NW_027491014.1 - 65 clusters - antiSMASH results

Plant Specialized Metabolite Analysis
Version 2.0

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### Identified secondary metabolite clusters

Cluster | Type | From | To | Size (kb) | Core domains | Product/substrate predicted by subgroup | Most similar known cluster | MIBiG BGC-ID
--- | --- | --- | --- | --- | --- | --- | --- | ---
The following clusters are from record NW_027491016.1:
Cluster 1 | Putative | 1860759 | 1990482 | 129.72 | 2OG-FeII_Oxy, Aminotran_1_2, DIOX_N, Methyltransf_3, p450 | - | - | -
The following clusters are from record NW_027491033.1:
Cluster 2 | Saccharide | 2801398 | 3014781 | 213.38 | AMP-binding, UDPGT_2, adh_short | - | - | -
The following clusters are from record NW_027491038.1:
Cluster 3 | Alkaloid | 1411320 | 1856283 | 444.96 | Cu_amine_oxid, p450 | - | - | -
The following clusters are from record NW_027491050.1:
Cluster 4 | Polyketide | 97212 | 3317289 | 3220.08 | AMP-binding, Chal_sti_synt_C, FAE1_CUT1_RppA, p450 | - | - | -
The following clusters are from record NW_027491062.1:
Cluster 5 | Cyclopeptide | 585820 | 1931456 | 1345.64 | BURP | - | - | -
The following clusters are from record NW_027491075.1:
Cluster 6 | Putative | 339358 | 734700 | 395.34 | Aldo_ket_red, SE | - | - | -
The following clusters are from record NW_027491095.1:
Cluster 7 | Alkaloid | 2058257 | 2433546 | 375.29 | Pyridoxal_deC, SQS_PSY, p450 | - | - | -
The following clusters are from record NW_027491108.1:
Cluster 8 | Cyclopeptide | 1673506 | 2752819 | 1079.31 | BURP | - | - | -
The following clusters are from record NW_027491109.1:
Cluster 9 | Cyclopeptide | 160260 | 722467 | 562.21 | BURP | - | - | -
The following clusters are from record NW_027491112.1:
Cluster 10 | Saccharide | 2138711 | 2424453 | 285.74 | ERG4_ERG24, UDPGT_2, p450 | flavonoid, oleananes | - | -
The following clusters are from record NW_027491123.1:
Cluster 11 | Fatty_acid | 1274810 | 1354109 | 79.30 | ADH_N, ADH_zinc_N, FA_desaturase, p450 | - | - | -
The following clusters are from record NW_027491126.1:
Cluster 12 | Fatty_acid-Saccharide | 637780 | 803525 | 165.75 | FA_hydroxylase, UDPGT_2, p450 | cytokinin | - | -
The following clusters are from record NW_027491136.1:
Cluster 13 | Cyclopeptide | 120878 | 861536 | 740.66 | BURP | - | - | -
The following clusters are from record NW_027491160.1:
Cluster 14 | Fatty_acid | 400647 | 996427 | 595.78 | AMP-binding, Aminotran_1_2, Transferase | - | - | -
The following clusters are from record NW_027491256.1:
Cluster 15 | Saccharide | 836748 | 989617 | 152.87 | Amino_oxidase, UDPGT_2 | alkaloid-2, cytokinin-2 | - | -
The following clusters are from record NW_027491333.1:
Cluster 16 | Saccharide | 696059 | 1577485 | 881.43 | Transferase, UDPGT_2, polyprenyl_synt | small phenolic | - | -
The following clusters are from record NW_027491418.1:
Cluster 17 | Cyclopeptide | 1 | 419764 | 419.76 | BURP | - | - | -
The following clusters are from record NW_027491532.1:
Cluster 18 | Cyclopeptide | 335288 | 1056427 | 721.14 | BURP | - | - | -
The following clusters are from record NW_027491591.1:
Cluster 19 | Polyketide | 187 | 153969 | 153.78 | Chal_sti_synt_C, FAE1_CUT1_RppA, His_biosynth, Methyltransf_11, Trp_syntA | - | - | -
The following clusters are from record NW_027491615.1:
Cluster 20 | Alkaloid | 296805 | 709833 | 413.03 | Acetyltransf_1, Bet_v_1, p450 | - | - | -
The following clusters are from record NW_027491627.1:
Cluster 21 | Fatty_acid | 1 | 1006566 | 1006.57 | FA_desaturase, GMC_oxred_N, adh_short, p450 | - | - | -
The following clusters are from record NW_027491651.1:
Cluster 22 | Terpene | 381126 | 652117 | 270.99 | AMP-binding, SQHop_cyclase_C, SQHop_cyclase_N, p450 | Cycloartenol | - | -
The following clusters are from record NW_027491672.1:
Cluster 23 | Saccharide | 120927 | 359053 | 238.13 | AMP-binding, Cellulose_synt, Epimerase, Methyltransf_11 | - | - | -
The following clusters are from record NW_027491681.1:
Cluster 24 | Cyclopeptide | 86379 | 627264 | 540.88 | BURP | - | - | -
The following clusters are from record NW_027491683.1:
Cluster 25 | Saccharide | 1 | 338357 | 338.36 | 2OG-FeII_Oxy, DIOX_N, Glyco_hydro_1 | - | - | -
The following clusters are from record NW_027491709.1:
Cluster 26 | Putative | 469033 | 713026 | 243.99 | 3Beta_HSD, Abhydrolase_3, Epimerase, Peptidase_S10 | - | - | -
The following clusters are from record NW_027491793.1:
Cluster 27 | Saccharide | 170780 | 820625 | 649.85 | Epimerase, Transferase, UDPGT_2 | flavonoid | - | -
The following clusters are from record NW_027491807.1:
Cluster 28 | Terpene | 562924 | 695159 | 132.24 | Aminotran_1_2, Methyltransf_3, Terpene_synth, Terpene_synth_C, p450 | - | - | -
The following clusters are from record NW_027491822.1:
Cluster 29 | Saccharide-Terpene | 442436 | 929347 | 486.91 | Epimerase, Glycos_transf_1, Methyltransf_11, Methyltransf_7, Terpene_synth, Terpene_synth_C, p450 | - | - | -
The following clusters are from record NW_027491863.1:
Cluster 30 | Saccharide | 353090 | 488933 | 135.84 | Glycos_transf_2, Peptidase_S10 | - | - | -
The following clusters are from record NW_027491975.1:
Cluster 31 | Saccharide | 617865 | 766983 | 149.12 | 2OG-FeII_Oxy, DIOX_N, Glyco_hydro_1 | - | - | -
The following clusters are from record NW_027492011.1:
Cluster 32 | Cyclopeptide | 1 | 578042 | 578.04 | BURP | - | - | -
The following clusters are from record NW_027492037.1:
Cluster 33 | Saccharide | 266173 | 474232 | 208.06 | Cellulose_synt, Epimerase, Methyltransf_11 | - | - | -
The following clusters are from record NW_027492047.1:
Cluster 34 | Saccharide | 159916 | 624277 | 464.36 | 2OG-FeII_Oxy, Aldo_ket_red, DIOX_N, UDPGT_2 | - | - | -
The following clusters are from record NW_027492070.1:
Cluster 35 | Fatty_acid | 34344 | 212765 | 178.42 | CER1-like_C, FA_hydroxylase, Transferase | - | - | -
The following clusters are from record NW_027492082.1:
Cluster 36 | Fatty_acid | 450408 | 611931 | 161.52 | FA_desaturase, p450 | - | - | -
The following clusters are from record NW_027492146.1:
Cluster 37 | Cyclopeptide | 1 | 471764 | 471.76 | BURP | - | - | -
The following clusters are from record NW_027492511.1:
Cluster 38 | Terpene | 365408 | 558272 | 192.86 | Terpene_synth, Terpene_synth_C, p450 | - | - | -
The following clusters are from record NW_027492520.1:
Cluster 39 | Saccharide-Alkaloid | 86621 | 212774 | 126.15 | Bet_v_1, Cellulose_synt, Methyltransf_7 | - | - | -
The following clusters are from record NW_027492527.1:
Cluster 40 | Saccharide-Terpene | 247127 | 369870 | 122.74 | Glycos_transf_1, Prenyltrans, SQHop_cyclase_C, SQHop_cyclase_N, p450 | Lanosterol | - | -
The following clusters are from record NW_027492537.1:
Cluster 41 | Polyketide | 214266 | 453178 | 238.91 | 2OG-FeII_Oxy, Chal_sti_synt_C, DIOX_N, Transferase | - | - | -
The following clusters are from record NW_027492544.1:
Cluster 42 | Alkaloid | 173578 | 471504 | 297.93 | 2OG-FeII_Oxy, Bet_v_1, GMC_oxred_C, GMC_oxred_N | - | - | -
The following clusters are from record NW_027492644.1:
Cluster 43 | Polyketide | 351698 | 400127 | 48.43 | 2OG-FeII_Oxy, Chal_sti_synt_C, Chal_sti_synt_N, DIOX_N, ECH_2 | - | - | -
The following clusters are from record NW_027492654.1:
Cluster 44 | Saccharide | 172156 | 350114 | 177.96 | UDPGT_2, p450 | cyanogenic glucoside-3, monoterpenoid-3 | - | -
The following clusters are from record NW_027493010.1:
Cluster 45 | Cyclopeptide | 162953 | 242492 | 79.54 | BURP | - | - | -
The following clusters are from record NW_027493089.1:
Cluster 46 | Saccharide | 209668 | 411124 | 201.46 | LTP_2, UDPGT_2, p450 | cytokinin-4 | - | -
The following clusters are from record NW_027493172.1:
Cluster 47 | Cyclopeptide | 1 | 414210 | 414.21 | BURP | - | - | -
The following clusters are from record NW_027493276.1:
Cluster 48 | Cyclopeptide | 1 | 273629 | 273.63 | BURP | - | - | -
The following clusters are from record NW_027493278.1:
Cluster 49 | Saccharide | 1 | 163589 | 163.59 | Glycos_transf_2, Peptidase_S10 | - | - | -
The following clusters are from record NW_027493467.1:
Cluster 50 | Saccharide | 144576 | 307624 | 163.05 | 2OG-FeII_Oxy, ABC2_membrane, ABC_tran, Aminotran_1_2, DIOX_N, Glycos_transf_1 | - | - | -
The following clusters are from record NW_027493666.1:
Cluster 51 | Cyclopeptide | 1 | 388589 | 388.59 | BURP | - | - | -
The following clusters are from record NW_027493797.1:
Cluster 52 | Cyclopeptide | 1 | 102924 | 102.92 | BURP | - | - | -
The following clusters are from record NW_027494851.1:
Cluster 53 | Cyclopeptide | 1 | 287872 | 287.87 | BURP | - | - | -
The following clusters are from record NW_027494896.1:
Cluster 54 | Cyclopeptide | 1 | 207549 | 207.55 | BURP | - | - | -
The following clusters are from record NW_027495366.1:
Cluster 55 | Saccharide | 5482 | 264236 | 258.75 | Glycos_transf_2, Peptidase_S10 | - | - | -
The following clusters are from record NW_027495441.1:
Cluster 56 | Cyclopeptide | 1 | 243156 | 243.16 | BURP | - | - | -
The following clusters are from record NW_027495463.1:
Cluster 57 | Cyclopeptide | 1 | 241801 | 241.80 | BURP | - | - | -
The following clusters are from record NW_027495688.1:
Cluster 58 | Cyclopeptide | 1 | 237455 | 237.45 | BURP | - | - | -
The following clusters are from record NW_027495749.1:
Cluster 59 | Cyclopeptide | 1 | 105444 | 105.44 | BURP | - | - | -
The following clusters are from record NW_027496743.1:
Cluster 60 | Cyclopeptide | 1 | 167395 | 167.39 | BURP | - | - | -
The following clusters are from record NW_027498758.1:
Cluster 61 | Cyclopeptide | 1 | 75955 | 75.95 | BURP | - | - | -
The following clusters are from record NW_027504742.1:
Cluster 62 | Cyclopeptide | 1 | 22836 | 22.84 | BURP | - | - | -
The following clusters are from record NW_027505018.1:
Cluster 63 | Saccharide | 87055 | 284966 | 197.91 | Methyltransf_3, UDPGT_2, p450 | flavonoid, oleananes | - | -
The following clusters are from record NW_027505913.1:
Cluster 64 | Polyketide | 11349 | 106136 | 94.79 | 2OG-FeII_Oxy, Chal_sti_synt_C, DIOX_N, Transferase | - | - | -
The following clusters are from record NW_027506483.1:
Cluster 65 | Saccharide | 11259 | 104515 | 93.26 | Glycos_transf_1, SQS_PSY, p450 | - | - | -

