NC_056557.1 - 116 clusters - antiSMASH results

Plant Specialized Metabolite Analysis
Version 2.0

- Download all results

Select Gene Cluster:

- Overview
- 1
- 2
- 3
- 4
- 5
- 6
- 7
- 8
- 9
- 10
- 11
- 12
- 13
- 14
- 15
- 16
- 17
- 18
- 19
- 20
- 21
- 22
- 23
- 24
- 25
- 26
- 27
- 28
- 29
- 30
- 31
- 32
- 33
- 34
- 35
- 36
- 37
- 38
- 39
- 40
- 41
- 42
- 43
- 44
- 45
- 46
- 47
- 48
- 49
- 50
- 51
- 52
- 53
- 54
- 55
- 56
- 57
- 58
- 59
- 60
- 61
- 62
- 63
- 64
- 65
- 66
- 67
- 68
- 69
- 70
- 71
- 72
- 73
- 74
- 75
- 76
- 77
- 78
- 79
- 80
- 81
- 82
- 83
- 84
- 85
- 86
- 87
- 88
- 89
- 90
- 91
- 92
- 93
- 94
- 95
- 96
- 97
- 98
- 99
- 100
- 101
- 102
- 103
- 104
- 105
- 106
- 107
- 108
- 109
- 110
- 111
- 112
- 113
- 114
- 115
- 116

### Identified secondary metabolite clusters

Cluster | Type | From | To | Size (kb) | Core domains | Product/substrate predicted by subgroup | Most similar known cluster | MIBiG BGC-ID
--- | --- | --- | --- | --- | --- | --- | --- | ---
The following clusters are from record NC_056557.1:
Cluster 1 | Saccharide-Polyketide | 3136870 | 3578906 | 442.04 | 2OG-FeII_Oxy, Chal_sti_synt_C, DIOX_N, FAE1_CUT1_RppA, Glyco_hydro_1 | - | - | -
Cluster 2 | Cyclopeptide | 4251326 | 5988794 | 1737.47 | BURP | - | - | -
Cluster 3 | Cyclopeptide | 5135548 | 6203494 | 1067.95 | BURP | - | - | -
Cluster 4 | Alkaloid | 8023139 | 8190446 | 167.31 | Bet_v_1, adh_short | - | - | -
Cluster 5 | Alkaloid | 8593643 | 8743651 | 150.01 | Bet_v_1, Methyltransf_11, p450 | - | - | -
Cluster 6 | Cyclopeptide | 9437517 | 10214777 | 777.26 | BURP | - | - | -
Cluster 7 | Cyclopeptide | 14478796 | 15150464 | 671.67 | BURP | - | - | -
Cluster 8 | Saccharide | 24819334 | 24901746 | 82.41 | ADH_N, UDPGT_2, UbiA | flavonoid | - | -
Cluster 9 | Saccharide | 26850278 | 27083885 | 233.61 | Glyco_hydro_1, UDPGT_2, UbiA, oMT | flavonoid-3 | - | -
Cluster 10 | Polyketide | 29928509 | 30278324 | 349.81 | Chal_sti_synt_C, Chal_sti_synt_N, Methyltransf_11, p450 | - | - | -
The following clusters are from record NC_056558.1:
Cluster 11 | Terpene | 9419554 | 9609400 | 189.85 | PRISE, Prenyltransf, p450 | - | - | -
Cluster 12 | Terpene | 13236646 | 13467623 | 230.98 | Abhydrolase_3, Epimerase, Terpene_synth, Terpene_synth_C, adh_short | - | - | -
Cluster 13 | Saccharide-Transporter_associated-Alkaloid | 27480425 | 27727869 | 247.44 | 2OG-FeII_Oxy, ABC_tran, Cellulose_synt, DIOX_N, NAD_binding_1, Pyridoxal_deC | - | - | -
Cluster 14 | Cyclopeptide | 30504081 | 31989625 | 1485.54 | BURP | - | arabidiol/baruol (9% of genes show similarity) | BGC0002906.1_c1
Cluster 15 | Transporter_associated | 40957720 | 41215780 | 258.06 | 2OG-FeII_Oxy, ABC_tran, DIOX_N, Lycopene_cycl, Methyltransf_11 | - | - | -
Cluster 16 | Saccharide | 42752858 | 42842103 | 89.25 | Glyco_hydro_1, Lipoxygenase, p450 | - | - | -
The following clusters are from record NC_056559.1:
Cluster 17 | Cyclopeptide | 4242319 | 4915182 | 672.86 | BURP | - | - | -
Cluster 18 | Saccharide-Terpene | 5656778 | 5839640 | 182.86 | DIOX_N, SQHop_cyclase_C, SQHop_cyclase_N, UDPGT_2 | flavonoid | - | -
Cluster 19 | Cyclopeptide | 14709718 | 15727048 | 1017.33 | BURP | - | - | -
Cluster 20 | Alkaloid | 27305535 | 27436472 | 130.94 | Bet_v_1, NAD_binding_4, Oxidored_FMN | - | - | -
Cluster 21 | Cyclopeptide | 27744929 | 28577238 | 832.31 | BURP | - | - | -
Cluster 22 | Saccharide | 29191327 | 29395074 | 203.75 | Aminotran_1_2, LTP_2, Transferase, UDPGT_2 | *saccharide-3 | - | -
Cluster 23 | Cyclopeptide | 33425384 | 34532904 | 1107.52 | BURP | - | - | -
The following clusters are from record NC_056560.1:
Cluster 24 | Cyclopeptide | 9960990 | 10326087 | 365.10 | BURP | - | - | -
Cluster 25 | Fatty_acid | 14940103 | 15037423 | 97.32 | Acetyltransf_1, FA_hydroxylase, Methyltransf_11 | - | - | -
The following clusters are from record NC_056561.1:
Cluster 26 | Cyclopeptide | 3557161 | 4064220 | 507.06 | BURP | - | - | -
Cluster 27 | Fatty_acid-Alkaloid | 8661604 | 8866671 | 205.07 | Acetyltransf_1, FA_desaturase_2, LTP_2, Pyridoxal_deC | - | - | -
Cluster 28 | Alkaloid | 9789812 | 9883026 | 93.21 | Aldo_ket_red, BBE, FAD_binding_4, p450 | - | - | -
Cluster 29 | Transporter_associated | 11970253 | 12447568 | 477.31 | ABC_tran, Abhydrolase_3, Methyltransf_3, Peptidase_S10, p450 | - | - | -
Cluster 30 | Saccharide | 22646167 | 22757068 | 110.90 | Aldo_ket_red, UDPGT_2, p450 | flavonoid | - | -
Cluster 31 | Fatty_acid | 29785219 | 29884368 | 99.15 | FA_hydroxylase, Methyltransf_11, p450 | - | - | -
The following clusters are from record NC_056562.1:
Cluster 32 | Saccharide | 16635720 | 16908032 | 272.31 | Cellulose_synt, UDPGT_2, p450 | - | - | -
Cluster 33 | Cyclopeptide | 20778621 | 21582324 | 803.70 | BURP | - | - | -
Cluster 34 | Cyclopeptide | 24580466 | 25168949 | 588.48 | BURP | - | - | -
Cluster 35 | Cyclopeptide | 26867360 | 27509910 | 642.55 | BURP | - | - | -
Cluster 36 | Alkaloid | 28503541 | 28661211 | 157.67 | Epimerase, Pyridoxal_deC, adh_short, adh_short_C2 | - | QS-21 (11% of genes show similarity) | BGCMANUAL2.1_c1
Cluster 37 | Saccharide | 34087307 | 34154250 | 66.94 | UDPGT_2, p450 | hydroxycinnamate | - | -
The following clusters are from record NC_056563.1:
Cluster 38 | Cyclopeptide | 4433969 | 5366052 | 932.08 | BURP | - | - | -
Cluster 39 | Cyclopeptide | 11538261 | 12047513 | 509.25 | BURP | - | - | -
Cluster 40 | Cyclopeptide | 14399246 | 17038712 | 2639.47 | BURP | - | - | -
Cluster 41 | Cyclopeptide | 17388259 | 18315061 | 926.80 | BURP | - | - | -
Cluster 42 | Saccharide-Cyclopeptide | 21691304 | 22598935 | 907.63 | ABC_tran, BURP, Glyco_hydro_1, p450 | - | - | -
Cluster 43 | Terpene | 31846763 | 31969629 | 122.87 | 2OG-FeII_Oxy, DIOX_N, Epimerase, Terpene_synth_C | - | - | -
The following clusters are from record NC_056564.1:
Cluster 44 | Cyclopeptide | 1187758 | 2356258 | 1168.50 | BURP | - | - | -
Cluster 45 | Saccharide | 8267216 | 8451874 | 184.66 | Glycos_transf_1, HAD_RAM2_N, Methyltransf_7, Transferase, p450 | - | - | -
Cluster 46 | Saccharide | 14683021 | 14903315 | 220.29 | ADH_N, ADH_zinc_N, Aminotran_1_2, Glyco_hydro_1, Methyltransf_11 | - | - | -
Cluster 47 | Fatty_acid | 16129822 | 16274753 | 144.93 | FA_hydroxylase, Transferase, p450 | - | - | -
The following clusters are from record NC_056565.1:
Cluster 48 | Cyclopeptide | 1468847 | 2957246 | 1488.40 | BURP | - | - | -
Cluster 49 | Saccharide-Transporter_associated-Alkaloid | 15705178 | 15982781 | 277.60 | 3Beta_HSD, ADH_N, ADH_zinc_N, Acetyltransf_1, BBE, FAD_binding_4, LTP_2, UDPGT_2 | small phenolic-3 | - | -
Cluster 50 | Cyclopeptide | 17401488 | 18007318 | 605.83 | BURP | - | - | -
Cluster 51 | Cyclopeptide | 17588001 | 18081731 | 493.73 | BURP | - | - | -
Cluster 52 | Cyclopeptide | 22509341 | 23184634 | 675.29 | BURP | - | - | -
Cluster 53 | Alkaloid | 29122238 | 29392236 | 270.00 | ADH_N, ADH_zinc_N, Epimerase, Pyridoxal_deC | - | - | -
Cluster 54 | Saccharide | 30775213 | 31002316 | 227.10 | ADH_N, ADH_zinc_N, Glyco_transf_28, UDPGT, p450 | - | - | -
Cluster 55 | Polyketide | 33890635 | 33984234 | 93.60 | Chal_sti_synt_C, Chal_sti_synt_N, Methyltransf_3, adh_short | - | - | -
Cluster 56 | Saccharide | 35755521 | 36069554 | 314.03 | Glycos_transf_1, Methyltransf_11, p450 | - | - | -
The following clusters are from record NC_056566.1:
Cluster 57 | Putative | 1726573 | 2147314 | 420.74 | HMGL-like, Methyltransf_11, Transferase, p450 | - | - | -
Cluster 58 | Cyclopeptide | 2482016 | 2769107 | 287.09 | BURP | - | - | -
Cluster 59 | Cyclopeptide | 3130080 | 5230415 | 2100.34 | BURP | - | - | -
Cluster 60 | Cyclopeptide | 14041842 | 14637964 | 596.12 | BURP | - | - | -
Cluster 61 | Terpene-Alkaloid | 21230081 | 21356153 | 126.07 | Acetyltransf_1, Chalcone_2, Lipoxygenase, Str_synth, Terpene_synth, Terpene_synth_C | - | - | -
Cluster 62 | Terpene | 25120622 | 25270390 | 149.77 | 2OG-FeII_Oxy, Abhydrolase_3, Terpene_synth_C | - | - | -
The following clusters are from record NC_056567.1:
Cluster 63 | Alkaloid | 4267587 | 4420228 | 152.64 | Aminotran_3, BBE, Epimerase, FAD_binding_4 | - | - | -
Cluster 64 | Cyclopeptide | 4976045 | 5905856 | 929.81 | BURP | - | alpha-chaconine/alpha-solanine (13% of genes show similarity) | BGC0002722.2_c1
Cluster 65 | Cyclopeptide | 8215621 | 9848423 | 1632.80 | BURP | - | - | -
Cluster 66 | Putative | 23908685 | 24145955 | 237.27 | ADH_N, ADH_zinc_N, Epimerase, GMC_oxred_N, UbiA, p450 | - | - | -
The following clusters are from record NC_056568.1:
Cluster 67 | Saccharide | 1472341 | 1933240 | 460.90 | 2OG-FeII_Oxy, Amino_oxidase, Cellulose_synt, DIOX_N, Dimerisation, Methyltransf_2 | - | - | -
Cluster 68 | Fatty_acid | 2772287 | 2865523 | 93.24 | FA_hydroxylase, Methyltransf_11, adh_short, adh_short_C2 | - | - | -
Cluster 69 | Cyclopeptide | 14588908 | 16737027 | 2148.12 | BURP | - | - | -
Cluster 70 | Cyclopeptide | 20051827 | 20830064 | 778.24 | BURP | - | - | -
Cluster 71 | Cyclopeptide | 22947148 | 23400988 | 453.84 | BURP | - | - | -
The following clusters are from record NC_056569.1:
Cluster 72 | Cyclopeptide | 201493 | 1644212 | 1442.72 | BURP | - | - | -
Cluster 73 | Cyclopeptide | 1419414 | 2052731 | 633.32 | BURP | - | - | -
Cluster 74 | Saccharide | 2212726 | 2260975 | 48.25 | Methyltransf_7, UDPGT_2 | - | - | -
Cluster 75 | Cyclopeptide | 5946190 | 6557160 | 610.97 | BURP | - | - | -
Cluster 76 | Cyclopeptide | 20866690 | 21483577 | 616.89 | BURP | - | - | -
Cluster 77 | Cyclopeptide | 24314376 | 25027571 | 713.20 | BURP | - | - | -
The following clusters are from record NC_056570.1:
Cluster 78 | Fatty_acid-Lignan | 5617287 | 5694283 | 77.00 | AMP-binding, Dirigent, FA_desaturase_2 | - | - | -
Cluster 79 | Terpene | 11065795 | 11331195 | 265.40 | TPMT, Terpene_synth, Terpene_synth_C, p450 | - | - | -
Cluster 80 | Putative | 21449781 | 21833882 | 384.10 | 2OG-FeII_Oxy, Aminotran_1_2, DIOX_N, Dimerisation, Lycopene_cycl, Methyltransf_2, adh_short, p450 | - | - | -
Cluster 81 | Saccharide-Alkaloid | 22044508 | 22275765 | 231.26 | Amino_oxidase, Aminotran_1_2, BBE, FAD_binding_4, Glyco_transf_28, Lycopene_cycl, UDPGT | - | - | -
Cluster 82 | Saccharide | 25667245 | 25782663 | 115.42 | E1_dh, Glycos_transf_1, Peptidase_S10, UDPGT_2 | *saccharide | - | -
Cluster 83 | Cyclopeptide | 28706304 | 29428941 | 722.64 | BURP, Lipoxygenase, Transferase | - | - | -
Cluster 84 | Putative | 29143126 | 29280706 | 137.58 | Lipoxygenase, Transferase | - | - | -
The following clusters are from record NW_024868115.1:
Cluster 85 | Phenolamide | 1956 | 88597 | 86.64 | Orn_Arg_deC_N, Orn_DAP_Arg_deC, Transferase | - | - | -
The following clusters are from record NW_024868124.1:
Cluster 86 | Cyclopeptide | 1 | 189126 | 189.12 | BURP | - | - | -
The following clusters are from record NW_024868169.1:
Cluster 87 | Cyclopeptide | 1 | 173245 | 173.24 | BURP | - | - | -
The following clusters are from record NW_024868210.1:
Cluster 88 | Cyclopeptide | 1 | 160178 | 160.18 | BURP | - | - | -
The following clusters are from record NW_024868316.1:
Cluster 89 | Transporter_associated | 78681 | 324179 | 245.50 | 2OG-FeII_Oxy, ABC2_membrane, ABC_tran, Aminotran_1_2, DIOX_N, PRISE | - | - | -
The following clusters are from record NW_024868374.1:
Cluster 90 | Cyclopeptide | 1 | 118553 | 118.55 | BURP | - | - | -
The following clusters are from record NW_024868400.1:
Cluster 91 | Cyclopeptide | 1 | 529537 | 529.54 | BURP | - | - | -
The following clusters are from record NW_024868405.1:
Cluster 92 | Cyclopeptide | 12539 | 59852 | 47.31 | BURP | - | - | -
The following clusters are from record NW_024868422.1:
Cluster 93 | Cyclopeptide | 1 | 110796 | 110.80 | BURP | - | - | -
The following clusters are from record NW_024868658.1:
Cluster 94 | Cyclopeptide | 1 | 73811 | 73.81 | BURP | - | - | -
The following clusters are from record NW_024868771.1:
Cluster 95 | Cyclopeptide | 30820 | 62812 | 31.99 | BURP | - | - | -
The following clusters are from record NW_024868871.1:
Cluster 96 | Cyclopeptide | 1 | 53649 | 53.65 | BURP | - | - | -
The following clusters are from record NW_024868887.1:
Cluster 97 | Cyclopeptide | 1 | 43159 | 43.16 | BURP | - | - | -
The following clusters are from record NW_024868967.1:
Cluster 98 | Cyclopeptide | 1 | 46394 | 46.39 | BURP | - | - | -
The following clusters are from record NW_024868972.1:
Cluster 99 | Cyclopeptide | 1 | 45962 | 45.96 | BURP | - | - | -
The following clusters are from record NW_024869088.1:
Cluster 100 | Cyclopeptide | 1 | 37316 | 37.31 | BURP | - | - | -
The following clusters are from record NW_024869167.1:
Cluster 101 | Cyclopeptide | 1 | 33088 | 33.09 | BURP | - | - | -
The following clusters are from record NW_024869172.1:
Cluster 102 | Cyclopeptide | 1 | 32906 | 32.91 | BURP | - | - | -
The following clusters are from record NW_024869429.1:
Cluster 103 | Cyclopeptide | 1 | 19506 | 19.50 | BURP | - | - | -
The following clusters are from record NW_024869446.1:
Cluster 104 | Cyclopeptide | 1 | 18409 | 18.41 | BURP | - | - | -
The following clusters are from record NW_024869731.1:
Cluster 105 | Cyclopeptide | 1 | 401614 | 401.61 | BURP | - | - | -
The following clusters are from record NW_024869847.1:
Cluster 106 | Cyclopeptide | 1 | 385394 | 385.39 | BURP | - | - | -
The following clusters are from record NW_024870494.1:
Cluster 107 | Lignan | 288726 | 350733 | 62.01 | Dirigent, Epimerase | - | - | -
The following clusters are from record NW_024870495.1:
Cluster 108 | Cyclopeptide | 1 | 317436 | 317.44 | BURP | - | - | -
The following clusters are from record NW_024870497.1:
Cluster 109 | Cyclopeptide | 1 | 315566 | 315.56 | BURP | - | - | -
The following clusters are from record NW_024870518.1:
Cluster 110 | Cyclopeptide | 88488 | 134940 | 46.45 | BURP | - | - | -
The following clusters are from record NW_024870581.1:
Cluster 111 | Cyclopeptide | 1 | 240977 | 240.98 | BURP | - | - | -
The following clusters are from record NW_024870586.1:
Cluster 112 | Cyclopeptide | 1 | 247233 | 247.23 | BURP | - | - | -
The following clusters are from record NW_024870639.1:
Cluster 113 | Terpene-Alkaloid | 560333 | 704711 | 144.38 | Cu_amine_oxid, Lipoxygenase, Terpene_synth, Terpene_synth_C | - | - | -
The following clusters are from record NW_024870659.1:
Cluster 114 | Fatty_acid | 81478 | 149426 | 67.95 | FA_hydroxylase, Methyltransf_11, p450 | - | - | -
The following clusters are from record NW_024870669.1:
Cluster 115 | Cyclopeptide | 1 | 404052 | 404.05 | BURP | - | - | -
The following clusters are from record NW_024870673.1:
Cluster 116 | Cyclopeptide | 1 | 230815 | 230.81 | BURP | - | - | -

