Identified secondary metabolite clusters

Cluster Type From To Size (kb) Core domains Product/substrate predicted by subgroup Most similar known cluster MIBiG BGC-ID
The following clusters are from record OZ012735.1:
Cluster 1Alkaloid-Saccharide1067353810909947236.41Pyridoxal_deC, UDPGT_2*saccharide-2, cyanogenic glucoside, monoterpenoid--
Cluster 2Alkaloid-Fatty_acid109935567110817538881.97BBE, FAD_binding_4, FA_hydroxylase---
Cluster 3Cyclopeptide8216251388269930975367.96BURP---
Cluster 4Fatty_acid863948525864467163518.64AMP-binding, Transferase, p450---
Cluster 5Saccharide8980579498995057991447.85AMP-binding, Amino_oxidase, Glyco_hydro_1, UDPGT_2---
The following clusters are from record OZ012736.1:
Cluster 6Fatty_acid-Saccharide13366062146130041246.94FA_hydroxylase, Methyltransf_11, UDPGT_2flavonoid, oleananes--
Cluster 7Cyclopeptide61105879685016997395.82BURP---
Cluster 8Transporter_associated-Saccharide4207292284219578601228.63ABC2_membrane, ABC_tran, LTP_2, Methyltransf_11, Prenyltransf, UDPGT_2, p450---
Cluster 9Transporter_associated-Saccharide4415906174428942481303.63ABC2_membrane, Epimerase, Peptidase_S10, UDPGT_2, p450---
Cluster 10Cyclopeptide4527383434613393658601.02BURP---
Cluster 11Saccharide493416719493725357308.64Transferase, UDPGT_2flavonoid--
Cluster 12Saccharide-Polyketide5264666685274817651015.10Cellulose_synt, Chal_sti_synt_C, Chal_sti_synt_N, p450---
Cluster 13Saccharide551092719551856910764.19Epimerase, UDPGT_2---
Cluster 14Saccharide5583926025595691611176.56ADH_N, ADH_zinc_N, Epimerase, Methyltransf_7, UDPGT_2flavonoid, oleananes--
The following clusters are from record OZ012737.1:
Cluster 15Putative1058200210939742357.74ADH_N_2, ADH_zinc_N, Abhydrolase_3, NAD_binding_1, Transferase, p450---
Cluster 16Lignan-Saccharide457398847458204787805.94ADH_N, Aldo_ket_red, Dirigent, Methyltransf_11, UDPGT_2flavonoid-3, oleananes-3--
Cluster 17Saccharide4705964604720267841430.32Epimerase, UDPGT_2, adh_short_C2flavonoid, oleananes--
Cluster 18Fatty_acid5780577605790628861005.13CER1-like_C, FA_hydroxylase, Lycopene_cycl, Methyltransf_11---
Cluster 19Lignan605730697606542013811.32Abhydrolase_3, Dirigent, adh_short_C2---
Cluster 20Lignan704881105705313638432.53Aldo_ket_red, Dirigent, Epimerase, Transferase---
The following clusters are from record OZ012738.1:
Cluster 21Saccharide28940203141781247.76UDPGT_2, p450small phenolic-4--
Cluster 22Transporter_associated-Fatty_acid59601796387869427.69ABC_tran, ADH_N_2, ADH_zinc_N, CER1-like_C, FA_hydroxylase, Methyltransf_11, p450---
Cluster 23Saccharide64722795661187071395.91AMP-binding, Cellulose_synt, p450---
Cluster 24Cyclopeptide10963607213190021822264.15BURP---
Cluster 25Saccharide633734794634170729435.942OG-FeII_Oxy, DIOX_N, Glyco_hydro_1, Peptidase_S10---
The following clusters are from record OZ012739.1:
Cluster 26Cyclopeptide4608977084646340413736.33BURP---
Cluster 27Saccharide467284416468017198732.78ADH_N, ADH_zinc_N, Lipoxygenase, UDPGT_2cyanogenic glucoside-2, monoterpenoid-2--
Cluster 28Saccharide468360752469187976827.22NAD_binding_1, Peptidase_S10, Prenyltransf, UDPGT_2cyanogenic glucoside-4, monoterpenoid-4--
Cluster 29Alkaloid4729861064739911021005.00Aminotran_1_2, Cu_amine_oxid, p450---
Cluster 30Polyketide5166404895176731821032.692OG-FeII_Oxy, Chal_sti_synt_C, Chal_sti_synt_N, DIOX_N, Methyltransf_11---
Cluster 31Saccharide602486611603175399688.79Aminotran_1_2, Glycos_transf_2, SE---
Cluster 32Cyclopeptide6531631206592252956062.18BURP---
Cluster 33Cyclopeptide6802672296861859875918.76BURP---
Cluster 34Cyclopeptide6831180556883793745261.32BURP---
The following clusters are from record OZ012740.1:
Cluster 35Cyclopeptide113006521300.65BURP---
Cluster 36Cyclopeptide24365987268992082533.22BURP---
Cluster 37Cyclopeptide32601651354061882804.54BURP---
Cluster 38Saccharide501665321501800468135.15Amino_oxidase, Cellulose_synt, oMT---
Cluster 39Alkaloid633089516633365220275.70Cu_amine_oxid, Lipoxygenase---
Cluster 40Saccharide6449359136462272411291.33Acetyltransf_1, UDPGT_2hydroxycinnamate-4--
The following clusters are from record OZ012741.1:
Cluster 41Putative17579442128249370.31AMP-binding, ERG4_ERG24, Epimerase, GMC_oxred_C, GMC_oxred_N---
Cluster 42Saccharide3334313533357079752276.62AMP-binding, Amino_oxidase, Glyco_hydro_1, Lipoxygenase---
Cluster 43Lignan378821848379729129907.28Dirigent, p450---
Cluster 44Lignan384992704385711656718.95Dirigent, p450---
Cluster 45Fatty_acid-Polyketide4629559324663831173427.18CER1-like_C, Chal_sti_synt_C, Epimerase, FAE1_CUT1_RppA, FA_hydroxylase, NAD_binding_4, p450---
Cluster 46Cyclopeptide4796757524861696256493.87BURP---
Cluster 47Cyclopeptide4810386604868248395786.18BURP---
Cluster 48Cyclopeptide4822031214887612506558.13BURP---
Cluster 49Cyclopeptide4901700214942189294048.91BURP---
Cluster 50Alkaloid-Saccharide529607097530250857643.76AMP-binding, Bet_v_1, Cellulose_synt, p450---
Cluster 51Saccharide535007888535432529424.64Dimerisation, Methyltransf_2, Transferase, UDPGT_2*saccharide-3--
Cluster 52Terpene-Saccharide545134628546113947979.32Epimerase, Glyco_hydro_1, Terpene_synth, Terpene_synth_C---
Cluster 53Saccharide579706736580536446829.71Cellulose_synt, Dimerisation, Methyltransf_2, p450---
Cluster 54Alkaloid-Fatty_acid608731383609670935939.55BBE, FAD_binding_4, FA_hydroxylase, Methyltransf_11---
Cluster 55Terpene631365179631845840480.66Methyltransf_11, Prenyltrans, Transferase---

OZ012735 - Cluster 1 - Alkaloid-saccharide

Gene cluster description

Download cluster GenBank file
OZ012735 - Gene Cluster 1. Type = alkaloid-saccharide. Location: 10673538 - 10909947 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012735 - Cluster 2 - Alkaloid-fatty_acid

Gene cluster description

Download cluster GenBank file
OZ012735 - Gene Cluster 2. Type = alkaloid-fatty_acid. Location: 109935567 - 110817538 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012735 - Cluster 3 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
OZ012735 - Gene Cluster 3. Type = cyclopeptide. Location: 821625138 - 826993097 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Similar gene clusters

OZ012735 - Cluster 4 - Fatty_acid

Gene cluster description

Download cluster GenBank file
OZ012735 - Gene Cluster 4. Type = fatty_acid. Location: 863948525 - 864467163 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012735 - Cluster 5 - Saccharide

Gene cluster description

Download cluster GenBank file
OZ012735 - Gene Cluster 5. Type = saccharide. Location: 898057949 - 899505799 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012736 - Cluster 6 - Fatty_acid-saccharide

Gene cluster description

Download cluster GenBank file
OZ012736 - Gene Cluster 6. Type = fatty_acid-saccharide. Location: 13366062 - 14613004 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012736 - Cluster 7 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
OZ012736 - Gene Cluster 7. Type = cyclopeptide. Location: 61105879 - 68501699 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in LATHSAT_LOCUS6366
Repeat occurs 3 times in a sequence of 537 amino acids
Location between 67332330 and 67335245
Coverage of 3.91 %
Instances:
SPPPHKN | SPPSHKN | SPPPISK |
pattern: SPP[SP][HI][SK][NK]
MSALTLKTFTYMFLITFLIWSSNFECCIARRGNHWRQTKTFSSSLFKKRGKSYNGNTHNKNHH
NGGSNSKPKSPPPHKNTPPLSPKSPPSHKNVPSSPPPISKPKISPSTPPPKGYNGAHSTFFNVL
DYGAKGDGNTDDTKAFEATWAATCKVEASTMMIPANYTFFVRPISFSGPYCKPNIVFQLEGTII
APTNPNAWSGVTLQWLEFTKLEGIVIQGNGVIDGRGSVWWQDFPYDNPIDDEEKLIVPLNHTQK
PPMPVQNEIGRTMPSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDSCNRVLVHDVSISSPGD
SPNTDGIHLQNSKDVLIYSSKLACGDDCISIQTGCSNVYVHNVDCGPGHGISIGSLGKDNTRAC
VSNITVRDVNIHNSMNGVRIKTWQGGSGSVQGVLFSNIQVTEVQLPIVIDQFYCDKRTCTNHTS
AVSLEGINYERIKGTYTVKPVHFACSDSFPCVDVSLATVQLKPIQEQYHLYDPFCWQTFGELKT
PTVPPIGCLQIGKPTNNRIQTDHDIC

Similar gene clusters

OZ012736 - Cluster 8 - Transporter_associated-saccharide

Gene cluster description

Download cluster GenBank file
OZ012736 - Gene Cluster 8. Type = transporter_associated-saccharide. Location: 420729228 - 421957860 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))
plants/transporter_associated: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[MatE/LTP_2/ABC2_membrane/ABC_tran]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012736 - Cluster 9 - Transporter_associated-saccharide

Gene cluster description

Download cluster GenBank file
OZ012736 - Gene Cluster 9. Type = transporter_associated-saccharide. Location: 441590617 - 442894248 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))
plants/transporter_associated: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[MatE/LTP_2/ABC2_membrane/ABC_tran]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012736 - Cluster 10 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
OZ012736 - Gene Cluster 10. Type = cyclopeptide. Location: 452738343 - 461339365 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

No repeats detected in this cluster.