### NW_027491016 - Cluster 1 - Putative

### Gene cluster description

Download cluster GenBank file
NW_027491016 - Gene Cluster 1. Type = putative. Location: 1860759 - 1990482 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027491033 - Cluster 2 - Saccharide

### Gene cluster description

Download cluster GenBank file
NW_027491033 - Gene Cluster 2. Type = saccharide. Location: 2801398 - 3014781 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027491038 - Cluster 3 - Alkaloid

### Gene cluster description

Download cluster GenBank file
NW_027491038 - Gene Cluster 3. Type = alkaloid. Location: 1411320 - 1856283 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027491050 - Cluster 4 - Polyketide

### Gene cluster description

Download cluster GenBank file
NW_027491050 - Gene Cluster 4. Type = polyketide. Location: 97212 - 3317289 nt. Click on genes for more information.
Show pHMM detection rules used
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027491062 - Cluster 5 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_027491062 - Gene Cluster 5. Type = cyclopeptide. Location: 585820 - 1931456 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC143558366
Repeat occurs 15 times in a sequence of 1150 amino acids
Location between 984053 and 987506
Coverage of 10.43 %
Instances:
NPQAYPGS | NPQAYPSS | NPQTYPGS | NPQAYRGS | NPQAYPGS
NPQAYPGS | NPQAYPGS | NPQAYPGL | NPQGHPGL | NPQAYPGS
NPQAYPGS | NPQAYPGS | NPQAYPGS | NPQANPGS | NPQANPGS
pattern: NPQ[TGA][HNY][PR][SG][LS]
METLKGSDTLIEGLVSSKQDEFGGKFDFDPCKVNRVDSSSHVTEVPIKGISLFVELKGGVASK
LDVESVRDVNVNVDVKNSLLHENKVKFNVDVGQQESEVNVGDLVWAIIKRQKWWPGIICDTANA
ANVAANRPTREDDVLVKFFGNGKFVWCSPYEVRPFVGYFDQIPNQSTAKKFHLAFEKAVTVFGY
RVKREFTCSCLSSFNMKADKRCNLGDYSVARFEPAAFLEHIKDLAKDISRGQKTDNVAKHNCLS
AFYRSLGHLQIPMHQLKPANGSPSKIKTENENGYFIDDFDKLNETRERRKSSFLSYPGEFGIDE
SNVDVMEGVGLSQTGGQSQPVKKPRKKWTRKKKVVEVNICSSDVLSQLRFAAQDCFYPCESKNF
DLVQRFVSGFRKVAFKDSTGEIPVDVLNHQDLQETLPKKAKKDKTVISPAFGNGFSSEIPVGMV
NHQILQETLPKKARKKKEKFILPAFGNNLYHDPRFMNFQNVGPHNLQAQSMENKKTEWQTNQAN
ILNYGHVPPPHPPPCKLEPIRPKNVADNVTSMPTWNADIRTPPPNVHHMEGLYQAPMYFTNQFG
SSPPYFTGNLGQPQTGLGQNGLTRVPKKRGRKRKNVDLQANPGSALNPQAYPGSTMNPQAYPSS
ALNPQTYPGSALNPQAYRGSALNPQAYPGSALNPQAYPGSAMNPQAYPGSAMNPQAYPGLPMNP
QGHPGLSMNPQAYPGSTMNPQAYPGSTMNPQAYPGSVMNPQAYPGSTMIPQANPGSTMNPQANP
GSTMNPQANPGSNVVPNPNENVTGQKKQKREKKSKEIGVKCIDLSYNKVQQDDSDVKGTAFLLK
FSSEYPLPTNQDLHSVFSKFGALIESETQVSNENLSGQVVFLDSSSAGGAFWGLQNEKPFGPVL
VNYKIQHLAGSESLVPFKTPIKSPSGPKPIDPKAVIGPTMMPDLNSNSNSSEVQIIKRSQTIEE
IRLPSNDNYLSYTKVQQGNEPVSGTALILKFSPNYPLPSSQDLNLVFCKYGELNELETRVCVQN
FTGQVVFVNPSVAGDAINKFQKDQPFGPALLSYRVDHLYNVQSAVQVKSPVNKDVGVVQPAVQV
VKSAVSKDFGVIKKNLEMMNMMLEKSGESLSPEMRGKLESEIKGLMKKLSVMDGSSSASSSCL

