ClusterBlast scores for NC_016133.3

Table of genes, locations, strands and annotations of query cluster:
XP_010234307.1	13306037	13308021	-	autophagy-related protein 8C	
XP_014757206.1	13306037	13308021	-	LOC10084_1631	
XP_003571384.1	13309591	13311382	-	polyphenol oxidase I, chloroplastic	
XP_003573385.1	13313496	13315243	-	ribosomal RNA small subunit methyltransferase	
XP_003571386.1	13318120	13320756	-	uncharacterized protein At2g29880	
XP_014756239.2	13321831	13323492	+	LOW QUALITY PROTEIN: 5-epiaristolochene 1,3-dihydroxylase	
XP_010234308.1	13324832	13335961	-	starch synthase 3, chloroplastic/amyloplastic	
XP_003571389.2	13341224	13343075	+	polyphenol oxidase, chloroplastic	


Significant hits: 
1. NC_016133.3_c143	Brachypodium distachyon strain Bd21 chromosome 3, Brachypodium_distachyon_v3.0, whole genome shotgun sequence
2. NC_016135.3_c269	Brachypodium distachyon strain Bd21 chromosome 5, Brachypodium_distachyon_v3.0, whole genome shotgun sequence
3. NC_050105.1_c310	Zea mays cultivar B73 chromosome 10, Zm-B73-REFERENCE-NAM-5.0, whole genome shotgun sequence
4. RWGY01000005.1_c408	Eragrostis curvula cultivar Victoria Contig4, whole genome shotgun sequence


Details:

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1. NC_016133.3_c143
Source: Brachypodium distachyon strain Bd21 chromosome 3, Brachypodium_distachyon_v3.0, whole genome shotgun sequence
Type: saccharide
Number of proteins with BLAST hits to this cluster: 19
Cumulative BLAST score: 8926

Table of genes, locations, strands and annotations of subject cluster:
LOC100846310	XP_010234307.1	13306037	13308021	-	autophagy-related_protein_8C
LOC100846615	XP_003571384.1	13309591	13311382	-	polyphenol_oxidase_I,_chloroplastic
LOC100838309	XP_003573385.1	13313496	13315243	-	ribosomal_RNA_small_subunit_methyltransferase
LOC100821113	XP_003571386.1	13318120	13320756	-	uncharacterized_protein_At2g29880
LOC100821412	XP_014756239.2	13321831	13323492	+	LOW_QUALITY_PROTEIN:_5-epiaristolochene_1,3-dihydroxylase
LOC100821718	XP_010234308.1	13324832	13335961	-	starch_synthase_3,_chloroplastic/amyloplastic
LOC100822036	XP_003571389.2	13341224	13343075	+	polyphenol_oxidase,_chloroplastic

Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value):
XP_010234307.1	LOC100846310	100	231	100.0	6.12e-79	
XP_014757206.1	LOC100846310	100	231	100.0	6.12e-79	
XP_003571384.1	LOC100846615	100	1212	100.0	0.0	
XP_003571384.1	LOC100822036	51	508	99.32885906040269	2.86e-173	
XP_003573385.1	LOC100838309	100	686	100.0	3.52e-251	
XP_003571386.1	LOC100821113	100	783	100.0	4.76e-288	
XP_014756239.2	LOC100821412	100	1021	100.0	0.0	
XP_010234308.1	LOC100821718	100	2575	100.0	0.0	
XP_003571389.2	LOC100822036	100	1172	100.0	0.0	
XP_003571389.2	LOC100846615	51	507	101.55440414507773	5.57e-173	



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2. NC_016135.3_c269
Source: Brachypodium distachyon strain Bd21 chromosome 5, Brachypodium_distachyon_v3.0, whole genome shotgun sequence
Type: saccharide
Number of proteins with BLAST hits to this cluster: 11
Cumulative BLAST score: 2482

Table of genes, locations, strands and annotations of subject cluster:
LOC100823729	XP_024312135.1	24791529	24821709	-	transcription_factor_GTE7_isoform_X2
LOC100829049	XP_003579311.1	24813950	24819423	+	putative_disease_resistance_protein_At3g14460
LOC10082_3762	XP_003580578.1	24820164	24821709	-	LOC10082_3762
LOC104585433	XP_010240445.1	24822996	24823278	-	uncharacterized_protein_LOC104585433
LOC100824039	XP_010240449.1	24825678	24829759	-	probable_polyamine_oxidase_2
LOC100829347	XP_010240452.1	24838103	24839825	-	exonuclease_DPD1,_chloroplastic/mitochondrial
LOC100829860	XP_003579313.1	24840886	24848149	+	uncharacterized_protein_At2g34460,_chloroplastic
LOC100824351	XP_003580580.1	24849040	24852192	+	peroxisomal_(S)-2-hydroxy-acid_oxidase_GLO3_isoform_X1
LOC100830165	XP_003579314.1	24853362	24856137	-	protein_NRT1/_PTR_FAMILY_5.10
LOC104585435	XP_024311263.1	24856346	24859279	-	F-box_protein_At5g49610_isoform_X1
LOC100824654	XP_003580581.1	24860820	24863068	+	signal_recognition_particle_14_kDa_protein
LOC100824957	XP_003580582.1	24864172	24866924	+	aminomethyltransferase,_mitochondrial
LOC100827349	XP_003581707.1	24873347	24875489	-	autophagy-related_protein_8C
LOC100830475	XP_010227274.2	24879146	24880940	+	polyphenol_oxidase_I,_chloroplastic
LOC100825259	XP_003580583.1	24882496	24890072	-	starch_synthase_3,_chloroplastic/amyloplastic
LOC100825565	XP_003580584.1	24894566	24894953	-	uncharacterized_protein_LOC100825565
LOC10082_3764	XP_003580585.1	24897338	24901003	-	LOC10082_3764

Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value):
XP_010234307.1	LOC100827349	98	226	99.15966386554622	1.23e-76	
XP_014757206.1	LOC100827349	98	226	99.15966386554622	1.23e-76	
XP_003571384.1	LOC100830475	39	308	94.12751677852349	1.18e-95	
XP_010234308.1	LOC100825259	75	1417	54.982206405693944	0.0	
XP_003571389.2	LOC100830475	38	305	98.61830742659758	2.20e-94	



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3. NC_050105.1_c310
Source: Zea mays cultivar B73 chromosome 10, Zm-B73-REFERENCE-NAM-5.0, whole genome shotgun sequence
Type: saccharide
Number of proteins with BLAST hits to this cluster: 8
Cumulative BLAST score: 2510

Table of genes, locations, strands and annotations of subject cluster:
LOC100383205	XP_008662182.1	145089823	145099483	+	uncharacterized_protein_isoform_X1
LOC10028_3405	XP_008662031.1	145104031	145105544	-	LOC10028_3405
LOC103642073	NP_001316368.1	145108634	145112683	-	probable_polyamine_oxidase_2
LOC100240695	XP_035818833.1	145203116	145205637	-	autophagy-related_protein_8C_isoform_X1
LOC100283178	NP_001362281.1	145212483	145214500	+	polyphenol_oxidase_II
LOC10010_8	NP_001106015.2	145242519	145251126	-	LOC10010_8
LOC103642070	XP_008663612.1	145266121	145266523	-	uncharacterized_protein

Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value):
XP_010234307.1	LOC100240695	97	221	96.63865546218487	1.18e-74	
XP_014757206.1	LOC100240695	97	221	96.63865546218487	1.18e-74	
XP_003571384.1	LOC100283178	40	363	100.83892617449663	9.79e-117	
XP_010234308.1	LOC10010_8	76	1413	54.270462633451956	0.0	
XP_003571389.2	LOC100283178	37	292	99.13644214162349	1.57e-89	



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4. RWGY01000005.1_c408
Source: Eragrostis curvula cultivar Victoria Contig4, whole genome shotgun sequence
Type: transporter_associated
Number of proteins with BLAST hits to this cluster: 6
Cumulative BLAST score: 2161

Table of genes, locations, strands and annotations of subject cluster:
EJB05_09589	TVU43147.1	13628708	13630417	-	hypothetical_protein
EJB05_09588	TVU43146.1	13632107	13634045	-	hypothetical_protein
EJB05_09583	TVU43141.1	13643070	13651326	+	hypothetical_protein
EJB05_09590	TVU43148.1	13653152	13653656	+	hypothetical_protein
EJB05_09581	TVU43139.1	13669233	13671344	+	hypothetical_protein
EJB05_09595	TVU43152.1	13697157	13703336	+	hypothetical_protein
EJB05_09596	TVU43153.1	13706782	13711225	-	hypothetical_protein
EJB05_09592	TVU43149.1	13728645	13729802	+	hypothetical_protein
EJB05_09597	TVU43154.1	13729964	13734974	+	hypothetical_protein
EJB05_09599	TVU43155.1	13742673	13743267	-	hypothetical_protein
EJB05_09594	TVU43151.1	13757706	13760061	+	hypothetical_protein
EJB05_09593	TVU43150.1	13763863	13771661	+	hypothetical_protein

Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value):
XP_003571384.1	EJB05_09581	39	359	102.34899328859059	8.83e-115	
XP_010234308.1	EJB05_09583	68	1470	65.42111506524317	0.0	
XP_003571389.2	EJB05_09581	38	332	106.04490500863557	1.83e-104	