Similar gene clusters

OZ012736 - Cluster 11 - Saccharide

Gene cluster description

Download cluster GenBank file
OZ012736 - Gene Cluster 11. Type = saccharide. Location: 493416719 - 493725357 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012736 - Cluster 12 - Saccharide-polyketide

Gene cluster description

Download cluster GenBank file
OZ012736 - Gene Cluster 12. Type = saccharide-polyketide. Location: 526466668 - 527481765 nt. Click on genes for more information.
Show pHMM detection rules used
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012736 - Cluster 13 - Saccharide

Gene cluster description

Download cluster GenBank file
OZ012736 - Gene Cluster 13. Type = saccharide. Location: 551092719 - 551856910 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012736 - Cluster 14 - Saccharide

Gene cluster description

Download cluster GenBank file
OZ012736 - Gene Cluster 14. Type = saccharide. Location: 558392602 - 559569161 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012737 - Cluster 15 - Putative

Gene cluster description

Download cluster GenBank file
OZ012737 - Gene Cluster 15. Type = putative. Location: 10582002 - 10939742 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012737 - Cluster 16 - Lignan-saccharide

Gene cluster description

Download cluster GenBank file
OZ012737 - Gene Cluster 16. Type = lignan-saccharide. Location: 457398847 - 458204787 nt. Click on genes for more information.
Show pHMM detection rules used
plants/lignan: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Dirigent]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012737 - Cluster 17 - Saccharide

Gene cluster description

Download cluster GenBank file
OZ012737 - Gene Cluster 17. Type = saccharide. Location: 470596460 - 472026784 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012737 - Cluster 18 - Fatty_acid

Gene cluster description

Download cluster GenBank file
OZ012737 - Gene Cluster 18. Type = fatty_acid. Location: 578057760 - 579062886 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012737 - Cluster 19 - Lignan

Gene cluster description

Download cluster GenBank file
OZ012737 - Gene Cluster 19. Type = lignan. Location: 605730697 - 606542013 nt. Click on genes for more information.
Show pHMM detection rules used
plants/lignan: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Dirigent]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012737 - Cluster 20 - Lignan

Gene cluster description

Download cluster GenBank file
OZ012737 - Gene Cluster 20. Type = lignan. Location: 704881105 - 705313638 nt. Click on genes for more information.
Show pHMM detection rules used
plants/lignan: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Dirigent]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012738 - Cluster 21 - Saccharide

Gene cluster description

Download cluster GenBank file
OZ012738 - Gene Cluster 21. Type = saccharide. Location: 2894020 - 3141781 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012738 - Cluster 22 - Transporter_associated-fatty_acid

Gene cluster description

Download cluster GenBank file
OZ012738 - Gene Cluster 22. Type = transporter_associated-fatty_acid. Location: 5960179 - 6387869 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/transporter_associated: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[MatE/LTP_2/ABC2_membrane/ABC_tran]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012738 - Cluster 23 - Saccharide

Gene cluster description

Download cluster GenBank file
OZ012738 - Gene Cluster 23. Type = saccharide. Location: 64722795 - 66118707 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012738 - Cluster 24 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
OZ012738 - Gene Cluster 24. Type = cyclopeptide. Location: 109636072 - 131900218 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in LATHSAT_LOCUS14792
Repeat occurs 9 times in a sequence of 517 amino acids
Location between 114073683 and 114080482
Coverage of 12.19 %
Instances:
CKFGESC | CKFDHPI | CKFGSKC | CKFNHPN | CKFHHPK
CKFGVSC | CKFGERC | CKFGATC | CKFDHPP |
pattern: CKF[DNHG][VASHE][SRKTP][NICKP]
MENRIYASYSPTNYTVSGAPSTSPARFYNPDTMFLAHYRRTAEAAAAAAAIDIAPPGVSSRIS
SSSTANFLAHTNPWASAFTAANIASASLGLKRSSDALYHPTILSTIGQNEAWYTTNSLAKRPRY
ETGSTLSIYPHRPGERDCAHYMLTRTCKFGESCKFDHPIWVPDGGIPDWKEVPNNVPSETLPER
PGEPDCPFFLKTQKCKFGSKCKFNHPNVPSENADISGLPERPLEPPCAFYLKTGKCKYGVACKF
HHPKDIQIQSSDELSRTVEQTQTNSAVFDGAIGDAQPTKSLISPLLHNSKGLPVRQGEVDCPFY
MKTGSCKFGVSCRYNHPDMNAINPAMSALAPSAFASSAAANLNIGVINPAASFYQAFDPRLSNP
MAQVGMTESIYPQRPGMIECDFFMKTGICKFGERCKYHHPVDRSTSSLSKLQSNVKLTPAGLPR
REDVELCPYYLKTSTCKFGATCKFDHPPPGEVMEKAKSQGTSATNGEEEETKETNVNVAGSAPE
QCLDDV

Similar gene clusters

OZ012738 - Cluster 25 - Saccharide

Gene cluster description

Download cluster GenBank file
OZ012738 - Gene Cluster 25. Type = saccharide. Location: 633734794 - 634170729 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012739 - Cluster 26 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
OZ012739 - Gene Cluster 26. Type = cyclopeptide. Location: 460897708 - 464634041 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in LATHSAT_LOCUS19893
Repeat occurs 4 times in a sequence of 634 amino acids
Location between 462764868 and 462766880
Coverage of 4.42 %
Instances:
DSFKNYS | DSFKKYS | DSFTSYS | DSFQSYG |
pattern: DSF[QTK][SNK]Y[SG]
MKIHFIFLFLFFLLSFFHGSIATIGNKGISETQEYSFKQKTNPFTPKASLIRYWNTRISNKLP
DPIPNFFLSKASPLTPQHYANLINLLKQKPISANFYNSLCSTPYLFCSFDHPSEYYQSKKTTKP
DANFAVYSNKKFATYGSSRLGGVDSFKNYSNGLNTNNDSFKKYSTTSTRHSGQFNSYAENGNVA
NTNFTNYGSGSSSGTGDFKSYDKLVNDPNLGFTTYDSSATNHKLSFSSYGNETNSGSESFNSYG
KRVRSGNSDFTNYAVSSNILQSSFTGYGELGTGAANDSFTSYSFNGNNPRSTFKTYGAGSVSGS
DTFVSYRNRANVGDDSFQSYGSKSKSGAASFTNYGQSFNEGNDTFTEYGKGSSGKTAFGFKIYG
LGRAFKGYNKNGVSFSSYNNFSTFSGKTVNKLIEPGKFFRESMLKEGNVMVMPDISDKMPERSF
LPLSISSKLPFSSLEDVKKAFHARDGSATERVIKNALGDCERAPSVGETKRCVGSAEAMIDFAV
SVLGPNAVVKTTESVNGSKKSVMIGKVYGINGGKVTKSVSCHQTLYPYLLYYCHSVPKVRVYEA
EILDVETKSKINYGVAICHLDTSSWGPQHGAFIALGSEPGKIEVCHWIFENDMTWTIAS

Similar gene clusters

OZ012739 - Cluster 27 - Saccharide

Gene cluster description

Download cluster GenBank file
OZ012739 - Gene Cluster 27. Type = saccharide. Location: 467284416 - 468017198 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012739 - Cluster 28 - Saccharide

Gene cluster description

Download cluster GenBank file
OZ012739 - Gene Cluster 28. Type = saccharide. Location: 468360752 - 469187976 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012739 - Cluster 29 - Alkaloid

Gene cluster description

Download cluster GenBank file
OZ012739 - Gene Cluster 29. Type = alkaloid. Location: 472986106 - 473991102 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012739 - Cluster 30 - Polyketide

Gene cluster description

Download cluster GenBank file
OZ012739 - Gene Cluster 30. Type = polyketide. Location: 516640489 - 517673182 nt. Click on genes for more information.
Show pHMM detection rules used
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012739 - Cluster 31 - Saccharide

Gene cluster description

Download cluster GenBank file
OZ012739 - Gene Cluster 31. Type = saccharide. Location: 602486611 - 603175399 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012739 - Cluster 32 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
OZ012739 - Gene Cluster 32. Type = cyclopeptide. Location: 653163120 - 659225295 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Similar gene clusters