Repeat found in LOC143558366
Repeat occurs 15 times in a sequence of 1127 amino acids
Location between 984053 and 987506
Coverage of 10.65 %
Instances:
NPQAYPGS | NPQAYPSS | NPQTYPGS | NPQAYRGS | NPQAYPGS
NPQAYPGS | NPQAYPGS | NPQAYPGL | NPQGHPGL | NPQAYPGS
NPQAYPGS | NPQAYPGS | NPQAYPGS | NPQANPGS | NPQANPGS
pattern: NPQ[TGA][HNY][PR][SG][LS]
METLKGSDTLIEGLVSSKQDEFGGKFDFDPCKVNRVDSSSHVTEVPIKGISLFVELKGGVASK
LDVESVRDVNVNVDVKNSLLHENKVKFNVDVGQQESEVNVGDLVWAIIKRQKWWPGIICDTANA
ANVAANRPTREDDVLVKFFGNGKFVWCSPYEVRPFVGYFDQIPNQSTAKKFHLAFEKAVTVFGY
RVKREFTCSCLSSFNMKADKRCNLGDYSVARFEPAAFLEHIKDLAKDISRGQKTDNVAKHNCLS
AFYRSLGHLQIPMHQLKPANGSPSKIKTENENGYFIDDFDKLNETRERRKSSFLSYPGEFGIDE
SNVDVMEGVGLSQTGGQSQPVKKPRKKWTRKKKVVEVNICSSDVLSQLRFAAQDCFYPCESEIP
VDVLNHQDLQETLPKKAKKDKTVISPAFGNGFSSEIPVGMVNHQILQETLPKKARKKKEKFILP
AFGNNLYHDPRFMNFQNVGPHNLQAQSMENKKTEWQTNQANILNYGHVPPPHPPPCKLEPIRPK
NVADNVTSMPTWNADIRTPPPNVHHMEGLYQAPMYFTNQFGSSPPYFTGNLGQPQTGLGQNGLT
RVPKKRGRKRKNVDLQANPGSALNPQAYPGSTMNPQAYPSSALNPQTYPGSALNPQAYRGSALN
PQAYPGSALNPQAYPGSAMNPQAYPGSAMNPQAYPGLPMNPQGHPGLSMNPQAYPGSTMNPQAY
PGSTMNPQAYPGSVMNPQAYPGSTMIPQANPGSTMNPQANPGSTMNPQANPGSNVVPNPNENVT
GQKKQKREKKSKEIGVKCIDLSYNKVQQDDSDVKGTAFLLKFSSEYPLPTNQDLHSVFSKFGAL
IESETQVSNENLSGQVVFLDSSSAGGAFWGLQNEKPFGPVLVNYKIQHLAGSESLVPFKTPIKS
PSGPKPIDPKAVIGPTMMPDLNSNSNSSEVQIIKRSQTIEEIRLPSNDNYLSYTKVQQGNEPVS
GTALILKFSPNYPLPSSQDLNLVFCKYGELNELETRVCVQNFTGQVVFVNPSVAGDAINKFQKD
QPFGPALLSYRVDHLYNVQSAVQVKSPVNKDVGVVQPAVQVVKSAVSKDFGVIKKNLEMMNMML
EKSGESLSPEMRGKLESEIKGLMKKLSVMDGSSSASSSCL

Repeat found in LOC143558366
Repeat occurs 15 times in a sequence of 1139 amino acids
Location between 984053 and 987506
Coverage of 10.54 %
Instances:
NPQAYPGS | NPQAYPSS | NPQTYPGS | NPQAYRGS | NPQAYPGS
NPQAYPGS | NPQAYPGS | NPQAYPGL | NPQGHPGL | NPQAYPGS
NPQAYPGS | NPQAYPGS | NPQAYPGS | NPQANPGS | NPQANPGS
pattern: NPQ[TGA][HNY][PR][SG][LS]
METLKGSDTLIEGLFDFDPCKVNRVDSSSHVTEVPIKGISLFVELKGGVASKLDVESVRDVNV
NVDVKNSLLHENKVKFNVDVGQQESEVNVGDLVWAIIKRQKWWPGIICDTANAANVAANRPTRE
DDVLVKFFGNGKFVWCSPYEVRPFVGYFDQIPNQSTAKKFHLAFEKAVTVFGYRVKREFTCSCL
SSFNMKADKRCNLGDYSVARFEPAAFLEHIKDLAKDISRGQKTDNVAKHNCLSAFYRSLGHLQI
PMHQLKPANGSPSKIKTENENGYFIDDFDKLNETRERRKSSFLSYPGEFGIDESNVDVMEGVGL
SQTGGQSQPVKKPRKKWTRKKKVVEVNICSSDVLSQLRFAAQDCFYPCESKNFDLVQRFVSGFR
KVAFKDSTGEIPVDVLNHQDLQETLPKKAKKDKTVISPAFGNGFSSEIPVGMVNHQILQETLPK
KARKKKEKFILPAFGNNLYHDPRFMNFQNVGPHNLQAQSMENKKTEWQTNQANILNYGHVPPPH
PPPCKLEPIRPKNVADNVTSMPTWNADIRTPPPNVHHMEGLYQAPMYFTNQFGSSPPYFTGNLG
QPQTGLGQNGLTRVPKKRGRKRKNVDLQANPGSALNPQAYPGSTMNPQAYPSSALNPQTYPGSA
LNPQAYRGSALNPQAYPGSALNPQAYPGSAMNPQAYPGSAMNPQAYPGLPMNPQGHPGLSMNPQ
AYPGSTMNPQAYPGSTMNPQAYPGSVMNPQAYPGSTMIPQANPGSTMNPQANPGSTMNPQANPG
SNVVPNPNENVTGQKKQKREKKSKEIGVKCIDLSYNKVQQDDSDVKGTAFLLKFSSEYPLPTNQ
DLHSVFSKFGALIESETQVSNENLSGQVVFLDSSSAGGAFWGLQNEKPFGPVLVNYKIQHLAGS
ESLVPFKTPIKSPSGPKPIDPKAVIGPTMMPDLNSNSNSSEVQIIKRSQTIEEIRLPSNDNYLS
YTKVQQGNEPVSGTALILKFSPNYPLPSSQDLNLVFCKYGELNELETRVCVQNFTGQVVFVNPS
VAGDAINKFQKDQPFGPALLSYRVDHLYNVQSAVQVKSPVNKDVGVVQPAVQVVKSAVSKDFGV
IKKNLEMMNMMLEKSGESLSPEMRGKLESEIKGLMKKLSVMDGSSSASSSCL

### Similar gene clusters

### NW_027491075 - Cluster 6 - Putative

### Gene cluster description

Download cluster GenBank file
NW_027491075 - Gene Cluster 6. Type = putative. Location: 339358 - 734700 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027491095 - Cluster 7 - Alkaloid

### Gene cluster description

Download cluster GenBank file
NW_027491095 - Gene Cluster 7. Type = alkaloid. Location: 2058257 - 2433546 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027491108 - Cluster 8 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_027491108 - Gene Cluster 8. Type = cyclopeptide. Location: 1673506 - 2752819 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NW_027491109 - Cluster 9 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_027491109 - Gene Cluster 9. Type = cyclopeptide. Location: 160260 - 722467 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

The following known motifs were found in CDS LOC143603517
Location between 397712 and 402459
.L.Y..Y was found 2 times in this sequence
Sequence:
MPLGDNGDKSDSRYCGLETEFNDDMPHVLSYNINGGFDFVVAPLMEPGYRSSLVNKANRESSV
PPFTGSDLVLSPAQWSSHVVGKISSWIDLDSEDDVLREDSEIALKQEIAWASHLSLQACLLPTP
KGNSCANYARCVNDILQDLNNMQLWLRIPLVKSDEDDGDSVNGTSDGMVVEHTDSWELWNSFRA
LCEHHSQLSVALDVLSSLPSVNSLGRWFGEPLKAAIVHTDSFLTNARGYPCLSKRHQKLLSSFF
YHSIQIVLSGKAVHNLPVGTSPSGSEAQRHEIRSYLDYVAYLYQNMEPLTEQERFELGYRDYLQ
SPLQPLMDNLEAQTYETFEKDSVKYIQYQRAVSKALVDRIPDEKASTTTAVLMVVGAGRGPLIR
ASLQAAEETGRKIRVFAVEKNPNAVVTLHSLVKLEGWENTVTIISCDMRCWEAPEKADILVSEL
LGSFGDNELSPECLDGAQRFLKPDGISIPQSYTSFMQPVTTSKLYNDIKLHKDLLHFETAYVVK
LHRLAKLSPSQAVFTFTHPNNSPNKSNQRYKKLRFDIPVETGSCIVHGFAGYFDSVLYKDVHLG
IEPTTATPNMFSWFPIFFPLRSPMYVKAGSLLDFHIWRCCGNTKVWYEWCVTSPTASPIHNSNG
RSYWVGL

The following known motifs were found in CDS LOC143603517
Location between 397712 and 402459
.L.Y..Y was found 2 times in this sequence
Sequence:
MPLGDNGDKSDSRYCGLETEFNDDMPHVLSYNINGGFDFVVAPLMEPGYRSSLVNKANRESSV
PPFTGSDLVLSPAQWSSHVVGKISSWIDLDSEDDVLREDSEIALKQEIAWASHLSLQACLLPTP
KGNSCANYARCVNDILQDLNNMQLWLRIPLVKSDEDDGDSVNGTSDGMVVEHTDSWELWNSFRA
LCEHHSQLSVALDVLSSLPSVNSLGRWFGEPLKAAIVHTDSFLTNARGYPCLSKRHQKLLSSFF
YHSIQIVLSGKAVHNLPVGTSPSGSEAQRHEIRSYLDYVAYLYQNMEPLTEQERFELGYRDYLQ
SPLQPLMDNLEAQTYETFEKDSVKYIQYQRAVSKALVDRIPDEKASTTTAVSLLNYFLHYQEVI
FCFLIFLTVAYHLETCALCNPICVLQVLMVVGAGRGPLIRASLQAAEETGRKIRVFAVEKNPNA
VVTLHSLVKLEGWENTVTIISCDMRCWEAPEKADILVSELLGSFGDNELSPECLDGAQRFLKPD
GISIPQSYTSFMQPVTTSKLYNDIKLHKDLLHFETAYVVKLHRLAKLSPSQAVFTFTHPNNSPN
KSNQRYKKLRFDIPVETGSCIVHGFAGYFDSVLYKDVHLGIEPTTATPNMFSWFPIFFPLRSPM
YVKAGSLLDFHIWRCCGNTKVWYEWCVTSPTASPIHNSNGRSYWVGL

The following known motifs were found in CDS LOC143603517
Location between 397712 and 402459
.L.Y..Y was found 2 times in this sequence
Sequence:
MPLGDNGDKSDSRYCGLETEFNDDMPHVLSYNINGGFDFVVAPLMEPGYRSSLVNKANRESSV
PPFTGSDLVLSPAQWSSHVVGKISSWIDLDSEDDVLREDSEIALKQEIAWASHLSLQACLLPTP
KGNSCANYARCVNDILQDLNNMQLWLRIPLVKSDEDDGDSVNGTSDGMVVEHTDSWELWNSFRA
LCEHHSQLSVALDVLSSLPSVNSLGRWFGEPLKAAIVHTDSFLTNARGYPCLSKRHQKLLSSFF
YHSIQIVLSGKAVHNLPVGTSPSGSGQTNNNAQPQRHEIRSYLDYVAYLYQNMEPLTEQERFEL
GYRDYLQSPLQPLMDNLEAQTYETFEKDSVKYIQYQRAVSKALVDRIPDEKASTTTAVSLLNYF
LHYQEVIFCFLIFLTVAYHLETCALCNPICVLQVLMVVGAGRGPLIRASLQAAEETGRKIRVFA
VEKNPNAVVTLHSLVKLEGWENTVTIISCDMRCWEAPEKADILVSELLGSFGDNELSPECLDGA
QRFLKPDGISIPQSYTSFMQPVTTSKLYNDIKLHKDLLHFETAYVVKLHRLAKLSPSQAVFTFT
HPNNSPNKSNQRYKKLRFDIPVETGSCIVHGFAGYFDSVLYKDVHLGIEPTTATPNMFSWFPIF
FPLRSPMYVKAGSLLDFHIWRCCGNTKVWYEWCVTSPTASPIHNSNGRSYWVGL

The following known motifs were found in CDS LOC143603517
Location between 397712 and 402459
.L.Y..Y was found 2 times in this sequence
Sequence:
MPLGDNGDKSDSRYCGLETEFNDDMPHVLSYNINGGFDFVVAPLMEPGYRSSLVNKANRESSV
PPFTGSDLVLSPAQWSSHVVGKISSWIDLDSEDDVLREDSEIALKQEIAWASHLSLQACLLPTP
KGNSCANYARCVNDILQDLNNMQLWLRIPLVKSDEDDGDSVNGTSDGMVVEHTDSWELWNSFRA
LCEHHSQLSVALDVLSSLPSVNSLGRWFGEPLKAAIVHTDSFLTNARGYPCLSKRHQKLLSSFF
YHSIQIVLSGKAVHNLPVGTSPSGSGQTNNNAQQAQRHEIRSYLDYVAYLYQNMEPLTEQERFE
LGYRDYLQSPLQPLMDNLEAQTYETFEKDSVKYIQYQRAVSKALVDRIPDEKASTTTAVLMVVG
AGRGPLIRASLQAAEETGRKIRVFAVEKNPNAVVTLHSLVKLEGWENTVTIISCDMRCWEAPEK
ADILVSELLGSFGDNELSPECLDGAQRFLKPDGISIPQSYTSFMQPVTTSKLYNDIKLHKDLLH
FETAYVVKLHRLAKLSPSQAVFTFTHPNNSPNKSNQRYKKLRFDIPVETGSCIVHGFAGYFDSV
LYKDVHLGIEPTTATPNMFSWFPIFFPLRSPMYVKAGSLLDFHIWRCCGNTKVWYEWCVTSPTA
SPIHNSNGRSYWVGL

The following known motifs were found in CDS LOC143603517
Location between 397712 and 402459
.L.Y..Y was found 2 times in this sequence
Sequence:
MPLGDNGDKSDSRYCGLETEFNDDMPHVLSYNINGGFDFVVAPLMEPGYRSSLVNKANRESSV
PPFTGSDLVLSPAQWSSHVVGKISSWIDLDSEDDVLREDSEIALKQEIAWASHLSLQACLLPTP
KGNSCANYARCVNDILQDLNNMQLWLRIPLVKSDEDDGDSVNGTSDGMVVEHTDSWELWNSFRA
LCEHHSQLSVALDVLSSLPSVNSLGRWFGEPLKAAIVHTDSFLTNARGYPCLSKRHQKLLSSFF
YHSIQIVLSGKAVHNLPVGTSPSGSGQTNNNAQQAQRHEIRSYLDYVAYLYQNMEPLTEQERFE
LGYRDYLQSPLQPLMDNLEAQTYETFEKDSVKYIQYQRAVSKALVDRIPDEKASTTTAVSLLNY
FLHYQEVIFCFLIFLTVAYHLETCALCNPICVLQVLMVVGAGRGPLIRASLQAAEETGRKIRVF
AVEKNPNAVVTLHSLVKLEGWENTVTIISCDMRCWEAPEKADILVSELLGSFGDNELSPECLDG
AQRFLKPDGISIPQSYTSFMQPVTTSKLYNDIKLHKDLLHFETAYVVKLHRLAKLSPSQAVFTF
THPNNSPNKSNQRYKKLRFDIPVETGSCIVHGFAGYFDSVLYKDVHLGIEPTTATPNMFSWFPI
FFPLRSPMYVKAGSLLDFHIWRCCGNTKVWYEWCVTSPTASPIHNSNGRSYWVGL

Repeat found in LOC143603670
Repeat occurs 3 times in a sequence of 375 amino acids
Location between 710551 and 719271
Coverage of 5.6 %
Instances:
MPPHGFM | MPPYGTP | MPPGSYP |
pattern: MPP[HYG][SG][YTF][PM]
MGSSEKDKSSKEEKDPTKESKTTNSQTSGAAKGTVNPDWTGFQPYPHMPPHGFMASSPQAHPY
MWGVQPIMPPYGTPPHPYVAMYPPGGIYAHPSMPPGSYPFSPYAMPSPNGVAGASGNSNSPGNA
EVDGKSPDGKEKLPIKRSKGSLGNINMITGKNNEPNKAGASANGAYPKSAESGSEGSSEGSDGN
SENDSQMKSGSRQDSIEATGENGNSANGAPNGPVSVVNQTMPGPATNLNIGMEYWNGTNPSHVP
AMHGNITAAPVAAAGIVTAGSRDNMQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDEL
AQRAEVLKDENSSLRAEVGRLRSEYEQLLAQNVSLKERLGETSGQEEMASAGNEDH

Repeat found in LOC143603670
Repeat occurs 3 times in a sequence of 375 amino acids
Location between 710551 and 719271
Coverage of 5.6 %
Instances:
MPPHGFM | MPPYGTP | MPPGSYP |
pattern: MPP[HYG][SG][YTF][PM]
MGSSEKDKSSKEEKDPTKESKTTNSQEQTSGAAKGTVNPDWTGFQPYPHMPPHGFMASSPQAH
PYMWGVQPIMPPYGTPPHPYVAMYPPGGIYAHPSMPPGSYPFSPYAMPSPNGVAGASGNSNSPG
NAEVDGKSPDGKEKLPIKRSKGSLGNINMITGKNNEPNKAGASANGAYPKSAESGSEGSSEGSD
GNSENDSQMKSGSRQDSIEGENGNSANGAPNGPVSVVNQTMPGPATNLNIGMEYWNGTNPSHVP
AMHGNITAAPVAAAGIVTAGSRDNMQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDEL
AQRAEVLKDENSSLRAEVGRLRSEYEQLLAQNVSLKERLGETSGQEEMASAGNEDH