### NC_056557 - Cluster 1 - Saccharide-polyketide

### Gene cluster description

Download cluster GenBank file
NC_056557 - Gene Cluster 1. Type = saccharide-polyketide. Location: 3136870 - 3578906 nt. Click on genes for more information.
Show pHMM detection rules used
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056557 - Cluster 2 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_056557 - Gene Cluster 2. Type = cyclopeptide. Location: 4251326 - 5988794 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122078207
Repeat occurs 3 times in a sequence of 692 amino acids
Location between 4401737 and 4403816
Coverage of 3.9 %
Instances:
LIDMYCACG | LIDMYCKCG | LIDMYGKCG |
pattern: LIDMY[GC][AK]CG
MACLSPSILSLPPPQRLEDPNSSQKPIEEWLFCSLKSPKTLPQLKTLHAHIYKTGLTGNDLVS
GQLLLCCSLSNSIHYARQIFDAIPRPKPFFYNAMIKGYSETGAHHEALRLYSIMRARSVPCDSF
TFPVVLRSASSLARIDVGEELHGLITKTAFDSRVIVRTALIDMYCACGLSDCGRLVFDRTSDRD
VICWNTMIAGYVKCGEFSRAKQLFDGMPEKNISSWNTLIDMYCKCGDIDTAHRLFDEMPGRDLI
SWNSILSGYSKVGQCEAARRLFDEMPQRNVVSWNVVITCYVHNRLFTEALELFRMMQLSDIKPN
EVTVVAVLPACAHLGALDNGQWIHAYICRLQIKMDIYVNTALIDMYGKCGGLEDAQRVFDEANK
KDTFLCSTMIEVMAMHGKAEEAFRVFTYMTSTGIKPSDVTFVGLLKACSHAGLVDFGRKYFEMM
TAEFGLTPKMEHFGCMVDLLGRAGFLEEAHELVKSMPMEPHPVVWATLLSSCRIHGKVKLAEQV
ALRLIELVPQSGETYVLLSNIYSQAGRWNEAANLRKMMKEKGVIKKPGCSSIEVNNDVYEFFAG
DRDHPHCKEIYEMLEQMASRLNTEGYVPQTSSALHDVNLDEKEQALLYHSEKLAVAFGLLSTQH
RTPIRIVKNLRVCDDCHLFMKVVSKYYKRTIIARDCNRFHHFSDGSCSCSDFW

### Similar gene clusters

### NC_056557 - Cluster 3 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_056557 - Gene Cluster 3. Type = cyclopeptide. Location: 5135548 - 6203494 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NC_056557 - Cluster 4 - Alkaloid

### Gene cluster description

Download cluster GenBank file
NC_056557 - Gene Cluster 4. Type = alkaloid. Location: 8023139 - 8190446 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056557 - Cluster 5 - Alkaloid

### Gene cluster description

Download cluster GenBank file
NC_056557 - Gene Cluster 5. Type = alkaloid. Location: 8593643 - 8743651 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056557 - Cluster 6 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_056557 - Gene Cluster 6. Type = cyclopeptide. Location: 9437517 - 10214777 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

No repeats detected in this cluster.

### Similar gene clusters

### NC_056557 - Cluster 7 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_056557 - Gene Cluster 7. Type = cyclopeptide. Location: 14478796 - 15150464 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

No repeats detected in this cluster.

### Similar gene clusters

### NC_056557 - Cluster 8 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_056557 - Gene Cluster 8. Type = saccharide. Location: 24819334 - 24901746 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056557 - Cluster 9 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_056557 - Gene Cluster 9. Type = saccharide. Location: 26850278 - 27083885 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056557 - Cluster 10 - Polyketide

### Gene cluster description

Download cluster GenBank file
NC_056557 - Gene Cluster 10. Type = polyketide. Location: 29928509 - 30278324 nt. Click on genes for more information.
Show pHMM detection rules used
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056558 - Cluster 11 - Terpene

### Gene cluster description

Download cluster GenBank file
NC_056558 - Gene Cluster 11. Type = terpene. Location: 9419554 - 9609400 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056558 - Cluster 12 - Terpene

### Gene cluster description

Download cluster GenBank file
NC_056558 - Gene Cluster 12. Type = terpene. Location: 13236646 - 13467623 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056558 - Cluster 13 - Saccharide-transporter_associated-alkaloid

### Gene cluster description

Download cluster GenBank file
NC_056558 - Gene Cluster 13. Type = saccharide-transporter_associated-alkaloid. Location: 27480425 - 27727869 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))
plants/transporter_associated: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[MatE/LTP_2/ABC2_membrane/ABC_tran]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056558 - Cluster 14 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_056558 - Gene Cluster 14. Type = cyclopeptide. Location: 30504081 - 31989625 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### Similar known gene clusters

### NC_056558 - Cluster 15 - Transporter_associated

### Gene cluster description

Download cluster GenBank file
NC_056558 - Gene Cluster 15. Type = transporter_associated. Location: 40957720 - 41215780 nt. Click on genes for more information.
Show pHMM detection rules used
plants/transporter_associated: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[MatE/LTP_2/ABC2_membrane/ABC_tran]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056558 - Cluster 16 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_056558 - Gene Cluster 16. Type = saccharide. Location: 42752858 - 42842103 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056559 - Cluster 17 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_056559 - Gene Cluster 17. Type = cyclopeptide. Location: 4242319 - 4915182 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NC_056559 - Cluster 18 - Saccharide-terpene

### Gene cluster description

Download cluster GenBank file
NC_056559 - Gene Cluster 18. Type = saccharide-terpene. Location: 5656778 - 5839640 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056559 - Cluster 19 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_056559 - Gene Cluster 19. Type = cyclopeptide. Location: 14709718 - 15727048 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122073634
Repeat occurs 3 times in a sequence of 364 amino acids
Location between 15375863 and 15393834
Coverage of 4.95 %
Instances:
SSEPPG | SSEPPY | SSESSG |
pattern: SSE[SP][SP][GY]
MDAREATRLASSEPPGMMAGPNTYGMSLHTTSMLNPSSAGIMQNLRLPYNQVVTPASRPSDPS
NSGGYHTEGLRPSGFTVNEPVKKKRGRPRKYGPDGSMALGLVPLSSVDGGHSNNNDNNNENNDN
NHPNESSTPSSEPPYKRNRGRPLGSGKKQQQDALGAPGVGFTTHVITVKAGEDVASKIVAFSQQ
GSRTVCIISANGAICNVTLRQPATSGGTVTYEGRFEIISLSGSFLFTENGGSRIRTGGLSVALA
GSDGRVLGGGVAGMLMAAGPVQVIVGSFIADGKKSKSERRLSLPAPQTVGLGAPVATGSPPFQG
ASSESSGQPDSPLNHSSGACNNTGQIQGFSSYSSIPWGSHSANPH

Repeat found in LOC122073634
Repeat occurs 3 times in a sequence of 364 amino acids
Location between 15375863 and 15393834
Coverage of 4.95 %
Instances:
SSEPPG | SSEPPY | SSESSG |
pattern: SSE[SP][SP][GY]
MDAREATRLASSEPPGMMAGPNTYGMSLHTTSMLNPSSAGIMQNLRLPYNQVVTPASRPSDPS
NSGGYHTEGLRPSGFTVNEPVKKKRGRPRKYGPDGSMALGLVPLSSVDGGHSNNNDNNNENNDN
NHPNESSTPSSEPPYKRNRGRPLGSGKKQQQDALGAPGVGFTTHVITVKAGEDVASKIVAFSQQ
GSRTVCIISANGAICNVTLRQPATSGGTVTYEGRFEIISLSGSFLFTENGGSRIRTGGLSVALA
GSDGRVLGGGVAGMLMAAGPVQVIVGSFIADGKKSKSERRLSLPAPQTVGLGAPVATGSPPFQG
ASSESSGQPDSPLNHSSGACNNTGQIQGFSSYSSIPWGSHSANPH

Repeat found in LOC122074821
Repeat occurs 9 times in a sequence of 1591 amino acids
Location between 15676839 and 15681615
Coverage of 5.66 %
Instances:
EPSMNSALAE | EPSQENECDE | EPSQGNEPDE | EPSQGNEPDE | EPSQGNEPDE
EPSQGNEPDE | EPSQGNEHHE | EPSQGNEPIE | EPSENLDGEL |
pattern: EPS[QME][NGE][NSL][ADE][PCLGH][EDAIH][LE]
MENGVAIDVEPHFVDIVAVEDGTSHPKVEDKGVHGFHVSKDSEGDIFVEASEEIHTQESSVKL
DAEQVINGEVPVDKTGDSVSLGVNGMSNVDHGTEKFEEAIKRPGNELNETVYGVGGADEPANVE
DKAEELVPVESNGLDDAGSVGTAETVVNLGDDRGNEPNETFYEVGVADGPANVKDKAEEVVPVE
SNGLDDASSVGIAEAVVNLGNDYTQEREQQVTVEKMTEDSVSTKPVDDIRLADETGNVECNGTE
VVLVQSNGFDGGALVGNSEVELREFSDIVSDRDIEPSMNSALAEGRSDAVPEKSENGDLVKNNL
GESPFHDKADVHAELVKSDVIEPSQENECDELIVHEDSESLELKEPLPNLDGEHQDHQSVQLQN
SSSEKDHSLKESDVIEPSQGNEPDELIVHQASENAELKGHSANLDGEHQDHQSVQLKNSSSEKD
CSVNESDVIEPSQGNEPDELIVHQASESAELKGPSANLDGEHQHHQSVQLKNSSSEKDCFVNES
DVIEPSQGNEPDELIVHQASESAELKGPSANLDGEHQHHQSVQLKNSSSEKDCFVNESDVIEPS
QGNEPDELIVHQASESAELKGPSANLDGEHQVHLSLQLKNSSYEKDRSLKESDVIEPSQGNEHH
EPIVHQTTENMALNGTLANLDGEHQDHKSMQLKNSSSEHGPSLKESDVIEPSQGNEPIELIVHQ
YSENAKLKEPSENLDGELQDHQNVPLKNSSAEQDPSLKEAGTPEVEFPLSAEESDTVKDDAAEP
QAKDTQDSRPMLADRNGREGSSSHVKVGEPDVQETQKVKDRGSTIQSAQNVFSSSENSTNPPLA
LPSRPAGLGSAPPLGAAHRALQQPRANGSIPQRPTQLVEDPMNGEAEENDDEAREKLQMIRVKF
LRLAHRLGQTPHNVVVAQVLYRLGLAEQLQGGNTTRAGAFSFDRASAMAEQLEAAGQEPLDFSC
TIMVIGKTGVGKSATINSIFDEVKFSTDAFNVGTKKVQDVVGTVQGIKVRVIDTPGLLPSMSDQ
RHNEKILHSVKRFIKKTPPDIILYLDRLDMQSRDFGDMPLLRTITEIFGPSIWFNAIVVLTHAA
SAPPEGPNGTASSYEMFVTQRSHVVQQAIRQAAGDMRLMNPVSLVENHSACRTNRAGQRVLPNG
QVWKPHLLLLSFASKILAEANTLLKLQDGPPGKPFATRSRAPPLPFLLSSLLQSRPQLKLPEEQ
FGSDDDAFDEDLDEASDSDEDSEYDELPPFKRLTKAQLAKLSKAQKKAYFDELEYREKLFMKKQ
LKDERKRRKLLKKMTDLAKDLPSEYSESAEEESGGAASVPVPMPDLSLPASFDSDNPTHRYRFL
DSSNQWLVRPVLDTHGWDHDVGYEGINVERLFVIKEKIPLSFSGQVTKDKKEANVQMELAGSVK
HGEGKATSLGFDMQTVGKDMAYTLRSETRFSDFRHNKMAAGLSVTHLGDAVSAGVKVEDKLIVN
KRFRMVLTGGAMTGRGDVAYGGSLEATLRDKDYPLGRTLTTLGLSIMDWHGDLAIGCNVQSQLP
LGRSSNVIARANLNNRGAGQVSIRLNSSEQLQIALIGLIPLFRKLVGYSQQLPFGQ

Repeat found in LOC122074821
Repeat occurs 9 times in a sequence of 1591 amino acids
Location between 15676839 and 15681615
Coverage of 5.66 %
Instances:
EPSMNSALAE | EPSQENECDE | EPSQGNEPDE | EPSQGNEPDE | EPSQGNEPDE
EPSQGNEPDE | EPSQGNEHHE | EPSQGNEPIE | EPSENLDGEL |
pattern: EPS[QME][NGE][NSL][ADE][PCLGH][EDAIH][LE]
MENGVAIDVEPHFVDIVAVEDGTSHPKVEDKGVHGFHVSKDSEGDIFVEASEEIHTQESSVKL
DAEQVINGEVPVDKTGDSVSLGVNGMSNVDHGTEKFEEAIKRPGNELNETVYGVGGADEPANVE
DKAEELVPVESNGLDDAGSVGTAETVVNLGDDRGNEPNETFYEVGVADGPANVKDKAEEVVPVE
SNGLDDASSVGIAEAVVNLGNDYTQEREQQVTVEKMTEDSVSTKPVDDIRLADETGNVECNGTE
VVLVQSNGFDGGALVGNSEVELREFSDIVSDRDIEPSMNSALAEGRSDAVPEKSENGDLVKNNL
GESPFHDKADVHAELVKSDVIEPSQENECDELIVHEDSESLELKEPLPNLDGEHQDHQSVQLQN
SSSEKDHSLKESDVIEPSQGNEPDELIVHQASENAELKGHSANLDGEHQDHQSVQLKNSSSEKD
CSVNESDVIEPSQGNEPDELIVHQASESAELKGPSANLDGEHQHHQSVQLKNSSSEKDCFVNES
DVIEPSQGNEPDELIVHQASESAELKGPSANLDGEHQHHQSVQLKNSSSEKDCFVNESDVIEPS
QGNEPDELIVHQASESAELKGPSANLDGEHQVHLSLQLKNSSYEKDRSLKESDVIEPSQGNEHH
EPIVHQTTENMALNGTLANLDGEHQDHKSMQLKNSSSEHGPSLKESDVIEPSQGNEPIELIVHQ
YSENAKLKEPSENLDGELQDHQNVPLKNSSAEQDPSLKEAGTPEVEFPLSAEESDTVKDDAAEP
QAKDTQDSRPMLADRNGREGSSSHVKVGEPDVQETQKVKDRGSTIQSAQNVFSSSENSTNPPLA
LPSRPAGLGSAPPLGAAHRALQQPRANGSIPQRPTQLVEDPMNGEAEENDDEAREKLQMIRVKF
LRLAHRLGQTPHNVVVAQVLYRLGLAEQLQGGNTTRAGAFSFDRASAMAEQLEAAGQEPLDFSC
TIMVIGKTGVGKSATINSIFDEVKFSTDAFNVGTKKVQDVVGTVQGIKVRVIDTPGLLPSMSDQ
RHNEKILHSVKRFIKKTPPDIILYLDRLDMQSRDFGDMPLLRTITEIFGPSIWFNAIVVLTHAA
SAPPEGPNGTASSYEMFVTQRSHVVQQAIRQAAGDMRLMNPVSLVENHSACRTNRAGQRVLPNG
QVWKPHLLLLSFASKILAEANTLLKLQDGPPGKPFATRSRAPPLPFLLSSLLQSRPQLKLPEEQ
FGSDDDAFDEDLDEASDSDEDSEYDELPPFKRLTKAQLAKLSKAQKKAYFDELEYREKLFMKKQ
LKDERKRRKLLKKMTDLAKDLPSEYSESAEEESGGAASVPVPMPDLSLPASFDSDNPTHRYRFL
DSSNQWLVRPVLDTHGWDHDVGYEGINVERLFVIKEKIPLSFSGQVTKDKKEANVQMELAGSVK
HGEGKATSLGFDMQTVGKDMAYTLRSETRFSDFRHNKMAAGLSVTHLGDAVSAGVKVEDKLIVN
KRFRMVLTGGAMTGRGDVAYGGSLEATLRDKDYPLGRTLTTLGLSIMDWHGDLAIGCNVQSQLP
LGRSSNVIARANLNNRGAGQVSIRLNSSEQLQIALIGLIPLFRKLVGYSQQLPFGQ

### Similar gene clusters

### NC_056559 - Cluster 20 - Alkaloid

### Gene cluster description

Download cluster GenBank file
NC_056559 - Gene Cluster 20. Type = alkaloid. Location: 27305535 - 27436472 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056559 - Cluster 21 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_056559 - Gene Cluster 21. Type = cyclopeptide. Location: 27744929 - 28577238 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122074599
Repeat occurs 3 times in a sequence of 490 amino acids
Location between 27756404 and 27758531
Coverage of 3.67 %
Instances:
APTGGS | APTGGS | APTGDT |
pattern: APTG[GD][TS]
MMGSRSRDVVLTCLLIGLLLWRVDARAPGGPKDHKKKPHQSKAKGQEAAEAPTGGSTSSTAPV
ASPAMPGNAAPAGAPTGGSASSTAPVASPATPGAAAPAGAPTGDTEAPQGTLFDVTKHGAVGDG
KTDNNKAFSDAWVAACKSSSTGPSTFLIPRGDFLLSTIVFAGPCTNKTLSPSVIIRGNLIASTT
DSNSKSWITFQSLSNLHISGAGTGSFNGKGETAWSGGCRHTANSHCNVAPANLNVQSVLSGSLN
DITSVNSQGFHILVGNTQDFNIHDVKINAPKFSPNTDGIHVGNSTGITIANAEIGTGDDCVSIG
SGTSKISVTNVKCGPGHGISLGSLGKYPDEKAVSSLLVKNCTLTSTDNGVRIKTWPGSPDNIVN
DVRFEDITMTNVSNPIIINQNYCDKKACDSTPSHVKLSGIHFKNIKGTSFTKTAVALGCSSGAP
CEQVELVDIDLKPATDAGAVDATCANVKGVITSGVLNPKPSCV

Repeat found in LOC122074600
Repeat occurs 3 times in a sequence of 474 amino acids
Location between 27769284 and 27771212
Coverage of 3.8 %
Instances:
TPEASP | TPEASP | TPEASP |
pattern: TPEASP
MMGCRSRDVVLTCLLIGLLLWSADARTPGGSKESKENKKKSTLSKDKAPKAAKAPMESSGSVP
SAATPEASPNTPEASPATPEASPVTPGTADPQGTLFDVTKHGAVGDGKTDNNKAFAAAWAAVCK
SSSTGPSTFLVPRGDFLLSPIIFAGPCSDKALSPSVIIRGKLIASTSDSSASKSWITFQNLGQL
HVSGAGTGSLDGKGETAWANACRHSANKQCSLPPANLKLEGITGGSLNDIISVNSQGFHFHISN
SKDFNIHDFKINAPGFSPNTDGLHISNSASVSITNAEIGTGDDCVSIGAGTSNISVTNVICGPG
HGISVGSLGKYPNEKEVNGLLVKNCTLASTTNGVRIKTWPGSPDNTVTNVRFEDITLTNVSNPI
IINQNYCDKKACESTPSRVKLTDIHFKNIKGTTFGKTGVTLTCSKGVPCEKVELVDIDLKPSTA
AGDLASTCENVNGVTTTGVLNPKPPCA