OZ012739 - Cluster 33 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
OZ012739 - Gene Cluster 33. Type = cyclopeptide. Location: 680267229 - 686185987 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in LATHSAT_LOCUS22072
Repeat occurs 7 times in a sequence of 1206 amino acids
Location between 681485218 and 681496217
Coverage of 3.48 %
Instances:
PPQINL | PPQRQN | PPQSQG | PPQSQG | PPQSQG
PPQSQG | PPQSMP |
pattern: PPQ[SRI][NMQ][LNGP]
MAAPNMDQFEAFFRRADLDGDGRISGAEAVGFFQGSNLPKHVLAQVWMHADQSKTGFLGRNDF
YNALRLVTVAQSKRDLTPDIVKAALFGPAAAKIPPPQINLAALPPQRQNPVAASSVGQMGVNAA
PTSTQNLAYRGQGLTGSDVSPQYLPSQQNANMRPPQSQGLVGSVANQQYLPSQQNANTRPPQSQ
GLAGSVVNQQYLPSQQSPNMRPPQSQGFSGFVTSPQYLPSQQSPNMRPPQSQGLPGSVANPQYL
PSQQNPTMRPTQSMPAGSAPGPQQFMPPGSAPGPQQFMPPGSAPGPQQFMPLGNTPRPPQSMPS
GTAPRPQQGFAGTNVSNANISNDWNSGRTAMPPSRPAGITQSVALPTPTSPSPVSPMSQPTAIT
TKALVVSGNGYPSNSALDDDFFSSAASTPKQDPIRQNYPVSSAPASSSIVPVSSSANPASRQSS
LDSLQSAFSMALTNSQIPRTQSSPNTAQQISPSASSPLTTSGRSVGLGNTTSDSSQPPWPKMRP
SDVQKYAKVFMEVDSDRDGKITGEQARSLFLSWRLPIDVLKKVWDLSDQDSDSMLSLKEFCYAL
YLMERYREGRPLPQSLPSNIIFDETLMSMTGHPKIPHGNAAWGVNPGFQQQQGMPGTRPVAPAA
GLRPPVQGTPARADGTVLPDQKKFGTSVLDDSFSNDTDNSKQNIETAEKKPEEMQNMILDSKEK
IELYRNKMQELVLYKSRCDNRLNEITERASADKREAESLGKKYEEKYKQVAEIASKLTIEEAKL
RDIQERKTELQQAIVKMEQGGSADGILQVRADRIQSDLEQLFKALAERCKKHEIDVKSIAMVQL
PDGWQPGDPEGAAVWDEDWDKFEDEGFANDLTFDTKSASSEPKPSFIPGENSFDDNLVHGSPVN
ANGMQENFTNGDYTVEEESSYAHSEDDLARSPHDSPFVTNTVESPSKEFSTSPFAKSSEADAET
HRSFDESTWGAFDNNDDVDSVWGFNPKDSDLDKQGDFFKSGDFGLNPIRTGSTFNDGAFQAKSP
FAFDDSVPGTPFSKFGNSPRYSEAGDHFDTSRFDSSFSMHESGNSPQAERFTRFDSISSSRDFG
NNFGNNHEKFSRFDSISSSKDFGYNPDKFSRFDSMSSSKDFGYNPETLTRFDSMSSSKDFGFGG
GQGHARFDSISSSKDLGYSAPFSFDDSDPFGSSGPFKVSSENQSPKKGSDKWSAF
Repeat found in LATHSAT__2113
Repeat occurs 7 times in a sequence of 1194 amino acids
Location between 681485218 and 681496217
Coverage of 3.52 %
Instances:
PPQINL | PPQRQN | PPQSQG | PPQSQG | PPQSQG
PPQSQG | PPQSMP |
pattern: PPQ[SRI][NMQ][LNGP]
MAAPNMDQFEAFFRRADLDGDGRISGAEAVGFFQGSNLPKHVLAQVWMHADQSKTGFLGRNDF
YNALRLVTVAQSKRDLTPDIVKAALFGPAAAKIPPPQINLAALPPQRQNPVAASSVGQMGVNAA
PTSTQNLAYRGQGLTGSDVSPQYLPSQQNANMRPPQSQGLVGSVANQQYLPSQQNANTRPPQSQ
GLAGSVVNQQYLPSQQSPNMRPPQSQGFSGFVTSPQYLPSQQSPNMRPPQSQGLPGSVANPQYL
PSQQNPTMRPTQSMPAGSAPGPQQFMPPGSAPGPQQFMPLGNTPRPPQSMPSGTAPRPQQGFAG
TNVSNANISNDWNSGRTAMPPSRPAGITQSVALPTPTSPSPVSPMSQPTAITTKALVVSGNGYP
SNSALDDDFFSSAASTPKQDPIRQNYPVSSAPASSSIVPVSSSANPASRQSSLDSLQSAFSMAL
TNSQIPRTQSSPNTAQQISPSASSPLTTSGRSVGLGNTTSDSSQPPWPKMRPSDVQKYAKVFME
VDSDRDGKITGEQARSLFLSWRLPIDVLKKVWDLSDQDSDSMLSLKEFCYALYLMERYREGRPL
PQSLPSNIIFDETLMSMTGHPKIPHGNAAWGVNPGFQQQQGMPGTRPVAPAAGLRPPVQGTPAR
ADGTVLPDQKKFGTSVLDDSFSNDTDNSKQNIETAEKKPEEMQNMILDSKEKIELYRNKMQELV
LYKSRCDNRLNEITERASADKREAESLGKKYEEKYKQVAEIASKLTIEEAKLRDIQERKTELQQ
AIVKMEQGGSADGILQVRADRIQSDLEQLFKALAERCKKHEIDVKSIAMVQLPDGWQPGDPEGA
AVWDEDWDKFEDEGFANDLTFDTKSASSEPKPSFIPGENSFDDNLVHGSPVNANGMQENFTNGD
YTVEEESSYAHSEDDLARSPHDSPFVTNTVESPSKEFSTSPFAKSSEADAETHRSFDESTWGAF
DNNDDVDSVWGFNPKDSDLDKQGDFFKSGDFGLNPIRTGSTFNDGAFQAKSPFAFDDSVPGTPF
SKFGNSPRYSEAGDHFDTSRFDSSFSMHESGNSPQAERFTRFDSISSSRDFGNNFGNNHEKFSR
FDSISSSKDFGYNPDKFSRFDSMSSSKDFGYNPETLTRFDSMSSSKDFGFGGGQGHARFDSISS
SKDLGYSAPFSFDDSDPFGSSGPFKVSSENQSPKKGSDKWSAF
Repeat found in LATHSAT__2114
Repeat occurs 7 times in a sequence of 1175 amino acids
Location between 681485218 and 681496217
Coverage of 3.57 %
Instances:
PPQINL | PPQRQN | PPQSQG | PPQSQG | PPQSQG
PPQSQG | PPQSMP |
pattern: PPQ[SRI][NMQ][LNGP]
MAAPNMDQFEAFFRRADLDGDGRISGAEAVGFFQGSNLPKHVLAQVWMHADQSKTGFLGRNDF
YNALRLVTVAQSKRDLTPDIVKAALFGPAAAKIPPPQINLAALPPQRQNPVAASSVGQMGVNAA
PTSTQNLAYRGQGLTGSDVSPQYLPSQQNANMRPPQSQGLVGSVANQQYLPSQQNANTRPPQSQ
GLAGSVVNQQYLPSQQSPNMRPPQSQGFSGFVTSPQYLPSQQSPNMRPPQSQGLPGSVANPQYL
PSQQNPTMRPTQSMPAGSAPGPQQFMPPGSAPGPQQFMPLGNTPRPPQSMPSGTAPRPQQGFAG
TNVSNANISNDWNSGRTAMPPSRPAGITQSVALPTPTSPSPVSPMSQPTAITTKALVVSGNGYP
SNSALDDDFFSSAASTPKQDPIRQNYPVSSAPASSSIVPVSSSANPASRQSSLDSLQSAFSMAL
TNSQIPRTQSSPNTAQQISPSASSPLTTSGRSVGLGNTTSDSSQPPWPKMRPSDVQKYAKVFME
VDSDRDGKITGEQARSLFLSWRLPIDVLKKVWDLSDQDSDSMLSLKEFCYALYLMERYREGRPL
PQSLPSNIIFDETLMSMTGHPKIPHGNAAWGVNPGFQQQQGMPGTRPVAPAAGLRPPVQGTPAR
ADGTVLPDQKKFGTSVLDDSFSNDTDNSKQNIETAEKKPEEMQNMILDSKEKIELYRNKMQELV
LYKSRCDNRLNEITERASADKREAESLGKKYEEKYKQVAEIASKLTIEEAKLRDIQERKTELQQ
AIVKMEQGGSADGILQVRADRIQSDLEQLFKALAERCKKHEIDVKSIAMVQLPDGWQPGDPEGA
AVWDEDWDKFEDEGFANDLTFDTKSASSEPKPSFIPGENSFDDNLVHGSPVNANGMQENFTNGD
YTVEEESSYAHSEDDLARSPHDSPFVTNTVESPSKEFSTSPFAKSSEADAETHRSFDESTWGAF
DNNDDVDSVWGFNPKDSDLDKQGDFFKSGDFGLNPIRTGSTFNDGAFQAKSPFAFDDSVPGTPF
SKFGNSPRYSEAGDHFDTSRFDSSFSMHESGNSPQAERFTRFDSISSSRDFGNNFGNNHEKFSR
FDSISSSKDFGYNPDKFSRFDSMSSSKDFGFGGGQGHARFDSISSSKDLGYSAPFSFDDSDPFG
SSGPFKVSSENQSPKKGSDKWSAF
Repeat found in LATHSAT_LOCUS22095
Repeat occurs 4 times in a sequence of 481 amino acids
Location between 683086657 and 683088930
Coverage of 8.32 %
Instances:
PPPTKPPPPP | PPPPPLPVKP | PPPPLPVKPE | PPPLPVKPET |
pattern: PPP[LTP][LKP][LVP][VKP][VKP][EKP][ETP]
MATNSPEIPAVTPSSTAEPPQPQIQTQPPPTKPPPPPLPVKPETPLPDSKPSNDTTLIHIPTH
SRWFSWDSIHESELRNIPDSSKNPRVYKYYRNSIVKFFRFNPNRKITFTDVRKTLVGDVGSIRR
VFDFLEAWGLINYHPSSSLAKPFKWEDKDTKTESASNSTESPPAPIKENAKRICSNCKNLCAIA
CFACDKNNMTLCARCFVRGSYKVGTSNTDFKRVEISEETKPDWTEKETLKLLECITNFGDDWKR
VSHHVIGRTDKECVARFLKLPFGDQFMHSQRFESAHLADDGRSDLLKPSVDAGCESETAGLDKS
SKRMRLTPLADASNPIMAQAAFLSALAGTEVPQAAAQAALRSLSDVYKSSRINHRSFPKQDAGV
ASNGVNASNSIQGSLLRANLECEKEESDVEKAISEIIEVQMKNIQDKLMNFEDLDLLMEKERQQ
LEQVKSLFFLDQLNLLFRKTSASATGEGNHVKRN
Repeat found in LATHSAT_LOCUS22098
Repeat occurs 11 times in a sequence of 526 amino acids
Location between 683225548 and 683227667
Coverage of 20.91 %
Instances:
YLDGWLKDIR | YLDGWLKDTR | YLDGWLKDTR | YLDGWLKNTR | YLDGWLKDIR
YLDGWLKDTR | YLDGWLKDTR | YLDGWLKDTG | YLDGWLKDNH | YLDGWLKDSH
YLDIGSKIFK |
pattern: YLD[IG][WG][LS]K[DNI][NISFT][KHRG]
MARRVVLSVLPFLLLLLINDYGSFARDMNQVDQPYLDGWLKDIRVEKEESNPDSNQVYLDGWL
KDTRVEEVRVNPDSNQVYLDGWLKDTRTEKDKSNLDSNQVYLDGWLKNTRTEKVKSSPDSNQVY
LDGWLKDIRDEKTKSTPNSNQVYVDGWLKDIRVEKAKVNSDSNQVYLDGWLKDTRAEKVKVNLD
SKQVYLDGWLKDTRTEKENSNPDSNQVYLDGWLKDTGAGKETSSPNSNRVYLDGWLKDNHIENE
KSITNSKQAYLDGWLKDSHAENHIKIGQDLVVSNEKPSSKVDHTEAFKVAFFGIEDLYVGNVMT
LQFPIREYAKFLPRKVADDIPFSKSQIPSLLQLFSLTKDSPKGEDMIDIINQCEFRPNKGETKA
CPTSLESMLEFVHSVIGAETNYNIHSTSYPTTSGAQLQNYTVLDISKDIYAPKWVACHPRPYPY
ALYYCHYLDIGSKIFKVLLKGEYGDIMDALGICHLDTSDMDPNHFIFELLGMKPGEGPLCHFFP
VKHVLWVPSPPHATK
Repeat found in LATHSAT_LOCUS22106
Repeat occurs 18 times in a sequence of 656 amino acids
Location between 685181907 and 685184362
Coverage of 41.16 %
Instances:
YLDGWLKDTPLQNQK | YLDGWLKDTRAEKEN | YLDGWLKDTRGEKEN | YLDGWLKDIRGEKEK | YLDGWLKDARAEKEK
YLDGWLKDNRAEKEK | YLDGWLKDTRAEKAK | YLDGWLKDTRAENAK | YLDGWLKDTQTEKAK | YLDGWLKDIRAEKSK
YLDGWLKDTRAEKAK | YLDGWLKDTRSEKLN | YLDGWLKDTRANNEK | YLDGWLKDIRDLKEK | YLDGWLKDTRAEKEN
YLDGWLKDSHVENEK | YLDGWLKDSHAENHM | YLDIGSKIFKVLLKG |
pattern: YLD[IG][WG][LS]K[DI][NIASFT][QHRKP][VDALSGT][LNEQ][LNK][AQSLHEK][NGMK]
MTHRIVMSLLPFLLLLLINDHGSFARDMNQVDQPYLDGWLKDTPLQNQKSSPNSNQVYLDGWL
KDTRAEKENSNQVYLDGWLKDTRGEKENSNQVYLDGWLKDIRGEKEKLNHDSNQVYLDGWLKDA
RAEKEKSNPDSNQVYLDGWLKDNRAEKEKVNFDSNQVYLDGWLKDTRAEKAKINPNSNQVYLDG
WLKDTRAENAKDAPDSNQVYLDGWLKDTQTEKAKTKTDSNQVYLDGWLKDIRAEKSKANPDSNQ
VYLDGWLKDTRAEKAKVNPDSNQVYLDGWLKDTRSEKLNVNPNSNQVYLDGWLKDTRANNEKSN
LNSNQVYLDGWLKDIRDLKEKSTIDSNQVYLDGWLKDTRAEKENSSPNSNQVYLDGWLKDSHVE
NEKSISNSKQAYLDGWLKDSHAENHMKIGHDLAESNENLSSKVDHTEAFKVAFFGIEDLYVGNV
MTLQFPIREYAKFLPRKVADDIPFSKSQIPSLLQLFSLTKDSTQGEDMIDIINQCEFRPNKGET
KACPTSLESMLEFVHSVIGAETNYDIHSTSYPTTSGAQLQNYTVMDISKDIYAPKWVACHPRPY
PYALYYCHYLDIGSKIFKVLLKGEYGDIMDALGICHLDTSDMDPNHFIFELLGMKPGEGPLCHF
FPVKHVLWVPRPPHTTK
Repeat found in LATHSAT_LOCUS22107
Repeat occurs 18 times in a sequence of 650 amino acids
Location between 685219158 and 685221593
Coverage of 27.69 %
Instances:
YLDGWLKNTP | YLDGWLKDTR | YLDGWLKDTR | YLDGWLKDIR | YLDGWLKDAR
YLDGWLKDNR | YLDGWLKDTR | YLDGWLKDTR | YLDGWLKDTQ | YLDGWLKDIR
YLDGWLKDTR | YLDGWLKDTR | YLDGWLKDTR | YLDGWLKDIR | YLDGWLKDTR
YLDGWLKDSH | YLDGWLKDSH | YLDIGSKIFK |
pattern: YLD[IG][WG][LS]K[DNI][NIASFT][QHRKP]
MSLLPFLLLFLINDHGSFARDMNQVDQPYLDGWLKNTPLKNQKSSPNSNQVYLDGWLKDTRAE
KENSNQVYLDGWLKDTRGEKQNSNQVYLDGWLKDIRGEKEKLNHDSNQVYLDGWLKDARAEKEK
SNPDSNQVYLDGWLKDNRAEKEKVNFDSNQVYLDGWLKDTRDEKAKVNPNSNQVYLDGWLKDTR
AENAKAAPDSNQVYLDGWLKDTQAEKAKTNTDTNQVYLDGWLKDIRAEKAKANPDSNQVYLDGW
LKDTRAEKAKVNPDSNQVYLDGWLKDTRSEKLNVNPNSNQVYLDGWLKDTRANNEKSNLNSNQV
YLDGWLKDIRDLKEKSTIDSNQVYLDGWLKDTRAEKENSSPNSNQVYLDGWLKDSHVENAKSIS
NSKQAYLDGWLKDSHAENHMKIGHDLAESNRNLSSKIDHTEAFKVAFFGIEDLYVGNVMTLQFP
IREYAKFLPRKVADDIPFSKSQIPSLLQLFSLTKDSTQGEDMIDIINQCEFRPNKGETKACPTS
LESMLEFVHSVIGAETNYDIHSTSYPTTSGAQLQNYTVMDISKDIYAPKWVACHPRPYPYALYY
CHYLDIGSKIFKVLLKGEYGDIMDALGICHLDTSDMDPNHFIFELLGMKPGEGPLCHFFPVKHV
LWVPRPPHATK
Repeat found in LATHSAT__2117
Repeat occurs 18 times in a sequence of 629 amino acids
Location between 685219703 and 685221593
Coverage of 28.62 %
Instances:
YLDGWLKNTP | YLDGWLKDTR | YLDGWLKDTR | YLDGWLKDIR | YLDGWLKDAR
YLDGWLKDNR | YLDGWLKDTR | YLDGWLKDTR | YLDGWLKDTQ | YLDGWLKDIR
YLDGWLKDTR | YLDGWLKDTR | YLDGWLKDTR | YLDGWLKDIR | YLDGWLKDTR
YLDGWLKDSH | YLDGWLKDSH | YLDIGSKIFK |
pattern: YLD[IG][WG][LS]K[DNI][NIASFT][QHRKP]
MNQVDQPYLDGWLKNTPLKNQKSSPNSNQVYLDGWLKDTRAEKENSNQVYLDGWLKDTRGEKQ
NSNQVYLDGWLKDIRGEKEKLNHDSNQVYLDGWLKDARAEKEKSNPDSNQVYLDGWLKDNRAEK
EKVNFDSNQVYLDGWLKDTRDEKAKVNPNSNQVYLDGWLKDTRAENAKAAPDSNQVYLDGWLKD
TQAEKAKTNTDTNQVYLDGWLKDIRAEKAKANPDSNQVYLDGWLKDTRAEKAKVNPDSNQVYLD
GWLKDTRSEKLNVNPNSNQVYLDGWLKDTRANNEKSNLNSNQVYLDGWLKDIRDLKEKSTIDSN
QVYLDGWLKDTRAEKENSSPNSNQVYLDGWLKDSHVENAKSISNSKQAYLDGWLKDSHAENHMK
IGHDLAESNRNLSSKIDHTEAFKVAFFGIEDLYVGNVMTLQFPIREYAKFLPRKVADDIPFSKS
QIPSLLQLFSLTKDSTQGEDMIDIINQCEFRPNKGETKACPTSLESMLEFVHSVIGAETNYDIH
STSYPTTSGAQLQNYTVMDISKDIYAPKWVACHPRPYPYALYYCHYLDIGSKIFKVLLKGEYGD
IMDALGICHLDTSDMDPNHFIFELLGMKPGEGPLCHFFPVKHVLWVPRPPHATK
Repeat found in LATHSAT_LOCUS22108
Repeat occurs 18 times in a sequence of 675 amino acids
Location between 685240480 and 685242992
Coverage of 26.67 %
Instances:
YLDGWLKNTP | YLDGWLKDTR | YLDGWLKDTR | YLDGWLKDIR | YLDGWLKDAR
YLDGWLKDTR | YLDGWLKNTR | YLDGWLKDTR | YLDGWLKDTQ | YLDGWLKDIR
YLDGWLKDTR | YLDGWLKDTR | YLDGWLKDTQ | YLDGWLKDIR | YLDGWLKDTQ
YLDGWLKDSH | YLDGWLKDSH | YLDIGSKIFK |
pattern: YLD[IG][WG][LS]K[DNI][IASFT][QHRKP]
MAHRIVMSILPFLLLLLINDHGSFARDMNQVDQPYLDGWLKNTPLKNQKSSHNSNQVYLDGWL
KDTRAEKENSNQVYLDGWLKDTRAEKENSNQVYVDGWLKDTRGEKENSNQVYLDGWLKDIRGEK
EKLNHDSNQVYLDGWLKDARGEKEKSNPDSNQVYLDGWLKDTRAEKEKVNPDSNQVYLDGWLKN
TRAEKAKANLNSNQVYLDGWLKDTRVENAKASPDSNQVYLDGWLKDTQVEKAKTNTDINQVYLD
GWLKDIRAEKAKANPDSNQVYLDGWLKDTRAEEAKVNPDSNQVYLDGWLKDTRSEKLNVNPNSN
QVYLDGWLKDTQANNEKSNINSNKVYLDGWLKDIRDLKEKSTIDSNQVYLDGWLKDTQAEKENS
SPDSNQVYLDGWLKDSHVENAKSISNSKQAYLDGWLKDSHAENHMKIRHDFAESNENLSSKVDH
TEAFKVAFFGIEDLYVGNVMTLQFPIREYAKFLPRKVADDIPFSKSQIPSLLQLFSLTKDSTQG
EDMIDIINQCEFRPNKGETKACPTSLESMLEFVHSVIGAETNYDIHSTSYPTTSGAQLQNYTVM
DISKDIYAPKWVACHPRPYPYALYYCHYLDIGSKIFKVLLKGEYGDTMDALGICHLDTSDMDPN
HFIFELLGMKPGEGPLCHFFPVKHVLWVPRPPHATK
Repeat found in LATHSAT_LOCUS22111
Repeat occurs 17 times in a sequence of 664 amino acids
Location between 685595708 and 685598192
Coverage of 33.28 %
Instances:
YLDGWLKNTQLKN | YLDGWLKDTRGEK | YLDGWLKDIRAEK | YLDGWLKDTRGEE | YLDGWLKDIRVEK
YLDGWLKDTRAEK | YLDGWLKDTRAEK | YLDGWLKDIRAEK | YLDGWLKDTRVEK | YLDGWLKDIRAEK
YLDGWLKDTRAEK | YLDGWLKDIRAEK | YLDGWLKDTRAEK | YLDGWLKDTQAEK | YLDGWLKDSHVEN
YLDGWLKDSHAEN | YLDIGSKIFKVLL |
pattern: YLD[IG][WG][LS]K[DNI][SFTI][KHRQ][LAVG][LEK][LNEK]
MAGRVVMSLLPFLLLLLINGHESFARDMNQVDQPYLDGWLKNTQLKNQKSSLNSEQVYLDGWL
KDTRGEKAKINPDSNQVYLDGWLKDIRAEKEKSNADSNQVYLDGWLKDTRGEEEKSNPDSNQVY
LDGWLKDIRVEKAQVNPNSNQVYLDGWLKDTRAEKVKVNHDPNQVYLDGWLKDTRAEKEKSNLD
SNQVYLDGWLKDIRAEKEKSTPDSNQVYLDGWLKDTRVEKVKSASDSNQVYVDGWLKDTRAEKG
KVNSDSNQVYLDGWLKDIRAEKVKANLDSNQVYLDGWLKDTRAEKANSNPDSNQAYLDGWLKDI
RAEKAKANLDSNQVYLDGWLKDTRAEKANSNPDSNQVYLDGWLKDTQAEKENSSPNSNQVYLDG
WLKDSHVENAKSISNSKQAYLDGWLKDSHAENPMKIGHDLAESNRNLSSKVDHTEAFKVAFFGI
EDLYVGNVMTLQFPIREYAKFLPRKVADDIPFSKSQIPSLLQLFSLTKDSPKGEDMIDIINQCE
FRPNKGETKACPTSLESMLEFVHSVIGAETNYDIHSTSYPTTSGAQLQNFTVMDISKDIYAPKW
VACHPRPYPYALYYCHYLDIGSKIFKVLLKGEYGDIMDALGICHLDTSDMDPNHFIFELLGMKP
GEGPLCHFFPVKHVLWVPRPPHATK
Repeat found in LATHSAT_LOCUS22112
Repeat occurs 15 times in a sequence of 618 amino acids
Location between 685625502 and 685627914
Coverage of 19.42 %
Instances:
YLDGWLKN | YLDGWLKD | YLDGWLKD | YLDGWLKD | YLDGWLKD
YLDGWLKD | YLDGWLKD | YLDGWLKD | YLDGWLKD | YLDGWLKD
YLDGWLKD | YLDGWLKD | YLDGWLKD | YLDGWLKD | YLDIGSKI

pattern: YLD[IG][WG][LS]K[DNI]
MARRVIMSLLPFLLLLFINGHESFARDMNQVRQPYLDGWLKNTPLKNQKSSPNSEQVYLDGWL
KDIRAEKEKSNADSNQVYLDGWLKDTRGEKEKSNPDSNQVYLDGWLKDIRAEKPQVNPDSNQVY
LDGWLKDTRAEKVKVNHDPNQVYLDGWLKDTRAEKEKSNLDSNKVYLDGWLKDIRAEKEKSTPD
SNQVYLDGWLKDTRVEKVKFAPDSNQVYLDGWLKDTRYENTKSNPESNQVYVDGWLKNTRAEKG
KVNSDSNQAYLDGWLKDIRAEKVKANLDSNQVYLDGWLKDIRAEKVNSNPDSNQVYLDGWLKDI
RAEKENSSPNSNQVYLDGWLKDSHVENAKSISNSKQAYLDGWLKDSHAENPMKIGHDLAESNRN
LSSKVDHTEAFKVAFFGIEDLYVGNVMTLQFPIREYAKFLPRKVADDIPFSKSQIPSLLQLFSL
TKDSTQGEDMIDIINQCEFRPNKGETKACPTSLESMLEFVHSVIGAETNYDIHSTSYPTTSGAQ
LQNYTVMDISKDIYAPKWVACHPRPYPYALYYCHYLDIGSKIFKVLLKGEYGDIMDALGICHLD
TSDMDPNHFIFELLGMKPGEGPLCHFFPVKHVLWVPRPPHATK

Similar gene clusters

OZ012739 - Cluster 34 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
OZ012739 - Gene Cluster 34. Type = cyclopeptide. Location: 683118055 - 688379374 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in LATHSAT_LOCUS22098
Repeat occurs 11 times in a sequence of 526 amino acids
Location between 683225548 and 683227667
Coverage of 20.91 %
Instances:
YLDGWLKDIR | YLDGWLKDTR | YLDGWLKDTR | YLDGWLKNTR | YLDGWLKDIR
YLDGWLKDTR | YLDGWLKDTR | YLDGWLKDTG | YLDGWLKDNH | YLDGWLKDSH
YLDIGSKIFK |
pattern: YLD[IG][WG][LS]K[DNI][NISFT][KHRG]
MARRVVLSVLPFLLLLLINDYGSFARDMNQVDQPYLDGWLKDIRVEKEESNPDSNQVYLDGWL
KDTRVEEVRVNPDSNQVYLDGWLKDTRTEKDKSNLDSNQVYLDGWLKNTRTEKVKSSPDSNQVY
LDGWLKDIRDEKTKSTPNSNQVYVDGWLKDIRVEKAKVNSDSNQVYLDGWLKDTRAEKVKVNLD
SKQVYLDGWLKDTRTEKENSNPDSNQVYLDGWLKDTGAGKETSSPNSNRVYLDGWLKDNHIENE
KSITNSKQAYLDGWLKDSHAENHIKIGQDLVVSNEKPSSKVDHTEAFKVAFFGIEDLYVGNVMT
LQFPIREYAKFLPRKVADDIPFSKSQIPSLLQLFSLTKDSPKGEDMIDIINQCEFRPNKGETKA
CPTSLESMLEFVHSVIGAETNYNIHSTSYPTTSGAQLQNYTVLDISKDIYAPKWVACHPRPYPY
ALYYCHYLDIGSKIFKVLLKGEYGDIMDALGICHLDTSDMDPNHFIFELLGMKPGEGPLCHFFP
VKHVLWVPSPPHATK
Repeat found in LATHSAT_LOCUS22106
Repeat occurs 18 times in a sequence of 656 amino acids
Location between 685181907 and 685184362
Coverage of 41.16 %
Instances:
YLDGWLKDTPLQNQK | YLDGWLKDTRAEKEN | YLDGWLKDTRGEKEN | YLDGWLKDIRGEKEK | YLDGWLKDARAEKEK
YLDGWLKDNRAEKEK | YLDGWLKDTRAEKAK | YLDGWLKDTRAENAK | YLDGWLKDTQTEKAK | YLDGWLKDIRAEKSK
YLDGWLKDTRAEKAK | YLDGWLKDTRSEKLN | YLDGWLKDTRANNEK | YLDGWLKDIRDLKEK | YLDGWLKDTRAEKEN
YLDGWLKDSHVENEK | YLDGWLKDSHAENHM | YLDIGSKIFKVLLKG |
pattern: YLD[IG][WG][LS]K[DI][NIASFT][QHRKP][VDALSGT][LNEQ][LNK][AQSLHEK][NGMK]
MTHRIVMSLLPFLLLLLINDHGSFARDMNQVDQPYLDGWLKDTPLQNQKSSPNSNQVYLDGWL
KDTRAEKENSNQVYLDGWLKDTRGEKENSNQVYLDGWLKDIRGEKEKLNHDSNQVYLDGWLKDA
RAEKEKSNPDSNQVYLDGWLKDNRAEKEKVNFDSNQVYLDGWLKDTRAEKAKINPNSNQVYLDG
WLKDTRAENAKDAPDSNQVYLDGWLKDTQTEKAKTKTDSNQVYLDGWLKDIRAEKSKANPDSNQ
VYLDGWLKDTRAEKAKVNPDSNQVYLDGWLKDTRSEKLNVNPNSNQVYLDGWLKDTRANNEKSN
LNSNQVYLDGWLKDIRDLKEKSTIDSNQVYLDGWLKDTRAEKENSSPNSNQVYLDGWLKDSHVE
NEKSISNSKQAYLDGWLKDSHAENHMKIGHDLAESNENLSSKVDHTEAFKVAFFGIEDLYVGNV
MTLQFPIREYAKFLPRKVADDIPFSKSQIPSLLQLFSLTKDSTQGEDMIDIINQCEFRPNKGET
KACPTSLESMLEFVHSVIGAETNYDIHSTSYPTTSGAQLQNYTVMDISKDIYAPKWVACHPRPY
PYALYYCHYLDIGSKIFKVLLKGEYGDIMDALGICHLDTSDMDPNHFIFELLGMKPGEGPLCHF
FPVKHVLWVPRPPHTTK
Repeat found in LATHSAT_LOCUS22107
Repeat occurs 18 times in a sequence of 650 amino acids
Location between 685219158 and 685221593
Coverage of 27.69 %
Instances:
YLDGWLKNTP | YLDGWLKDTR | YLDGWLKDTR | YLDGWLKDIR | YLDGWLKDAR
YLDGWLKDNR | YLDGWLKDTR | YLDGWLKDTR | YLDGWLKDTQ | YLDGWLKDIR
YLDGWLKDTR | YLDGWLKDTR | YLDGWLKDTR | YLDGWLKDIR | YLDGWLKDTR
YLDGWLKDSH | YLDGWLKDSH | YLDIGSKIFK |
pattern: YLD[IG][WG][LS]K[DNI][NIASFT][QHRKP]
MSLLPFLLLFLINDHGSFARDMNQVDQPYLDGWLKNTPLKNQKSSPNSNQVYLDGWLKDTRAE
KENSNQVYLDGWLKDTRGEKQNSNQVYLDGWLKDIRGEKEKLNHDSNQVYLDGWLKDARAEKEK
SNPDSNQVYLDGWLKDNRAEKEKVNFDSNQVYLDGWLKDTRDEKAKVNPNSNQVYLDGWLKDTR
AENAKAAPDSNQVYLDGWLKDTQAEKAKTNTDTNQVYLDGWLKDIRAEKAKANPDSNQVYLDGW
LKDTRAEKAKVNPDSNQVYLDGWLKDTRSEKLNVNPNSNQVYLDGWLKDTRANNEKSNLNSNQV
YLDGWLKDIRDLKEKSTIDSNQVYLDGWLKDTRAEKENSSPNSNQVYLDGWLKDSHVENAKSIS
NSKQAYLDGWLKDSHAENHMKIGHDLAESNRNLSSKIDHTEAFKVAFFGIEDLYVGNVMTLQFP
IREYAKFLPRKVADDIPFSKSQIPSLLQLFSLTKDSTQGEDMIDIINQCEFRPNKGETKACPTS
LESMLEFVHSVIGAETNYDIHSTSYPTTSGAQLQNYTVMDISKDIYAPKWVACHPRPYPYALYY
CHYLDIGSKIFKVLLKGEYGDIMDALGICHLDTSDMDPNHFIFELLGMKPGEGPLCHFFPVKHV
LWVPRPPHATK
Repeat found in LATHSAT__2117
Repeat occurs 18 times in a sequence of 629 amino acids
Location between 685219703 and 685221593
Coverage of 28.62 %
Instances:
YLDGWLKNTP | YLDGWLKDTR | YLDGWLKDTR | YLDGWLKDIR | YLDGWLKDAR
YLDGWLKDNR | YLDGWLKDTR | YLDGWLKDTR | YLDGWLKDTQ | YLDGWLKDIR
YLDGWLKDTR | YLDGWLKDTR | YLDGWLKDTR | YLDGWLKDIR | YLDGWLKDTR
YLDGWLKDSH | YLDGWLKDSH | YLDIGSKIFK |
pattern: YLD[IG][WG][LS]K[DNI][NIASFT][QHRKP]
MNQVDQPYLDGWLKNTPLKNQKSSPNSNQVYLDGWLKDTRAEKENSNQVYLDGWLKDTRGEKQ
NSNQVYLDGWLKDIRGEKEKLNHDSNQVYLDGWLKDARAEKEKSNPDSNQVYLDGWLKDNRAEK
EKVNFDSNQVYLDGWLKDTRDEKAKVNPNSNQVYLDGWLKDTRAENAKAAPDSNQVYLDGWLKD
TQAEKAKTNTDTNQVYLDGWLKDIRAEKAKANPDSNQVYLDGWLKDTRAEKAKVNPDSNQVYLD
GWLKDTRSEKLNVNPNSNQVYLDGWLKDTRANNEKSNLNSNQVYLDGWLKDIRDLKEKSTIDSN
QVYLDGWLKDTRAEKENSSPNSNQVYLDGWLKDSHVENAKSISNSKQAYLDGWLKDSHAENHMK
IGHDLAESNRNLSSKIDHTEAFKVAFFGIEDLYVGNVMTLQFPIREYAKFLPRKVADDIPFSKS
QIPSLLQLFSLTKDSTQGEDMIDIINQCEFRPNKGETKACPTSLESMLEFVHSVIGAETNYDIH
STSYPTTSGAQLQNYTVMDISKDIYAPKWVACHPRPYPYALYYCHYLDIGSKIFKVLLKGEYGD
IMDALGICHLDTSDMDPNHFIFELLGMKPGEGPLCHFFPVKHVLWVPRPPHATK
Repeat found in LATHSAT_LOCUS22108
Repeat occurs 18 times in a sequence of 675 amino acids
Location between 685240480 and 685242992
Coverage of 26.67 %
Instances:
YLDGWLKNTP | YLDGWLKDTR | YLDGWLKDTR | YLDGWLKDIR | YLDGWLKDAR
YLDGWLKDTR | YLDGWLKNTR | YLDGWLKDTR | YLDGWLKDTQ | YLDGWLKDIR
YLDGWLKDTR | YLDGWLKDTR | YLDGWLKDTQ | YLDGWLKDIR | YLDGWLKDTQ
YLDGWLKDSH | YLDGWLKDSH | YLDIGSKIFK |
pattern: YLD[IG][WG][LS]K[DNI][IASFT][QHRKP]
MAHRIVMSILPFLLLLLINDHGSFARDMNQVDQPYLDGWLKNTPLKNQKSSHNSNQVYLDGWL
KDTRAEKENSNQVYLDGWLKDTRAEKENSNQVYVDGWLKDTRGEKENSNQVYLDGWLKDIRGEK
EKLNHDSNQVYLDGWLKDARGEKEKSNPDSNQVYLDGWLKDTRAEKEKVNPDSNQVYLDGWLKN
TRAEKAKANLNSNQVYLDGWLKDTRVENAKASPDSNQVYLDGWLKDTQVEKAKTNTDINQVYLD
GWLKDIRAEKAKANPDSNQVYLDGWLKDTRAEEAKVNPDSNQVYLDGWLKDTRSEKLNVNPNSN
QVYLDGWLKDTQANNEKSNINSNKVYLDGWLKDIRDLKEKSTIDSNQVYLDGWLKDTQAEKENS
SPDSNQVYLDGWLKDSHVENAKSISNSKQAYLDGWLKDSHAENHMKIRHDFAESNENLSSKVDH
TEAFKVAFFGIEDLYVGNVMTLQFPIREYAKFLPRKVADDIPFSKSQIPSLLQLFSLTKDSTQG
EDMIDIINQCEFRPNKGETKACPTSLESMLEFVHSVIGAETNYDIHSTSYPTTSGAQLQNYTVM
DISKDIYAPKWVACHPRPYPYALYYCHYLDIGSKIFKVLLKGEYGDTMDALGICHLDTSDMDPN
HFIFELLGMKPGEGPLCHFFPVKHVLWVPRPPHATK
Repeat found in LATHSAT_LOCUS22111
Repeat occurs 17 times in a sequence of 664 amino acids
Location between 685595708 and 685598192
Coverage of 33.28 %
Instances:
YLDGWLKNTQLKN | YLDGWLKDTRGEK | YLDGWLKDIRAEK | YLDGWLKDTRGEE | YLDGWLKDIRVEK
YLDGWLKDTRAEK | YLDGWLKDTRAEK | YLDGWLKDIRAEK | YLDGWLKDTRVEK | YLDGWLKDIRAEK
YLDGWLKDTRAEK | YLDGWLKDIRAEK | YLDGWLKDTRAEK | YLDGWLKDTQAEK | YLDGWLKDSHVEN
YLDGWLKDSHAEN | YLDIGSKIFKVLL |
pattern: YLD[IG][WG][LS]K[DNI][SFTI][KHRQ][LAVG][LEK][LNEK]
MAGRVVMSLLPFLLLLLINGHESFARDMNQVDQPYLDGWLKNTQLKNQKSSLNSEQVYLDGWL
KDTRGEKAKINPDSNQVYLDGWLKDIRAEKEKSNADSNQVYLDGWLKDTRGEEEKSNPDSNQVY
LDGWLKDIRVEKAQVNPNSNQVYLDGWLKDTRAEKVKVNHDPNQVYLDGWLKDTRAEKEKSNLD
SNQVYLDGWLKDIRAEKEKSTPDSNQVYLDGWLKDTRVEKVKSASDSNQVYVDGWLKDTRAEKG
KVNSDSNQVYLDGWLKDIRAEKVKANLDSNQVYLDGWLKDTRAEKANSNPDSNQAYLDGWLKDI
RAEKAKANLDSNQVYLDGWLKDTRAEKANSNPDSNQVYLDGWLKDTQAEKENSSPNSNQVYLDG
WLKDSHVENAKSISNSKQAYLDGWLKDSHAENPMKIGHDLAESNRNLSSKVDHTEAFKVAFFGI
EDLYVGNVMTLQFPIREYAKFLPRKVADDIPFSKSQIPSLLQLFSLTKDSPKGEDMIDIINQCE
FRPNKGETKACPTSLESMLEFVHSVIGAETNYDIHSTSYPTTSGAQLQNFTVMDISKDIYAPKW
VACHPRPYPYALYYCHYLDIGSKIFKVLLKGEYGDIMDALGICHLDTSDMDPNHFIFELLGMKP
GEGPLCHFFPVKHVLWVPRPPHATK
Repeat found in LATHSAT_LOCUS22112
Repeat occurs 15 times in a sequence of 618 amino acids
Location between 685625502 and 685627914
Coverage of 19.42 %
Instances:
YLDGWLKN | YLDGWLKD | YLDGWLKD | YLDGWLKD | YLDGWLKD
YLDGWLKD | YLDGWLKD | YLDGWLKD | YLDGWLKD | YLDGWLKD
YLDGWLKD | YLDGWLKD | YLDGWLKD | YLDGWLKD | YLDIGSKI