Repeat found in LOC143603670
Repeat occurs 3 times in a sequence of 377 amino acids
Location between 710551 and 719271
Coverage of 5.57 %
Instances:
MPPHGFM | MPPYGTP | MPPGSYP |
pattern: MPP[HYG][SG][YTF][PM]
MGSSEKDKSSKEEKDPTKESKTTNSQEQTSGAAKGTVNPDWTGFQPYPHMPPHGFMASSPQAH
PYMWGVQPIMPPYGTPPHPYVAMYPPGGIYAHPSMPPGSYPFSPYAMPSPNGVAGASGNSNSPG
NAEVDGKSPDGKEKLPIKRSKGSLGNINMITGKNNEPNKAGASANGAYPKSAESGSEGSSEGSD
GNSENDSQMKSGSRQDSIEATGENGNSANGAPNGPVSVVNQTMPGPATNLNIGMEYWNGTNPSH
VPAMHGNITAAPVAAAGIVTAGSRDNMQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECD
ELAQRAEVLKDENSSLRAEVGRLRSEYEQLLAQNVSLKERLGETSGQEEMASAGNEDH

Repeat found in LOC143603670
Repeat occurs 3 times in a sequence of 380 amino acids
Location between 710551 and 719271
Coverage of 5.53 %
Instances:
MPPHGFM | MPPYGTP | MPPGSYP |
pattern: MPP[HYG][SG][YTF][PM]
MGSSEKDKSSKEEKDPTKESKTTNSQEQTSGAAKGTVNPDWTGFQPYPHMPPHGFMASSPQAH
PYMWGVQPIMPPYGTPPHPYVAMYPPGGIYAHPSMPPGSYPFSPYAMPSPNGVAGASGNSNSPG
NAEVDGKSPDGKEKLPIKRSKGSLGNINMITGKNNEPNKAGASANGAYPKSAESGSEGSSEGSD
GNSENLLQDSQMKSGSRQDSIEATGENGNSANGAPNGPVSVVNQTMPGPATNLNIGMEYWNGTN
PSHVPAMHGNITAAPVAAAGIVTAGSRDNMQSQLWLQDERELKRQRRKQSNRESARRSRLRKQA
ECDELAQRAEVLKDENSSLRAEVGRLRSEYEQLLAQNVSLKERLGETSGQEEMASAGNEDH

### Similar gene clusters

### NW_027491112 - Cluster 10 - Saccharide

### Gene cluster description

Download cluster GenBank file
NW_027491112 - Gene Cluster 10. Type = saccharide. Location: 2138711 - 2424453 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027491123 - Cluster 11 - Fatty_acid

### Gene cluster description

Download cluster GenBank file
NW_027491123 - Gene Cluster 11. Type = fatty_acid. Location: 1274810 - 1354109 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027491126 - Cluster 12 - Fatty_acid-saccharide

### Gene cluster description

Download cluster GenBank file
NW_027491126 - Gene Cluster 12. Type = fatty_acid-saccharide. Location: 637780 - 803525 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027491136 - Cluster 13 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_027491136 - Gene Cluster 13. Type = cyclopeptide. Location: 120878 - 861536 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC143619565
Repeat occurs 4 times in a sequence of 526 amino acids
Location between 470624 and 476560
Coverage of 4.56 %
Instances:
ESDEND | ESDEND | ESDENV | ESDADS |
pattern: ESD[EA][ND][SDV]
MNDGDGAIPSPEIESARIELRSRWELASVLNFVKVFESIIGNDLKISAEEIEQSLIIPDKRLR
LLHVMLLKGIPPVSRNQNNPDAWVVTLSKKLLMWWPWVAEGDFPLTAAKGAEMATYKNLDPTVR
LIILKALCEIRADQHDVVAYINDEVKVKKDISAFCKKNIGQDGKGTSYWLDGNETIGFRLYKEV
KSTKGNETPPTMSYQWETLATNLDEFQKVVAEYSSSKSKVKVAVSAVVEKEAIPLLNKMFKKKQ
RETQKKLNEERILNNFSRSGITRSCRNRKPITYTFDEYDKVISNAIRESKKMPTKDEQKSVKKA
TAVHEDPPQDGEGKPTESDENDAYEETAEDSEENAGSEEGSGEESNEKVASEDSGEESDENDGS
EDSGEESDENVASEDSGDESGENDEYKEKKNVKRNGDRSKEEETEEEETEEDTEDGQSDESDAD
SENNELEATNVAENEDNRKDNTSNAIKKNAEDDDRYVQEREHFGTKKRLVQRPNRNTALETAIV
PDSEEETSSEDNSDE

### Similar gene clusters

### NW_027491160 - Cluster 14 - Fatty_acid

### Gene cluster description

Download cluster GenBank file
NW_027491160 - Gene Cluster 14. Type = fatty_acid. Location: 400647 - 996427 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027491256 - Cluster 15 - Saccharide

### Gene cluster description

Download cluster GenBank file
NW_027491256 - Gene Cluster 15. Type = saccharide. Location: 836748 - 989617 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027491333 - Cluster 16 - Saccharide

### Gene cluster description

Download cluster GenBank file
NW_027491333 - Gene Cluster 16. Type = saccharide. Location: 696059 - 1577485 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027491418 - Cluster 17 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_027491418 - Gene Cluster 17. Type = cyclopeptide. Location: 1 - 419764 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NW_027491532 - Cluster 18 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_027491532 - Gene Cluster 18. Type = cyclopeptide. Location: 335288 - 1056427 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC143635667
Repeat occurs 3 times in a sequence of 256 amino acids
Location between 660876 and 662507
Coverage of 7.03 %
Instances:
SPLRAD | SPLRAD | SPLSKT |
pattern: SPL[SR][KA][TD]
MDFLKHHHRHHSSATSHRSISDADSQLDEFHSPLRADSPLRADDISSTSTAVIAVTPLKSPLS
KTLNPSHTVNVAPLAKSPAPAKEEAVSGGGAGKGWRRSEVMVERVQLGFRVCEMVLCLIAFSVM
VSDKTKGWSGDSFDRYKEYRYLVGVNVIAFAYATFQAIDHAYLLVYAKHIVTYSLRCHVDFLID
QILAYLLVSLSSSAATRVDDWVLNWGKDEFTKMASASVVMSFLAFLSFAISSLISGYNLCDQNS
F

### Similar gene clusters

### NW_027491591 - Cluster 19 - Polyketide

### Gene cluster description

Download cluster GenBank file
NW_027491591 - Gene Cluster 19. Type = polyketide. Location: 187 - 153969 nt. Click on genes for more information.
Show pHMM detection rules used
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027491615 - Cluster 20 - Alkaloid

### Gene cluster description

Download cluster GenBank file
NW_027491615 - Gene Cluster 20. Type = alkaloid. Location: 296805 - 709833 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027491627 - Cluster 21 - Fatty_acid

### Gene cluster description

Download cluster GenBank file
NW_027491627 - Gene Cluster 21. Type = fatty_acid. Location: 1 - 1006566 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027491651 - Cluster 22 - Terpene

### Gene cluster description

Download cluster GenBank file
NW_027491651 - Gene Cluster 22. Type = terpene. Location: 381126 - 652117 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027491672 - Cluster 23 - Saccharide

### Gene cluster description

Download cluster GenBank file
NW_027491672 - Gene Cluster 23. Type = saccharide. Location: 120927 - 359053 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027491681 - Cluster 24 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_027491681 - Gene Cluster 24. Type = cyclopeptide. Location: 86379 - 627264 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC143531722
Repeat occurs 4 times in a sequence of 633 amino acids
Location between 355814 and 357828
Coverage of 5.69 %
Instances:
FTSYSDNVN | FTSYGKNGN | FTSYGENGN | FTSYRDQSN |
pattern: FTSY[GSR][EDK][QN][SGV]N
MHKSKNNFFFTPILILIFSSINVLVFAGVTEDPFTPKASLIRYWNKQISNGLPKPSFLIEKAS
PLTAVQSAAFSKLAGNQNALAGKLPEFCSTANLLCFPDVGPSLEKHSGDVNFTEYAEKNFTNYG
SGHLGGFDSFKNYSNDGNSALNSFRRYSRDSVGHGDKFATYARNTNVPDQSFNTYGIKATGGNG
DFNGYAEEVNVPNMRFTSYSDNVNGREQTFASYSQDANAGDQRFTSYGKNGNGAVNGFKSYGNN
SNVIGSSFSGYGENGNGANDSFTSYGENGNVPQNNFKSYADNGNAAVNSFTSYRDQSNVGDDTF
KSYAKSSNGAIEKFNNYGNSFNEGTDTFSGYGGGTVNNQKFGFKGYGVNNTFKDYADKKRASFA
TYATRATAAEMAAMKTKSAASGKPVNKWIEPGKFFRESLLQSGMIMPMPDIRDKMPKRSFLPRV
ILSKLPFSSSKIADLQNIFHAEDTNSSMYRFIAGSLSECERKPSAGESKRCVGSVEDMIDFATS
VLGRDVVVRTTENTNGSGKSVKVGLIKKINGGKITKSVSCHQSLFPYLLYYCHSVPKVRVYEAD
LLDPSTGSKINHGVAICHIDTSAWSPTHGAFLSLGSGPGKIEVCHWIFENDMTWAVAD

### Similar gene clusters

### NW_027491683 - Cluster 25 - Saccharide

### Gene cluster description

Download cluster GenBank file
NW_027491683 - Gene Cluster 25. Type = saccharide. Location: 1 - 338357 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027491709 - Cluster 26 - Putative

### Gene cluster description

Download cluster GenBank file
NW_027491709 - Gene Cluster 26. Type = putative. Location: 469033 - 713026 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027491793 - Cluster 27 - Saccharide

### Gene cluster description

Download cluster GenBank file
NW_027491793 - Gene Cluster 27. Type = saccharide. Location: 170780 - 820625 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027491807 - Cluster 28 - Terpene

### Gene cluster description

Download cluster GenBank file
NW_027491807 - Gene Cluster 28. Type = terpene. Location: 562924 - 695159 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027491822 - Cluster 29 - Saccharide-terpene

### Gene cluster description

Download cluster GenBank file
NW_027491822 - Gene Cluster 29. Type = saccharide-terpene. Location: 442436 - 929347 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027491863 - Cluster 30 - Saccharide

### Gene cluster description

Download cluster GenBank file
NW_027491863 - Gene Cluster 30. Type = saccharide. Location: 353090 - 488933 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027491975 - Cluster 31 - Saccharide

### Gene cluster description

Download cluster GenBank file
NW_027491975 - Gene Cluster 31. Type = saccharide. Location: 617865 - 766983 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027492011 - Cluster 32 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_027492011 - Gene Cluster 32. Type = cyclopeptide. Location: 1 - 578042 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC143540915
Repeat occurs 5 times in a sequence of 943 amino acids
Location between 300341 and 307831
Coverage of 7.95 %
Instances:
DDEDDKKDTKSLDDE | DDENKDTKSPDDEKK | DDEKKDTKSPDDEKK | DDEKKDTKSPDDEKK | DDEKKEAGQSQQEND
pattern: DDE[NDK][DK][EDK][ATK][GDK][QTS][SPK][QDS][QLD][ED][NDK][EDK]
MDQNHNSPANAAEQPPPSSSEPPQPSRRRGVKRKSSNFSNSNTSTPPTASSSKRQTREKPSPV
LFSPIHNGPLTRARLQPNYAETASFWEAVEVSGGEGGDGGEGKVLAAKVSAKVEEELNARREAW
EAVEKEVEKEYEVVKRRGESVHVVPNSAGWFSWNKIHPLEEKALPSFFNGKLENRTRESYMEIR
NAIMKRFHENPNTQIEEKDLSEISVGELDAKKEVMEFLDYWGLINYHPLPEPDTVNSVGDTEEA
VKVNSLIQKLFDFDSGQSCSPAVLKSSLATPAIPYWLPESIIVDDLAHPEGPSVEYHCNSCAAD
CSRKRYHCQKQADFDLCTECFNEGKFDSDMAPSDFILMEPGDAAGASSGTWTDQETLLLLEALQ
LFKENWNEIAEHVATKTKAQCILHFLQMPIEDAFRDCDDEDDKKDTKSLDDENKDTKSPDDEKK
DTKSPDDEKKDTKSPDDEKKEAGQSQQENDDKMEVDKENGDSQDMKETEDPKSNNDQPMEISES
ADNGKSKDKEENGVNIAVKALKEVFESVGSVDEKLCFADAGNPVMAMASFFTRLVKPNVATASA
RTSLKSVSKGGTGLQLSARHSFVLEDPTDETKKADETDRDVQEVVDQEAVKEKDDSSNKEKEEK
EDTKVTENENKTEKQSVSDEKKEETVTAEATVSKKGKNAGTRRKGLKKDKDPATEKPVITEETN
KHRINWIPSDSKKETEDSADGAPELALVVSESTEAPKDEEMAEKTELPSSTLAENTPNSVDTEP
KDSKNEDKKDSDAEDDPVMVKLTRAAVTTISAAAVKAKFLADQEEDQIRQLATSLVEKQLHKLE
TKLAFFTEMDGVVSRAREHLERSKQRLYHERAQIIATRLGMSGAAGSRPMGGHPLQRPPNPNAN
PNPNSMAMTPQRPPLSRPMMGPVPPFSNPMVSSPMGPATVAGNNQAMK

Repeat found in LOC143540915
Repeat occurs 5 times in a sequence of 793 amino acids
Location between 301945 and 307831
Coverage of 9.46 %
Instances:
DDEDDKKDTKSLDDE | DDENKDTKSPDDEKK | DDEKKDTKSPDDEKK | DDEKKDTKSPDDEKK | DDEKKEAGQSQQEND
pattern: DDE[NDK][DK][EDK][ATK][GDK][QTS][SPK][QDS][QLD][ED][NDK][EDK]
MPNSAGWFSWNKIHPLEEKALPSFFNGKLENRTRESYMEIRNAIMKRFHENPNTQIEEKDLSE
ISVGELDAKKEVMEFLDYWGLINYHPLPEPDTVNSVGDTEEAVKVNSLIQKLFDFDSGQSCSPA
VLKSSLATPAIPYWLPESIIVDDLAHPEGPSVEYHCNSCAADCSRKRYHCQKQADFDLCTECFN
EGKFDSDMAPSDFILMEPGDAAGASSGTWTDQETLLLLEALQLFKENWNEIAEHVATKTKAQCI
LHFLQMPIEDAFRDCDDEDDKKDTKSLDDENKDTKSPDDEKKDTKSPDDEKKDTKSPDDEKKEA
GQSQQENDDKMEVDKENGDSQDMKETEDPKSNNDQPMEISESADNGKSKDKEENGVNIAVKALK
EVFESVGSVDEKLCFADAGNPVMAMASFFTRLVKPNVATASARTSLKSVSKGGTGLQLSARHSF
VLEDPTDETKKADETDRDVQEVVDQEAVKEKDDSSNKEKEEKEDTKVTENENKTEKQSVSDEKK
EETVTAEATVSKKGKNAGTRRKGLKKDKDPATEKPVITEETNKHRINWIPSDSKKETEDSADGA
PELALVVSESTEAPKDEEMAEKTELPSSTLAENTPNSVDTEPKDSKNEDKKDSDAEDDPVMVKL
TRAAVTTISAAAVKAKFLADQEEDQIRQLATSLVEKQLHKLETKLAFFTEMDGVVSRAREHLER
SKQRLYHERAQIIATRLGMSGAAGSRPMGGHPLQRPPNPNANPNPNSMAMTPQRPPLSRPMMGP
VPPFSNPMVSSPMGPATVAGNNQAMK

### Similar gene clusters

### NW_027492037 - Cluster 33 - Saccharide

### Gene cluster description

Download cluster GenBank file
NW_027492037 - Gene Cluster 33. Type = saccharide. Location: 266173 - 474232 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027492047 - Cluster 34 - Saccharide

### Gene cluster description

Download cluster GenBank file
NW_027492047 - Gene Cluster 34. Type = saccharide. Location: 159916 - 624277 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027492070 - Cluster 35 - Fatty_acid

### Gene cluster description

Download cluster GenBank file
NW_027492070 - Gene Cluster 35. Type = fatty_acid. Location: 34344 - 212765 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027492082 - Cluster 36 - Fatty_acid

### Gene cluster description

Download cluster GenBank file
NW_027492082 - Gene Cluster 36. Type = fatty_acid. Location: 450408 - 611931 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027492146 - Cluster 37 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_027492146 - Gene Cluster 37. Type = cyclopeptide. Location: 1 - 471764 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

No repeats detected in this cluster.

### Similar gene clusters

### NW_027492511 - Cluster 38 - Terpene

### Gene cluster description

Download cluster GenBank file
NW_027492511 - Gene Cluster 38. Type = terpene. Location: 365408 - 558272 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027492520 - Cluster 39 - Saccharide-alkaloid

### Gene cluster description

Download cluster GenBank file
NW_027492520 - Gene Cluster 39. Type = saccharide-alkaloid. Location: 86621 - 212774 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027492527 - Cluster 40 - Saccharide-terpene

### Gene cluster description

Download cluster GenBank file
NW_027492527 - Gene Cluster 40. Type = saccharide-terpene. Location: 247127 - 369870 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027492537 - Cluster 41 - Polyketide

### Gene cluster description

Download cluster GenBank file
NW_027492537 - Gene Cluster 41. Type = polyketide. Location: 214266 - 453178 nt. Click on genes for more information.
Show pHMM detection rules used
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027492544 - Cluster 42 - Alkaloid

### Gene cluster description

Download cluster GenBank file
NW_027492544 - Gene Cluster 42. Type = alkaloid. Location: 173578 - 471504 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027492644 - Cluster 43 - Polyketide

### Gene cluster description

Download cluster GenBank file
NW_027492644 - Gene Cluster 43. Type = polyketide. Location: 351698 - 400127 nt. Click on genes for more information.
Show pHMM detection rules used
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027492654 - Cluster 44 - Saccharide

### Gene cluster description

Download cluster GenBank file
NW_027492654 - Gene Cluster 44. Type = saccharide. Location: 172156 - 350114 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027493010 - Cluster 45 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_027493010 - Gene Cluster 45. Type = cyclopeptide. Location: 162953 - 242492 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

No repeats detected in this cluster.

### Similar gene clusters

No significant ClusterBlast hits found.

### NW_027493089 - Cluster 46 - Saccharide

### Gene cluster description

Download cluster GenBank file
NW_027493089 - Gene Cluster 46. Type = saccharide. Location: 209668 - 411124 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027493172 - Cluster 47 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_027493172 - Gene Cluster 47. Type = cyclopeptide. Location: 1 - 414210 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC143561396
Repeat occurs 4 times in a sequence of 374 amino acids
Location between 363367 and 365865
Coverage of 13.9 %
Instances:
GGVSVHAPGVNVG | GGVSVHAPGTNVG | GGVSVHAPGTNVG | GGVIVRCHNKKKP |
pattern: GGV[IS]V[HR][CA][HP][NG][TKV][NK][KV][PG]
MEFVHILTFLSLAMVASYAAVTPETYWKSVLPNTPMPKAISDLLHNDKSTNVQVGIGKGGVSV
HAPGVNVGVGSGGVSVHAPGTNVGVGKGGGVSVHAPGTNVGDVKATPKGNCEKVDVGKGGVIVR
CHNKKKPIDVEVAPFSYKYAATDDQLKDDPNVALFFLEKDMHQGNAMNLHFTKTTSPSSTFLPR
KVANTIPFSSKKLPELYTRFSIKPNTVEFESMKKTIDECEDKGMEGEKKYCATSLEAMVDFSTS
ELGKKVKAVSTEVNARKSTPLQKYTIVEARKLASDVAVVCHKQNYQYAVFYCHKTITIKAYVVS
LLGVDGTKAKAAAVCHTDTAKWNPKHLAFRVLKVKQGTTPVCHFLPEDHVVWVPY

### Similar gene clusters

### NW_027493276 - Cluster 48 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_027493276 - Gene Cluster 48. Type = cyclopeptide. Location: 1 - 273629 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC143562905
Repeat occurs 11 times in a sequence of 230 amino acids
Location between 17512 and 18205
Coverage of 33.48 %
Instances:
PSPPGSG | PSPPGSG | PSPPDGG | PSPSPGG | PSPGGGQ
PSPPDGG | PSPEGGP | PSPPSGG | PSPPDGG | PSPPDGA
PSPDGGK |
pattern: PSP[GEDPS][PSDG][GS][GKPAQ]
MTETDFKMVKALVCEKPSKTWFGACKDEVKCDKQCIEWEGADHGTCHEREAKYMCFCYVQCSP
KDKTPIPPKGKQPAPPRGKQPAPPKGGQPSPPGSGSAPPKGGQPSPPGSGQPPPPAGGQPSPPD
GGKPAPSPSPGGGQPSPPDGGQPSPEGGPPSPPSGGQPSPPDGGQPTPPGGGGGGGGGGGQPSP
PDGAPPSPDGGKSAPPPGCTRLNIDKLIAEALAKHNIRV

Repeat found in LOC143562917
Repeat occurs 3 times in a sequence of 474 amino acids
Location between 270939 and 272364
Coverage of 3.8 %
Instances:
LIKACV | LIKGLC | LIKGLC |
pattern: LIK[GA][CL][CV]
MALVHVTKRTVLILPTNITHFSSAASPPSSTADPTVTSAVSILKHHRSKSRWTHLRTLFPSGF
TPSQFSQITLQLRNNPHLALTFFQFTLTHSLCHHSLSSYASIIHTLARSRQKTQTLTLIQSAIR
KFNDPNPNSLFETLVKTYRTFDSAPFVFDLLIKACVQSKRVEHAIEIVRLLRSKGISPLISTCN
SLVLCVCKHHGSIAGYEIYNEVFDSSGYKKVAGVKTVVANVHTYNIMMHAFYKDGLIENLERVW
SDMFVNNCVPNEYSYAILMAAYCDDGRMADAVRVWEEMGSNGLEYDVMAYNTMIGGFCEAGNVC
KAEEFFKEMGLGDVKSSSVTYEHLISGYCKIGDVDSAMLLYKDMCRKGFVPVGFTVDLLIKGLC
VNNKVSEGVRVLRFAVKNNVVVSGGSYEFLIKGLCDEGRMEESMKLQAEMVGKGYEPSSEIYSA
FISGYEKEGNVELVSKLKTELLVRCGG

### Similar gene clusters

### NW_027493278 - Cluster 49 - Saccharide

### Gene cluster description

Download cluster GenBank file
NW_027493278 - Gene Cluster 49. Type = saccharide. Location: 1 - 163589 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027493467 - Cluster 50 - Saccharide

### Gene cluster description

Download cluster GenBank file
NW_027493467 - Gene Cluster 50. Type = saccharide. Location: 144576 - 307624 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027493666 - Cluster 51 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_027493666 - Gene Cluster 51. Type = cyclopeptide. Location: 1 - 388589 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC143567409
Repeat occurs 6 times in a sequence of 377 amino acids
Location between 313348 and 315580
Coverage of 11.14 %
Instances:
VGVGKGG | VGVGKGG | VGVGKGG | VGVHTGK | VGVGKGG
VGVHPGY |
pattern: VGV[HG][TPK]G[YGK]
MKFFLVYACTLLSVALIGSHAVTPEAYWKSKLPNSPIPKSIKYLLNTEWNDEKSTAVGVGKGG
VSVHTGKPGKRTDVGVGKGGVSVHTGSPGKGTNVGVGKGGVGVHTGKPGRGTNVGVGKGGVEVH
TGHKGKPVYVGVHPGYSPFLYKYAASEDQLKDSPNVALFFTENNLHQGAEFNLHFTKNDQKSTF
LPRKVADSIPFSSNKLPQIYEEFSVKPDSVEAEMMKQTLNECENTGIEGEEKYCATSLESMVDF
STTKLGKNVRAISTEVNNKESTSLQKYQIEAAKTLAANKAVVCHKQNYPYAVFYCHKTVSTKVY
AVSMVGADGTKAKAVAVCHTDTAKWNPKHLAFQVLKVKPGTVPICHFLPEDHVVSVPY

### Similar gene clusters

### NW_027493797 - Cluster 52 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_027493797 - Gene Cluster 52. Type = cyclopeptide. Location: 1 - 102924 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC143568712
Repeat occurs 4 times in a sequence of 373 amino acids
Location between 56969 and 58859
Coverage of 13.94 %
Instances:
GGVSVHAPGVNVG | GGVSVHAPGTNVG | GGVSVHAPGTNVG | GGVIVRCHNNKKK |
pattern: GGV[IS]V[HR][CA][HP][NG][NTV][NK][KV][GK]
MEFVHILTFLSLAMVASYAAVTPETYWKSALPNTPMPKAVTDLLDNSTNVQVGIGKGGVSVHA
PGVNVGVGSGGVSVHAPGTNVGVGKGGGVSVHAPGTNVGDVKATPKGNCEKVDVGKGGVIVRCH
NNKKKPVDVEVSPFSYKYAATDDQLKDDPNVALFFLEKDMHKGNAMNLHFTKTTSPSSTFLPRK
VADTIPFSSKKLPELYTRFSIKPNTVESESMKKTIDECEDKGMEGEKKYCATSLEAMVDFSTSE
LGKKVKAVSTEVNARISTPLQKYTIAEAKKLASDVAVVCHKQNYPYAVFYCHKTITTKAYVVSL
LGVDGTKAKAVAVCHTDTVKWNPKHLAFMVLKVKPGATPVCHFLPEDHVVWVPY

### Similar gene clusters

### NW_027494851 - Cluster 53 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_027494851 - Gene Cluster 53. Type = cyclopeptide. Location: 1 - 287872 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NW_027494896 - Cluster 54 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_027494896 - Gene Cluster 54. Type = cyclopeptide. Location: 1 - 207549 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

No repeats detected in this cluster.

### Similar gene clusters

### NW_027495366 - Cluster 55 - Saccharide

### Gene cluster description

Download cluster GenBank file
NW_027495366 - Gene Cluster 55. Type = saccharide. Location: 5482 - 264236 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027495441 - Cluster 56 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_027495441 - Gene Cluster 56. Type = cyclopeptide. Location: 1 - 243156 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC143582984
Repeat occurs 3 times in a sequence of 475 amino acids
Location between 119867 and 121295
Coverage of 3.79 %
Instances:
LIKACV | LIKGLC | LIKGLC |
pattern: LIK[GA][CL][CV]
MASLVHVPKRTVLIVPTTITHFSSVASPPSSTADPTVTFAVSILKHHRSKSRWTPLRTLFPSG
FTPSQFSQITLQLRNNPHLALTFFQFTLTHSLCHHSLSSYASIIHTLARSRQKTQTLTLIQSAI
RRFNDPNPNSLFETLVKTYRAFDSAPFVFDLLIKACVQSKRVEQAIEIVRLLRSKGISPLISTC
NSLVMCVCKHHGSIAGYEIYNEVFDSSGCKKVAGVKTVVANLHTYNIMMHAFYKDGLIENLERV
WSDMFVNNCVPNEYSYAILMAAYCDYGRMADAVRVWEEMGSNGLEYDALAYNTMIGGFCEAGNV
RKAEEFFKEMGLSDVKSSSVTYEHLINGYCKIGDVDSAMLLYKDMCSKGFVPVGFTVDLLIKGL
CVINKVSEGLRVLRFAVKNNVVVSGGSYEFLIKGLCDEGRMEESMKLQAEMVGKGYEPSSEIYS
AFISGYEKEGNVELASKLKTELLVRCGG

### Similar gene clusters

### NW_027495463 - Cluster 57 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_027495463 - Gene Cluster 57. Type = cyclopeptide. Location: 1 - 241801 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC143583128
Repeat occurs 5 times in a sequence of 937 amino acids
Location between 107512 and 115362
Coverage of 3.2 %
Instances:
EKKVEK | EKKDTK | EKKDTK | EKKDTK | EKKEET
pattern: EKK[EDV][ET][TK]
MDQNHNPPATAADSAPPSSSEPPQPSRRRGVKRKSSNFSNTNASTPPTASSSKRQTREKPSPV
LFSPIHNGPLTRARLQPNYAETASFWEAVEVSGGDGEGEGKVLAAKVAAKVEEELNARREAWEA
VEKKVEKEYDVIKNRGESVHVVPNSAGWFSWTKIHPLEEKALPSFFNGKLENRTCESYMEIRNA
IMKRFHENPNTLIEEKDLSEISVGELNAKKEVMEFLDYWGLINYHPLPEPDTVNSVGDTEEAAK
VNSLIQKLYDFDSGQSCSPAVLKSSLATPAIPYRLPESIIVDDSAYPEGPSVEYHCNSCAADCS
RKRYHCQKQADFDLCTECFNEGKFDSDMAPSDFILMEPGDAAGASSGTWTDQETLLLLEALQLF
NENWNEIAEHVATKTKAQCILHFLQMPIEDAFRDCDDEDDKKDTKSPDDEKKDTKSPDDEKKDT
KNPDDEKKDTKNPDDVKKEAGQSQQESDDKMEVDKENGDSQDTKETEDPKSNNDQPIEISESAD
NSKLKDNEENGVNIAVKALKEAFDPVGSVDEKLSFADAGNPVMAMASFFTRLVKPNVVTASART
SLKSVSKGGTGLQLSARHSFVLEDPTDETKKTDDTDRDVQVVVDQEAVKEKTDSSNKEKEEKED
MTVTENKNKTEKQSVSDEKKEETVTAEATVSKKGKTAGTRRKGSKKDKDSAPEKPAITEETNKQ
PDKAEIPSDSKKETEGSADGGPELGLVVSESTEAPKDEMTEKTELPPSTLAENTSNSVVTEPKD
AKNEDKKASDTEDDPVMAKLTRAAVTAISAAAVKAKFLADQEEDQIRQLATSLVEKQLHKLETK
LAFFTEMDGVVSRAREQLERSKQRLYHERAQIIATRLGMSGAAGSRPMAGHPLQRPPNPNLNPM
TMTPQRPPLSRPMMGPVPPFSNPMVSNPMGPATVAGNNQAMK

### Similar gene clusters

### NW_027495688 - Cluster 58 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_027495688 - Gene Cluster 58. Type = cyclopeptide. Location: 1 - 237455 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

No repeats detected in this cluster.

### Similar gene clusters

### NW_027495749 - Cluster 59 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_027495749 - Gene Cluster 59. Type = cyclopeptide. Location: 1 - 105444 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC143584983
Repeat occurs 4 times in a sequence of 373 amino acids
Location between 75726 and 77616
Coverage of 13.94 %
Instances:
GGVSVHAPGVNVG | GGVSVHAPGTNVG | GGVSVHAPGTNVG | GGVIVRCHNNKKK |
pattern: GGV[IS]V[HR][CA][HP][NG][NTV][NK][KV][GK]
MEFVHILTFLSLAMVASYAAVTPETYWKSALPNTPMPKAVTDLLDKSTNVQVGIGKGGVSVHA
PGVNVGVGSGGVSVHAPGTNVGVGKGGGVSVHAPGTNVGDVKATPKGNCEKVDVGKGGVIVRCH
NNKKKPVDVEVSPFSYKYAATDDQLKDDPNVALFFLEKDMHKGNAMNLHFTKTTSPSSTFLPRK
VADTIPFSSKKLPELYTRFSIKPNTVESESMKKTIDECEDKGMEGEKKYCATSLEAMVDFSTSE
LGKKVKAVSTEVNARISTPLQKYTIAEAKKLASDVAVVCHKQNYPYAVFYCHKTITTKAYVVSL
LGIDGTKAKAVAVCHTDTVKWNPKHLAFMVLKVKPGATPVCHFLPEDHVVWVPY

### Similar gene clusters

### NW_027496743 - Cluster 60 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_027496743 - Gene Cluster 60. Type = cyclopeptide. Location: 1 - 167395 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC143590325
Repeat occurs 3 times in a sequence of 372 amino acids
Location between 47477 and 49660
Coverage of 6.45 %
Instances:
SYVASQDE | SYVASQDE | SYVSSMNH |
pattern: SYV[SA]S[QM][ND][HE]
MNFKLLHVFALLLVALVGSHAVSPEVYWKAVLPNSPMPKAIKDILYIESWDDGNEKLSTKDAS
FYIEQPEQTYSYVASQDELKDHQGQFHRYAASKGDASMFIDQPEQTYSYVASQDELKGHHGQFS
DYATSKNQVKDHPAKVSYVSSMNHHPKENLIATLLFLEKDLQQGEEMKLHFLKNYENIAFLPRQ
ISDSIPFSSKDLPEIYSRFSVLPDSVDAKIMKHTLNLCEYKAIKGEERTCVTSLESMVDFSTSQ
LGKRVKALSTEVNAKDTPSQMYKIESVRMLAPSEAVICHKQNYVYAVFYCHITGGTRSHAVSLE
GADGTKVKSVAICHNDTSNWNPKYLAFEVLKVKPGSVPICHFLPEEHILWVPY

### Similar gene clusters

### NW_027498758 - Cluster 61 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_027498758 - Gene Cluster 61. Type = cyclopeptide. Location: 1 - 75955 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC143597744
Repeat occurs 9 times in a sequence of 398 amino acids
Location between 12389 and 14370
Coverage of 15.83 %
Instances:
VGVGKGG | VGVGKGG | VGVHTGS | VGVGKGG | VGVHTGS
VGVGKGG | VGVHTGK | VGVGKGG | VGVTKGP |
pattern: VGV[HTG][TK]G[PSGK]
MKFFLVYVCTLLSVALIGSHAVTPEAYWKSKLPNSPMPNSIKDLLNTEWNDEKSTAVGVGKGG
VSVHTGKPGKRTDVGVGKGGVGVHTGSPGKGTNVGVGKGGVGVHTGSPGKGTNVGVGKGGVGVH
TGKPGKRTDVGVGKGGVQVHTGHKGKPVYVGVTKGPNPFVYNYAASEDQLKDNPNVALFFLEND
LHQDAEFNLHFTKNDQKSTFLPRKIADSIPFSSNKLPQIYDEFSVKPDSVEAEMMKQTLNECEN
TGINGEEKYCATSLESMVDFSTTKLGKNVRAISTEVNAKFSTCPLQKYKIKVVKKLAAKKAVVC
HKQSYPYAVFYCHKTVSTKVYAVSMVGADGTKVKAVAVCHTDTAKWNPKHLAFQVLKVKPGTVP
ICHFLPEDHVVSVPY

### Similar gene clusters

### NW_027504742 - Cluster 62 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_027504742 - Gene Cluster 62. Type = cyclopeptide. Location: 1 - 22836 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

No repeats detected in this cluster.

### Similar gene clusters

### NW_027505018 - Cluster 63 - Saccharide

### Gene cluster description

Download cluster GenBank file
NW_027505018 - Gene Cluster 63. Type = saccharide. Location: 87055 - 284966 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027505913 - Cluster 64 - Polyketide

### Gene cluster description

Download cluster GenBank file
NW_027505913 - Gene Cluster 64. Type = polyketide. Location: 11349 - 106136 nt. Click on genes for more information.
Show pHMM detection rules used
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_027506483 - Cluster 65 - Saccharide

### Gene cluster description

Download cluster GenBank file
NW_027506483 - Gene Cluster 65. Type = saccharide. Location: 11259 - 104515 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters