LOCUS       JABFAC010249170         4654 bp    DNA              UNK 01-JAN-1980
DEFINITION  Gossypium davidsonii isolate 27 Chr01_3506273, whole genome shotgun
            sequence.
ACCESSION   JABFAC010249170
VERSION     JABFAC010249170.1
KEYWORDS    .
SOURCE      .
  ORGANISM  .
            .
FEATURES             Location/Qualifiers
     source          1..4654
                     /organism="Gossypium davidsonii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="Chr01_3506273"
                     /isolate="27"
                     /db_xref="taxon:34287"
                     /tissue_type="leaf"
                     /dev_stage="adult"
                     /geo_loc_name="USA: College Station"
     cluster         1..4654
                     /note="Cluster number: 58"
                     /note="Detection rule(s) for this cluster type:
                     plants/cyclopeptide: (BURP);"
                     /cutoff=8675
                     /extension=34700
                     /product="cyclopeptide"
     gene            complement(510..>2244)
                     /locus_tag="Godav_025827"
     mRNA            complement(join(510..805,891..1505,1653..>2244))
                     /locus_tag="Godav_025827"
                     /product="hypothetical protein"
     CDS             complement(join(510..805,891..1505,1653..>2244))
                     /locus_tag="Godav_025827"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="MBA0637801.1"
                     /translation="CGKGNAGRDLEGNYATAYFHKTSDSANHFDGGDVKNLEDKYSTAY
                     FHKAFDAENLDREKEVTSLEDKYATAYFHKTSDSESHGEGKEVKGLEDKYATAYFHKTS
                     DSENHFNGDDVRNLEDKYSTAYFHKAFAAENLDREKEVKGLEDKYATAYFHKTSNSESH
                     GEGKEVKGLEDKYTTAYFHKTSDSESHDEGKEVKGKEVKGLEDKYATAYFHKTSDSESE
                     VKSLGDKYATAYFHQTSNSESHGERKAMKSLEDKYSTAYFHKAFDLETKSLQQSSEMEN
                     HNMEHHHNHHNHVGSAEIGLFTIDELRGFNVGKKLPIFFPIKNHSLYPPFLPKEVADTI
                     PFSSSQLSNILQFFSVSPNSPKGKAVQDTLIKCELEAAQGETKICATSLESLLDFLSNV
                     WTREIESPKKVACHPMPYLYAVHFCHFDATETKAFRLQLVGDISGDKVDALVVCRMDTS
                     GWSTDHAAFRMLGIKQGNAVCHVFSQGNLVWIQPPVVTVSAM"
                     /domain_record="plants/BURP (E-value: 4.2e-28, bitscore:
                     97.6, seeds: 101)"
                     /sec_met="Type: cyclopeptide"
                     /sec_met="Domains detected: BURP (E-value: 4.2e-28,
                     bitscore: 97.6, seeds: 101)"
                     /sec_met="Kind: biosynthetic"
                     /kmer_dict="{'CGK': [0], 'GKG': [1], 'KGN': [2], 'GNA': [3,
                     474], 'NAG': [4], 'AGR': [5], 'GRD': [6], 'RDL': [7],
                     'DLE': [8, 266], 'LEG': [9], 'EGN': [10], 'GNY': [11],
                     'NYA': [12], 'YAT': [13, 67, 94, 148, 207, 229], 'ATA':
                     [14, 68, 95, 149, 208, 230], 'TAY': [15, 42, 69, 96, 123,
                     150, 177, 209, 231, 258], 'AYF': [16, 43, 70, 97, 124, 151,