pattern: YLD[IG][WG][LS]K[DNI]
MARRVIMSLLPFLLLLFINGHESFARDMNQVRQPYLDGWLKNTPLKNQKSSPNSEQVYLDGWL
KDIRAEKEKSNADSNQVYLDGWLKDTRGEKEKSNPDSNQVYLDGWLKDIRAEKPQVNPDSNQVY
LDGWLKDTRAEKVKVNHDPNQVYLDGWLKDTRAEKEKSNLDSNKVYLDGWLKDIRAEKEKSTPD
SNQVYLDGWLKDTRVEKVKFAPDSNQVYLDGWLKDTRYENTKSNPESNQVYVDGWLKNTRAEKG
KVNSDSNQAYLDGWLKDIRAEKVKANLDSNQVYLDGWLKDIRAEKVNSNPDSNQVYLDGWLKDI
RAEKENSSPNSNQVYLDGWLKDSHVENAKSISNSKQAYLDGWLKDSHAENPMKIGHDLAESNRN
LSSKVDHTEAFKVAFFGIEDLYVGNVMTLQFPIREYAKFLPRKVADDIPFSKSQIPSLLQLFSL
TKDSTQGEDMIDIINQCEFRPNKGETKACPTSLESMLEFVHSVIGAETNYDIHSTSYPTTSGAQ
LQNYTVMDISKDIYAPKWVACHPRPYPYALYYCHYLDIGSKIFKVLLKGEYGDIMDALGICHLD
TSDMDPNHFIFELLGMKPGEGPLCHFFPVKHVLWVPRPPHATK
Repeat found in LATHSAT_LOCUS22117
Repeat occurs 11 times in a sequence of 357 amino acids
Location between 686262239 and 686265326
Coverage of 33.89 %
Instances:
FEPIPNISAYG | FEPRPNISAYG | FEPRPNISAYG | FEPRPNISAYG | FEPRPNISAYG
FEPRPNISAYG | FEPRPNISAYG | FEPRPNISAYG | FEPRPNISAYG | FEPRPNISAYG
FEPRPNISAYG |
pattern: FEP[RI]PNISAYG
The following known motifs were found:
FEPR was found 10 times in this sequence
MIRLRPAFALLPLFLLLIVGIVESRKDLGEYWKLVMKQQDMPEVIQGLLDENTKKNFKTLKHS
FDDREKKKVVKDFEPIPNISAYGENDIDVKKKKRAIKDFEPRPNISAYGPNISAYGKNDIDVKQ
KKGVNEDFEPRPNISAYGPNISAYGRKNIDVKEKNRAIDDFEPRPNISAYGPNISAYGENDIDV
KEKKGEIEDFEPRPNISAYGPNISAYGGNDIDVKEKKGAIEDFEPRPNISAYGPNISAYGENDI
DVKEKKGEIEDFEPRPNISAYGPNISAYGGNNIDVKEKNGAIEDFEPRPNISAYGPNISAYGEN
DIDVKGKKGEIEVFEPRPNISAYGPNISAYGGINIDVKEKKRVIDDFEPRPNISAYGPNISAYG
KNDIEVKEKKGEIEDFEPRPNISAYGNNEIDGEIKGF
Repeat found in LATHSAT_LOCUS22119
Repeat occurs 5 times in a sequence of 179 amino acids
Location between 686456054 and 686456594
Coverage of 33.52 %
Instances:
FEPRPNVSAYGE | FEPRPNISAYGD | FEPRPNISAYGN | FEPRPNISAYDN | FEPRPSVTKYNA

pattern: FEPRP[SN][VI][ST][AK]Y[DNG][DNAE]
The following known motifs were found:
FEPR was found 5 times in this sequence
MSLPCFAIKIVAIVESRKDVGEYWKLAMKDQDMPEEIQGLLDANIEKNFKTLKQSFDAKENNK
AVKDFEPRPNVSAYGEPNVSAYGENDINTTENKGANEEFEPRPNISAYGDPNISAYGDNNIDDE
KKKKSTEDFEPRPNISAYGNPNISAYGNNDIDDRKKNKVVENFEPRPNISAYDNPNISAYDNNE
IGAEFTEDFEPRPSVTKYNA

Similar gene clusters

OZ012740 - Cluster 35 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
OZ012740 - Gene Cluster 35. Type = cyclopeptide. Location: 1 - 1300652 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

No repeats detected in this cluster.

Similar gene clusters

OZ012740 - Cluster 36 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
OZ012740 - Gene Cluster 36. Type = cyclopeptide. Location: 24365987 - 26899208 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in LATHSAT_LOCUS22917
Repeat occurs 14 times in a sequence of 618 amino acids
Location between 25492975 and 25495095
Coverage of 33.98 %
Instances:
ESPNPLFYHRYATKE | ESPNPLFYHRYAAEE | ESPNPLFYHRYAAKD | ESPNPFFYHRYAAKE | ESPNPLFYHRYAAKD
ESPNPLFYHRYAAKE | ESPLHPFFYHRYAAK | ESPNPLFYHRYAARE | ESPNPLFYHRYAAKE | ESPNPLFYHRYAAKE
ESPNPLFYHRYAAKE | ESPNPLFYHRYAAKD | ESPNPLFYHRYAAKE | ESPNPLFYRSYAGSE |
pattern: ESP[LN][HP][LFP]F[FY][HRY][SHR][RY][AY][ATG][ASREK][DEK]
The following known motifs were found:
.L.Y..Y was found 13 times in this sequence
MKFHFFHIITFFMVVILATNAETLPPQLYWKFILPNTPMPKAITNLLTNSPMPKIITNLQLPG
VDDASKKGYDDGGAADVKSEESPNPLFYHRYATKEATKENDVKSEESPNPLFYHRYAAEEAAEE
NDEKSEESPNPLFYHRYAAKDAAKDTDVKSEESPNPFFYHRYAAKEADVKSEESPNPLFYHRYA
AKDAAKDTDVKSKESPNPLFYHRYAAKEAAKEADVKSEESPLHPFFYHRYAAKENDVKSEESPN
PLFYHRYAAREAARETGVKPEESRNPLFYHRYVAKETDDNSKESPNPLFYHRYAAKEAAKETGV
KSEESPNPLFYHRYAAKEAAKETDVNSEESPNPLFYHRYAAKEAAKETDVNSEESPNPLFYHRY
AAKDAAKDNGAKSEESPNPLFYHRYAAKEAAKETDAKSEESPNPLFYRSYAGSETQLHAKPNAT
IFFFEKDLFHGKKLFVKFVRTTSNNEEIFLPREIANSIPFSSNKMEYILNKLNIEKGSKGARIV
KNTISDCEMEGVKGEEKLCVTSLESMIDFITSKLGKNVEAFSTEINKESVFQHYTIAEGVKKLG
DKNKVAVCHKVSYPYVVFYCHETNTTKAYSVPLEGADGSRVKAIAVCHTDTSEWNPNHLAFQVL
KVKPGTVPVCHLLPQDHVIWISK
Repeat found in LATHSAT_LOCUS22918
Repeat occurs 14 times in a sequence of 618 amino acids
Location between 25515961 and 25518081
Coverage of 33.98 %
Instances:
ESPNPLFYHRYATKE | ESPNPLFYHRYAAEE | ESPNPLFYHRYAAKD | ESPNPFFYHRYAAKE | ESPNPLFYHRYAAKD
ESPNPLFYHRYAAKE | ESPLHPFFYHRYAAK | ESPNPLFYHRYAARE | ESPNPLFYHRYAAKE | ESPNPLFYHRYAAKE
ESPNPLFYHRYAAKE | ESPNPLFYHRYAAKD | ESPNPLFYHRYAAKE | ESPNPLFYRSYAGSE |
pattern: ESP[LN][HP][LFP]F[FY][HRY][SHR][RY][AY][ATG][ASREK][DEK]
The following known motifs were found:
.L.Y..Y was found 13 times in this sequence
MKFHFFHIITFFMVVILATNAETLPPQLYWKFILPNTPMPKAITNLLTNSPMPKIITNLQLPG
VDDASKKGYDDGGAADVKSEESPNPLFYHRYATKEATKENDVKSEESPNPLFYHRYAAEEAAEE
NDEKSEESPNPLFYHRYAAKDAAKDTDVKSEESPNPFFYHRYAAKEADVKSEESPNPLFYHRYA
AKDAAKDTDVKSKESPNPLFYHRYAAKEAAKEADVKSEESPLHPFFYHRYAAKENDVKSEESPN
PLFYHRYAAREAARETGVKPEESRNPLFYHRYVAKETDDNSKESPNPLFYHRYAAKEAAKETGV
KSEESPNPLFYHRYAAKEAAKETDVNSEESPNPLFYHRYAAKEAAKETDVNSEESPNPLFYHRY
AAKDAAKDNGAKSEESPNPLFYHRYAAKEAAKETDAKSEESPNPLFYRSYAGSETQLHAKPNAT
IFFFEKDLFHGKKLFVKFVRTTSNNEEIFLPREIANSIPFSSNKMEYILNKLNIEKGSKGARIV
KNTISDCEMEGVKGEEKLCVTSLESMIDFITSKLGKNVEAFSTEINKESVFQHYTIAEGVKKLG
DKNKVAVCHKVSYPYVVFYCHETNTTKAYSVPLEGADGSRVKAIAVCHTDTSEWNPNHLAFQVL
KVKPGTVPVCHLLPQDHVIWISK

Similar gene clusters

OZ012740 - Cluster 37 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
OZ012740 - Gene Cluster 37. Type = cyclopeptide. Location: 32601651 - 35406188 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Similar gene clusters

OZ012740 - Cluster 38 - Saccharide

Gene cluster description

Download cluster GenBank file
OZ012740 - Gene Cluster 38. Type = saccharide. Location: 501665321 - 501800468 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012740 - Cluster 39 - Alkaloid

Gene cluster description

Download cluster GenBank file
OZ012740 - Gene Cluster 39. Type = alkaloid. Location: 633089516 - 633365220 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012740 - Cluster 40 - Saccharide

Gene cluster description

Download cluster GenBank file
OZ012740 - Gene Cluster 40. Type = saccharide. Location: 644935913 - 646227241 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012741 - Cluster 41 - Putative

Gene cluster description

Download cluster GenBank file
OZ012741 - Gene Cluster 41. Type = putative. Location: 1757944 - 2128249 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012741 - Cluster 42 - Saccharide

Gene cluster description

Download cluster GenBank file
OZ012741 - Gene Cluster 42. Type = saccharide. Location: 333431353 - 335707975 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012741 - Cluster 43 - Lignan

Gene cluster description

Download cluster GenBank file
OZ012741 - Gene Cluster 43. Type = lignan. Location: 378821848 - 379729129 nt. Click on genes for more information.
Show pHMM detection rules used
plants/lignan: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Dirigent]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012741 - Cluster 44 - Lignan

Gene cluster description

Download cluster GenBank file
OZ012741 - Gene Cluster 44. Type = lignan. Location: 384992704 - 385711656 nt. Click on genes for more information.
Show pHMM detection rules used
plants/lignan: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Dirigent]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012741 - Cluster 45 - Fatty_acid-polyketide

Gene cluster description

Download cluster GenBank file
OZ012741 - Gene Cluster 45. Type = fatty_acid-polyketide. Location: 462955932 - 466383117 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012741 - Cluster 46 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
OZ012741 - Gene Cluster 46. Type = cyclopeptide. Location: 479675752 - 486169625 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in LATHSAT_LOCUS28674
Repeat occurs 10 times in a sequence of 576 amino acids
Location between 482964988 and 482967236
Coverage of 26.04 %
Instances:
KKPNSYYEVNTRDPN | KKPNHDYEVNTRDPN | KKPNYNYEVNTRDPN | KKPNYNYEVNTRDPN | KKPNYDYEVNTRDPN
KKPNYDYEVNTRDPN | KKPNYDYEVNTRDPN | KKPNYDYEVNTRDPN | KKPNYDYEVYPNSWS | KKPQYNYKVKTHDPS

pattern: KKP[NQ][SHY][DNY]Y[EK]V[NKY][TP][NHR][DS][WP][SN]
MAPTLAFHFLSLVLFFVTMGEGIIVEDLKIELPDQKDIEETKQSNHLHHSIDKAKQPDYDYKV
NIHDHNSWLPWSSRETKKPNSYYEVNTRDPNPWHPWGNRETKKPNHDYEVNTRDPNSWSPWGSR
ESKKPNYNYEVNTRDPNSWSPWGSRESKKPNYNYEVNTRDPNSWSPWGSRESKKPNYDYEVNTR
DPNSWSPWGSRESKKPNYDYEVNTRDPNSWSPWGSRESKKPNYDYEVNTRDPNSWSPWGSRETK
KPNYDYEVNTRDPNSWSPWGSRETKKPNYDYEVYPNSWSPWGSRKTKKSNYDYEVNTRDPNPWR
PWGSRESKKPQYNYKVKTHDPSPDHTEAFEKGFFNLEDLHVGNVMTLQFSHQEIPHFFSRKEEA
DSIPFSVSQLSSVLQLFSIPEDSLEAKIMKGTLEHCQEETVIGETKICANSVESMFEFVDKIIG
SENKQNILRTSYPSPTAAPLQKYTILKVSHDIDAPKWVSCHPIPYPYAIYYCHTMATGTKVFKV
TLVGDKNGDKMEALGMCHLDTADWDPNHMIFRTLRVKPGKNTPVCHFFSINHLLWVPLPNSKVN
I
Repeat found in LATHSAT_LOCUS28678
Repeat occurs 10 times in a sequence of 568 amino acids
Location between 483885437 and 483887483
Coverage of 22.89 %
Instances:
YITGYRTHAQDSN | YITGYRTHAQDSN | YITGYRTHAQDSN | YITGYRTHAQDSN | YITGYRNHAQDSN
YITNYRTQSHNSN | YITNYDNHELNQP | YITGYRTHAHESN | YITSYGKHESNQP | YITQYRPPSLNLK

pattern: YIT[SNQG]Y[DRG][NTKP][HQP][SAE][LHSQ][DNE][SLQ][NKP]
MAHTLPLQFLTVLIFFIMNGQVITARDLKAVLRDHKQGDSDEESYIAGYRTRIHGSNEPYLTS
YGNHETKKFDYITGYRTHAQDSNEPYLTGYANHDIKKSDYITGYRTHAQDSNEPYLTSYGNHDA
KKSDYITGYRTHAQDSNELYLTGYANHDDKKIDYITGYRTHAQDSNEPYQTSYSNHAAKKSDYI
TGYRNHAQDSNKPYLNGYGNHDAMKSDYIAGYRTHAQDSNEPYLTDYSNHEVKQPNYITNYRTQ
SHNSNKPYITNYDNHELNQPDYITGYRTHAHESNGPYITSYGKHESNQPYITQYRPPSLNLKGL
TSLNSKDIEGHASPNMDRTEAFKTGFFNLDDIHVGNVMTLQFPVQEVSPYLPKKEADSIPLSKS
QLPSVLQLFSISEDSTQAKSMRGTLEECEGETITGETKICANSLESMLEFVDTIIGSNTKHNIL
STSKPSPTATHLQKYTILEVSHDIHAPKWVACHPLPYPYAIYYCHYISTGTKVFKVMLVGDDNG
DKMEALGICHLDTSDWNPDHVVFRQLGIKAGKNTPVCHFFPVNHLLWVPVEPTKATV
Repeat found in LATHSAT_LOCUS28679
Repeat occurs 10 times in a sequence of 539 amino acids
Location between 483976157 and 483978061
Coverage of 14.84 %
Instances:
YITGYRIH | YITGYTTH | YITRYRNH | YITGYRTH | YITGYRTH
YITNYRTQ | YITNYDNH | YITGYRTH | YITSYGKH | YITQYRPT

pattern: YIT[NQSRG]Y[DRTG][NIKTP][HTQ]
MAHTLPLQFLIVLIFFIMNGQGITARDLKAVLRDHKQVDSNEESYIAGYRTRIHGSNEPYLTS
YANHDTKKSHYITGYRIHAQDSNEPYLTGYTNQDAKKTDYITGYTTHTQDSNEPCLTSYSNHAT
KKSDYITRYRNHAHDSNKPYLNGYGNHDAMKSDYITGYRTHAHDSNKPYLTNYANHDAMKSDYI
TGYRTHAQGSNEPYLTDSSNHEVKQPDYITNYRTQSHDSNKPYITNYDNHELNQPDYITGYRTH
AHESNGPYITSYGKHETNQPYITQYRPTSLNLKRLASLNSKDLEGHASPNMDRIEAFKTGYFNL
DDIHVGNVMTLQFPVQEVSPYLPKKEADSIPLSKSQLPSVLQLFSISEDSTQAKSMRGTLEECE
GETTTGETKICANSLESMLEFVDTIIGSNTKHNILSTSKPSPTATPLQKYTILEVSHDIHAPKW
VACHPLPYPYAIYYCHYISTGIKVFKVMLVGDDNGDKMEALGICHLDTSDWNPDHVVFRQLGIK
AGKNTPVCHFFPINHLLWVPVEPTKPTI

Similar gene clusters

OZ012741 - Cluster 47 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
OZ012741 - Gene Cluster 47. Type = cyclopeptide. Location: 481038660 - 486824839 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in LATHSAT_LOCUS28674
Repeat occurs 10 times in a sequence of 576 amino acids
Location between 482964988 and 482967236
Coverage of 26.04 %
Instances:
KKPNSYYEVNTRDPN | KKPNHDYEVNTRDPN | KKPNYNYEVNTRDPN | KKPNYNYEVNTRDPN | KKPNYDYEVNTRDPN
KKPNYDYEVNTRDPN | KKPNYDYEVNTRDPN | KKPNYDYEVNTRDPN | KKPNYDYEVYPNSWS | KKPQYNYKVKTHDPS

pattern: KKP[NQ][SHY][DNY]Y[EK]V[NKY][TP][NHR][DS][WP][SN]
MAPTLAFHFLSLVLFFVTMGEGIIVEDLKIELPDQKDIEETKQSNHLHHSIDKAKQPDYDYKV
NIHDHNSWLPWSSRETKKPNSYYEVNTRDPNPWHPWGNRETKKPNHDYEVNTRDPNSWSPWGSR
ESKKPNYNYEVNTRDPNSWSPWGSRESKKPNYNYEVNTRDPNSWSPWGSRESKKPNYDYEVNTR
DPNSWSPWGSRESKKPNYDYEVNTRDPNSWSPWGSRESKKPNYDYEVNTRDPNSWSPWGSRETK
KPNYDYEVNTRDPNSWSPWGSRETKKPNYDYEVYPNSWSPWGSRKTKKSNYDYEVNTRDPNPWR
PWGSRESKKPQYNYKVKTHDPSPDHTEAFEKGFFNLEDLHVGNVMTLQFSHQEIPHFFSRKEEA
DSIPFSVSQLSSVLQLFSIPEDSLEAKIMKGTLEHCQEETVIGETKICANSVESMFEFVDKIIG
SENKQNILRTSYPSPTAAPLQKYTILKVSHDIDAPKWVSCHPIPYPYAIYYCHTMATGTKVFKV
TLVGDKNGDKMEALGMCHLDTADWDPNHMIFRTLRVKPGKNTPVCHFFSINHLLWVPLPNSKVN
I
Repeat found in LATHSAT_LOCUS28678
Repeat occurs 10 times in a sequence of 568 amino acids
Location between 483885437 and 483887483
Coverage of 22.89 %
Instances:
YITGYRTHAQDSN | YITGYRTHAQDSN | YITGYRTHAQDSN | YITGYRTHAQDSN | YITGYRNHAQDSN
YITNYRTQSHNSN | YITNYDNHELNQP | YITGYRTHAHESN | YITSYGKHESNQP | YITQYRPPSLNLK

pattern: YIT[SNQG]Y[DRG][NTKP][HQP][SAE][LHSQ][DNE][SLQ][NKP]
MAHTLPLQFLTVLIFFIMNGQVITARDLKAVLRDHKQGDSDEESYIAGYRTRIHGSNEPYLTS
YGNHETKKFDYITGYRTHAQDSNEPYLTGYANHDIKKSDYITGYRTHAQDSNEPYLTSYGNHDA
KKSDYITGYRTHAQDSNELYLTGYANHDDKKIDYITGYRTHAQDSNEPYQTSYSNHAAKKSDYI
TGYRNHAQDSNKPYLNGYGNHDAMKSDYIAGYRTHAQDSNEPYLTDYSNHEVKQPNYITNYRTQ
SHNSNKPYITNYDNHELNQPDYITGYRTHAHESNGPYITSYGKHESNQPYITQYRPPSLNLKGL
TSLNSKDIEGHASPNMDRTEAFKTGFFNLDDIHVGNVMTLQFPVQEVSPYLPKKEADSIPLSKS
QLPSVLQLFSISEDSTQAKSMRGTLEECEGETITGETKICANSLESMLEFVDTIIGSNTKHNIL
STSKPSPTATHLQKYTILEVSHDIHAPKWVACHPLPYPYAIYYCHYISTGTKVFKVMLVGDDNG
DKMEALGICHLDTSDWNPDHVVFRQLGIKAGKNTPVCHFFPVNHLLWVPVEPTKATV
Repeat found in LATHSAT_LOCUS28679
Repeat occurs 10 times in a sequence of 539 amino acids
Location between 483976157 and 483978061
Coverage of 14.84 %
Instances:
YITGYRIH | YITGYTTH | YITRYRNH | YITGYRTH | YITGYRTH
YITNYRTQ | YITNYDNH | YITGYRTH | YITSYGKH | YITQYRPT

pattern: YIT[NQSRG]Y[DRTG][NIKTP][HTQ]
MAHTLPLQFLIVLIFFIMNGQGITARDLKAVLRDHKQVDSNEESYIAGYRTRIHGSNEPYLTS
YANHDTKKSHYITGYRIHAQDSNEPYLTGYTNQDAKKTDYITGYTTHTQDSNEPCLTSYSNHAT
KKSDYITRYRNHAHDSNKPYLNGYGNHDAMKSDYITGYRTHAHDSNKPYLTNYANHDAMKSDYI
TGYRTHAQGSNEPYLTDSSNHEVKQPDYITNYRTQSHDSNKPYITNYDNHELNQPDYITGYRTH
AHESNGPYITSYGKHETNQPYITQYRPTSLNLKRLASLNSKDLEGHASPNMDRIEAFKTGYFNL
DDIHVGNVMTLQFPVQEVSPYLPKKEADSIPLSKSQLPSVLQLFSISEDSTQAKSMRGTLEECE
GETTTGETKICANSLESMLEFVDTIIGSNTKHNILSTSKPSPTATPLQKYTILEVSHDIHAPKW
VACHPLPYPYAIYYCHYISTGIKVFKVMLVGDDNGDKMEALGICHLDTSDWNPDHVVFRQLGIK
AGKNTPVCHFFPINHLLWVPVEPTKPTI
Repeat found in LATHSAT_LOCUS28700
Repeat occurs 3 times in a sequence of 311 amino acids
Location between 486689401 and 486691011
Coverage of 5.79 %
Instances:
GIGLSV | GIGIGV | GIGVGI |
pattern: GIG[LVI][SG][VI]
MENSYKANGNGSTENGYSTARRTHSYHSSLKGSLPWLDIRVFYVRVCKCEFDNTTPEVLTLNH
VPLNPDTLLEINGVRSSIYSDGMSTLLKRDRVDRKSEEVTFVSTDSIRMSGSVKFDVFDKDNLL
LFGSLELCNSNGVVKESNSNGQVWSMKCESNIVPGTRFFKEKQLLLPETTLPTIEVYIAGSFSG
TPIILTKTLHLSSQKRHSRKGMLNAIPENDANENGKDPSSALALQGPDYMQDKQEDEDYHSLYT
RTAYADGEDGELSWFNAGVRVGVGIGLSVCLGIGIGVGIMVKTYQGATGQFRRRLL

Similar gene clusters

OZ012741 - Cluster 48 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
OZ012741 - Gene Cluster 48. Type = cyclopeptide. Location: 482203121 - 488761250 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in LATHSAT_LOCUS28674
Repeat occurs 10 times in a sequence of 576 amino acids
Location between 482964988 and 482967236
Coverage of 26.04 %
Instances:
KKPNSYYEVNTRDPN | KKPNHDYEVNTRDPN | KKPNYNYEVNTRDPN | KKPNYNYEVNTRDPN | KKPNYDYEVNTRDPN
KKPNYDYEVNTRDPN | KKPNYDYEVNTRDPN | KKPNYDYEVNTRDPN | KKPNYDYEVYPNSWS | KKPQYNYKVKTHDPS

pattern: KKP[NQ][SHY][DNY]Y[EK]V[NKY][TP][NHR][DS][WP][SN]
MAPTLAFHFLSLVLFFVTMGEGIIVEDLKIELPDQKDIEETKQSNHLHHSIDKAKQPDYDYKV
NIHDHNSWLPWSSRETKKPNSYYEVNTRDPNPWHPWGNRETKKPNHDYEVNTRDPNSWSPWGSR
ESKKPNYNYEVNTRDPNSWSPWGSRESKKPNYNYEVNTRDPNSWSPWGSRESKKPNYDYEVNTR
DPNSWSPWGSRESKKPNYDYEVNTRDPNSWSPWGSRESKKPNYDYEVNTRDPNSWSPWGSRETK
KPNYDYEVNTRDPNSWSPWGSRETKKPNYDYEVYPNSWSPWGSRKTKKSNYDYEVNTRDPNPWR
PWGSRESKKPQYNYKVKTHDPSPDHTEAFEKGFFNLEDLHVGNVMTLQFSHQEIPHFFSRKEEA
DSIPFSVSQLSSVLQLFSIPEDSLEAKIMKGTLEHCQEETVIGETKICANSVESMFEFVDKIIG
SENKQNILRTSYPSPTAAPLQKYTILKVSHDIDAPKWVSCHPIPYPYAIYYCHTMATGTKVFKV
TLVGDKNGDKMEALGMCHLDTADWDPNHMIFRTLRVKPGKNTPVCHFFSINHLLWVPLPNSKVN
I
Repeat found in LATHSAT_LOCUS28678
Repeat occurs 10 times in a sequence of 568 amino acids
Location between 483885437 and 483887483
Coverage of 22.89 %
Instances:
YITGYRTHAQDSN | YITGYRTHAQDSN | YITGYRTHAQDSN | YITGYRTHAQDSN | YITGYRNHAQDSN
YITNYRTQSHNSN | YITNYDNHELNQP | YITGYRTHAHESN | YITSYGKHESNQP | YITQYRPPSLNLK

pattern: YIT[SNQG]Y[DRG][NTKP][HQP][SAE][LHSQ][DNE][SLQ][NKP]
MAHTLPLQFLTVLIFFIMNGQVITARDLKAVLRDHKQGDSDEESYIAGYRTRIHGSNEPYLTS
YGNHETKKFDYITGYRTHAQDSNEPYLTGYANHDIKKSDYITGYRTHAQDSNEPYLTSYGNHDA
KKSDYITGYRTHAQDSNELYLTGYANHDDKKIDYITGYRTHAQDSNEPYQTSYSNHAAKKSDYI
TGYRNHAQDSNKPYLNGYGNHDAMKSDYIAGYRTHAQDSNEPYLTDYSNHEVKQPNYITNYRTQ
SHNSNKPYITNYDNHELNQPDYITGYRTHAHESNGPYITSYGKHESNQPYITQYRPPSLNLKGL
TSLNSKDIEGHASPNMDRTEAFKTGFFNLDDIHVGNVMTLQFPVQEVSPYLPKKEADSIPLSKS
QLPSVLQLFSISEDSTQAKSMRGTLEECEGETITGETKICANSLESMLEFVDTIIGSNTKHNIL
STSKPSPTATHLQKYTILEVSHDIHAPKWVACHPLPYPYAIYYCHYISTGTKVFKVMLVGDDNG
DKMEALGICHLDTSDWNPDHVVFRQLGIKAGKNTPVCHFFPVNHLLWVPVEPTKATV
Repeat found in LATHSAT_LOCUS28679
Repeat occurs 10 times in a sequence of 539 amino acids
Location between 483976157 and 483978061
Coverage of 14.84 %
Instances:
YITGYRIH | YITGYTTH | YITRYRNH | YITGYRTH | YITGYRTH
YITNYRTQ | YITNYDNH | YITGYRTH | YITSYGKH | YITQYRPT

pattern: YIT[NQSRG]Y[DRTG][NIKTP][HTQ]
MAHTLPLQFLIVLIFFIMNGQGITARDLKAVLRDHKQVDSNEESYIAGYRTRIHGSNEPYLTS
YANHDTKKSHYITGYRIHAQDSNEPYLTGYTNQDAKKTDYITGYTTHTQDSNEPCLTSYSNHAT
KKSDYITRYRNHAHDSNKPYLNGYGNHDAMKSDYITGYRTHAHDSNKPYLTNYANHDAMKSDYI
TGYRTHAQGSNEPYLTDSSNHEVKQPDYITNYRTQSHDSNKPYITNYDNHELNQPDYITGYRTH
AHESNGPYITSYGKHETNQPYITQYRPTSLNLKRLASLNSKDLEGHASPNMDRIEAFKTGYFNL
DDIHVGNVMTLQFPVQEVSPYLPKKEADSIPLSKSQLPSVLQLFSISEDSTQAKSMRGTLEECE
GETTTGETKICANSLESMLEFVDTIIGSNTKHNILSTSKPSPTATPLQKYTILEVSHDIHAPKW
VACHPLPYPYAIYYCHYISTGIKVFKVMLVGDDNGDKMEALGICHLDTSDWNPDHVVFRQLGIK
AGKNTPVCHFFPINHLLWVPVEPTKPTI
Repeat found in LATHSAT_LOCUS28700
Repeat occurs 3 times in a sequence of 311 amino acids
Location between 486689401 and 486691011
Coverage of 5.79 %
Instances:
GIGLSV | GIGIGV | GIGVGI |
pattern: GIG[LVI][SG][VI]
MENSYKANGNGSTENGYSTARRTHSYHSSLKGSLPWLDIRVFYVRVCKCEFDNTTPEVLTLNH
VPLNPDTLLEINGVRSSIYSDGMSTLLKRDRVDRKSEEVTFVSTDSIRMSGSVKFDVFDKDNLL
LFGSLELCNSNGVVKESNSNGQVWSMKCESNIVPGTRFFKEKQLLLPETTLPTIEVYIAGSFSG
TPIILTKTLHLSSQKRHSRKGMLNAIPENDANENGKDPSSALALQGPDYMQDKQEDEDYHSLYT
RTAYADGEDGELSWFNAGVRVGVGIGLSVCLGIGIGVGIMVKTYQGATGQFRRRLL

Similar gene clusters

OZ012741 - Cluster 49 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
OZ012741 - Gene Cluster 49. Type = cyclopeptide. Location: 490170021 - 494218929 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

No repeats detected in this cluster.

Similar gene clusters

OZ012741 - Cluster 50 - Alkaloid-saccharide

Gene cluster description

Download cluster GenBank file
OZ012741 - Gene Cluster 50. Type = alkaloid-saccharide. Location: 529607097 - 530250857 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012741 - Cluster 51 - Saccharide

Gene cluster description

Download cluster GenBank file
OZ012741 - Gene Cluster 51. Type = saccharide. Location: 535007888 - 535432529 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012741 - Cluster 52 - Terpene-saccharide

Gene cluster description

Download cluster GenBank file
OZ012741 - Gene Cluster 52. Type = terpene-saccharide. Location: 545134628 - 546113947 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012741 - Cluster 53 - Saccharide

Gene cluster description

Download cluster GenBank file
OZ012741 - Gene Cluster 53. Type = saccharide. Location: 579706736 - 580536446 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012741 - Cluster 54 - Alkaloid-fatty_acid

Gene cluster description

Download cluster GenBank file
OZ012741 - Gene Cluster 54. Type = alkaloid-fatty_acid. Location: 608731383 - 609670935 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

OZ012741 - Cluster 55 - Terpene

Gene cluster description

Download cluster GenBank file
OZ012741 - Gene Cluster 55. Type = terpene. Location: 631365179 - 631845840 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters