPQMGGG | GGGHQYFDTPRTGGG | GGGQQYSGSPRTGGG
GGGQQYSGSPQMGGG | GGGQQYSGSPQTGGG | GGGQQYSGYSGSPQM |
pattern: GGG[QH]Q[NY][SF][GSD][SYTP][LSP][WQGR][SMTI][GP][GQ][GM]
MRRNLVWRRNESLAREVMAWENQVVLLGSKGLAQYDGVQMGNLAGAGRERGHGLHMSQMAEEA
AAERRRRKRRLRIEPPIHALRASAPSAPPTRDPNAPRLPDSTSALVGNRLNLHNRVQSLIRASD
LDAASLLARSSVFSSTRPTVFTCNAIIAAMYRNKRFNEAIALFHFFFKQSDIVPNVVSYNNLIN
THCDRGDVDIAIQVYREILEKAPFSPSAVTYRHLTKGLVDAGRIGEAVGLLREMLNKGHGADSL
VFNNLISGFLNLGNLDKANELFDELKERCLVYDGVVNATFMEWWFDQGKDKEAMDSYKSLLDRK
FKMPPPTCNTLLEVLLKHGKTKEAWALFENMLDNHTPPNTQAVNSDTFSIMVNEYFKLGNFEEA
IKIFKKVGTKPGSKPFAMDTAGYNNIISRLCEHGLLSEAEKFFEELCGKSLTPDVPMYRTMIDA
YLNAERVDDALRSFTKMVETGLRVVASFGTRVFSEFLKNGKNLEVAALLTKMGEKDPKPDASIY
DVVVRGLCNASELDKSLDILDQMLKYSIGVTPALQEFVRGAFGEVGRNEDIDRVLNENGWRFPG
RQPRPFVQSPRSLSGPAEMGGWQSSGSPQMGGGQQYSGSPQIGGGQQNSGSPQMGGGQQYSSSP
QMGGGQQYSGSLQMGGGHQYFDPPRTGGGQQYSSSPQTGGGQQYSSSPQTGGGQQYSGSPQMGG
GHQYSGSPWTGGGQQYSGSPQTGGGQQYSGSPQTGGGQQYSGSPQTGGGQQYSGSPQMGGGHQY
FDTPRTGGGQQYSGSPRTGGGQQYSGSPQMGGGQQYSGSPQTGGGQQYSGYSGSPQMGRGQQYS
GSPQMGGDPPVPSSPSEKSDVLNQPVMFIPPLLFQEYFNSLFSPECILFVDHCRKAGQQSKKQV
HLEPSSHHISIGNLTFFPTEKHHHNDPVMEHPDPDAHSQDKSTNNAL
Repeat found in V6N13_063278
Repeat occurs 12 times in a sequence of 1223 amino acids
Location between 5317884 and 5325792
Coverage of 14.72 %
Instances:
PGKGQDILKQKRRKK | PGKTMDGPSFFWNGG | PGKAMCENDVIADGE | PGKAMCEKEVIADGK | PGKAMCENDVIADGE
PGKAMFEKVVLGDGK | PGKAMCENDVIADGE | PGKAMFEKVVLADRK | PGKAMCENDVIADGE | PGKAMCEKEVIADVN
PGKAMCEKEVIADGN | PGKAMCEKDVTAGGE |
pattern: PGK[AGT][QM][CDF][EGI][LNKP][DEKSV][QVF][TLIKF][AWGR][NGRD][GKVR][EGKN]
MSSGEYRRSPRIIELDARKALARGQNKDNVICEVMDEEEPGKGQDILKQKRRKKKVKVRTVQD
LIVNSVEYKVQKTDTGNDQVGLVKNAAIVPSGAAMPEKGKLELLLGILQRKDTHKIFAEPVNAE
EVEYYYDVIKEPMDFGTVAKKLNEGSYPTLEEFEHDVSLVFDNAMLFNAANTIYYRQACALKEL
ATKLFLALKTDPGNFETEASVLTMGHGRRKKAGVGILNCKNKSNTSIAARGYRAPRQFNDVDVG
RCRTYRPWKSSLSENESVVSAVYNSPKQLQLLELDPFCPYNLCPYLKRNSHGGNHVIHFYMNGE
ADLGYLESLKRFSKDLGPVAQKVAMKKTERYISEAMRVWNMTTNRQAWAPNMQIPNALITSNIK
VAPSVKVPSSTPGCQNISGDKMNVHSGFSHGEQASIDGSMTINNALTGGISQPGGRVESLGNFQ
GKMIPSASRGFAPALRLLGDSSGYQAFPGKTMDGPSFFWNGGKVSAGYNVDINDALSRGKGKLG
DGVDFQEKLLQPMRVGLDSGVAFKDYAANQSNGVHLDSSYPNYESEKAKLDLSALSSTKGKQKE
LGETSLISNPMNVDNAGHSSSWSRMQECLPQSNTRVSSSSWHPPSVVMTGLNGFQTIDNMTGTG
SHYPGKAMCENDVIADGEGSRYRTNVEQGGVVSDLLKPVEMGMQSLSGVGSHYPGKAMCEKEVI
ADGKGSRYRSNVEEGGLFSDLLKPLETGMQFSTGTGSHYPGKAMCENDVIADGEGSRYRTNVEQ
GGLVSDLLKPVKMGMQSLSGVGSHYPGKAMFEKVVLGDGKGSRYRSNVEEGGLFSDLLKPLETG
MQFSTGTGSHYPGKAMCENDVIADGEGSRYRTNVEQGGVVSDLLKPVKMGMQSLSGVGSHYPGK
AMFEKVVLADRKGSRYRSNVEEGGVFSELLKPLEMGMQFSTGIGSRYPGKAMCENDVIADGEGS
RYKTNVDQGGVVSHLLKPVEVGMQSLSGVGSHYPGKAMCEKEVIADVNGSRYRTNVEEGGVFSD
LLKPLQMGTQFSTGIGSHYPGKAMCEKEVIADGNGYRYRTNVEEGGVFSDLLKPLQMGTQFSTG
IGSHYPGKAMCEKDVTAGGEGGVVSDLLKPPEMGMQAPSEFCFQEGILPAELTSLLKEKGELEP
LCTVPTDEDWCRFYLENEIRASEKDLEFERFQPESSGTAAERRQKQTVEGEEIHMVKNSDTPLH
QKADQQDV

Similar gene clusters

JBBPBL010000092 - Cluster 181 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000092 - Gene Cluster 181. Type = cyclopeptide. Location: 368849 - 555994 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_030970
Repeat occurs 3 times in a sequence of 339 amino acids
Location between 461786 and 463056
Coverage of 10.62 %
Instances:
EFGAFWDGDNLD | EFGAYGYDNSYT | EFGAYGYDDSYT |
pattern: EFGA[FY][WG][DY][GD][ND][NS][LY][TD]
MVNNLEFGAFWDGDNLDKESNTKNSSDNKGIDDSPDNKGINDPEFGAYGYDNSYTEPKIEDNS
EKKSNSRDFPENKGINDPEFGAYGYDDSYTISRTEDNSDRESNTEDSSVNKESNIKDSSTNTGV
NNPKTHTAPNKKGELTKTLTKESDSNILASANCRITGADVKRRLTGDIEELVVESRIKGRGLRG
SSGEKLRERRDERRGEVLCRIVRVLRQFGCFGDGKDIRLVWHELAEGTKNPMFTIGQGIREMGE
NNIVCHKMKYPYAVYLCHSIEKTEVYKVPLVSDDGTKVNAMAACHKDTSAWSPNHVAFKVLKVK
PGTVPICHFLGRDTLVWIPN
Repeat found in V6N13_030978
Repeat occurs 13 times in a sequence of 520 amino acids
Location between 530280 and 532552
Coverage of 37.5 %
Instances:
NQQPTLYPDFPDVPA | NQQPTLYPDFPDVPA | NQQPTLYPNFPDVPA | NQQPTLYPDFPDVHA | NQQPTLYPDFPDVPA
NQQPTLYPDFPDVPA | NQQPTLYPDFPDVPA | NQQPTLYPDFPDVPA | NQQPTLYPDFADVPA | NQQPTLYPDFADVPA
NQQPTLYLDFLDVPA | NQQPTLYPDFPDVPA | NQQPTLYPDFPDVPA |
pattern: NQQPTLY[LP][ND]F[ALP]DV[HP]A
MNQNQMPIQLITANQQPTLYPDFPDVPADLQLHPESEPILDLDKFFEESTANQQPTLYPDFPD
VPADLQLHPKSEPILDLEKFFEESTANQQPTLYPNFPDVPADLQLHPKSEPILDLEKFFEESTA
NQQPTLYPDFPDVHADLQLHPESEPILDLEKFFEESTANQQPTLYPDFPDVPADLQLHPESEPI
LNLDKFFEESTANQQPTLYPDFPDVPADLQLHPESEPILNLDKFFEESTANQQPTLYPDFPDVP
ADLQLHPESEPILDLYKFFEESTANQQPTLYPDFPDVPADLQLHPESEPILDLYKFFEESTANQ
QPTLYPDFADVPADLQLHPESEPILDLYKFFEESTANQQPTLYPDFADVPADLQLHPESEPILD
LDKFFEESTANQQPTLYLDFLDVPADLQLHPESEPILDLEKFFEESTANQQPTLYPDFPDVPAD
LQLHPQSEPILDLDKFFKKSTTNQQPTLYPDFPDVPADLSTSHKGSEFIGQKKKQDSEFASEFI
GSFASEAQT

Similar gene clusters

JBBPBL010000092 - Cluster 182 - Fatty_acid-lignan

Gene cluster description

Download cluster GenBank file
JBBPBL010000092 - Gene Cluster 182. Type = fatty_acid-lignan. Location: 690416 - 736780 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))
plants/lignan: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Dirigent]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000092 - Cluster 183 - Putative

Gene cluster description

Download cluster GenBank file
JBBPBL010000092 - Gene Cluster 183. Type = putative. Location: 3615933 - 3689472 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000092 - Cluster 184 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000092 - Gene Cluster 184. Type = saccharide. Location: 3998451 - 4101691 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000092 - Cluster 185 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000092 - Gene Cluster 185. Type = cyclopeptide. Location: 4034809 - 4311614 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_031603
Repeat occurs 3 times in a sequence of 175 amino acids
Location between 4097732 and 4098354
Coverage of 12.0 %
Instances:
KEVSADA | KEVSVDA | KEVSVLR |
pattern: KEVS[AV][LD][AR]
MGIWDFISGSTDSVKGLLLSSYNHGSAVVTKSKEVSADALQKVNHHGSVAITKGKEVSVDALQ
KVNHHMSDPETRSKISRVATEVAKNATIEGLKSIPGAYPTYKIVSKSVSDDDKKLKSENKSEKQ
KEELKTLQAAVSKLEKEVSVLREQVEASVKPEGKIQVHSMKKFILSHF
Repeat found in V6N13_031606
Repeat occurs 6 times in a sequence of 1194 amino acids
Location between 4109881 and 4128814
Coverage of 3.52 %
Instances:
KEQENAT | KEQQNAT | KEQENAT | KEQQNAT | KEQEKKK
KEQDKTR |
pattern: KEQ[EQD][NK][AKT][KTR]
MFSFARSSLEEMLDSLRQRDDGEKPKDMPPALPCRPPSRARIISGRWAAQPTFNADGENCGVE
DKVKKNTLWRNKRRKDVNVDSPYNLGEEKRVLEGSDNIVHFIQNKLRVWCRQSRGVWASGTIEA
TSGEESFVSLGNENVVKVSTSYLFPANPEILDGVDDLMLLSYLNEPSVLHNLKCRYSCDMIYSK
AGAMLVAVNPFKDVEIYGRDFVAAYKQKATDSPHVFAVADTAYNEMMNDGVSQSLIISGEYGAG
KTETAKFAMKYLAAVGGGNVEIEGQLLLASCILEAFGNAKTSRNDNASRFVSSFPYLFEDCSPP
KGEFVEIHFTEVGEISGVKIQTFLLEKSRVVELDPAERSYHIFYQLCAGAPQTLRERLYLKKAD
EYNYLSQSNCLVINDVDDAQEFHKLMEALDNVRISKEEKDQVLKMLAAVLWLGNISFQVIDNEN
HVGASIDEALINAARLLGCASNDLNQALCAHTTDADKGSDKGSIVQKFTLQQASDARDALAKWI
YACLFDWLVEKINKLIDVGKQHDGRSISILDIYGFESFKKNSFEQLCINYANERLQQHFNWHLL
KLEQQEYELDGIDGVKVDFVDNQECLDLFEKKPNGLFSLLDEESKSPDANDSTLVTKLKQHLSG
NPCFKGDKGRAFAVRHFAGEVLYDTNGFLKKNLDTLNTELIELLSSCEGQFPQTFAIKMLNQSL
NPDAPKQGVGIQLKGQLFKLMHQLENTKPHFICCIKPNRKQLPSIYDEDLVLQQLRCCGVFEVV
RISRSGYPAQMTHQKFAERYGSLLLETNESQDPLSISVAVLKQFNVLPEMYQIGYTKLYLRTGQ
IGALEDWRKQIGAVEDRSKKALPTVADGEIQGKYTNDKASSYSASGSQLLDKQLAAIIDLQSII
RGCLVQKHLSNLHSLRRLRSRRTMSRKFSKVKDIPNEQPSAMAELQRRVLDVESTLGQKEQENA
TLRQQVQQANMLKEQQNATLREQVQQANMQKEQENATLREQIQQANMQKEQQNATLREQLQQYE
VKMQKEQEKKKKMEETLQKQIASLQASLAAAKRSDGSDGQLGRGELSSKDNVSMQPRTFGGNKP
DVGGVENGLSGLAKEFEQQKQTFEDDMSKMDPNSSSYEELRKLKRSFRAWKKDYKMRLKELKAK
IPKQGGQKEQDKTRKTWWPKRGKVLQMQNCNKTTARTAPHKES
Repeat found in V6N13_031630
Repeat occurs 4 times in a sequence of 337 amino acids
Location between 4254486 and 4256864
Coverage of 17.8 %
Instances:
MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL |
pattern: MQIFVKTLTGKTITL
MKPCPIPYDIGLAFFVSNSTTSFTPSSISSLKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ
DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVES
SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKT
LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL
RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY
NIQKESTLHLVLRLRGGF

Similar gene clusters

JBBPBL010000099 - Cluster 186 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000099 - Gene Cluster 186. Type = saccharide. Location: 586731 - 678100 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

Similar known gene clusters

JBBPBL010000099 - Cluster 187 - Terpene

Gene cluster description

Download cluster GenBank file
JBBPBL010000099 - Gene Cluster 187. Type = terpene. Location: 3178267 - 3227029 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000099 - Cluster 188 - Lignan

Gene cluster description

Download cluster GenBank file
JBBPBL010000099 - Gene Cluster 188. Type = lignan. Location: 3807859 - 3927609 nt. Click on genes for more information.
Show pHMM detection rules used
plants/lignan: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Dirigent]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000101 - Cluster 189 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000101 - Gene Cluster 189. Type = cyclopeptide. Location: 3717193 - 4146425 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Similar gene clusters

JBBPBL010000101 - Cluster 190 - Alkaloid

Gene cluster description

Download cluster GenBank file
JBBPBL010000101 - Gene Cluster 190. Type = alkaloid. Location: 4075070 - 4123247 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000108 - Cluster 191 - Alkaloid

Gene cluster description

Download cluster GenBank file
JBBPBL010000108 - Gene Cluster 191. Type = alkaloid. Location: 1568215 - 1631159 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000108 - Cluster 192 - Alkaloid

Gene cluster description

Download cluster GenBank file
JBBPBL010000108 - Gene Cluster 192. Type = alkaloid. Location: 4438815 - 4547830 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000114 - Cluster 193 - Alkaloid

Gene cluster description

Download cluster GenBank file
JBBPBL010000114 - Gene Cluster 193. Type = alkaloid. Location: 2983122 - 3061873 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000117 - Cluster 194 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000117 - Gene Cluster 194. Type = saccharide. Location: 1 - 155866 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

Similar known gene clusters

JBBPBL010000121 - Cluster 195 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000121 - Gene Cluster 195. Type = saccharide. Location: 2426774 - 2520551 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000123 - Cluster 196 - Fatty_acid-saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000123 - Gene Cluster 196. Type = fatty_acid-saccharide. Location: 2715100 - 2775396 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000124 - Cluster 197 - Terpene

Gene cluster description

Download cluster GenBank file
JBBPBL010000124 - Gene Cluster 197. Type = terpene. Location: 1965710 - 2054415 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000127 - Cluster 198 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000127 - Gene Cluster 198. Type = cyclopeptide. Location: 769119 - 1005667 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Similar gene clusters

JBBPBL010000127 - Cluster 199 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000127 - Gene Cluster 199. Type = saccharide. Location: 1199446 - 1250414 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000127 - Cluster 200 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000127 - Gene Cluster 200. Type = cyclopeptide. Location: 1728572 - 1987151 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Similar gene clusters

JBBPBL010000127 - Cluster 201 - Fatty_acid

Gene cluster description

Download cluster GenBank file
JBBPBL010000127 - Gene Cluster 201. Type = fatty_acid. Location: 2187958 - 2229357 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000128 - Cluster 202 - Alkaloid

Gene cluster description

Download cluster GenBank file
JBBPBL010000128 - Gene Cluster 202. Type = alkaloid. Location: 316046 - 377124 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000132 - Cluster 203 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000132 - Gene Cluster 203. Type = cyclopeptide. Location: 1519715 - 1674282 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_016485
Repeat occurs 8 times in a sequence of 643 amino acids
Location between 1583831 and 1585763
Coverage of 16.17 %
Instances:
ATPPALSPTPSDL | ATPPAIAATPPAL | ATPPALSATSPAM | ATPPTLSATPPAM | ATPPAMAATPPTL
ATPPTLSATPPAM | ATPPAMVALPPIV | ATPPGSAALAAAS |
pattern: ATPP[AGT][LSMI][ASV][AP][LT][ASP][ASP][ATDI][LSVM]
MRKPSKESELSTEPIGQNLIKLISNVCFSVFVLSVLIFTAIAITYQPPDPWLESAPSLTKLFT
QTENATFKTDDSIIKTGEDLLSAPAPATPPALSPTPSDLAATPPAIAATPPALSATSPAMSATP
PTLSATPPAMAATPPTLSATPPAMVALPPIVAATPPGSAALAAASPALAVNSVAETMIEKSKEK
TSNSSLKSECEKLKAVNCSDPRLLLAVKKFNLKTFKSIVFLEYQTPVNGTKPDECDVFWRFRNR
KEKSWRKYRDFRRFQFGISENCTYKVMHTGPWHSGINARLPRIRPNTTRSSGGTWKPKLAPSIR
DEEINDTIPTLGSEMNFRKGKYLYYARGGDYCKGMNQYLWSFLCGLGEAMYLNRTFVMDLNLCL
SATYSSTNKDEEGKDFRFYFDFEHLKETVSVVGESEFLRDWKKWDKGHKRKVPVKKVKTHKVTP
MQLKKDKSTIIWRQFDGPEPENYWYRVCEGQAAKYIHRPWHAIWKSKRLMNIVTEISGRMDWDF
DALHVVRGEKARNKQLWPHLDSDTSPEAILAKVKEMVQPWRNLYIATNEPFYNYFDNLRSHYKV
HLLDDYKELWSDTSEWYNETAMLNNGKPVEFDGYMRVAVDTEVLYRSKIRVETFYNLTKDCKDG
INTC
Repeat found in V6N13_016489
Repeat occurs 3 times in a sequence of 364 amino acids
Location between 1595792 and 1598204
Coverage of 12.36 %
Instances:
DFSVSLPDEFDDWSE | DFSGNHENKGPHNES | DFSGNHENKGPHNES |
pattern: DFS[GV][SN][LH][EP][ND][EK][GF][DP][DH][WN][ES][ES]
MAFQFLFVFTLLNIVFAESNGVVPEEVYWESVFPNNPMPKGLKDILPTGKYDFSVSLPDEFDD
WSEDFSGNHENKGPHNESKANSILGHANPSKEFSAPTGKFDWSSLNSGNLAKTDEFDDWSEDFS
GNHENKGPHNESKGKGVASIDETIFFFQKDLRSGKLVNLPNLVTRDKTPFLQDRVAKSIPFSSD
KLSEILNYFSLKPQTWEANIMYKTIKGCERVAMKGEQKFCATSLESFIDSSISELGKQIQLLSS
ELSKETKNPLFTITRGMQNMGDNELVLVCHKKKYPGAVFSCHSINRTTLYKVPLVGKDGTKANA
LAVCHKDTSAWNPKHMAFRILKTKPGTDPVCHFLFRDTLVWISNK

Similar gene clusters

JBBPBL010000132 - Cluster 204 - Fatty_acid-saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000132 - Gene Cluster 204. Type = fatty_acid-saccharide. Location: 1821307 - 2024567 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000135 - Cluster 205 - Fatty_acid

Gene cluster description

Download cluster GenBank file
JBBPBL010000135 - Gene Cluster 205. Type = fatty_acid. Location: 225552 - 327622 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000135 - Cluster 206 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000135 - Gene Cluster 206. Type = cyclopeptide. Location: 304875 - 1290089 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Similar gene clusters

Similar known gene clusters

JBBPBL010000136 - Cluster 207 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000136 - Gene Cluster 207. Type = saccharide. Location: 2075380 - 2230435 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000151 - Cluster 208 - Saccharide

Gene cluster description

Download cluster GenBank file
JBBPBL010000151 - Gene Cluster 208. Type = saccharide. Location: 570260 - 665164 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000151 - Cluster 209 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000151 - Gene Cluster 209. Type = cyclopeptide. Location: 1072383 - 1414308 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

The following known motifs were found in CDS V6N13_062297
Location between 1129403 and 1141013
.L.Y..Y was found 2 times in this sequence
Sequence:
MARFQYRFPHLFVVLFCTAFVSASHSYLESDFSMIDSGSNGLLLYHDYSPPAPPPPPPHAPSV
SCTDDLGGVGSLDSTCQIVADLNLTCDVYIVGKGNFYILPGVRFHCPILGCSITVNISGNFSLG
ENSTVVSGSFQLAAYNASFFNGSAVNTTGWAGDPPPQTSGSPQGVDGAGGGHGGRGACCLVDDR
KMAGDIWGGDAYSWSSLQEPSSYGSKGGTTSKDVDYGGRGGGLVRVEIKELLEVNGSLLADGGD
GGTKGGGGSGGSIYIKSRKMIGSGRISACGGNGFGGGGGGRVSVDVFSRHDEPKIYVHGGVSHG
CPENAGAAGTLYDAVPRSLTVDNHNMSTDTDTLLLEFPYQPLWTNVYIKNCARASVPLLWSRVQ
VQGQISLLSRGMLSFGLAHYASSEFELLAEELLMSDSTIKVYGALRMTVKIFLMWNSKMLIDGG
EEMTVATSWLESSNLVVLKESSIIESNANLGVHGQGSLNLSGPGDTIQAQRLVLSLFYSIYVGP
GSVLRGPLETASSGVVMPKLYCGLQHCPIELLHPPEDCNVNSSLPFTLQICRVEDITVEGLMKG
SVVHFHWARSVSVQSSGVISASGMGCIGGIGRGNFLDNGIGSGGGHGGKGGFACYNGTCVEGGI
SYGNSELPCELGSGSGNESSANSTAGGGVIVMGSMEHPLPSLSVEGAVRADGESFGETDWHQGY
SVFNDSSIAPGGGSGGTVLLFLHTLTLGKSATVSSVGGYGTSKGSGGGGGGRIHFHWSDIPTGD
VYQPIASVKGSIYARGGLGRNESDGGDGTVTGKACPKGLYGTFCMECPVGTYKNVSGSDTSLCR
PCPASELSRRAIYVAVRGGVAETPCPYECVSDRYHMPHCFTALEELIYTFGGPWLFGFLLVGLL
ILLALVLSVARMKFVGVEELPGPAPTQHGSQRDHSFPFLESLNEVLETNRVEESQSHVHRMYFM
GPNTFSEPWHLPHTPPEEIKEIVYEGAYNTFVDEINAIAAYQWWEGAIYTILSILAYPLALSWQ
QWRRRMRLQRLREFVRSEYDHACLRSCRSRALYEGIKVSATSDLMLAYVDFFLGGDEKRTDLPP
RLPQRFPMAIIFGGDGSYMAPFSLQIDNILTSLMSQLVAPTTWYRLVAGLNAQLRLVCRGRLRV
TFKPVIRWLETHANPALRIHGVHIDLAWFQAAPGGYRQYGLLMYSVEEENEPMSLGNTNGVKTE
PLSGVNTGYMSNQSGYTRENVLLTHGHESSEGFSRRKRSYKGLIDANGLHKVEEKRDIFYLLSF
IVHNTKPVGHQDLVGLVISMLLLGDFSLMLLTFLQLYSISLVDVFLVLFILPLGLLLPFPSGIN
ALFSHGPRRSAGLARFYALWNLTSLINVGVAFLCGYIHYNRPLSSSKKTPSLQPWSFNMDESEW
WIFPVGLVLCKLLQSQLTNWHVANLEIKDRSLYSSDFEVFWQR
Repeat found in V6N13_062323
Repeat occurs 3 times in a sequence of 628 amino acids
Location between 1324636 and 1327927
Coverage of 2.87 %
Instances:
IPSSPN | IPSQSN | IPSSSI |
pattern: IPS[SQ][SP][NI]
MASSGLPVLVHCSAKRPSISIPSSPNFNDFKATLSSAFKPFLKEIQQLPMRMDVAAKDTSLKL
VDAFVDSMFQIVEQPLIPSQSNLAPVDELKEAVQVTSMQGEIPYDFPEGVYIRNGPNPIFGALT
STSSMFGRTSSVWVEGEGMLHALYFCRGLDGRWTVVYKNRYVETETFKLEKHRNKPCFLPAAEG
DSPAVLSTYLLNLMRFSKANKQLSNTNVFEHGGKIYSVAENDKPQEINILTLQTLDDWDVNGAW
NRPFSSHPKKAPGTGELVILGVDATKPFAVLGLISADGKKLLHQVDLKLNRCSLLHDVGVTPRY
NVVMDHPLTIDLKRLVRGGSLFKYENDGGASIGIMPRYGDEDSIQWFKVKPNCTFHIFNCFEDG
DEVKSWPDHSQIQVVMWGCRALDSIIPGPEMGENKFDWFSRKLRPINSSEESIDDEVSKDQLIF
PRPYEWRMNRQTGDVKERNLTGTEFAMDFPIINEAFIGLQNKYGYSQLRDSVASSASGVAKYGG
LAKLYFGEQSPESSLREEQGLIKVEYHMFEKNTFCSGSAFVPKDEGVDEDDGWVITFVHNEDTD
TSQVLIIDAKSFTSKPVAKITLPYRVPYGFHGAFMPMPLQNEMLTIIPSSSIC

Similar gene clusters

JBBPBL010000151 - Cluster 210 - Putative

Gene cluster description

Download cluster GenBank file
JBBPBL010000151 - Gene Cluster 210. Type = putative. Location: 1519330 - 1605999 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000157 - Cluster 211 - Alkaloid

Gene cluster description

Download cluster GenBank file
JBBPBL010000157 - Gene Cluster 211. Type = alkaloid. Location: 77172 - 176102 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000166 - Cluster 212 - Polyketide

Gene cluster description

Download cluster GenBank file
JBBPBL010000166 - Gene Cluster 212. Type = polyketide. Location: 24344 - 78355 nt. Click on genes for more information.
Show pHMM detection rules used
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

JBBPBL010000166 - Cluster 213 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000166 - Gene Cluster 213. Type = cyclopeptide. Location: 1279561 - 1517334 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Similar gene clusters

JBBPBL010000172 - Cluster 214 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000172 - Gene Cluster 214. Type = cyclopeptide. Location: 360878 - 611659 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_045747
Repeat occurs 8 times in a sequence of 1021 amino acids
Location between 410584 and 413764
Coverage of 4.7 %
Instances:
FSGDIP | FSGQLP | FSGEIP | FSGKLP | FSGEIP
FSGKIP | FSGELP | FSGEIP |
pattern: FSG[EQKD][LI]P
MSQLCLPFLFFLFISIPFKATSHDIKTERTVLLELKQQFGNPPPLAHWNSSSSPCDWPEINCT
ANSITEVHLREKNIVFSVPPTICDLKNLTYLDLYNNFIPGGFPILYNCSKLQILDLSQNYFVGS
IPDDIDRLSTLVYLDISGNNFSGDIPPSIGRLPVLNTLNIVQNQFDGTFPKEIGNLSNLEVLNM
AYNEFVPMRIPSEFGQMSKLLYLWMTQTNLMGEIPESFDNLSSLEHLDLAVNNLEGPIPSSLFS
LKNLTVVYLFYNKLSGEIPKTVDTLSLIEIDLSVNSLTGSIPKDFGKLQRLEILNLAYNQLTAK
LPTSIAQLPALRDFRVFHNKLSGVLPPEFGLHSGLEGFEVSENQFSGQLPEHLCTGGVLQGVFA
YTNNLTGRIPESLGNCPTLLTIQLHNNKFSGEIPRHLWTTVNLLALLLTNNSFSGKLPSRLAWN
MSRVVWVEISNNKFSGEIPPGIASWSNLVEFQASNNLFSGKIPKKVTNLPRLTTLLLNGNDFSG
ELPSEIISWRSLTTLDVSNNKLSGEIPVAIASLPDLLNLDLSENQFSGEIPPEIGNLKLTYLNL
SSNKLVGKIPKMLNNLAYEGSFSKNSDLCADHPILKLPDCNSKLHQPDKLSSKCIAMIVALSTL
ASLIILFLSFFLVRDYRRKKYGQYLATWKLISFQRLVFTKGSILSNLTDNNLIGSGGSGKVYRI
AINHSGEYVAVKKIWNSKKVDHKLEKEFLAEVEILSHIRHSNIVKLLCCISSEDSKLLVYEYME
NQSLDRWLHGNKRSPISGMNSVHHAVLDWPRRLQIAVGAAKGLCYIHHECLTPIIHRDVKSSNI
LLDSEFNAKIADFGLAKMLTRHASAHSMSTVAGSFGYLAPEYAYTTKVNAKVDVYSFGVVLLEL
VTGKEANNTDENMNLAEWAWQHFSDDKPVEGILDPEVKETSHLEEMILVYKVGILCTHASPSNR
PSMNLVSHILRSCCLPNGHAAKKLGSKFDVARLLGRDTPSYLSGYNHGKKGSEEDDNMINIV
Repeat found in V6N13_045748
Repeat occurs 8 times in a sequence of 983 amino acids
Location between 420925 and 424072
Coverage of 4.88 %
Instances:
FSGDIP | FSGQLP | FSGEIP | FSGKLP | FSGEIP
FSGKIP | FSGELP | FSGEIP |
pattern: FSG[EQKD][LI]P
MSQLCLPFLLLLFISIPFNATSHDIKTERTVLLELKQQLRNPPSLAHWNSSSSPCDWPEINCS
SNSITEVHLGEKNIVVSVPPTICDLKNLTYLDLYNNFIPGGFPVLYNCSKLQILVLSQNYFVGP
IPDDIDRLSTLVYLDISGNNFSGDIPPSIGRLPVLNTLNIVQNQFNGTFPKEIGNLSNLEVLHM
AYNKFVPMRIPSEFGQMSKLLFLWMTQTNLMGEIPESFGNLSSLQHLDLAVNNLEGHIPSSLFS
LKNLTKVYLYHNKLSGEIPKTVDALSLIEIDLSENSLTGSIPEDFGKLQHLEILMLADNQLTAE
LPTSIAQLPALRDFRVFQNKLSGVLPPEFGLHSGLEGFEVSENQFSGQLPEHLCAGGVLQGVVA
YTNNLTGQIPGSLGNCPTLRTIQLHNNKFSGEIPRRLWTTFNLSILLLTNNSFSGKLPNRLAWN
MSRVEISNNKFSGEIPSGIASWSNLVVFQASNNLFSGKIPKEVTNLSRLTTLLLNGNDFSGELP
SEIISWRSLTTLDVSNNKLSGEIPVAIASLPDLLNLDLSENQFSGEIPPEIGNLKLTYLNLSSN
QLVGKIPQKLNNLAYEGSFSKNSDLCADHPILKLPDCNSKLISLINFRDYRRKKYGQYLATWKL
TSFQRLVFTKGGILSNLTDNNLIGSGGSGKVYRIAINRSGEYVAVKKIWNSKKVDHKLEKEFLA
EVEILSNIRHSNIVKLLCCISSEDSKLLVYEYMENQSLDRWLHGNKRSPISGMNSVHHAVLDWP
RRLQIAVGAAQGLCYMHHECLTPIIHRDVKSSNILLDSEFNAKIADFGLAKMLTRHASAHSMST
VAGSFGYLAPEYAYTTKVNAKVDVYSFGVVLLELVTGKEANNTDENTNLAEWAWQHFSDDKPVE
EILDPEAKETCHLEEMILVYKVGILCTHASPSNRPSMKEVSHFLRTCCLPNGHAAKKLGSEFDV
APLLGRDTPSYLSGHNHGKKGCSE

Similar gene clusters

JBBPBL010000192 - Cluster 215 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000192 - Gene Cluster 215. Type = cyclopeptide. Location: 171077 - 536840 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_028097
Repeat occurs 3 times in a sequence of 259 amino acids
Location between 270561 and 272089
Coverage of 12.74 %
Instances:
ENGGAGIHGIQ | ENGGAGIHGIQ | ENGGRIFFPFV |
pattern: ENGG[AR][GI][FI][FH][GP][FI][QV]
MINIFFQCKEEEEMETEQRLENSTLFWCLFFCLDSEVIVLFQGFQDFGLVKPMEEMVPPNTCT
RGAMSEKKTRPPEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTDGGSLRNVPVGGGS
RKNRRPLLSPSSSASAKVSDLKPNNFSHTSSQNPKLHNGQQDLNLGFPAKLLLGFSFELLRAGM
ESRGLNSLVPAPAPYSTGFSMQDHKPTLSFPMDELENGGAGIHGIQENGGAGIHGIQENGGRIF
FPFV

Similar gene clusters

JBBPBL010000366 - Cluster 216 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
JBBPBL010000366 - Gene Cluster 216. Type = cyclopeptide. Location: 1 - 62359 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in V6N13_038542
Repeat occurs 14 times in a sequence of 535 amino acids
Location between 39888 and 41610
Coverage of 39.25 %
Instances:
KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLMYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY
KDFDPNRPQFPLLYY | KDFDPNRPQFPLIYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLLYY
KDFDPNRPQFPLMYY | KDFDPNRPQFPLLYY | KDFDPNRPQFPLMYY | KDFDPNRPQFPLLYY |
pattern: KDFDPNRPQFPL[LMI]YY
MTSFLSIFAVFCILLSAETIAARKAPDRQWTVEADEQPMVEAIKPTQQESFVKDFDPNRPQFP
LLYYSKKDGQSQEPTENDKSFVKDFDPNRPQFPLLYYSKKDGQFQEPTENDKSFVKDFDPNRPQ
FPLMYYSKKDGQSQVPPGTDNSFLKDFDPNRPQFPLLYYSKKDGQSQGPAETDKSFVKDFDPNR
PQFPLLYYSKKDVQSQESTETDKSFIKDFDPNRPQFPLLYYSKKDGQSQELTENDKSFVKDFDP
NRPQFPLIYYSKKDGQSQVPAENDKSFVKDFDPNRPQFPLLYYSKKDGQSQEPTKNDKSFVKDF
DPNRPQFPLLYYSKKDGQSQELTENDKSFVKDFDPNRPQFPLLYYSKKDGQSQEPTENDKSFVK
DFDPNRPQFPLMYYSKKDGQSQAPAETDKSFLKDFDPNRPQFPLLYYSKKDGQSQEPTENDKSF
VKDFDPNRPQFPLMYYSKKDGQSQVPAETDKSFVKDFDPNRPQFPLLYYSKKDGRSQEVAENDK
SFVNDSESKLSEVEKAFVEVLENI

Similar gene clusters