                     178, 210, 232, 259], 'YFH': [17, 44, 71, 98, 125, 152, 179,
                     211, 233, 260], 'FHK': [18, 45, 72, 99, 126, 153, 180, 212,
                     261], 'HKT': [19, 73, 100, 154, 181, 213], 'KTS': [20, 74,
                     101, 155, 182, 214], 'TSD': [21, 75, 102, 183, 215], 'SDS':
                     [22, 76, 103, 184, 216], 'DSA': [23], 'SAN': [24], 'ANH':
                     [25], 'NHF': [26, 107], 'HFD': [27, 424], 'FDG': [28],
                     'DGG': [29], 'GGD': [30], 'GDV': [31], 'DVK': [32], 'VKN':
                     [33], 'KNL': [34], 'NLE': [35, 116], 'LED': [36, 63, 90,
                     117, 144, 171, 203, 252], 'EDK': [37, 64, 91, 118, 145,
                     172, 204, 253], 'DKY': [38, 65, 92, 119, 146, 173, 205,
                     227, 254], 'KYS': [39, 120, 255], 'YST': [40, 121, 256],
                     'STA': [41, 122, 257], 'HKA': [46, 127, 262], 'KAF': [47,
                     128, 263, 431], 'AFD': [48, 264], 'FDA': [49, 425], 'DAE':
                     [50], 'AEN': [51, 132], 'ENL': [52, 133], 'NLD': [53, 134],
                     'LDR': [54, 135], 'DRE': [55, 136], 'REK': [56, 137],
                     'EKE': [57, 138], 'KEV': [58, 85, 139, 166, 193, 198, 333],
                     'EVT': [59], 'VTS': [60], 'TSL': [61, 386], 'SLE': [62,
                     251, 387], 'KYA': [66, 93, 147, 206, 228], 'DSE': [77, 104,
                     185, 217], 'SES': [78, 159, 186, 218, 240], 'ESH': [79,
                     160, 187, 241], 'SHG': [80, 161, 242], 'HGE': [81, 162,
                     243], 'GEG': [82, 163], 'EGK': [83, 164, 191], 'GKE': [84,
                     165, 192, 197], 'EVK': [86, 140, 167, 194, 199, 221],
                     'VKG': [87, 141, 168, 195, 200], 'KGL': [88, 142, 169,
                     201], 'GLE': [89, 143, 170, 202], 'SEN': [105], 'ENH':
                     [106, 279], 'HFN': [108], 'FNG': [109], 'NGD': [110],
                     'GDD': [111], 'DDV': [112], 'DVR': [113], 'VRN': [114],
                     'RNL': [115], 'AFA': [129], 'FAA': [130], 'AAE': [131],
                     'TSN': [156, 237], 'SNS': [157, 238], 'NSE': [158, 239],
                     'KYT': [174], 'YTT': [175], 'TTA': [176], 'SHD': [188],
                     'HDE': [189], 'DEG': [190], 'KGK': [196, 361], 'ESE':
                     [219], 'SEV': [220], 'VKS': [222], 'KSL': [223, 250, 270],
                     'SLG': [224], 'LGD': [225], 'GDK': [226, 443], 'FHQ':
                     [234], 'HQT': [235], 'QTS': [236], 'GER': [244], 'ERK':
                     [245], 'RKA': [246], 'KAM': [247], 'AMK': [248], 'MKS':
                     [249], 'FDL': [265], 'LET': [267], 'ETK': [268, 380, 429],
                     'TKS': [269], 'SLQ': [271], 'LQQ': [272], 'QQS': [273],
                     'QSS': [274], 'SSE': [275], 'SEM': [276], 'EME': [277],
                     'MEN': [278], 'NHN': [280], 'HNM': [281], 'NME': [282],
                     'MEH': [283], 'EHH': [284], 'HHH': [285], 'HHN': [286,
                     289], 'HNH': [287, 290], 'NHH': [288], 'NHV': [291], 'HVG':
                     [292], 'VGS': [293], 'GSA': [294], 'SAE': [295], 'AEI':
                     [296], 'EIG': [297], 'IGL': [298], 'GLF': [299], 'LFT':
                     [300], 'FTI': [301], 'TID': [302], 'IDE': [303], 'DEL':
                     [304], 'ELR': [305], 'LRG': [306], 'RGF': [307], 'GFN':
                     [308], 'FNV': [309], 'NVG': [310], 'VGK': [311], 'GKK':
                     [312], 'KKL': [313], 'KLP': [314], 'LPI': [315], 'PIF':
                     [316], 'IFF': [317], 'FFP': [318], 'FPI': [319], 'PIK':
                     [320], 'IKN': [321], 'KNH': [322], 'NHS': [323], 'HSL':
                     [324], 'SLY': [325], 'LYP': [326], 'YPP': [327], 'PPF':
                     [328], 'PFL': [329], 'FLP': [330], 'LPK': [331], 'PKE':
                     [332], 'EVA': [334], 'VAD': [335], 'ADT': [336], 'DTI':
                     [337], 'TIP': [338], 'IPF': [339], 'PFS': [340], 'FSS':
                     [341], 'SSS': [342], 'SSQ': [343], 'SQL': [344], 'QLS':
                     [345], 'LSN': [346, 395], 'SNI': [347], 'NIL': [348],
                     'ILQ': [349], 'LQF': [350], 'QFF': [351], 'FFS': [352],
                     'FSV': [353], 'SVS': [354], 'VSP': [355], 'SPN': [356],
                     'PNS': [357], 'NSP': [358], 'SPK': [359, 405], 'PKG':
                     [360], 'GKA': [362], 'KAV': [363], 'AVQ': [364], 'VQD':
                     [365], 'QDT': [366], 'DTL': [367], 'TLI': [368], 'LIK':
                     [369], 'IKC': [370], 'KCE': [371], 'CEL': [372], 'ELE':
                     [373], 'LEA': [374], 'EAA': [375], 'AAQ': [376], 'AQG':
                     [377], 'QGE': [378], 'GET': [379], 'TKI': [381], 'KIC':
                     [382], 'ICA': [383], 'CAT': [384], 'ATS': [385], 'LES':
                     [388], 'ESL': [389], 'SLL': [390], 'LLD': [391], 'LDF':
                     [392], 'DFL': [393], 'FLS': [394], 'SNV': [396], 'NVW':
                     [397], 'VWT': [398], 'WTR': [399], 'TRE': [400], 'REI':
                     [401], 'EIE': [402], 'IES': [403], 'ESP': [404], 'PKK':
                     [406], 'KKV': [407], 'KVA': [408], 'VAC': [409], 'ACH':
                     [410], 'CHP': [411], 'HPM': [412], 'PMP': [413], 'MPY':
                     [414], 'PYL': [415], 'YLY': [416], 'LYA': [417], 'YAV':
                     [418], 'AVH': [419], 'VHF': [420], 'HFC': [421], 'FCH':
                     [422], 'CHF': [423], 'DAT': [426], 'ATE': [427], 'TET':
                     [428], 'TKA': [430], 'AFR': [432, 465], 'FRL': [433],
                     'RLQ': [434], 'LQL': [435], 'QLV': [436], 'LVG': [437],
                     'VGD': [438], 'GDI': [439], 'DIS': [440], 'ISG': [441],
                     'SGD': [442], 'DKV': [444], 'KVD': [445], 'VDA': [446],
                     'DAL': [447], 'ALV': [448], 'LVV': [449], 'VVC': [450],
                     'VCR': [451], 'CRM': [452], 'RMD': [453], 'MDT': [454],
                     'DTS': [455], 'TSG': [456], 'SGW': [457], 'GWS': [458],
                     'WST': [459], 'STD': [460], 'TDH': [461], 'DHA': [462],
                     'HAA': [463], 'AAF': [464], 'FRM': [466], 'RML': [467],
                     'MLG': [468], 'LGI': [469], 'GIK': [470], 'IKQ': [471],
                     'KQG': [472], 'QGN': [473, 483], 'NAV': [475], 'AVC':
                     [476], 'VCH': [477], 'CHV': [478], 'HVF': [479], 'VFS':
                     [480], 'FSQ': [481], 'SQG': [482], 'GNL': [484], 'NLV':
                     [485], 'LVW': [486], 'VWI': [487], 'WIQ': [488], 'IQP':
                     [489], 'QPP': [490], 'PPV': [491], 'PVV': [492], 'VVT':
                     [493], 'VTV': [494], 'TVS': [495], 'VSA': [496]}"
                     /ripp_evidence="{}"
                     /top_kmer_word="TAY"
                     /top_kmer_hits=15
                     /top_kmer_hits=42
                     /top_kmer_hits=69
                     /top_kmer_hits=96
                     /top_kmer_hits=123
                     /top_kmer_hits=150
                     /top_kmer_hits=177
                     /top_kmer_hits=209
                     /top_kmer_hits=231
                     /top_kmer_hits=258
                     /table="TAYFHKTSDSANH"
                     /table="TAYFHKAFDAENL"
                     /table="TAYFHKTSDSESH"
                     /table="TAYFHKTSDSENH"
                     /table="TAYFHKAFAAENL"
                     /table="TAYFHKTSNSESH"
                     /table="TAYFHKTSDSESH"
                     /table="TAYFHKTSDSESE"
                     /table="TAYFHQTSNSESH"
                     /table="TAYFHKAFDLETK"
                     /pattern="TAYFH[QK][AT][SF][NDA][LAS][AE][NTS][KHLE]"
                     /has_repeat=True
                     /cyclopeptide_analysis="TAYFH[QK][AT][SF][NDA][LAS][AE][NTS
                     ][KHLE]//TAYFHKTSDSANH|TAYFHKAFDAENL|TAYFHKTSDSESH|TAYFHKTS
                     DSENH|TAYFHKAFAAENL|TAYFHKTSNSESH|TAYFHKTSDSESH|TAYFHKTSDSE
                     SE|TAYFHQTSNSESH|TAYFHKAFDLETK//CGKGNAGRDLEGNYATAYFHKTSDSAN
                     HFDGGDVKNLEDKYSTAYFHKAFDAENLDREKEVTSLEDKYATAYFHKTSDSESHGEGK
                     EVKGLEDKYATAYFHKTSDSENHFNGDDVRNLEDKYSTAYFHKAFAAENLDREKEVKGL
                     EDKYATAYFHKTSNSESHGEGKEVKGLEDKYTTAYFHKTSDSESHDEGKEVKGKEVKGL
                     EDKYATAYFHKTSDSESEVKSLGDKYATAYFHQTSNSESHGERKAMKSLEDKYSTAYFH
                     KAFDLETKSLQQSSEMENHNMEHHHNHHNHVGSAEIGLFTIDELRGFNVGKKLPIFFPI
                     KNHSLYPPFLPKEVADTIPFSSSQLSNILQFFSVSPNSPKGKAVQDTLIKCELEAAQGE
                     TKICATSLESLLDFLSNVWTREIESPKKVACHPMPYLYAVHFCHFDATETKAFRLQLVG
                     DISGDKVDALVVCRMDTSGWSTDHAAFRMLGIKQGNAVCHVFSQGNLVWIQPPVVTVSA
                     M//CDS//509|>2244//Godav_025827////"
     assembly_gap    1558..1639
                     /estimated_length=82
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
                     /linkage_evidence="align genus"
     assembly_gap    3161..3246
                     /estimated_length=86
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
                     /linkage_evidence="align genus"
ORIGIN
        1 aaataaattt attaatattt ttttataagt ccttcgttat ttttattatt ttatttaagg
       61 atgattagtg catataatat tattatttat ttatcataga ttttgtttct tattatttat
      121 tatttgaaca ggagaagagt aaccaatcat catccatata gccactcact actattctta
      181 taactgtaga gaacaactga aaacgaagat ggggcactta gaaataaaaa aagagaacag
      241 gggccatcga ttaagataaa atgttagatt ttaattttta agttaatcct ccaattaggt
      301 gtagttaact tccccacaac tttttgcata atatatcaac ataaaatcct ggaagaatag
      361 agccgctgcc tttttgtttg cttgagaacc aagatacata attttattgc ttaattactt
      421 gatagttagt gcagatagaa agacggaact agcataccat gaacgaaact acttgaagca
      481 aatgagagct ccttcgaaca gccaaacatt tacatggcac tcacagtgac gaccggtggc
      541 tgaatccaaa caagattacc ctgagaaaaa acatggcaca cagcgtttcc ttgctttata
      601 ccaagcatgc gaaaggcagc atgatcggtg ctccaaccag aagtatccat acggcaaaca
      661 acaagagcat cgactttatc tccactaatg tcaccaacta attggagtct gaaagctttg
      721 gtctcagtgg catcaaagtg gcaaaaatga actgcataaa gatatggcat tggatgacat
      781 gccaccttct ttggagattc aatctctcga ggagattcca aaactgtgta attttgaaat
      841 attggggttg tgattgttgg gtgccttgtg ctgatgaact tgaaatcaac ctcgggtcca
      901 aacgttgctt agaaaatcaa gtaaagattc taaggaggta gcacagattt tggtctcccc
      961 ttgagctgct tcaagttcgc attttatgag tgtatcttga acggctttgc cttttggaga
     1021 gttaggagaa actgagaaga attgtagaat gttggagagt tgtgaagatg aaaaagggat
     1081 ggtgtcagcg acttctttgg gtaagaaagg agggtaaaga gagtggtttt tgatagggaa
     1141 aaagatgggc aattttttcc ctacgttaaa gccacgtagt tcatctatgg taaacaagcc
     1201 tatctctgca cttccaacat gattatggtg gttgtggtga tgttccatgt tgtgattctc
     1261 catttcagaa gattgctgca gagattttgt ttccaaatca aacgctttgt gaaagtaagc
     1321 cgtggaatat ttgtcttcca aactcttcat tgctttcctt tcaccatggc tttcagaatt
     1381 agaagtttga tgaaaataag ccgtagcata tttgtctccc aagctcttca cttctgattc
     1441 agaatcagaa gttttgtgaa agtaagccgt agcatacttg tcttccaaac ccttcacttc
     1501 tttcccttcg tcatggcttt cagaatcaga agttttgtga aagtaagccg tagtatannn
     1561 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
     1621 nnnnnnnnnn nnnnnnnnnt tgtcttccaa acccttcact tctttccctt cgtcatggct
     1681 ttcagaatca gaagttttgt gaaagtaagc cgtagtatac ttgtcttcca aacccttcac
     1741 ttctttccct tcgccatggc tttcagaatt agaagttttg tgaaagtaag cggtagcata
     1801 cttgtcttcc aaacccttca cttctttttc tctatcaaga ttttcagcag caaaggcttt
     1861 gtggaagtaa gccgtagaat atttgtcttc caaattcctc acatcatctc cattgaagtg
     1921 attttcagaa tcagaagttt tgtgaaagta agccgtagca tacttgtctt ccaaaccctt
     1981 cacttctttc ccttcgccat ggctttcaga atcagaagtt ttgtgaaagt aagccgtagc
     2041 atacttgtct tccaaactcg tcacttcctt ttctctatca agattttcag catcaaaagc
     2101 tttgtggaag taagctgtag aatatttgtc ttccaaattc ttcacatcac ctccatcaaa
     2161 gtgatttgca gaatcagaag ttttgtgaaa gtaagctgta gcataatttc cttccaaatc
     2221 ccttcctgca ttgccttttc cacactaaaa gaagaagaag aagcaagagt tggttaaatt
     2281 aataaataat tttaaagaaa actttggttg atatggattg taatatgtca catctttgag
     2341 aaactaaaaa ttaccattaa aaacacaatg cataataaaa gaagtggaaa agcggatgga
     2401 agaaccattt cctttgattt ttgggagctt tctttctatc tgatgttttt gggatgaaaa
     2461 gctttgaagg ttataaagct atttataagc aaggggaagg ctctaattat ggatctcatt
     2521 tgtgagtctt tactttttta ttatttaaag atgtacggat tagtgtaata acccaacaca
     2581 agcaaatgaa gcacttttgg atttttaaat atgtaagttg tgataaaaat attgttaaat
     2641 aaaatgtttt ttaatttttt aaaaatgatt ttgagtaaaa aatgtcttgc aaaatcctac
     2701 aaattttagt ttttacttaa aaagtgctct tgaaaatctc gttactcata tctgcttttt
     2761 tttcttttac acaaaatatt tagaattact cataattcct cctcaggata atgcatttca
     2821 acgcacttaa atccacatcc tttcacatta acaacaatac ccatatcaat cgaactaaaa
     2881 ctcaatcgac ggttcaattc tttttttaat ttacaatagc tctaatataa ttcattatta
     2941 caagcattaa ctcaaaccat aaaatataaa tttgaagaat aattaaatat atattaatat
     3001 agtaataaaa agaatccaaa ccaaataata tgcatatttc tttaataaga caaataacaa
     3061 tgtattcttt ttattcaaca aatagccttt aaaaaattgt aatgtgtgtg ttttttaata
     3121 tttattatac tctagaatac ttgtcaacca tataacttta nnnnnnnnnn nnnnnnnnnn
     3181 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
     3241 nnnnnnctaa tatactaaaa aaacctttta aactactaca ctttgtttaa acaagtcctt
     3301 gtattaattt tgtagttaaa taagcccctg aattatggtt tttacccata aaacccctta
     3361 attttaatat taaatgtccc attaaaaatg tcctagttga cttttttttt agtaaaattt
     3421 gatctctatt atttaaaata ctttaattaa ttaaatttta taaaatatat atttaataaa
     3481 ctacttcatt ggaaattatt aaaatataat cttctcaaaa ttttatcact aatatatgac
     3541 aactttactg gaatgaaggt agtattcatc taaaatttaa tataatatat cccaatattt
     3601 ctcattacat attcttattt attgaggata aatcaagttg atttgatgtc tagattatca
     3661 gcttggttgc tcaatccgtt ataataaaat cttgtaatta tatcaagttg aaggaggaat
     3721 ttttagagtt tctaattagt ataataatac atttaatttt caaacttaca tattatataa
     3781 atttaatctt aattttacat aattcaataa attaatccta cctttttgtc tgttcttcaa
     3841 ccctaatggg ccaccattta acttcaatca tatcttttgt cattaatatt atgtatcata
     3901 atttgcttaa cagtcttctt tgctttctaa aataaaatgg ctgtgttata gccaggccaa
     3961 ttatgtgggt agcaatggat tctttgcctt gttgatgtca attattgata taggataaag
     4021 ggtaggttgg gatgtctcaa tgatagaatt tgatattagt attaactaaa tatataaatg
     4081 taagttttct ttttttactc caccaaacgt tggggttaca tttatcacat aattatatta
     4141 gttaaaaatt gatattttgg cattaatgca agaaaaagta tagatatttg ttataattac
     4201 atgtaatttt gctagcaatt atacttcttt tagtaaggaa aaatatttat tgaattattt
     4261 atatataagt attgatgtct aaatgtatta ttataccaat tagaaaaaga catcatcatt
     4321 atttccgtta tcaatttaac agtgggcgat caaaatagga acgaatacaa acattaatgc
     4381 ttaaattgaa tttttttttt aaaattagat gatcaaaaca gaaacatagg cataattggg
     4441 tgaccatttg tataatatac cctattctct tttcatatta aaaattgact tcatatcttt
     4501 tctttttaag gaaaattaat tacaattatt taccccattt gggcaaacaa ttaatattca
     4561 tatcttttct ttttaaatat tatatctgta tcataattgg ttttctttaa ttaatttaaa
     4621 ttaattaagg aataaatatt ataattttat atta
//