Repeat found in LOC122073874
Repeat occurs 9 times in a sequence of 937 amino acids
Location between 27966135 and 28002531
Coverage of 12.49 %
Instances:
EEEEDGEEEEEEE | EEEDGEEEEEEEE | EEEEEEEEDNDEE | EEEEEEEDNDEEG | EEEEEEDNDEEGE
EEEEEDNDEEGEE | EEEEDNDEEGEED | EEEDNDEEGEEDI | EEEREDEAILLLS |
pattern: EEE[RDE][NEGD][NDGE][NDE][ANDE][NEGDI][NELGD][LDGE][LDGE][SEGDI]
MGEEKAETSGLQEAEVSVSASGMNLERDAEVVEEEEDGEEEEEEEEDNDEEGEEDIEDGEYTL
RFEGEMDPLDFTEDDAYGIQPYQQFERLEYEALAEKKRKALAQSQRDGSAKKPRQEMLGASIAE
IMEVMNYGMRRKSRKPRKRGRRKGSKNKLSPEVTRKLGDATLHYAFGRYEEAISVLKEVVRLAP
NLPDSYHTLGLVYNAIGDKKKALNFYMISAHLTPKDPSLWKLLFTWSIEQGNTGQARYCLSKAI
TADPEDINLRFDRALLHIELGDYQKAAESYEQILKRRPENVEALKMAAKMYQKCGQDERAVRIL
EDYLKDHQTQIDLDVANLLVAIHMKNNAHAEALQQIEHARLVYNRGEEFPLYLNVKAGICEVHL
GNLDKAEIIFRDLQKEHTDDHPKLISDVADSFMNLGQYESALKYYFLLEANGGNDHGFLHFKIA
QCYLSLNKRVQAIPFFQRGLHSMEGNIDARLTLASLLLEEEREDEAILLLSPPKNSESIVDKNS
TQSTHWWLNGKIKKLLARIYHARGMLEEFVNAIFSSVRETLFIETINQKVRNRKRLPRSVLLER
LKKGLGDRQADTDTVFHGFRPLAAASDLSKAARAKKSLQKKAALKEEKKAAALAAGLDWQSDDS
DDEPVEQAREPPLPNLLKDEEHYQLILDLSRALSSLRMYWEALEIINHTLRLAYNTLSVEKKEE
LRSLGAQIAYNTTNPTHGYDCARYIVQQHPYSFAAWNCYYKVISRLGYRLSKHSKFLYSMRCTY
ADCVPPMLISGHQFTMISQHQAATREYLQAYKLQPDNPLINLCVGSSLINLALGLRLQNKHHSL
AQGFAFLHNNLRICQNSQEALYNIARACHHVGLVTLAVSYYEKVLAICEKDYPIPKLPNEESSL
TEIQKPGYCDLRREAAYNLHLIYKQSGAFDLARQVLKDHCTP

Repeat found in LOC122073874
Repeat occurs 9 times in a sequence of 814 amino acids
Location between 27966135 and 28002466
Coverage of 14.37 %
Instances:
EEEEDGEEEEEEE | EEEDGEEEEEEEE | EEEEEEEEDNDEE | EEEEEEEDNDEEG | EEEEEEDNDEEGE
EEEEEDNDEEGEE | EEEEDNDEEGEED | EEEDNDEEGEEDI | EEEREDEAILLLS |
pattern: EEE[RDE][NEGD][NDGE][NDE][ANDE][NEGDI][NELGD][LDGE][LDGE][SEGDI]
MGEEKAETSGLQEAEVSVSASGMNLERDAEVVEEEEDGEEEEEEEEDNDEEGEEDIEDGEYTL
RFEGEMDPLDFTEDDAYGIQPYQQFERLEYEALAEKKRKALAQSQRDGSAKKPRQEMLGASIAE
IMEVMNYGMRRKSRKPRKRGRRKGSKNKLSPEVTRKLGDATLHYAFGRYEEAISVLKEVVRLAP
NLPDSYHTLGLVYNAIGDKKKALNFYMISAHLTPKDPSLWKLLFTWSIEQGNTGQARYCLSKAI
TADPEDINLRFDRALLHIELGDYQKAAESYEQILKRRPENVEALKMAAKMYQKCGQDERAVRIL
EDYLKDHQTQIDLDVANLLVAIHMKNNAHAEALQQIEHARLVYNRGEEFPLYLNVKAGICEVHL
GNLDKAEIIFRDLQKEHTDDHPKLISDVADSFMNLGQYESALKYYFLLEANGGNDHGFLHFKIA
QCYLSLNKRVQAIPFFQRGLHSMEGNIDARLTLASLLLEEEREDEAILLLSPPKNSESIVDKNS
TQSTHWWLNGKIKKLLARIYHARGMLEEFVNAIFSSVRETLFIETINQKVRNRKRLPRSVLLER
LKKGLGDRQADTDTVFHGFRPLAAASDLSKAARAKKSLQKKAALKEEKKAAALAAGLDWQSDDS
DDEPVEQAREPPLPNLLKDEEHYQLILDLSRALSSLRMYWEALEIINHTLRLAYNTLSVEKKEE
LRSLGAQIAYNTTNPTHGYDCARYIVQQHPYSFAAWNCYYKVISRKPCITLLEHVITLDLLHLL
CHIMRKCWQFVRRITLSQSFLMRNQALQKFRSQVIVTFAERLHTICT

Repeat found in LOC122074768
Repeat occurs 6 times in a sequence of 968 amino acids
Location between 28012438 and 28015422
Coverage of 3.72 %
Instances:
LDLSDN | LDLSYN | LDLAYN | LDLSFN | LDLSAN
LDLSHN |
pattern: LDL[AS][YADFH]N
MGYSIKLAFLCLIFFSSSASGSRVEVVHSQFSSEAEALLKWKATLPSYSLPALSSWKLTPPSP
NTTTTNTTTPSAAAAAISCKWFGITCNRAGSMVEISLPHLELQGTLDNFPFSSFPNLLRLDLSD
NGITGTIPVHIGSLSKLAHLDLSYNNLSNILPPLSNLSRLRFFFLHHNQINGTIPLEIGNMKNL
VKLALCWNEFTGMIPPVLTNLTNLSLLYLNHNELNGPIPSKIGDMENLVVLDLAYNKLCGLVPQ
SLANSSKLEILYLHENQLSGPLPQDLGGQPSIVSIQLSSNLLSGSLPQQICRGSLQYLSVRNNS
LMGTIPDFRNCTSLRRLRLDNNLLVGNITGSFGVHPHLYYIDVSHNRLYGELSPKWGECKNLSG
IKISGNNISGNIPPEFGHLTELGLLDLSFNKLVGEIPKALGGLSSLLSLYLNDNQISGHVPVEI
GNLINLEDLDLSANRLIGSIPKQLGQCSKLLSLNLSWNSLDGSIPSQIGDLVFLQDQLDLSHNS
ISGLIPPELAKLRMLEILNLSHNMITGSIPLSLEEMVSLVSLDFSYNELEGVVPNNRIFKNASP
QAFRNNKGLCGELQGLLPCPRPQTSNRSGKKGPKFFISIIASLIGIVFLAYAIIGVLILLREKV
KKENIEATRGNHGNIFSIWSYNGNIAYEDMIEATENFDAKYCIGTGTYGSVYKAVLPTGHVVAL
KKFHPLEGEIIVDEESFGNEIRILIDIRHRNIVKLYGFCSHPQCMFLVYEYMEKGSLASILSNQ
AEAMGLDWLKRVNVIKSVANALSYLHHDCVPPIIHRDISSKNILLDVELEARVSDFGIARLLKP
DSSNWISLKGTHGYIAPELAYTMALTEKCDVYSFGVVALETIMGRHPGELISSLSSLAGQKMLL
RDVLDPCLTFPSYQKVAKDMLAVVRVALACLRNHPQSRPTMHQVSKELLVPRSSFVEHFHTITL
GDLDDVEVL

### Similar gene clusters

### NC_056559 - Cluster 22 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_056559 - Gene Cluster 22. Type = saccharide. Location: 29191327 - 29395074 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056559 - Cluster 23 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_056559 - Gene Cluster 23. Type = cyclopeptide. Location: 33425384 - 34532904 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122074532
Repeat occurs 4 times in a sequence of 633 amino acids
Location between 33798937 and 33808945
Coverage of 5.69 %
Instances:
SFKSVKSFK | SFKESKSFK | SFKTSYSFK | SFKSSRCGD |
pattern: SFK[TSE][SV][RKY][SC][FG][KD]
MKQPQKKQAELLWPRVILKKWLNLSSNESDFSADPDEGDSSSDSDDEEFFCWGQDSFSKKGAP
ETRPKRRRRNSETIRAQYIKAKELRICVGTWNVGGKLPPDDLDISEWLETDEPADMYVIGLQEI
VPLNAGNIFGSEDSRPVPKWECIIRETLNRIQHEKPKYKCYSDSPSPSRFKASDDVRDIEDEIL
TETDSDGDEEVYPLDEEFSDSNEVKNGTTTSENEFIRSEALNSTENADIVSSEEHDIQRQFSSP
KKLDRLNCFRTEDSMENPEPSVPQQKGILSKTLSRTERIGLSWPEPPMDLLAKHVLERPNSFKS
VKSFKESKSFKTSYSFKSSRCGDYRGASETALLADIDLETIIRRKRSPFVKLVSKKMVGIFVSI
WVRRSLRRHIRNLKVSTVGVGVMGYIGNKGSVSVSMSIYQTLFCFISSHLTAGEKEGDEHKRNT
DVHEIHRRTHFNPVSGIGFPKNILDHERVIWLGDLNYRINLSYEKTRELISKKEWSKLIERDQL
IRELRKGRAFDGWSEGTLNFPPTYKYEFNSEKYYGEDPKAGRRNPAWTDRILSFGNGMKLLNYK
RAEHTLSDHRPVTAIYMAEVEEFCHRKLQKALTFTDAELEDEVIADMELDVGMSRLRF

Repeat found in LOC122074532
Repeat occurs 4 times in a sequence of 633 amino acids
Location between 33798937 and 33808945
Coverage of 5.69 %
Instances:
SFKSVKSFK | SFKESKSFK | SFKTSYSFK | SFKSSRCGD |
pattern: SFK[TSE][SV][RKY][SC][FG][KD]
MKQPQKKQAELLWPRVILKKWLNLSSNESDFSADPDEGDSSSDSDDEEFFCWGQDSFSKKGAP
ETRPKRRRRNSETIRAQYIKAKELRICVGTWNVGGKLPPDDLDISEWLETDEPADMYVIGLQEI
VPLNAGNIFGSEDSRPVPKWECIIRETLNRIQHEKPKYKCYSDSPSPSRFKASDDVRDIEDEIL
TETDSDGDEEVYPLDEEFSDSNEVKNGTTTSENEFIRSEALNSTENADIVSSEEHDIQRQFSSP
KKLDRLNCFRTEDSMENPEPSVPQQKGILSKTLSRTERIGLSWPEPPMDLLAKHVLERPNSFKS
VKSFKESKSFKTSYSFKSSRCGDYRGASETALLADIDLETIIRRKRSPFVKLVSKKMVGIFVSI
WVRRSLRRHIRNLKVSTVGVGVMGYIGNKGSVSVSMSIYQTLFCFISSHLTAGEKEGDEHKRNT
DVHEIHRRTHFNPVSGIGFPKNILDHERVIWLGDLNYRINLSYEKTRELISKKEWSKLIERDQL
IRELRKGRAFDGWSEGTLNFPPTYKYEFNSEKYYGEDPKAGRRNPAWTDRILSFGNGMKLLNYK
RAEHTLSDHRPVTAIYMAEVEEFCHRKLQKALTFTDAELEDEVIADMELDVGMSRLRF

Repeat found in LOC122074532
Repeat occurs 4 times in a sequence of 629 amino acids
Location between 33798937 and 33808945
Coverage of 5.72 %
Instances:
SFKSVKSFK | SFKESKSFK | SFKTSYSFK | SFKSSRCGD |
pattern: SFK[TSE][SV][RKY][SC][FG][KD]
MKQPQKKQAELLWPRVILKKWLNLSSNESDFSADPDEGDSSSDSDDEEFFCWGQDSFSKKGAP
ETRPKRRRRNSETIRAQYIKAKELRICVGTWNVGGKLPPDDLDISEWLETDEPADILQEIVPLN
AGNIFGSEDSRPVPKWECIIRETLNRIQHEKPKYKCYSDSPSPSRFKASDDVRDIEDEILTETD
SDGDEEVYPLDEEFSDSNEVKNGTTTSENEFIRSEALNSTENADIVSSEEHDIQRQFSSPKKLD
RLNCFRTEDSMENPEPSVPQQKGILSKTLSRTERIGLSWPEPPMDLLAKHVLERPNSFKSVKSF
KESKSFKTSYSFKSSRCGDYRGASETALLADIDLETIIRRKRSPFVKLVSKKMVGIFVSIWVRR
SLRRHIRNLKVSTVGVGVMGYIGNKGSVSVSMSIYQTLFCFISSHLTAGEKEGDEHKRNTDVHE
IHRRTHFNPVSGIGFPKNILDHERVIWLGDLNYRINLSYEKTRELISKKEWSKLIERDQLIREL
RKGRAFDGWSEGTLNFPPTYKYEFNSEKYYGEDPKAGRRNPAWTDRILSFGNGMKLLNYKRAEH
TLSDHRPVTAIYMAEVEEFCHRKLQKALTFTDAELEDEVIADMELDVGMSRLRF

Repeat found in LOC122074558
Repeat occurs 5 times in a sequence of 988 amino acids
Location between 34390002 and 34394939
Coverage of 4.55 %
Instances:
SWNSIISVY | SWNSMISGL | SWNSMIGAF | SWNSMIAGY | SWNSMISGY
pattern: SWNS[IM]I[ASG][AGV][FLY]
MVWFLIMITNLNPWAVMHMVNPTTSWDSCTLLLGVLIPCSHVPRTCRTLQLRAAQRSAVRRSE
LSVSAADQGLADEACRLFRSMLYAGFVPTHYVLGNALRACQDSGPCGLQFGMQIHALVLKSQYA
SDVVVCNGLISMYGSCCLDLAVYAHRVFDGIQLKNSISWNSIISVYSHRGDAFSAFGLFSAMQR
EGLGVSFKPSEYTFGSLITAAYSTPSDAGFFLLEQIVNRVTKSGFLSDLYVGSALVSGFARFGL
LDNAKKIFEQMSERNAVSMNGLMVGLVRQKRGEEAAQVFCETSDLVGINCDSYVILLSACAEFL
VPIEGRRKGREVHAYVLRTGLNEIKVAIANGLVNMYAKCGAIANASRVFKLMGVKDLVSWNSMI
SGLDQNGCFREAVRSFCEMRRSGLIPSNFTLISTLSSCASLGCIQLGAQIHSEGIKLGLDLDVS
VSNSLLGLYAETGSIIDCQKVFSLMPGYDQVSWNSMIGAFADSDASISGAIEYFLNMMRSGWSP
NRVTFINVLAAVSALSIHELGQQVHALALKYCVADDIAIENAFLSCYGKCGEMDDCEKIFSSMF
ARRDEVSWNSMIAGYIHNGHLPKAMDLVWFMMQRGQRLDCFTFATVLSACASVAALERGKEIHA
CGIRACLETDVVVGSALVDMYAKCGRIDYASRAFRLMPMKNEFSWNSMISGYARHGIGVKALQL
FSEMLQEGQPPDHVTFVGVLSACSHVGLVDEGLEHFESMSNKYGLVPRMEHYSCMVDLLGRAGQ
LTMVEEFVKRMPMKPNILMWRTILGACCRVNGANTELGRHAAEMLLALEPQNAVNYVLVSNMNA
FGGRWDDVAKARAAMREAAVKKEAGCSWVTMKDGVHVFVAGDKSHPDTEKIYEKLLDMNRKMRD
LGYVPQTKFALYDLEVESKEELLSCHSEKLAVAFVLIRTSALPIRIMKNLRVCGDCHSAFGYIS
KIVGRQIVLRDSNRFHHFNDGKCSCGDYW

### Similar gene clusters

### NC_056560 - Cluster 24 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_056560 - Gene Cluster 24. Type = cyclopeptide. Location: 9960990 - 10326087 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122075489
Repeat occurs 4 times in a sequence of 742 amino acids
Location between 10315493 and 10317722
Coverage of 3.23 %
Instances:
QIHGHV | QIHGYI | QIHCYL | QIHATL |
pattern: QIH[AGC][THY][ILV]
MIRDYTANGLFKDAIGVYLKLLNFGILTQQLPFFPSLIKAFAGLLDLRMGQQIHGHVLKFGLL
TDVYVANSLLAMYWKCGALEDALHLFENILNRDSVSWNTMISGFDQSVMPLQALVMFRRMVREL
GAIPNRVACLSALSSCSSCGSLLHGKEIHAFVTKNGLDLDPSLVNEMIGMYMKCGHLRNAEHVF
GILLEREHLRENTLIWNAMISGYVFNGCFWDAFALFQKMLMLGINLDSSTMVTVLVLCSQLLDL
KVGRQIHGYIVCVGLKLNARIETAILDMYCKCGEIQDGLNVFERSSNMNFVMWGAIIAGCAQNG
LSTKALELFSKSRVEGGLVDPITVLAVLRACSSLSLMLNGMETHGLAIKMGFSSDVFIGGALTD
MYAKCGDIESSQRIFLGLSARDVISWNALVSGYAQNDYADKALKAFRNMQYELVRPNTVTFASI
LSVCARLSALILCKQIHCYLIRNRFDANVLVSNSLISAYARCGDISSALIIFNGISERNEISWN
SMIAGLGIHGHMDDMLALFDKMKAADIKPDHVTFTAILSACSHAGRVDEGWRHFRSMVKDYNLK
PELEHYTCMVDLLGRAGHLDQAFNMIMDMPCQPDGHIWGSLLASCKIHCNAEMAERAANHLFKL
DSSSMGYQILLSNIYEDFGRWDNVSRIRTAIKDMGLKKNPGCSWIEVNHKLHVFVAKDRSHYQS
EQIHATLEILTKDITGAGYIPQSYPLSIQHDETSGEGII

### Similar gene clusters

### NC_056560 - Cluster 25 - Fatty_acid

### Gene cluster description

Download cluster GenBank file
NC_056560 - Gene Cluster 25. Type = fatty_acid. Location: 14940103 - 15037423 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056561 - Cluster 26 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_056561 - Gene Cluster 26. Type = cyclopeptide. Location: 3557161 - 4064220 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122079721
Repeat occurs 5 times in a sequence of 943 amino acids
Location between 3640829 and 3643661
Coverage of 3.18 %
Instances:
RPRKDV | RPRKNV | RPRKEK | RPRKEK | RPRKKK
pattern: RPRK[NKED][KV]
MEKGFLIAEESLCKKGKDKAASVGLKRNQGGIKTKTKSTAREGQGLKSFTGDQDVPGVTVSTF
DYSVESHFRAIDMILKLCGEVGEEALGMCDIKQLTAAITFLREWKHFCYKPRVIRFSCETGSPH
GENVINGINLPQFSSVTVPKTTSISEDSRSFQSTSPCDKDFVLYVGGPVWALDWCPRVCQSSDC
NISCEYLAVAAHPPESPYHKVGAPLVGRGLIQIWCLLNVNVEEEGLPPLNKRKGRPRKDVSRES
TPLRKPRGRPRKNVSEESNPLKKPRGRPRKEKLLEETPLKKARGRPRKEKVSEESLPLKILSSR
PRKKKAIEDSDDINSISQFVPALAVEFPEYSAQFPANSGVGMHTNENAMLKGCETDAVFGTGPQ
ECFNHQLSTSKANVKTPQQKKRTKEKARLGSNSDGGCQSLSNRNEDKELSAAVLPANNRSMQLL
AAPSQNVPYDGSLDAVSTCLPKDVAFPRLVLCLAHNGKVAWDVKWRPSDINDLASKHRMGYLAV
SLGNGSVEVWDVPSLSAIKILYSSCYKEGTDPRFMRLEPVFRCSKLKFGDRQSIPLTLEWSPSF
PHDLILAGCHDGTVALWKFSARHSSEDTRPLLCFSADTVPIRALAWAPNENDPESANVIVTAGN
GGLKFWDIRDPYHPLWDLSYVRRAVCSLDWLANPNCVILSFDDGTLRILSLLRAAYDVPVTGKP
FVGTQQQGLNSYYCSPFSIWSVQASRLTGLVAYCSADGNVLHFQLTAKAVEKDPLRNRAPHFLC
GSLTEENSTLTVHTPLPHVPFPMKKSLNEYADTPRSIRGFVSLANQAKRVNDQRVDYQNPALCY
EDNSIVGVEPENALAGPNSRAAKRKTSKKKKPDPNQESIAEGLENFPRGDNEKGETRSEVEVLP
HKDIAMHRVRWNMNKGSERWLCYGGAAGIVRCQQIDVSCVAKRKDIKK

Repeat found in LOC122079721
Repeat occurs 5 times in a sequence of 943 amino acids
Location between 3640829 and 3643661
Coverage of 3.18 %
Instances:
RPRKDV | RPRKNV | RPRKEK | RPRKEK | RPRKKK
pattern: RPRK[NKED][KV]
MEKGFLIAEESLCKKGKDKAASVGLKRNQGGIKTKTKSTAREGQGLKSFTGDQDVPGVTVSTF
DYSVESHFRAIDMILKLCGEVGEEALGMCDIKQLTAAITFLREWKHFCYKPRVIRFSCETGSPH
GENVINGINLPQFSSVTVPKTTSISEDSRSFQSTSPCDKDFVLYVGGPVWALDWCPRVCQSSDC
NISCEYLAVAAHPPESPYHKVGAPLVGRGLIQIWCLLNVNVEEEGLPPLNKRKGRPRKDVSRES
TPLRKPRGRPRKNVSEESNPLKKPRGRPRKEKLLEETPLKKARGRPRKEKVSEESLPLKILSSR
PRKKKAIEDSDDINSISQFVPALAVEFPEYSAQFPANSGVGMHTNENAMLKGCETDAVFGTGPQ
ECFNHQLSTSKANVKTPQQKKRTKEKARLGSNSDGGCQSLSNRNEDKELSAAVLPANNRSMQLL
AAPSQNVPYDGSLDAVSTCLPKDVAFPRLVLCLAHNGKVAWDVKWRPSDINDLASKHRMGYLAV
SLGNGSVEVWDVPSLSAIKILYSSCYKEGTDPRFMRLEPVFRCSKLKFGDRQSIPLTLEWSPSF
PHDLILAGCHDGTVALWKFSARHSSEDTRPLLCFSADTVPIRALAWAPNENDPESANVIVTAGN
GGLKFWDIRDPYHPLWDLSYVRRAVCSLDWLANPNCVILSFDDGTLRILSLLRAAYDVPVTGKP
FVGTQQQGLNSYYCSPFSIWSVQASRLTGLVAYCSADGNVLHFQLTAKAVEKDPLRNRAPHFLC
GSLTEENSTLTVHTPLPHVPFPMKKSLNEYADTPRSIRGFVSLANQAKRVNDQRVDYQNPALCY
EDNSIVGVEPENALAGPNSRAAKRKTSKKKKPDPNQESIAEGLENFPRGDNEKGETRSEVEVLP
HKDIAMHRVRWNMNKGSERWLCYGGAAGIVRCQQIDVSCVAKRKDIKK

Repeat found in LOC122080223
Repeat occurs 7 times in a sequence of 152 amino acids
Location between 3927309 and 3928284
Coverage of 69.08 %
Instances:
KKEEPKKEEPKKEEP | KKEEPKKEEPKKEEP | KKEEPKKEEPKKEEP | KKEEPKKEEPKKEEK | KKEEPKKEEKKEDPI
KKEEKKEDPIAELIQ | KKEDPIAELIQLMKE |
pattern: KKE[DE][KP][IK][AKE][DE][LPE][IKP][AKQ][LKE][LDME][IKPE][QEPKI]
MKKVVVKVEVYDAKSKLKAMRAVSSVSGINSISVDMEKHLMTVIGEVDPVDIVGKLRKFWQHT
VIDFVGPPEEPKKEEPKKEEPKKEEPKKEEPKKEEPKKEEKKEDPIAELIQLMKERHESGHPYN
IPYGTTYYSLKDVSDTNPNTSCVIS

Repeat found in LOC122080223
Repeat occurs 7 times in a sequence of 133 amino acids
Location between 3927791 and 3928284
Coverage of 78.95 %
Instances:
KKEEPKKEEPKKEEP | KKEEPKKEEPKKEEP | KKEEPKKEEPKKEEP | KKEEPKKEEPKKEEK | KKEEPKKEEKKEDPI
KKEEKKEDPIAELIQ | KKEDPIAELIQLMKE |
pattern: KKE[DE][KP][IK][AKE][DE][LPE][IKP][AKQ][LKE][LDME][IKPE][QEPKI]
MRAVSSVSGINSISVDMEKHLMTVIGEVDPVDIVGKLRKFWQHTVIDFVGPPEEPKKEEPKKE
EPKKEEPKKEEPKKEEPKKEEKKEDPIAELIQLMKERHESGHPYNIPYGTTYYSLKDVSDTNPN
TSCVIS

### Similar gene clusters

### NC_056561 - Cluster 27 - Fatty_acid-alkaloid

### Gene cluster description

Download cluster GenBank file
NC_056561 - Gene Cluster 27. Type = fatty_acid-alkaloid. Location: 8661604 - 8866671 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056561 - Cluster 28 - Alkaloid

### Gene cluster description

Download cluster GenBank file
NC_056561 - Gene Cluster 28. Type = alkaloid. Location: 9789812 - 9883026 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056561 - Cluster 29 - Transporter_associated

### Gene cluster description

Download cluster GenBank file
NC_056561 - Gene Cluster 29. Type = transporter_associated. Location: 11970253 - 12447568 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/transporter_associated: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[MatE/LTP_2/ABC2_membrane/ABC_tran]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056561 - Cluster 30 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_056561 - Gene Cluster 30. Type = saccharide. Location: 22646167 - 22757068 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056561 - Cluster 31 - Fatty_acid

### Gene cluster description

Download cluster GenBank file
NC_056561 - Gene Cluster 31. Type = fatty_acid. Location: 29785219 - 29884368 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056562 - Cluster 32 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_056562 - Gene Cluster 32. Type = saccharide. Location: 16635720 - 16908032 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056562 - Cluster 33 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_056562 - Gene Cluster 33. Type = cyclopeptide. Location: 20778621 - 21582324 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122081347
Repeat occurs 3 times in a sequence of 442 amino acids
Location between 21258399 and 21259805
Coverage of 4.07 %
Instances:
EPGGEE | EPGSDQ | EPGSNK |
pattern: EPG[SG][NDE][KQE]
MLLKFNFSINSINVVQDHYFADSKYSLRETNMLEDTDGNFQGYTDLACTVQPQEIKANRTEQE
QTRERVSRPIYIDLDEFRNKTMQGKREVQSQVGNITHRLEPGGEEYNYASSSKGAKVLTNNKEA
RGANNILGRDQDKYLRNPCSVEHKFVVIELAEETLVDAFKIANFEHYSSNFKDFELSGSLSFPT
ETWTPLGNFVAANVKHAQRFMLLEPKWVRYLRLSLLSHYGSEFYCTLSLLEVYGVDAIERMLQD
LIVVSEEPGSDQSLNHTSSIGTKSSIKEPGSNKRDVSSQVQIAVDAVGKGLDNIDDGQRPNIEV
TKNTVSNSNIPNPVLEARHQNNGRIPSDTVLKILMQKMKSLELNLSVLEEYIKQLNRSQRDVLP
ELDKEISRCALLMEKVKSEIKGLIEWKEITEKGINELEWWKSVVVYRIDALERENRMLR

Repeat found in LOC122080856
Repeat occurs 9 times in a sequence of 437 amino acids
Location between 21369578 and 21372743
Coverage of 12.36 %
Instances:
PPNLTV | PPNNSS | PPNNST | PPNTSS | PPNNST
PPNTSS | PPNNST | PPNTSS | PPNNST |
pattern: PPN[NLT][TS][TSV]
MKSLAIVAYGLSLVVLINYTCLCSDLQMGYYKGKCPDNKTDVEDIVKSSIASQYALDATTSPA
LIRMQFHDCFVRGCDASILLDGNKTEKNAPPNLTVRGYDVIDKAKSDVEDKCPGVVSCADIIIM
AAREAVVLGGGDYYNVTLGRRDGQHSNITEAVLLLPAADISVGDSIAAFSALGIEVSDMVALIG
AHTVGVAHCSSFKDRLYNFNNTGMADPTMDEALLNSLKSTCPQNSTDDNFANLDQNSLSANTVD
NSFFMQIQKGKGLLGIDQEIDLDTRTNGTVQQFANSNTLYTGQLGIAMIKLGDVNVLTAPLGEI
RTSCRYTNADYSAPPPPPSCNHSSTPPSNSSAPANSSTTPPNNSSPPPNNSTTPPNTSSPPPNN
STTPPNTSSPPPNNSTTPPNTSSPPANSSSTPPNNSTTPPTNSSSPPTNSSSPT

### Similar gene clusters

### NC_056562 - Cluster 34 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_056562 - Gene Cluster 34. Type = cyclopeptide. Location: 24580466 - 25168949 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122081493
Repeat occurs 3 times in a sequence of 327 amino acids
Location between 24608885 and 24611443
Coverage of 5.5 %
Instances:
IRVHEL | IRVKNK | IRVNHK |
pattern: IRV[NKH][NHE][KL]
MVKVIRVHELGESEVLKWEDVEIGEPKEGEIRVKNKAIGVNFIDVYFRKGVYKAPTMPFTPGM
EAVGVVTAVGPGLTDRKVGDVVAYAGTPMGSYSEGQILPAKVVVPVPPSIDPILAACIMLKGMT
AEYLVRRCFKVESGHTILVHAAAGGVGSLVCQWANALGATVIGTVSTAEKAVQAKEDGCHHVIN
YKEEDFVEAVKKITSGGGVHVVYDSVGKDTFEGSLACLRSRGYMVNFGQASGTPDPLPLSALAV
KSVFLTTPSLMLYNETRDELLESAGEVFANVESGVLRIRVNHKYPLAQAAQAHADLESRKTSGS
IVLIPNSE

Repeat found in LOC122080930
Repeat occurs 3 times in a sequence of 299 amino acids
Location between 24776219 and 24777344
Coverage of 6.02 %
Instances:
RSSPSE | RSSKNR | RSSKEE |
pattern: RSS[KP][NSE][RE]
MVFREIYNAEEALRSISMATAPVKSQPLHNFSLPFLKWGKNQMNNYRCRKLVDPSRDSPPPDH
RSSPSEAESETAAASSYKKDSEAENRKYPIGSRSSKNRFGFSSSAASTTEKLLKNTAASEADAV
GLEESKGKLFIRFSRSSKEEPASKNKGAAVAADCGGEVGGEVEESALKPWNLRPRRAVFKAPIE
IGGPSKNGDSLDDLPPMPQPEHLPKSLRLRGFAEVQNVEKKEKRQFSISLSRGEIEEDIFALTG
SKPSRRPKKRPKNVQKQVDNVFPGMWLSEITADSYKVPDAPTKR

The following known motifs were found in CDS LOC122082170
Location between 24854279 and 24869474
.L.Y..Y was found 2 times in this sequence
Sequence:
MLWISDVVSIIIGSSIYYVGIFGKEREDEDFHLLEPLLKSSSNRNHDVDIQGSSGGGESITSY
ANANLLSFLTFSWMSPLVALGYKKTLDLEDVPQLSNCDSANMVFSCFRNKIESDSKNGGQVSSL
KLMKALILLTWKEILWTGLLSIVCTLASYVGPYFIEAFFQYLKSSRQLKYEGYVLVFIFFLSKL
IRCFSERHLFFQLRKMGNRVRTALFAIIYKKNLSLSSQAKQGHTSGENVNLMTVDVEKTGFFSW
YLHDIWRVPVQFILALLNLYKRLGLASLVAFAVTMILMLANAPLVKLQEKIQGKLMDSKDRRMK
VTSEALRNMRILKLQGWEMKFLSKIIERRKFEMKWLKKLLYTSAMASFVYSSTPLFVSMATFGS
CELMGIQLDAGKILSALATFQMLQGPIYNLPDTISMILQIKVSLDRITTFLCLDDFDKNIVQKL
PRDSTEVAVEIVKGNFSWDIHSPNLTLQDLNFQVKHGMKVVICGSVGSGKSSILSCILGEVPKV
SGAIKLKGTTAYVAQTPWIQSGKIVDNILFGKEMDKERYEMILEACSLKKDLELFAFGDQTIIG
ERGINLSGGQKQRIQIARALYHDADIYLLDDPFSAVDAHTGTHLFKECLLGILGSKTVIYVTHQ
VEFFPSADLILVMKGGKITQAGKYEEILSSGTDFMELVGAHKKALAKLNSIGHGAALDNLINDK
EVDNMLCSENSNQDDEVIESNNYKIEKLIEPKGQLVQEEKREKGGVNPLLYLKYVTTAYKGAFV
PWILLAQILFELLQIVSSYWMVLDNPDSGEDVRPHVMGSTLIFIYVALTFGSSLCTLIRSMLIV
TAGYKTSTLLFNKMHLCIFRAPMSFFDSTPSGRILNRVSIDQSAVDTSIPHKFEELLISIIGFL
GTIAVMSQVAWQMLIVSIPMTVACIWYQILMRKFPRLKRLVPVEKTIGGVATSLSTKGVWFQIV
EVESTKDFVTLKIMASVPNSLGRMVRNSHEEYGKYQGV

### Similar gene clusters

### NC_056562 - Cluster 35 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_056562 - Gene Cluster 35. Type = cyclopeptide. Location: 26867360 - 27509910 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122082881
Repeat occurs 3 times in a sequence of 256 amino acids
Location between 27068691 and 27076765
Coverage of 12.89 %
Instances:
FRTVCNRGKCG | FRTTCNMKKCG | FRTVCNRKGCG |
pattern: FRT[TV]CN[RM][KG][KG]CG
MASAKVDNRGSLGSKRSRNDGTRNDGDWTCPQCGNVNFSFRTVCNRGKCGAARPPSTPQRMGS
APVPSPFNNAPPYYLGGVGAPPPMPLGMPSSYGLPFSLSGMRYDYGAHGSATGPYGLMSAYPPG
PLGGVAYGPGSALDGYGFGYRGSPLPMPGSWSGGGLPDNSASRKRRGGPDGLSEGDWVCPKCDN
VNFAFRTTCNMKKCGAPRPSSGPNQSDSGVPEGSWTCSKCENLNYPFRTVCNRKGCGNEKPATA
K

Repeat found in LOC122082881
Repeat occurs 3 times in a sequence of 255 amino acids
Location between 27068691 and 27076765
Coverage of 12.94 %
Instances:
FRTVCNRGKCG | FRTTCNMKKCG | FRTVCNRKGCG |
pattern: FRT[TV]CN[RM][KG][KG]CG
MASAKVDNRGSLGSKRSRNDGTRNDGDWTCPQCGNVNFSFRTVCNRGKCGAARPPSTPRMGSA
PVPSPFNNAPPYYLGGVGAPPPMPLGMPSSYGLPFSLSGMRYDYGAHGSATGPYGLMSAYPPGP
LGGVAYGPGSALDGYGFGYRGSPLPMPGSWSGGGLPDNSASRKRRGGPDGLSEGDWVCPKCDNV
NFAFRTTCNMKKCGAPRPSSGPNQSDSGVPEGSWTCSKCENLNYPFRTVCNRKGCGNEKPATAK

Repeat found in LOC122081262
Repeat occurs 3 times in a sequence of 398 amino acids
Location between 27408138 and 27425061
Coverage of 6.78 %
Instances:
MSMSMSMEE | MSMSMEEEQ | MSMEEEQPK |
pattern: MSM[SE][ME][SE][QME][PE][KQE]
MSMSMSMEEMSMSMSMEEEQPKSRGKPIRCRAAVCRKAGEPLQIEEVEVAPPKAWEVRIKIIC
TSLCHTDVTFWKMESPPATFPTIFGHEAVGVVESVGENVKEVREGDTVIPVLLTDCQDCGDCNS
KKSNKCSRFPFMVSPSLPRDGTTRFTDSQGEVVNHFAYISSFSEYTVVDIANVTKIDPSIPPNR
ACLLGCGISTGIGAAWKTANVEAGTSVAIFGLGAIGLAVAEGAGIRGATKIIGVDLNPEKFEIG
KKFGVTDFINPSDCGNKPVHEVIAEMTDGGADYCFECVGSTSVAHQAFARCRKGWGKTILIGFE
MPSSQLSFSSYEVLVSGKTIMGSLLGDFKPKTDIPLLVKSYLDKELRLDDFVTHEVQFEDINKA
FDLLISGKSIRCVIWMDKKFPPPI

### Similar gene clusters

### NC_056562 - Cluster 36 - Alkaloid

### Gene cluster description

Download cluster GenBank file
NC_056562 - Gene Cluster 36. Type = alkaloid. Location: 28503541 - 28661211 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### Similar known gene clusters

### NC_056562 - Cluster 37 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_056562 - Gene Cluster 37. Type = saccharide. Location: 34087307 - 34154250 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056563 - Cluster 38 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_056563 - Gene Cluster 38. Type = cyclopeptide. Location: 4433969 - 5366052 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

No repeats detected in this cluster.

### Similar gene clusters

### NC_056563 - Cluster 39 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_056563 - Gene Cluster 39. Type = cyclopeptide. Location: 11538261 - 12047513 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122084744
Repeat occurs 5 times in a sequence of 640 amino acids
Location between 11930051 and 11935437
Coverage of 5.47 %
Instances:
PTQIGNL | PTQIGNL | PTQIGNL | PTQMGKL | PTQLVAQ
pattern: PTQ[ILM][GV][ANK][LQ]
MASFTALLVMEIIVVVVWVAASFTIVRPLATIAVASESAAAAEANALLNWKASGSNFPDSWNA
NDTSPCKWEGIACNTAGRVSEINLHSYSLNADLGILNLKGLQLGSNMISGPIPTQIGNLSNLTE
LDLNNNEFTGSIPSQIWNLRNLERLELGSNLLSGSIPTQIGNLRNLMQFGLGSNMFSGSIPTQI
GNLRDLNELNLSGNKFTGSIPMEIGYLERLTRLYLAHNNLSGLIPTQMGKLHIDSLDLDMRYND
FEKKIEKKLKLKIPIIISLSSIIILVAFVIVIVWFLFKQKSINSITDATRTQKNGDIFSIWNYD
GTIAYSDIMEATEEFDIKYCIGTGGYGSVYRAMLPTGKVVAVKKLHRIEAEEKAYEKSFTNEIH
VLTRIRHRNIVKLYGFCSHPRCNFLVYEYIERGSLAYVLGNEAEAVELNWRKRINVIKGTAHAL
SYLHHDYIPALIHRDISSNNVLLDANLEPHVADFGTSRFLNPNSSNRTIPAGTYGYIAPELAYT
MVVTEKCDVYSFGVLTLEIIMGKHPAELISSLSSPNAEDIMLNDVLDPRPPPPTQLVAQDLNVS
MMLGIACLHTNPKSCPSMQYVSQKLRSSTDLIAVLLYKFIVAIRHMKIKPNPLSYMEMVHPLLR
Y

### Similar gene clusters

### NC_056563 - Cluster 40 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_056563 - Gene Cluster 40. Type = cyclopeptide. Location: 14399246 - 17038712 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NC_056563 - Cluster 41 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_056563 - Gene Cluster 41. Type = cyclopeptide. Location: 17388259 - 18315061 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122085213
Repeat occurs 3 times in a sequence of 400 amino acids
Location between 17885382 and 17888387
Coverage of 9.75 %
Instances:
SMKQAKELQKKLV | SMKQAKELRKKLA | SMKQAKELRKKLA |
pattern: SMKQAKEL[RQ]KKL[AV]
MEDPEDQMTIAQFSKTRQQLPPPHTLKRKRNAWRKRNPNLLRFWNSSPPLSSPNHNQVVPDQG
EKNRSRRRMYWSSVGANSCSMKQAKELQKKLVPEKMPTCVKFMCPTYVGSYFWMRLPLDFCKLN
LPKEDCVITLVDENCEEYETKYIPGRAVLSGGWRAFSVAHKLVPKDTVLFQLIKATKLKVYILR
EKVAKKVILNTSSDGSNSHSMKQAKELRKKLALEKMPLSSDAANSHSMKQAKELRKKLALEEMP
TCMKFIRPSHVSGCFWLRLPVDFCKLNLPKEDCIITLVDERGEEYEMKYVAERVGIGGGWRAFS
VAHKLVPKDTVLFQLIKATKFKVYILRENVAKKETLTEEDNVDEGASHHLSDLQKKNQNAIPPG
STYNPGPPAGEQFENES

Repeat found in LOC122085213
Repeat occurs 3 times in a sequence of 399 amino acids
Location between 17885382 and 17888387
Coverage of 9.77 %
Instances:
SMKQAKELQKKLV | SMKQAKELRKKLA | SMKQAKELRKKLA |
pattern: SMKQAKEL[RQ]KKL[AV]
MEDPEDQMTIAQFSKTRQQLPPPHTLKRKRNAWRKRNPNLLRFWNSSPPLSSPNHNQVVPDQG
EKNRRRRMYWSSVGANSCSMKQAKELQKKLVPEKMPTCVKFMCPTYVGSYFWMRLPLDFCKLNL
PKEDCVITLVDENCEEYETKYIPGRAVLSGGWRAFSVAHKLVPKDTVLFQLIKATKLKVYILRE
KVAKKVILNTSSDGSNSHSMKQAKELRKKLALEKMPLSSDAANSHSMKQAKELRKKLALEEMPT
CMKFIRPSHVSGCFWLRLPVDFCKLNLPKEDCIITLVDERGEEYEMKYVAERVGIGGGWRAFSV
AHKLVPKDTVLFQLIKATKFKVYILRENVAKKETLTEEDNVDEGASHHLSDLQKKNQNAIPPGS
TYNPGPPAGEQFENES

### Similar gene clusters

### NC_056563 - Cluster 42 - Saccharide-cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_056563 - Gene Cluster 42. Type = saccharide-cyclopeptide. Location: 21691304 - 22598935 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122084405
Repeat occurs 9 times in a sequence of 119 amino acids
Location between 21706362 and 21706827
Coverage of 113.45 %
Instances:
HAHAHDHAHAHAHAH | HAHDHAHAHAHAHAH | HAHAHAHAHAHAHSH | HAHAHAHAHAHSHVH | HAHAHAHAHSHVHAH
HAHAHAHSHVHAHGP | HAHAHSHVHAHGPAT | HAHSHVHAHGPATAV | HAHGPATAVSVPVPA |
pattern: HAH[ASGD][HP][ASVD][TH][ASV][HV][ASVG][HVP][SVPGA][THVP][SVPGA][TVPAH]
MAKGAAFFVLVLALAFVFLMDSAYSDDSAYEAGRKVKETAHDLKHKTEDFFKGIFGRLAKNHH
HHDHAHAHDHAHAHAHAHAHAHSHVHAHGPATAVSVPVPAPAETPKAAKAEAPSHV

Repeat found in LOC122084114
Repeat occurs 3 times in a sequence of 325 amino acids
Location between 21851396 and 21856523
Coverage of 10.15 %
Instances:
EEEEEKKLKKK | EEEEKKLKKKK | EEEKKLKKKKA |
pattern: EEE[KE][KE][KL][KL][KL]KK[AK]
MVNLVAAQKPLLHGMMKLAGLSPKTVEIEPGTTMNFWVPSETIKKAKADPAHTLEEEEEKKLK
KKKANKKKPVVVMIHGFAAEGIVTWQFQVGALTKNYAIYIPDLLFFGGSITDETDRSPEFQTEC
LVKALTKLRVDTCTVVGFSYGGMVAFKMAELHPNFVKSLVVSGTNPALTDSISEETMSRLGFSS
SSEMLLPTSVKGLKSLLKVAIHKKLWFPNRLYKDYLEVMFTNRKERGELLETLVNNRKNITIPN
LTQRIYLLWGEEDQIFNMEIAQNLKGQLGDNATLLSIKKGGHLVHLERPCVYNRLLKSILASLH
TDTAQQ

### Similar gene clusters

### NC_056563 - Cluster 43 - Terpene

### Gene cluster description

Download cluster GenBank file
NC_056563 - Gene Cluster 43. Type = terpene. Location: 31846763 - 31969629 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056564 - Cluster 44 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_056564 - Gene Cluster 44. Type = cyclopeptide. Location: 1187758 - 2356258 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

No repeats detected in this cluster.

### Similar gene clusters

### NC_056564 - Cluster 45 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_056564 - Gene Cluster 45. Type = saccharide. Location: 8267216 - 8451874 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056564 - Cluster 46 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_056564 - Gene Cluster 46. Type = saccharide. Location: 14683021 - 14903315 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056564 - Cluster 47 - Fatty_acid

### Gene cluster description

Download cluster GenBank file
NC_056564 - Gene Cluster 47. Type = fatty_acid. Location: 16129822 - 16274753 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056565 - Cluster 48 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_056565 - Gene Cluster 48. Type = cyclopeptide. Location: 1468847 - 2957246 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122088571
Repeat occurs 31 times in a sequence of 1811 amino acids
Location between 2703546 and 2712694
Coverage of 22.25 %
Instances:
YSPTSPGYSPTSP | YSPTSPGYSPTSP | YSPTSPGYSPTSP | YSPTSPTYCPSSP | YSPTSPAYSPTSP
YSPTSPSYSPTSP | YSPTSPSYSPTSP | YSPTSPSYSPTSP | YSPTSPSYSPTSP | YSPTSPSYSPPSP
YSPPSPSYSPTSP | YSPTSPAYSPTSP | YSPTSPAYSPTSP | YSPTSPSYSPTSP | YSPTSPSYSPTSP
YSPTSPSYSPTSP | YSPTSPSYSPTSP | YSPTSPAYSPTSP | YSPTSPGYSPTSP | YSPTSPSYSPTSR
YSPTSRSYSPTSP | YSPTSPSYNPPSA | YSPSLAYSPSSPR | YSPSSPRLSPSSP | YSPTSPSYSPPSP
YSPPSPSYSPSSP | YSPSSPDNSGVSP | YSPSSPQYSPSAG | YSPSAGYSPTAPG | YSPTAPGYSPSST
YSPSSTSQYTPQF |
pattern: YSP[TSP][ASL][TRPGA][TSQRYGDA][NSQYL][NSYPC][TSGP][TSVPA][ASQP][TRPGAF]
MDMRYQFSPAEVKKVRRVQFGIISPDEIRQMSVVQVEHGETTEKGKPKPGGLSDPRLGTIDRK
LKCETCNATMSECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILVDEDDHKFKQALRI
KNPKHRMKKILDACKNKAKCDGGEDINVEGQNSEQPVKKSQGGCGAQQPKLTVEGMKMVAEYKT
QRKKNDEQDQLPEPVERKQQLSAERVLGVLKRIRDEDSVKLGLDPEYARPDWMILQVLPIPPPP
VRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQEKNGAPAHIISEFAQLLQFHIATYFDNELP
GQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALN
LTYPETVTPYNIERLKELVEFGPHPPPGKTGAKYIIREDGQRLDLRYLKKSSDHHLELGYKVER
HLQDGDYVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTTPYNADFDGDEMNMHVPQSFETR
AEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDIFIEKDVFMNILMWWEDFDGKIPA
PAILKPKPLWTGKQVFNLIIPKQINLLRNSAWHSESETGFITPADTQVRIEKGELLSGILCKKT
LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISK
AKSEVKELIKASQESQLEAEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTA
GSKGSFINISQMTACVGQQNVEGKRIPFGFIGRTLPHFTKDDNGPESRGFVENSYLRGLTPQEF
FFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVW
IESQKLDSLKMKKSEFNAVFRYEIDDENWNPNYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY
QLGTEIATTGENSWPMPVNLKRLIWNAQKTFKLDLRRPSDMHPMEIVEAVDKLQERLKVVPGDD
FLSTEAQKNATLLFNILLRSTFASKRVLKEYGLTREAFDWVIGEIESRFLQSLVAPGEMIGCVA
AQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVNKTKEKAK
NVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEISPEKISPWLLRIELN
REMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEASKGESQDESAEDDVF
LKRIESNMLTEMALRGIPDINKVFIKSGKVNQFDENEGFKPEVEWMLDTEGVNLLAVMCHEDVD
ATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRH
GINRNDTGPMMRCSFEETVDILLDAAVYAETDFLRGVTENIMLGQLAPIGTGGCALYLNDHMLQ
QAIELQLPSYMEGLGMTPSRSPITGTPYNEGMVSPSYLLSPTIRSSPITDAQFSPYVGGMAFSP
TSSPCYSLSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYCPSSPGYSPTSPAYSPTSPSYSP
TSPSYSPTSPSYSPTSPSYSPTSPSYSPPSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPT
SPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSRSYSPTSPSYNPPSAKYSPSLAYSPSSP
RLSPSSPYSRSSPNYSPTSPSYSPPSPSYSPSSPDNSGVSPDYSPSSPQYSPSAGYSPTAPGYS
PSSTSQYTPQFSNKDEGSTP

### Similar gene clusters

### NC_056565 - Cluster 49 - Saccharide-transporter_associated-alkaloid

### Gene cluster description

Download cluster GenBank file
NC_056565 - Gene Cluster 49. Type = saccharide-transporter_associated-alkaloid. Location: 15705178 - 15982781 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))
plants/transporter_associated: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[MatE/LTP_2/ABC2_membrane/ABC_tran]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056565 - Cluster 50 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_056565 - Gene Cluster 50. Type = cyclopeptide. Location: 17401488 - 18007318 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122089584
Repeat occurs 6 times in a sequence of 168 amino acids
Location between 17823083 and 17823590
Coverage of 39.29 %
Instances:
PSGPSCPPARE | PSGPSDPPARE | PSGISDPPANE | PSGPSDPPARE | PSGPSHPPARE
PSGPSDPPAHD |
pattern: PSG[IP]S[DHC]PPA[NRH][DE]
MAMLTMKVLVLILILSPAINGVVEARAGSDWFTYLPKGAPIPPSGPSCPPARERFHFLPKGAP
IPPSGPSDPPAREGFHYLSKGSPILPSGISDPPANEGFHYLPKGAPIPPSGPSDPPAREGFHYL
PKGSPIPPSGPSHPPAREGFHYLPKGAPIPPSGPSDPPAHD

Repeat found in LOC122087989
Repeat occurs 19 times in a sequence of 467 amino acids
Location between 17824445 and 17831698
Coverage of 61.03 %
Instances:
YLPKGAPIPPSGPSR | YLPKGAPIPPSGPSD | YLPKGSPIPPSGPSR | YLPKGSPIPPSGPSR | YLPKGAPIPPAGPFD
YLPKGSPIPPSGPSR | YLPKGSPIPPSGPSR | YLPKGAPIPPSGPSD | YLPKGSPIPPSGPSR | YLPKGSPIPPSGPSR
YLPKGSPIPPSGPSR | YLPKGAPIPPSGPSD | YLPKGSPIPPSGPSR | YLPKGAPIPPSGPSD | YLPKGSPIPPSGPSR
YLPKGSPIPPSGPSR | YLPKGAPIPPSGPSD | YLPKGSPIPPSGPSR | YLPKGAPIPPYGPSD |
pattern: YLPKG[AS]PIPP[ASY]GP[FS][RD]
MATLTMKFLMLVFLLSPAINGVVEARAGSDWFTYLPKGAPIPPSGPSRPPAREGFHYLPKGAP
IPPSGPSDPPAYEGFHYLPKGSPIPPSGPSRPPAHEGFHYLPKGSPIPPSGPSRPPAREGFHYL
PKGAPIPPAGPFDPPAHEGFHYLPKGSPIPPSGPSRPPAREGFHYLPKGSPIPPSGPSRPPARE
GFHYLPKGAPIPPSGPSDLPAHEGFHYLPKGSPIPPSGPSRPPAREGFHYLPKGSPIPPSGPSR
PPAHEGFHYLPKGSPIPPSGPSRPPAREGFHYLPKGAPIPPSGPSDPPAHEGFHYLPKGSPIPP
SGPSRPSAREGFHYLPKGAPIPPSGPSDPPAHEGFHYLPKGSPIPPSGPSRPPAREGFHYLPKG
SPIPPSGPSRPPAREGFHYLPKGAPIPPSGPSDPPAHEGFHYLPKGSPIPPSGPSRPPAREGFH
YLPKGAPIPPYGPSDPPAHE

### Similar gene clusters

### NC_056565 - Cluster 51 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_056565 - Gene Cluster 51. Type = cyclopeptide. Location: 17588001 - 18081731 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122089584
Repeat occurs 6 times in a sequence of 168 amino acids
Location between 17823083 and 17823590
Coverage of 39.29 %
Instances:
PSGPSCPPARE | PSGPSDPPARE | PSGISDPPANE | PSGPSDPPARE | PSGPSHPPARE
PSGPSDPPAHD |
pattern: PSG[IP]S[DHC]PPA[NRH][DE]
MAMLTMKVLVLILILSPAINGVVEARAGSDWFTYLPKGAPIPPSGPSCPPARERFHFLPKGAP
IPPSGPSDPPAREGFHYLSKGSPILPSGISDPPANEGFHYLPKGAPIPPSGPSDPPAREGFHYL
PKGSPIPPSGPSHPPAREGFHYLPKGAPIPPSGPSDPPAHD

Repeat found in LOC122087989
Repeat occurs 19 times in a sequence of 467 amino acids
Location between 17824445 and 17831698
Coverage of 61.03 %
Instances:
YLPKGAPIPPSGPSR | YLPKGAPIPPSGPSD | YLPKGSPIPPSGPSR | YLPKGSPIPPSGPSR | YLPKGAPIPPAGPFD
YLPKGSPIPPSGPSR | YLPKGSPIPPSGPSR | YLPKGAPIPPSGPSD | YLPKGSPIPPSGPSR | YLPKGSPIPPSGPSR
YLPKGSPIPPSGPSR | YLPKGAPIPPSGPSD | YLPKGSPIPPSGPSR | YLPKGAPIPPSGPSD | YLPKGSPIPPSGPSR
YLPKGSPIPPSGPSR | YLPKGAPIPPSGPSD | YLPKGSPIPPSGPSR | YLPKGAPIPPYGPSD |
pattern: YLPKG[AS]PIPP[ASY]GP[FS][RD]
MATLTMKFLMLVFLLSPAINGVVEARAGSDWFTYLPKGAPIPPSGPSRPPAREGFHYLPKGAP
IPPSGPSDPPAYEGFHYLPKGSPIPPSGPSRPPAHEGFHYLPKGSPIPPSGPSRPPAREGFHYL
PKGAPIPPAGPFDPPAHEGFHYLPKGSPIPPSGPSRPPAREGFHYLPKGSPIPPSGPSRPPARE
GFHYLPKGAPIPPSGPSDLPAHEGFHYLPKGSPIPPSGPSRPPAREGFHYLPKGSPIPPSGPSR
PPAHEGFHYLPKGSPIPPSGPSRPPAREGFHYLPKGAPIPPSGPSDPPAHEGFHYLPKGSPIPP
SGPSRPSAREGFHYLPKGAPIPPSGPSDPPAHEGFHYLPKGSPIPPSGPSRPPAREGFHYLPKG
SPIPPSGPSRPPAREGFHYLPKGAPIPPSGPSDPPAHEGFHYLPKGSPIPPSGPSRPPAREGFH
YLPKGAPIPPYGPSDPPAHE

### Similar gene clusters

### NC_056565 - Cluster 52 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_056565 - Gene Cluster 52. Type = cyclopeptide. Location: 22509341 - 23184634 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NC_056565 - Cluster 53 - Alkaloid

### Gene cluster description

Download cluster GenBank file
NC_056565 - Gene Cluster 53. Type = alkaloid. Location: 29122238 - 29392236 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056565 - Cluster 54 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_056565 - Gene Cluster 54. Type = saccharide. Location: 30775213 - 31002316 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056565 - Cluster 55 - Polyketide

### Gene cluster description

Download cluster GenBank file
NC_056565 - Gene Cluster 55. Type = polyketide. Location: 33890635 - 33984234 nt. Click on genes for more information.
Show pHMM detection rules used
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056565 - Cluster 56 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_056565 - Gene Cluster 56. Type = saccharide. Location: 35755521 - 36069554 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056566 - Cluster 57 - Putative

### Gene cluster description

Download cluster GenBank file
NC_056566 - Gene Cluster 57. Type = putative. Location: 1726573 - 2147314 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056566 - Cluster 58 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_056566 - Gene Cluster 58. Type = cyclopeptide. Location: 2482016 - 2769107 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NC_056566 - Cluster 59 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_056566 - Gene Cluster 59. Type = cyclopeptide. Location: 3130080 - 5230415 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122091569
Repeat occurs 3 times in a sequence of 365 amino acids
Location between 3296674 and 3305197
Coverage of 5.75 %
Instances:
ERGEDGE | ERGDGWM | ERGEDGE |
pattern: ERG[DE][GD][GW][ME]
MGELFNERGEDGELEMSLQEVPSGHWKSSLIIQVQPTNIQGKPFFYFPLRKKKNLLSEDTRER
SRQTAISKKKKEGEMEQGSAFDLYLLPEDCISNILSLTTPRDVCRSSTVSPVFRSAANSDSVWE
KFLPSDIHQILSSSSVSPSLPTFSSKKQLFLHLCDNPLLIDGGTKTFALEKCSGKKCYMIGARE
LTIIWGSSPEYWKWIPHPESRFSEVAELLCVWWLEIRGKIETRLLSPNTTYGAYLVLKFTNRAY
GFEPLAEVSVKLASGTGGAEEGEVKSVSLNPRSLRSRNASSSEEAVADPPPEGPKERGDGWMEI
EMGEFFNERGEDGEVVMSLMEVNCSICKSGLIIQGIELRPKENQPV

Repeat found in LOC122091773
Repeat occurs 4 times in a sequence of 494 amino acids
Location between 5110451 and 5112373
Coverage of 7.29 %
Instances:
GGGAPGGGG | GGGGGSGGP | GGGGSGGPA | GGGSGGPAP |
pattern: GGG[ASG][SGP][SG][GP][AGP][AGP]
MEGGQTGGGAPGGGGGSGGPAPFLLKTYDMIDDSSTDKIVSWSDNKNSFVVWNPPEFAARLLP
TYFKHNNFSSFIRQLNTYGFRKIDPEKWEFANEDFVKDQKHLLKNIYRRKPIHSHSHPQGSGGD
AERAALEEEIEKLSREKTTLQGTLWRFRQQQSGTKVQLEDLDRRVEGMEQRQMRMMTFLAKAME
NPIFVEHLVRMAGSSMDLSAINKRRRLPNLDCCQEVLDNSLADNHNSPKPDIGHIFHQDFSSKL
NLELSPAVSDSNLVYPSAQSSNEDGGSPQRRASEGDVRDAHVMMEGLSFTPETFDLSDTGTSFA
LKKDATLSRQVRENDTSRLHSLPHGLTSTEEGDGHISCHLNLTLASFALQVENSHYSSRISQLG
PESGTSTELRSSANGNEADLRVASKNRSTSNDDAPKPSSNDAPTNNKGPSAPQGRVNDVFWEQF
LTERPGSSDTEEASSSLRANPYDDQEEKMSGHGKSWRNRKDMEQLTL

### Similar gene clusters

### NC_056566 - Cluster 60 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_056566 - Gene Cluster 60. Type = cyclopeptide. Location: 14041842 - 14637964 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

No repeats detected in this cluster.

### Similar gene clusters

### NC_056566 - Cluster 61 - Terpene-alkaloid

### Gene cluster description

Download cluster GenBank file
NC_056566 - Gene Cluster 61. Type = terpene-alkaloid. Location: 21230081 - 21356153 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056566 - Cluster 62 - Terpene

### Gene cluster description

Download cluster GenBank file
NC_056566 - Gene Cluster 62. Type = terpene. Location: 25120622 - 25270390 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056567 - Cluster 63 - Alkaloid

### Gene cluster description

Download cluster GenBank file
NC_056567 - Gene Cluster 63. Type = alkaloid. Location: 4267587 - 4420228 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056567 - Cluster 64 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_056567 - Gene Cluster 64. Type = cyclopeptide. Location: 4976045 - 5905856 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122093949
Repeat occurs 3 times in a sequence of 504 amino acids
Location between 5194749 and 5198072
Coverage of 4.76 %
Instances:
ASASASAP | ASASAPAP | ASAPAPTY |
pattern: ASA[SP]A[SP][AT][YP]
MHPAISLFPNIEFYGKQILDAPNVKEKIHEKHFLQGNIYGPYSFINVAYGREENDGHGKKNMV
EVAVVSAIVKSLSEASFASRQDLSVGVISPYKAQVFAIKEKLGNTYNTLKYFSVSIRTVDGFQG
GEEDVIIISTVRSNGRGLVGFLANFQRTNVALTRARYCLWVLGNGPTLINSGSIWRKLVLDAKD
RGCFFNADHEKSLKEAIIAGLVELREFDKLLNTDSLLFAGARWKVLFSNDFWKSIVKIRRVETR
NEVLSLLMKLASGWRNPQKWKNLHLMDGTSSELLNVYKVDEWFNLVWTVDILRENSKYIQVLKV
WDILPLQEIPNLAKRLDVIFGNYKVDEMKRSKFKCSEGNLEVPMSWDTSSAATLMDLPNPKPLQ
YLSSHFTSLHLGKEPNASASASAPAPTYIAKDGKTNDLAETTKMKWRSLPGLLKRGIWKFALPT
WEEDPVLPTVIVPHGQVMWLFLLLDREYMVHMSHMPTLQISKCESIKYPHVYWHARL

Repeat found in LOC122092727
Repeat occurs 7 times in a sequence of 747 amino acids
Location between 5326888 and 5329132
Coverage of 6.56 %
Instances:
VSWNTMI | VSWNSML | VSWNLML | VSWVTML | VSWTTMI
VSWNTMI | VSWNSMI |
pattern: VSW[NVT][TSL]M[IL]
MRSAVKSIGESGSLVFNQNLKIAQLGKCGQIEEAIKIFERMVNRNTVTWNSMISAYAKNGRIT
DARRLFDQMHSKNLVSWNTMIAGYLHNDQIHEAADLFGKMPKRDIFSWTLMITCYTRNGELQKA
RYFFDRLPDKRNLVCWNAMITGYVKNQRLEEARRLFDQMPVRDMVSWNSMLTGYTQNGEIGMGL
KFFDQMEERDAVSWNLMLDGFIQACDLDSAWLFFLRIPSPNIVSWVTMLSGYARNGQIAEAQRI
FEQMPEKNVVAWNAMLAGYVQNGEIDEAIRLFKQMPESNSVSWTTMINGYVRVGKLSEARELLN
SMPYKNVAAKTAMISGYVQSMRMDEARDIFDSVGSRDVVCWNTMIAGYAMCRRMDEAIKLFKQM
HKKDIVSWNTMIAGYAQEGQMDKALHIFDEMVERNTVSWNSMISGFTQNGLCTDALQHFVLMVR
EGKKPDQSTFATSLSACANLAALQVGKQLHHLVMKLGYVHDLFVGNALITMYAKCGRVLSADQV
FNDISSADIISWNSLIAGYALNGYGKEAIQLFQEMEMVGVAPDQVTFVGLLSACSHAGLIDQGL
KLFKSMTDDFSIEPVAEHYACMVDLLGRAGRLEEAYQLVMKMPIRANAGTWGALLGACRMYRNL
ELGKFAAEKLSEFEPHKTSNYVLLSNIHAEAGRWEEVERVRVLMKEQGVEKQPGCSWIEVKNQV
HTFISDDPALPRAADICEMLRNLTEQMKSRGYMLDINFSLLDCG

Repeat found in LOC122092727
Repeat occurs 7 times in a sequence of 747 amino acids
Location between 5326888 and 5329132
Coverage of 6.56 %
Instances:
VSWNTMI | VSWNSML | VSWNLML | VSWVTML | VSWTTMI
VSWNTMI | VSWNSMI |
pattern: VSW[NVT][TSL]M[IL]
MRSAVKSIGESGSLVFNQNLKIAQLGKCGQIEEAIKIFERMVNRNTVTWNSMISAYAKNGRIT
DARRLFDQMHSKNLVSWNTMIAGYLHNDQIHEAADLFGKMPKRDIFSWTLMITCYTRNGELQKA
RYFFDRLPDKRNLVCWNAMITGYVKNQRLEEARRLFDQMPVRDMVSWNSMLTGYTQNGEIGMGL
KFFDQMEERDAVSWNLMLDGFIQACDLDSAWLFFLRIPSPNIVSWVTMLSGYARNGQIAEAQRI
FEQMPEKNVVAWNAMLAGYVQNGEIDEAIRLFKQMPESNSVSWTTMINGYVRVGKLSEARELLN
SMPYKNVAAKTAMISGYVQSMRMDEARDIFDSVGSRDVVCWNTMIAGYAMCRRMDEAIKLFKQM
HKKDIVSWNTMIAGYAQEGQMDKALHIFDEMVERNTVSWNSMISGFTQNGLCTDALQHFVLMVR
EGKKPDQSTFATSLSACANLAALQVGKQLHHLVMKLGYVHDLFVGNALITMYAKCGRVLSADQV
FNDISSADIISWNSLIAGYALNGYGKEAIQLFQEMEMVGVAPDQVTFVGLLSACSHAGLIDQGL
KLFKSMTDDFSIEPVAEHYACMVDLLGRAGRLEEAYQLVMKMPIRANAGTWGALLGACRMYRNL
ELGKFAAEKLSEFEPHKTSNYVLLSNIHAEAGRWEEVERVRVLMKEQGVEKQPGCSWIEVKNQV
HTFISDDPALPRAADICEMLRNLTEQMKSRGYMLDINFSLLDCG

Repeat found in LOC122092727
Repeat occurs 7 times in a sequence of 747 amino acids
Location between 5326888 and 5329132
Coverage of 6.56 %
Instances:
VSWNTMI | VSWNSML | VSWNLML | VSWVTML | VSWTTMI
VSWNTMI | VSWNSMI |
pattern: VSW[NVT][TSL]M[IL]
MRSAVKSIGESGSLVFNQNLKIAQLGKCGQIEEAIKIFERMVNRNTVTWNSMISAYAKNGRIT
DARRLFDQMHSKNLVSWNTMIAGYLHNDQIHEAADLFGKMPKRDIFSWTLMITCYTRNGELQKA
RYFFDRLPDKRNLVCWNAMITGYVKNQRLEEARRLFDQMPVRDMVSWNSMLTGYTQNGEIGMGL
KFFDQMEERDAVSWNLMLDGFIQACDLDSAWLFFLRIPSPNIVSWVTMLSGYARNGQIAEAQRI
FEQMPEKNVVAWNAMLAGYVQNGEIDEAIRLFKQMPESNSVSWTTMINGYVRVGKLSEARELLN
SMPYKNVAAKTAMISGYVQSMRMDEARDIFDSVGSRDVVCWNTMIAGYAMCRRMDEAIKLFKQM
HKKDIVSWNTMIAGYAQEGQMDKALHIFDEMVERNTVSWNSMISGFTQNGLCTDALQHFVLMVR
EGKKPDQSTFATSLSACANLAALQVGKQLHHLVMKLGYVHDLFVGNALITMYAKCGRVLSADQV
FNDISSADIISWNSLIAGYALNGYGKEAIQLFQEMEMVGVAPDQVTFVGLLSACSHAGLIDQGL
KLFKSMTDDFSIEPVAEHYACMVDLLGRAGRLEEAYQLVMKMPIRANAGTWGALLGACRMYRNL
ELGKFAAEKLSEFEPHKTSNYVLLSNIHAEAGRWEEVERVRVLMKEQGVEKQPGCSWIEVKNQV
HTFISDDPALPRAADICEMLRNLTEQMKSRGYMLDINFSLLDCG

### Similar gene clusters

### Similar known gene clusters

### NC_056567 - Cluster 65 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_056567 - Gene Cluster 65. Type = cyclopeptide. Location: 8215621 - 9848423 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

No repeats detected in this cluster.

### Similar gene clusters

### NC_056567 - Cluster 66 - Putative

### Gene cluster description

Download cluster GenBank file
NC_056567 - Gene Cluster 66. Type = putative. Location: 23908685 - 24145955 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056568 - Cluster 67 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_056568 - Gene Cluster 67. Type = saccharide. Location: 1472341 - 1933240 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056568 - Cluster 68 - Fatty_acid

### Gene cluster description

Download cluster GenBank file
NC_056568 - Gene Cluster 68. Type = fatty_acid. Location: 2772287 - 2865523 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056568 - Cluster 69 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_056568 - Gene Cluster 69. Type = cyclopeptide. Location: 14588908 - 16737027 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NC_056568 - Cluster 70 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_056568 - Gene Cluster 70. Type = cyclopeptide. Location: 20051827 - 20830064 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NC_056568 - Cluster 71 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_056568 - Gene Cluster 71. Type = cyclopeptide. Location: 22947148 - 23400988 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NC_056569 - Cluster 72 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_056569 - Gene Cluster 72. Type = cyclopeptide. Location: 201493 - 1644212 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122059846
Repeat occurs 3 times in a sequence of 525 amino acids
Location between 1064732 and 1066977
Coverage of 8.57 %
Instances:
LLDNTKAELAKKNDE | LLDNTKAELVKKNDE | LLDGTKVELAKKDDE |
pattern: LLD[NG]TK[AV]EL[AV]KK[ND]DE
MFEAKEMSDDEGEFFECQYDSSFLERVVPLGPFGFPNLLLLKPQVVNEFQNLLDNTKAELAKK
NDELNELRSLLDNTKAELVKKNDELNELRSLLDGTKVELAKKDDEMNELKKQKIDEDWNPEQFR
VSIVAITNSMKRVFVDFGLEPPESGDPKSVLKFLEMLHDLIIYKEFNSTFLVAANGILASIASI
FEKRSGLTIGMEIAISNPARLIENLFTLRGFIDSHFFIDGSVIVEDFHLMNKDDLPIIFRDSAV
DVPELKQKDIGSKSIDNIDRNFHFYGYFNIPMVGMFKGVLTRVHVNLPDEIMVKLQVGKHTLND
KRFWFVNANGASIFQKELLSPKDIKFTPSRILGDRTDFVGFFRRMNRIFVNGKGTYLKFDFIAG
KYSGSGAVFDDTVRYYIKEGVIFYPFKMVQFDVNTPATNIVQREVYLPLSTSKDMGQNDATYIV
DVLGIDCAFTFNDFCFVGKITKATGTFRENALVSVFFEQNEHGENCYVDALATTFFILKTGKVT
SHVYRDKLKDPKFV

Repeat found in LOC122059846
Repeat occurs 3 times in a sequence of 519 amino acids
Location between 1065417 and 1066977
Coverage of 8.67 %
Instances:
LLDNTKAELAKKNDE | LLDNTKAELVKKNDE | LLDGTKVELAKKDDE |
pattern: LLD[NG]TK[AV]EL[AV]KK[ND]DE
MSDDEGEFFECQYDSSFLERVVPLGPFGFPNLLLLKPQVVNEFQNLLDNTKAELAKKNDELNE
LRSLLDNTKAELVKKNDELNELRSLLDGTKVELAKKDDEMNELKKQKIDEDWNPEQFRVSIVAI
TNSMKRVFVDFGLEPPESGDPKSVLKFLEMLHDLIIYKEFNSTFLVAANGILASIASIFEKRSG
LTIGMEIAISNPARLIENLFTLRGFIDSHFFIDGSVIVEDFHLMNKDDLPIIFRDSAVDVPELK
QKDIGSKSIDNIDRNFHFYGYFNIPMVGMFKGVLTRVHVNLPDEIMVKLQVGKHTLNDKRFWFV
NANGASIFQKELLSPKDIKFTPSRILGDRTDFVGFFRRMNRIFVNGKGTYLKFDFIAGKYSGSG
AVFDDTVRYYIKEGVIFYPFKMVQFDVNTPATNIVQREVYLPLSTSKDMGQNDATYIVDVLGID
CAFTFNDFCFVGKITKATGTFRENALVSVFFEQNEHGENCYVDALATTFFILKTGKVTSHVYRD
KLKDPKFV

Repeat found in LOC122059846
Repeat occurs 3 times in a sequence of 519 amino acids
Location between 1065417 and 1066977
Coverage of 8.67 %
Instances:
LLDNTKAELAKKNDE | LLDNTKAELVKKNDE | LLDGTKVELAKKDDE |
pattern: LLD[NG]TK[AV]EL[AV]KK[ND]DE
MSDDEGEFFECQYDSSFLERVVPLGPFGFPNLLLLKPQVVNEFQNLLDNTKAELAKKNDELNE
LRSLLDNTKAELVKKNDELNELRSLLDGTKVELAKKDDEMNELKKQKIDEDWNPEQFRVSIVAI
TNSMKRVFVDFGLEPPESGDPKSVLKFLEMLHDLIIYKEFNSTFLVAANGILASIASIFEKRSG
LTIGMEIAISNPARLIENLFTLRGFIDSHFFIDGSVIVEDFHLMNKDDLPIIFRDSAVDVPELK
QKDIGSKSIDNIDRNFHFYGYFNIPMVGMFKGVLTRVHVNLPDEIMVKLQVGKHTLNDKRFWFV
NANGASIFQKELLSPKDIKFTPSRILGDRTDFVGFFRRMNRIFVNGKGTYLKFDFIAGKYSGSG
AVFDDTVRYYIKEGVIFYPFKMVQFDVNTPATNIVQREVYLPLSTSKDMGQNDATYIVDVLGID
CAFTFNDFCFVGKITKATGTFRENALVSVFFEQNEHGENCYVDALATTFFILKTGKVTSHVYRD
KLKDPKFV

Repeat found in LOC122060157
Repeat occurs 4 times in a sequence of 591 amino acids
Location between 1112362 and 1114138
Coverage of 4.06 %
Instances:
ELAKKN | ELAKKN | ELAKKN | ELAKQK |
pattern: ELAK[KQ][NK]
MSWSSSDNFYVNARLEVFSVDLLSEPLELTRSTGVVYDGPKGDDFLRFLRSKNFRVNRQGKAI
VYVQKRNGDGEFLECLYDTFILETVVPLGPFGFQNVPLPKPQEVIELQSLLDSTKSELAKKNDV
IKELESNLGNNKAELAKKNYALNELQSLLDNTKAELAKKNDALNELAKQKIDQDWTQEQFRLTM
VAITNSMKRVFIGFGLEPPASGGPESVLRFLEMLCDLILHKECGATFLVAANEILASMANIFEK
RTGLSIGMETTNSTPMTPACLIKSLSTLRVFMVDAHFFIDGNVIVRDLHLMNEEDLPVIFRDSK
ADVAELKQNKEMGTKSIDNINKKSIFYGYFNIPTIGIFKGVLTRVHVNLPDEIMVKLRAGGKHT
LNDNRFWFVYANGAGIFESTDNLEIVKFAPSRVLGDRTNFLEFFLRMNRTFVNEKGTYLKFDFI
ASNPSILRDWPDNTVRYYDKDFIMHNPFKLVQFDVNECPTDTLQQEVSFPGASKATSGKYATWI
VNEALGNNCAFQFKNFCFIGKITKEASGIFRKNALVSVFFEQNQHGENCYVDALATTFFVLKTE
QLNSWINDRKKSVEFI

### Similar gene clusters

### NC_056569 - Cluster 73 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_056569 - Gene Cluster 73. Type = cyclopeptide. Location: 1419414 - 2052731 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NC_056569 - Cluster 74 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_056569 - Gene Cluster 74. Type = saccharide. Location: 2212726 - 2260975 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056569 - Cluster 75 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_056569 - Gene Cluster 75. Type = cyclopeptide. Location: 5946190 - 6557160 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122059714
Repeat occurs 3 times in a sequence of 614 amino acids
Location between 6413264 and 6415109
Coverage of 3.42 %
Instances:
YSKCDSL | YSKMGQL | YSKCGNI |
pattern: YSK[MC][GD][NSQ][IL]
MLYVLNSMRSKTSVCLTQIHRRYVSSLIESHLKKPLSQNPFLKSDGNILITRLCRDKKLKEAI
DILCQHKKLKQGSPILEVLDHSLTCPSASVYSSLLQLCLQQRALEEGRRVHNHIKSSGFVPGVF
IYNRLLDMYSKCDSLVDAQILFDEMTGRDLCSWNTMISGYSKMGQLNKARQLFEEMPERDNFSW
SAMISGYARHDKPREALELYRKMQRDKKVKGNKFTVSSALAASAAVPCLRSGKEIHGHILRTWL
DSDDVVWSALSDMYGKCGSVDEARHIFDKMLDQDVVTWTTMIGRYLESGRMKEGFELFSDLLRS
GVRPNEFTFAGILTACSTQAAEDVGKQVHGHMTRIGFDPVSFAASALVHMYSKCGNIDSAQKVF
RTTPQPDLVSWTSMIVGYAHNGQPEEAVQYFELLLKSGTKPDHVAFVGVLFACTHAGLVDKGFE
YFRSIKEKHALTYTTDHYACMVDLLGRSGRFEEAEEIIDKMPMKPDKFLWASLLGGCRIHANLR
LAKRAAEALFEIEPENAATYVTLANICATNGMWDEVEKIRKTMDDRRVVKIPGLSRIKIKGKVH
VFLVGDETHPHTEEIRELLENLSIRMKEEGYIPDTNFVL

Repeat found in LOC122059714
Repeat occurs 3 times in a sequence of 614 amino acids
Location between 6413264 and 6415109
Coverage of 3.42 %
Instances:
YSKCDSL | YSKMGQL | YSKCGNI |
pattern: YSK[MC][GD][NSQ][IL]
MLYVLNSMRSKTSVCLTQIHRRYVSSLIESHLKKPLSQNPFLKSDGNILITRLCRDKKLKEAI
DILCQHKKLKQGSPILEVLDHSLTCPSASVYSSLLQLCLQQRALEEGRRVHNHIKSSGFVPGVF
IYNRLLDMYSKCDSLVDAQILFDEMTGRDLCSWNTMISGYSKMGQLNKARQLFEEMPERDNFSW
SAMISGYARHDKPREALELYRKMQRDKKVKGNKFTVSSALAASAAVPCLRSGKEIHGHILRTWL
DSDDVVWSALSDMYGKCGSVDEARHIFDKMLDQDVVTWTTMIGRYLESGRMKEGFELFSDLLRS
GVRPNEFTFAGILTACSTQAAEDVGKQVHGHMTRIGFDPVSFAASALVHMYSKCGNIDSAQKVF
RTTPQPDLVSWTSMIVGYAHNGQPEEAVQYFELLLKSGTKPDHVAFVGVLFACTHAGLVDKGFE
YFRSIKEKHALTYTTDHYACMVDLLGRSGRFEEAEEIIDKMPMKPDKFLWASLLGGCRIHANLR
LAKRAAEALFEIEPENAATYVTLANICATNGMWDEVEKIRKTMDDRRVVKIPGLSRIKIKGKVH
VFLVGDETHPHTEEIRELLENLSIRMKEEGYIPDTNFVL

Repeat found in LOC122059714
Repeat occurs 3 times in a sequence of 614 amino acids
Location between 6413264 and 6415109
Coverage of 3.42 %
Instances:
YSKCDSL | YSKMGQL | YSKCGNI |
pattern: YSK[MC][GD][NSQ][IL]
MLYVLNSMRSKTSVCLTQIHRRYVSSLIESHLKKPLSQNPFLKSDGNILITRLCRDKKLKEAI
DILCQHKKLKQGSPILEVLDHSLTCPSASVYSSLLQLCLQQRALEEGRRVHNHIKSSGFVPGVF
IYNRLLDMYSKCDSLVDAQILFDEMTGRDLCSWNTMISGYSKMGQLNKARQLFEEMPERDNFSW
SAMISGYARHDKPREALELYRKMQRDKKVKGNKFTVSSALAASAAVPCLRSGKEIHGHILRTWL
DSDDVVWSALSDMYGKCGSVDEARHIFDKMLDQDVVTWTTMIGRYLESGRMKEGFELFSDLLRS
GVRPNEFTFAGILTACSTQAAEDVGKQVHGHMTRIGFDPVSFAASALVHMYSKCGNIDSAQKVF
RTTPQPDLVSWTSMIVGYAHNGQPEEAVQYFELLLKSGTKPDHVAFVGVLFACTHAGLVDKGFE
YFRSIKEKHALTYTTDHYACMVDLLGRSGRFEEAEEIIDKMPMKPDKFLWASLLGGCRIHANLR
LAKRAAEALFEIEPENAATYVTLANICATNGMWDEVEKIRKTMDDRRVVKIPGLSRIKIKGKVH
VFLVGDETHPHTEEIRELLENLSIRMKEEGYIPDTNFVL

Repeat found in LOC122059714
Repeat occurs 3 times in a sequence of 614 amino acids
Location between 6413264 and 6415109
Coverage of 3.42 %
Instances:
YSKCDSL | YSKMGQL | YSKCGNI |
pattern: YSK[MC][GD][NSQ][IL]
MLYVLNSMRSKTSVCLTQIHRRYVSSLIESHLKKPLSQNPFLKSDGNILITRLCRDKKLKEAI
DILCQHKKLKQGSPILEVLDHSLTCPSASVYSSLLQLCLQQRALEEGRRVHNHIKSSGFVPGVF
IYNRLLDMYSKCDSLVDAQILFDEMTGRDLCSWNTMISGYSKMGQLNKARQLFEEMPERDNFSW
SAMISGYARHDKPREALELYRKMQRDKKVKGNKFTVSSALAASAAVPCLRSGKEIHGHILRTWL
DSDDVVWSALSDMYGKCGSVDEARHIFDKMLDQDVVTWTTMIGRYLESGRMKEGFELFSDLLRS
GVRPNEFTFAGILTACSTQAAEDVGKQVHGHMTRIGFDPVSFAASALVHMYSKCGNIDSAQKVF
RTTPQPDLVSWTSMIVGYAHNGQPEEAVQYFELLLKSGTKPDHVAFVGVLFACTHAGLVDKGFE
YFRSIKEKHALTYTTDHYACMVDLLGRSGRFEEAEEIIDKMPMKPDKFLWASLLGGCRIHANLR
LAKRAAEALFEIEPENAATYVTLANICATNGMWDEVEKIRKTMDDRRVVKIPGLSRIKIKGKVH
VFLVGDETHPHTEEIRELLENLSIRMKEEGYIPDTNFVL

Repeat found in LOC122059714
Repeat occurs 3 times in a sequence of 614 amino acids
Location between 6413264 and 6415109
Coverage of 3.42 %
Instances:
YSKCDSL | YSKMGQL | YSKCGNI |
pattern: YSK[MC][GD][NSQ][IL]
MLYVLNSMRSKTSVCLTQIHRRYVSSLIESHLKKPLSQNPFLKSDGNILITRLCRDKKLKEAI
DILCQHKKLKQGSPILEVLDHSLTCPSASVYSSLLQLCLQQRALEEGRRVHNHIKSSGFVPGVF
IYNRLLDMYSKCDSLVDAQILFDEMTGRDLCSWNTMISGYSKMGQLNKARQLFEEMPERDNFSW
SAMISGYARHDKPREALELYRKMQRDKKVKGNKFTVSSALAASAAVPCLRSGKEIHGHILRTWL
DSDDVVWSALSDMYGKCGSVDEARHIFDKMLDQDVVTWTTMIGRYLESGRMKEGFELFSDLLRS
GVRPNEFTFAGILTACSTQAAEDVGKQVHGHMTRIGFDPVSFAASALVHMYSKCGNIDSAQKVF
RTTPQPDLVSWTSMIVGYAHNGQPEEAVQYFELLLKSGTKPDHVAFVGVLFACTHAGLVDKGFE
YFRSIKEKHALTYTTDHYACMVDLLGRSGRFEEAEEIIDKMPMKPDKFLWASLLGGCRIHANLR
LAKRAAEALFEIEPENAATYVTLANICATNGMWDEVEKIRKTMDDRRVVKIPGLSRIKIKGKVH
VFLVGDETHPHTEEIRELLENLSIRMKEEGYIPDTNFVL

Repeat found in LOC122059714
Repeat occurs 3 times in a sequence of 614 amino acids
Location between 6413264 and 6415109
Coverage of 3.42 %
Instances:
YSKCDSL | YSKMGQL | YSKCGNI |
pattern: YSK[MC][GD][NSQ][IL]
MLYVLNSMRSKTSVCLTQIHRRYVSSLIESHLKKPLSQNPFLKSDGNILITRLCRDKKLKEAI
DILCQHKKLKQGSPILEVLDHSLTCPSASVYSSLLQLCLQQRALEEGRRVHNHIKSSGFVPGVF
IYNRLLDMYSKCDSLVDAQILFDEMTGRDLCSWNTMISGYSKMGQLNKARQLFEEMPERDNFSW
SAMISGYARHDKPREALELYRKMQRDKKVKGNKFTVSSALAASAAVPCLRSGKEIHGHILRTWL
DSDDVVWSALSDMYGKCGSVDEARHIFDKMLDQDVVTWTTMIGRYLESGRMKEGFELFSDLLRS
GVRPNEFTFAGILTACSTQAAEDVGKQVHGHMTRIGFDPVSFAASALVHMYSKCGNIDSAQKVF
RTTPQPDLVSWTSMIVGYAHNGQPEEAVQYFELLLKSGTKPDHVAFVGVLFACTHAGLVDKGFE
YFRSIKEKHALTYTTDHYACMVDLLGRSGRFEEAEEIIDKMPMKPDKFLWASLLGGCRIHANLR
LAKRAAEALFEIEPENAATYVTLANICATNGMWDEVEKIRKTMDDRRVVKIPGLSRIKIKGKVH
VFLVGDETHPHTEEIRELLENLSIRMKEEGYIPDTNFVL

Repeat found in LOC122059714
Repeat occurs 3 times in a sequence of 614 amino acids
Location between 6413264 and 6415109
Coverage of 3.42 %
Instances:
YSKCDSL | YSKMGQL | YSKCGNI |
pattern: YSK[MC][GD][NSQ][IL]
MLYVLNSMRSKTSVCLTQIHRRYVSSLIESHLKKPLSQNPFLKSDGNILITRLCRDKKLKEAI
DILCQHKKLKQGSPILEVLDHSLTCPSASVYSSLLQLCLQQRALEEGRRVHNHIKSSGFVPGVF
IYNRLLDMYSKCDSLVDAQILFDEMTGRDLCSWNTMISGYSKMGQLNKARQLFEEMPERDNFSW
SAMISGYARHDKPREALELYRKMQRDKKVKGNKFTVSSALAASAAVPCLRSGKEIHGHILRTWL
DSDDVVWSALSDMYGKCGSVDEARHIFDKMLDQDVVTWTTMIGRYLESGRMKEGFELFSDLLRS
GVRPNEFTFAGILTACSTQAAEDVGKQVHGHMTRIGFDPVSFAASALVHMYSKCGNIDSAQKVF
RTTPQPDLVSWTSMIVGYAHNGQPEEAVQYFELLLKSGTKPDHVAFVGVLFACTHAGLVDKGFE
YFRSIKEKHALTYTTDHYACMVDLLGRSGRFEEAEEIIDKMPMKPDKFLWASLLGGCRIHANLR
LAKRAAEALFEIEPENAATYVTLANICATNGMWDEVEKIRKTMDDRRVVKIPGLSRIKIKGKVH
VFLVGDETHPHTEEIRELLENLSIRMKEEGYIPDTNFVL

Repeat found in LOC122059714
Repeat occurs 3 times in a sequence of 614 amino acids
Location between 6413264 and 6415109
Coverage of 3.42 %
Instances:
YSKCDSL | YSKMGQL | YSKCGNI |
pattern: YSK[MC][GD][NSQ][IL]
MLYVLNSMRSKTSVCLTQIHRRYVSSLIESHLKKPLSQNPFLKSDGNILITRLCRDKKLKEAI
DILCQHKKLKQGSPILEVLDHSLTCPSASVYSSLLQLCLQQRALEEGRRVHNHIKSSGFVPGVF
IYNRLLDMYSKCDSLVDAQILFDEMTGRDLCSWNTMISGYSKMGQLNKARQLFEEMPERDNFSW
SAMISGYARHDKPREALELYRKMQRDKKVKGNKFTVSSALAASAAVPCLRSGKEIHGHILRTWL
DSDDVVWSALSDMYGKCGSVDEARHIFDKMLDQDVVTWTTMIGRYLESGRMKEGFELFSDLLRS
GVRPNEFTFAGILTACSTQAAEDVGKQVHGHMTRIGFDPVSFAASALVHMYSKCGNIDSAQKVF
RTTPQPDLVSWTSMIVGYAHNGQPEEAVQYFELLLKSGTKPDHVAFVGVLFACTHAGLVDKGFE
YFRSIKEKHALTYTTDHYACMVDLLGRSGRFEEAEEIIDKMPMKPDKFLWASLLGGCRIHANLR
LAKRAAEALFEIEPENAATYVTLANICATNGMWDEVEKIRKTMDDRRVVKIPGLSRIKIKGKVH
VFLVGDETHPHTEEIRELLENLSIRMKEEGYIPDTNFVL

Repeat found in LOC122059714
Repeat occurs 3 times in a sequence of 614 amino acids
Location between 6413264 and 6415109
Coverage of 3.42 %
Instances:
YSKCDSL | YSKMGQL | YSKCGNI |
pattern: YSK[MC][GD][NSQ][IL]
MLYVLNSMRSKTSVCLTQIHRRYVSSLIESHLKKPLSQNPFLKSDGNILITRLCRDKKLKEAI
DILCQHKKLKQGSPILEVLDHSLTCPSASVYSSLLQLCLQQRALEEGRRVHNHIKSSGFVPGVF
IYNRLLDMYSKCDSLVDAQILFDEMTGRDLCSWNTMISGYSKMGQLNKARQLFEEMPERDNFSW
SAMISGYARHDKPREALELYRKMQRDKKVKGNKFTVSSALAASAAVPCLRSGKEIHGHILRTWL
DSDDVVWSALSDMYGKCGSVDEARHIFDKMLDQDVVTWTTMIGRYLESGRMKEGFELFSDLLRS
GVRPNEFTFAGILTACSTQAAEDVGKQVHGHMTRIGFDPVSFAASALVHMYSKCGNIDSAQKVF
RTTPQPDLVSWTSMIVGYAHNGQPEEAVQYFELLLKSGTKPDHVAFVGVLFACTHAGLVDKGFE
YFRSIKEKHALTYTTDHYACMVDLLGRSGRFEEAEEIIDKMPMKPDKFLWASLLGGCRIHANLR
LAKRAAEALFEIEPENAATYVTLANICATNGMWDEVEKIRKTMDDRRVVKIPGLSRIKIKGKVH
VFLVGDETHPHTEEIRELLENLSIRMKEEGYIPDTNFVL

Repeat found in LOC122059714
Repeat occurs 3 times in a sequence of 614 amino acids
Location between 6413264 and 6415109
Coverage of 3.42 %
Instances:
YSKCDSL | YSKMGQL | YSKCGNI |
pattern: YSK[MC][GD][NSQ][IL]
MLYVLNSMRSKTSVCLTQIHRRYVSSLIESHLKKPLSQNPFLKSDGNILITRLCRDKKLKEAI
DILCQHKKLKQGSPILEVLDHSLTCPSASVYSSLLQLCLQQRALEEGRRVHNHIKSSGFVPGVF
IYNRLLDMYSKCDSLVDAQILFDEMTGRDLCSWNTMISGYSKMGQLNKARQLFEEMPERDNFSW
SAMISGYARHDKPREALELYRKMQRDKKVKGNKFTVSSALAASAAVPCLRSGKEIHGHILRTWL
DSDDVVWSALSDMYGKCGSVDEARHIFDKMLDQDVVTWTTMIGRYLESGRMKEGFELFSDLLRS
GVRPNEFTFAGILTACSTQAAEDVGKQVHGHMTRIGFDPVSFAASALVHMYSKCGNIDSAQKVF
RTTPQPDLVSWTSMIVGYAHNGQPEEAVQYFELLLKSGTKPDHVAFVGVLFACTHAGLVDKGFE
YFRSIKEKHALTYTTDHYACMVDLLGRSGRFEEAEEIIDKMPMKPDKFLWASLLGGCRIHANLR
LAKRAAEALFEIEPENAATYVTLANICATNGMWDEVEKIRKTMDDRRVVKIPGLSRIKIKGKVH
VFLVGDETHPHTEEIRELLENLSIRMKEEGYIPDTNFVL

Repeat found in LOC122059873
Repeat occurs 12 times in a sequence of 1285 amino acids
Location between 6486100 and 6494033
Coverage of 5.6 %
Instances:
LDLNNS | LDLSYF | LDLWSN | LDLSNN | LDLSNN
LDLRNN | LDLGKN | LDLSSN | LDLSNN | LDLSQN
LDLSGY | LDLSTF |
pattern: LDL[NSRGW][NSQTYKG][FNSY]
MGIYLPFARLLLFLSFFYFFFLLLLLLPQIQAAQDSHICLHDQKSALLQFRHEFIITDNISFS
SWEPQTDCCSWDGVTCNVTTGYVIGLDLNNSIGFSSDMISYKVSAPIYSNSSLFGLHHLQRLNL
AYNDFNLAPIPSGFDRLPSLTHLNLSYSNFSGQIPWEFSRLTRLVSLDLSYFSDYAKLERPNLK
ELIQNLTSLVELYLDGVDLSSPSSSPTQGSSDHWSQVLPQSLPNLRALSLSYCSLSGPIHPSFS
QLVFLEELRLDGNYNLSLEAPNFLPLNFSHLKTLSLSYCGLYGEFPNSVFQLPNLRILDVSGNS
LLNGQLPDFPLNNSFQFISLYQTNFSGALPDSIGNLRFLTTLRLGNCNFSGSIPPSLTNLTQLT
ELDLWSNSFTGSVPMFNKDNVPNLAFLELSDNLLDGTIHSSLFTLPSLYRLFLSNIQLTGRLDQ
LFHNSSLSSSSSLVEMDLSGNKLNGQIPKSISQFSSLQSLYLSSNDFSGTVKLEDMFGNLENLS
SLHLSNNNLLSLEFGNTSSSFRPQFYELGLGSCHIKEFPNFLRTQEQLEYLDLSNNQIQGQVPN
WLWKGALGDVDLSYNGIVDLEPAFADHSNNDTSNNTTTPSTLYFYSLKLSSCNLRVFPEFLKNL
NVENLDLSNNTISGQVPNWIWKEGLSYLNLSYNSLNTLELPLLLNLSSSPLSTLDLRNNKLQGS
LPIPASSITFFSISNNSFVGGIPESICKLSGLQVFDASHNNLSGSIPECLGNIDTLSVLDVQGN
RFHGMPPNFTNASSLRTLKMNGNILEGQVPRSLANCTSLEVLDLGKNKMFDTFPFLLGKLPMLR
VLVLHSNRFYGPIKHPRTLDEFPMLQILDLSSNTFTGNFPIEYFGSLKAMMFKKGNKSEPQYIG
ESYYRDSVTIMNKGLEMELVRILTIYTALDLSNNRFQGEIPKVIGELTSLVVLNMSQNDLVGQI
PSSIGNMAELESLDLSQNKLSGQIPRQLANLTFLAFLNLSQNHLEGPIPRGNQLETFSNTSYNA
NPGLCGFPLSRKCRATSDDMPPQGPQGERSTNDSKFDWKFMLMGYGCGMQDSFINSTNSWEPEK
DCCSCGGVTCNFTTGYVIDLDLSGYVIGFHYSSYYVIDSKVSGPIYSDSSLFSLHHLQRLNLAF
NDFKLTPFPSGFDQLPILTHLNLSHSNFPGQIPWEFSRLTRLVSLDLSTFNFDENYYFNICSRI
LKLEKPNLKALIQNLTSLVELYLNGVDLSSPSPKHGRSSHWSQVLPQSLPNLRALSLSGCRLSG
PNHTSF

### Similar gene clusters

### NC_056569 - Cluster 76 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_056569 - Gene Cluster 76. Type = cyclopeptide. Location: 20866690 - 21483577 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NC_056569 - Cluster 77 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_056569 - Gene Cluster 77. Type = cyclopeptide. Location: 24314376 - 25027571 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122060031
Repeat occurs 8 times in a sequence of 1451 amino acids
Location between 24425641 and 24440261
Coverage of 4.96 %
Instances:
IQSYLRGSI | IQSHWRGWS | IQSHIRGWV | IQSHIRQWI | IQSHWRSWL
IQSPELKAL | IQSHVRKWI | IQSFWKGYL |
pattern: IQS[FHYP][EVLIW][KRL][KSQG][ASWY][ISVL]
MEGEQPSPSPSPHPSTLLRDISNFRTPKHSSQNPTLNSPFPPFFTASKQTPSSSSSAFRRRTS
IAPSSKSKAARKLKAFELEQYQSSRKAQIRKEKSLKYLAKSLTAWLNFLFENPKYCGCDLSALT
GAARLENVGTVFANGKKESWPGVDVGIDGAWRTPKRQKDKSWKPAQFADTKPLLSLSAFSSLEV
SMREVCSFEDLTKRMRAYMSLGSCKEVLSAMIQVAKNIDEGRFKMKAHCPIVTDVGMKKKATRV
LMTYNPIWLRIGLYIIFGGDSLLPTVDVNSDQEVLFLKMVVEKQFFSHVGLAKAYAYNKLVEGL
YRPGYFEALGNIILKRFLFLVLILDRAKSQSSLPINYGIDGTDGGSPLLFISQSDIKSSRQVIH
DFLSSEVMHGEGNVLAHLVIIGYKVHYQQCSLFEYDFSVKELFEDLQDGIRLCRAIQLLQHDAS
ILTKMAVPSDTRKRDLANCQLAMQYIKHAAVPLYDEDGVMILAEDVANGDKELTLSLLWNIFVH
LQLPLLINQTLLLEEISKVKGANVDHSKGKPSNLMEMLLEWVQVICHKYDVKVESFASLVDGKA
MWCLMDHYFHKELHCSHFRKGVQDANYEDSILLSADNTDAIHNFILAQKITSILGNFPEVVQMS
DILEHNGPCNEHSVIVLLVFFSSQLIGRKSMDMLNLHKLLGCNCQSPHKKNLSLEKCFLNSEKL
VKENGSDEHRDAVKTVRAIHAWWEEMAKRNNSRVHKSSASNVQSHVASNQLSDIQRERAAKIIQ
SYLRGSIERHKFLKIKSAASLLQTVILAWLMVRQMGTKKASSSITERQSYGWQEHSHTFQKYFK
FLVDRHSFIRLRNSALIIQQAARAWIKQIHQSESILDVESKLTDGKLIFKDLQIDAEDNIQVAW
RELTMHTSFSNKCIAAIKIQSHWRGWSMRKNFLHQRRAAIKIQTMIRYLKCQMVLQQCTLRSAI
IIQSHIRGWVARREANRVRHQIVVIQGHSRSWLVRKDFLNQKNAIIKIQNGLRCVKCWKAFQSY
RHAAIEIQRFIRGQVDRRRLVVLKLQRWWKSILWMKSRTRAVTVIQSHIRQWIAKQAARRERHR
VVVIQSHWRSWLVRKDFLNQKNAIIKIQNCLRCVKCWKNFQSYRHAAIEIQRIVRGRVNRRRLV
GASCLQSVMRYCCMDETSRDFIQSPELKALLYSVLKLQRWWKSVLWMKTRTRAAIIIQSHVRKW
IAKQVSIRERNRVVVIQSFWKGYLARKESKDRLQDLRIRVQKSAANVDDSMRLINRLVAALSEL
LNIRSVTSILHICSTLDVATTHSQNCCEKLVSAGAIDTLLKLISSVSRSIPDQEVLKYALSALR
NLARYSHLAEVLINTHGSVETFLWELLRNKEEGFFIASELLKKLCSTQKGYDAVHRRPLLLKRL
YSLAEDLKRKARNDKRNGRPLALRDSTERRLREVEELLKLITTG

Repeat found in LOC122060031
Repeat occurs 7 times in a sequence of 1344 amino acids
Location between 24425641 and 24440261
Coverage of 4.69 %
Instances:
IQSYLRGSI | IQSHWRGWS | IQSHIRGWV | IQSHWRSWL | IQSPELKAL
IQSHVRKWI | IQSFWKGYL |
pattern: IQS[FHYP][EVLIW][KRL][KSG][ASWY][ISVL]
MEGEQPSPSPSPHPSTLLRDISNFRTPKHSSQNPTLNSPFPPFFTASKQTPSSSSSAFRRRTS
IAPSSKSKAARKLKAFELEQYQSSRKAQIRKEKSLKYLAKSLTAWLNFLFENPKYCGCDLSALT
GAARLENVGTVFANGKKESWPGVDVGIDGAWRTPKRQKDKSWKPAQFADTKPLLSLSAFSSLEV
SMREVCSFEDLTKRMRAYMSLGSCKEVLSAMIQVAKNIDEGRFKMKAHCPIVTDVGMKKKATRV
LMTYNPIWLRIGLYIIFGGDSLLPTVDVNSDQEVLFLKMVVEKQFFSHVGLAKAYAYNKLVEGL
YRPGYFEALGNIILKRFLFLVLILDRAKSQSSLPINYGIDGTDGGSPLLFISQSDIKSSRQVIH
DFLSSEVMHGEGNVLAHLVIIGYKVHYQQCSLFEYDFSVKELFEDLQDGIRLCRAIQLLQHDAS
ILTKMAVPSDTRKRDLANCQLAMQYIKHAAVPLYDEDGVMILAEDVANGDKELTLSLLWNIFVH
LQLPLLINQTLLLEEISKVKGANVDHSKGKPSNLMEMLLEWVQVICHKYDVKVESFASLVDGKA
MWCLMDHYFHKELHCSHFRKGVQDANYEDSILLSADNTDAIHNFILAQKITSILGNFPEVVQMS
DILEHNGPCNEHSVIVLLVFFSSQLIGRKSMDMLNLHKLLGCNCQSPHKKNLSLEKCFLNSEKL
VKENGSDEHRDAVKTVRAIHAWWEEMAKRNNSRVHKSSASNVQSHVASNQLSDIQRERAAKIIQ
SYLRGSIERHKFLKIKSAASLLQTVILAWLMVRQMGTKKASSSITERQSYGWQEHSHTFQKYFK
FLVDRHSFIRLRNSALIIQQAARAWIKQIHQSESILDVESKLTDGKLIFKDLQIDAEDNIQVAW
RELTMHTSFSNKCIAAIKIQSHWRGWSMRKNFLHQRRAAIKIQTMIRYLKCQMVLQQCTLRSAI
IIQSHIRGWVARREANRVRHQIVVIQSHWRSWLVRKDFLNQKNAIIKIQNCLRCVKCWKNFQSY
RHAAIEIQRIVRGRVNRRRLVGASCLQSVMRYCCMDETSRDFIQSPELKALLYSVLKLQRWWKS
VLWMKTRTRAAIIIQSHVRKWIAKQVSIRERNRVVVIQSFWKGYLARKESKDRLQDLRIRVQKS
AANVDDSMRLINRLVAALSELLNIRSVTSILHICSTLDVATTHSQNCCEKLVSAGAIDTLLKLI
SSVSRSIPDQEVLKYALSALRNLARYSHLAEVLINTHGSVETFLWELLRNKEEGFFIASELLKK
LCSTQKGYDAVHRRPLLLKRLYSLAEDLKRKARNDKRNGRPLALRDSTERRLREVEELLKLITT
G

Repeat found in LOC122059325
Repeat occurs 13 times in a sequence of 281 amino acids
Location between 24951097 and 24952161
Coverage of 55.52 %
Instances:
DDDEFAGELDDD | DDDDDDDDSEDE | DDDDDDDSEDED | DDDDDDSEDEDD | DDDDDSEDEDDD
DDDDSEDEDDDD | DDDSEDEDDDDD | DDDDDYSDDDDD | DDDDYSDDDDDE | DDDYSDDDDDES
DDDDDESGENQV | DDDDESGENQVV | DDDESGENQVVP |
pattern: DDD[DSYE][SEYDF][SEYGDA][SEGD][NSEGD][NSQELD][NQEVD][EVQD][SEVPD]
MKECELCNYPARMYCDSDQASLCWDCDAKVHCANFLVARHSRSLLCHICQSPTPWKASGSKLG
PTVSVCQRCANNCNGSDERSEIDEEREGANEDDDEFAGELDDDDDDDDSEDEDDDDDYSDDDDD
ESGENQVVPWSSTPPPPVASSSSSDDESSSNGRKRGIAESTMPFSLKRTRENADLGCHDDLGCS
SSQPNNDTAFAATAARRGSKDEEATSYGSFRPSKCLKRTLANSSVPPAAAVLSSLQRFTSGEDS
TATILEIRKLSKDPGAVDLDHHNRRI

### Similar gene clusters

### NC_056570 - Cluster 78 - Fatty_acid-lignan

### Gene cluster description

Download cluster GenBank file
NC_056570 - Gene Cluster 78. Type = fatty_acid-lignan. Location: 5617287 - 5694283 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))
plants/lignan: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Dirigent]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056570 - Cluster 79 - Terpene

### Gene cluster description

Download cluster GenBank file
NC_056570 - Gene Cluster 79. Type = terpene. Location: 11065795 - 11331195 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

No significant ClusterBlast hits found.

### NC_056570 - Cluster 80 - Putative

### Gene cluster description

Download cluster GenBank file
NC_056570 - Gene Cluster 80. Type = putative. Location: 21449781 - 21833882 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056570 - Cluster 81 - Saccharide-alkaloid

### Gene cluster description

Download cluster GenBank file
NC_056570 - Gene Cluster 81. Type = saccharide-alkaloid. Location: 22044508 - 22275765 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056570 - Cluster 82 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_056570 - Gene Cluster 82. Type = saccharide. Location: 25667245 - 25782663 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_056570 - Cluster 83 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_056570 - Gene Cluster 83. Type = cyclopeptide. Location: 28706304 - 29428941 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NC_056570 - Cluster 84 - Putative

### Gene cluster description

Download cluster GenBank file
NC_056570 - Gene Cluster 84. Type = putative. Location: 29143126 - 29280706 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_024868115 - Cluster 85 - Phenolamide

### Gene cluster description

Download cluster GenBank file
NW_024868115 - Gene Cluster 85. Type = phenolamide. Location: 1956 - 88597 nt. Click on genes for more information.
Show pHMM detection rules used
plants/phenolamide: (minimum(2,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_Arg_deC_N,YjeF_N,Putative_PNPOx,PNP_phzG_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,Pyridoxal_deC]) or minimum(2,[MatE,Orn_Arg_deC_N,YjeF_N,Putative_PNPOx,PNP_phzG_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,Orn_DAP_Arg_deC,Orn_Arg_deC_N]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_024868124 - Cluster 86 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_024868124 - Gene Cluster 86. Type = cyclopeptide. Location: 1 - 189126 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

The following known motifs were found in CDS LOC122063160
Location between 18047 and 18683
VS[AI]Y was found 2 times in this sequence
Sequence:
MADQTCQCNLKGPCQCSTHQHNRSRLSLWTFLGVFIFLAGVTALTVWLVYRPHKPHFAVSSVS
IYSLNMSTPSFISTNMQFTIITHNPNSRVSIYYDHFSAYVSYHNQAITTEVELQPLFQDPHSTV
VMSPIFGGGDVPVSSDTTNGLVVDENYGVVALRLVLLGELRWKAGVFWSRRYGIYVKCEMLVGF
KEDCAGQVPLLGNPECRVDV

### Similar gene clusters

### NW_024868169 - Cluster 87 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_024868169 - Gene Cluster 87. Type = cyclopeptide. Location: 1 - 173245 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

No repeats detected in this cluster.

### Similar gene clusters

### NW_024868210 - Cluster 88 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_024868210 - Gene Cluster 88. Type = cyclopeptide. Location: 1 - 160178 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NW_024868316 - Cluster 89 - Transporter_associated

### Gene cluster description

Download cluster GenBank file
NW_024868316 - Gene Cluster 89. Type = transporter_associated. Location: 78681 - 324179 nt. Click on genes for more information.
Show pHMM detection rules used
plants/transporter_associated: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[MatE/LTP_2/ABC2_membrane/ABC_tran]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_024868374 - Cluster 90 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_024868374 - Gene Cluster 90. Type = cyclopeptide. Location: 1 - 118553 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

The following known motifs were found in CDS LOC122064947
Location between 98517 and 116268
.L.Y..Y was found 2 times in this sequence
Sequence:
MVDRVVDKKICTEQSFSPLASFSLSPPSRSRLSPPATVGWGSPPATVGWEREHEDFHHLEPLL
NDSSKRYNSVDVQGSSVGGESITSYANANLLSIITFSWMGPLVALGYKKTLDLEDVPQLSSCDS
ANVVFSSIRNKIESDGNNGGQISSTKLVKALILLTWKEILWTGLLSIVCTLASYVGPYFIESFF
HYLKSSHQLKYKGYVLVFIFFLSKLIRCFSERHLFFQLRKMGNRVRTALFAIIYKKNLVLSSQA
KQGHTSGENVNLMTVDVEKTGFFSWYLHDIWRVPIQFVLALLNLYKRLGLASLVAFAATMILML
ANVPLIKLKEKIQGELMDSKDRRMKVTSEALRNMRILKLQGWEMKFLSKITERRKFETKWLKKL
LYTSAMASFVYSSTPLFVSMATFGFCELMGIQLNSGKILSALATFEMLQEPIHNLPDTISMILQ
IKVSLNRITSFLCLDDLDQNIVQKLPRDSTEVAIEIIKGNFSWDIHSPNLTLKDLNFQVKHGMK
VVVCGSVGSGKSSLISCILGEVPKISGSIKLKGKKAYVAQLPWIQSGKIVDNILFGKEMDKERY
EMILEACSLKKDLELFAFGDQTIVGERGINLSGGQKQRIQIARALYHDADIYLLDDPFSAVDAH
TGTHLFKECLLGILGSKTVIYVTHQVEFFPFADLILVMKDGKITQAGKYEEILSSGTDFVELVG
AHNKALAKLNSIEHGVALNNLINNEEDDNMLCGEKSNQDDEVRESENYKTEELVEPKGQLVQEE
KREKGGVNPLLYLKYVTTAYKGAFVPLILLAQILFELLQIVSSYWMVLDNPDSEDVRPHVMGCN
PIFIYIALTFGSSLCTFTRSMLIVTAGYKTSTLLFNKMHLCIFRAPLLFFDSTPSGRILNRVSI
DQSAADTSIPHKFEQLLISIIGFLGTIAVMSQVAWQMLIVSIPMTVACIWYQQYYISTARELSR
LTGVCQAPITQHFVESSLGSITIRCFGQEERFMDTNLKLVDGYFRPKFHFSGAIEWLCFRMDML
ASITYAIFFVFLISVPHGVLSPGIMGLAVTYGLSFSMHGIIWDLCSLENNIISIERIMQYTCIP
SEPPLVVEENKPDDEWPSQGKVDIVNLQVRYASHLPLVLRDLTCTFPGGIKIGIVGRTGSGKST
LVQALFHMLEPVAGQIWIDGINIFKIGLHDLRSRLSIIPQDPIMFEGTLRSNLDPLEDYTDEQI
WEVLDKCQLGDEIRKKEGKLDTSVNENGENWSIGQRQLVCLGRVLLKRCKVLVLDEATASMDTA
TEYLIQQTLRQHFSGSTVITIAHRITSILDIDMVLLLDNGLILEYDSPAKLLEIKSSSFAKLVK
EYTGRYNC

### Similar gene clusters

### NW_024868400 - Cluster 91 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_024868400 - Gene Cluster 91. Type = cyclopeptide. Location: 1 - 529537 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122065109
Repeat occurs 4 times in a sequence of 98 amino acids
Location between 507038 and >507563
Coverage of 57.14 %
Instances:
RHDRHDRHDRHDHH | RHDRHDRHDHHDHH | RHDRHDHHDHHRLR | RHDHHDHHRLRKDP |
pattern: RHD[RH]HD[RH]H[RD][RHL][RH][KRD][LHD][RHP]
MENHQEANGWKSVPQFGGWDQKSVNATNYSVVFNQARANRKQNKDRPFSAGNEEDLIARHDRH
DRHDRHDHHDHHRLRKDPVVRKKKTSNYFNCCLWA

### Similar gene clusters

### NW_024868405 - Cluster 92 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_024868405 - Gene Cluster 92. Type = cyclopeptide. Location: 12539 - 59852 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

No repeats detected in this cluster.

### Similar gene clusters

No significant ClusterBlast hits found.

### NW_024868422 - Cluster 93 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_024868422 - Gene Cluster 93. Type = cyclopeptide. Location: 1 - 110796 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

No repeats detected in this cluster.

### Similar gene clusters

No significant ClusterBlast hits found.

### NW_024868658 - Cluster 94 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_024868658 - Gene Cluster 94. Type = cyclopeptide. Location: 1 - 73811 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NW_024868771 - Cluster 95 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_024868771 - Gene Cluster 95. Type = cyclopeptide. Location: 30820 - 62812 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

No repeats detected in this cluster.

### Similar gene clusters

No significant ClusterBlast hits found.

### NW_024868871 - Cluster 96 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_024868871 - Gene Cluster 96. Type = cyclopeptide. Location: 1 - 53649 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

No repeats detected in this cluster.

### Similar gene clusters

### NW_024868887 - Cluster 97 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_024868887 - Gene Cluster 97. Type = cyclopeptide. Location: 1 - 43159 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

No repeats detected in this cluster.

### Similar gene clusters

No significant ClusterBlast hits found.

### NW_024868967 - Cluster 98 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_024868967 - Gene Cluster 98. Type = cyclopeptide. Location: 1 - 46394 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

No repeats detected in this cluster.

### Similar gene clusters

### NW_024868972 - Cluster 99 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_024868972 - Gene Cluster 99. Type = cyclopeptide. Location: 1 - 45962 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

No repeats detected in this cluster.

### Similar gene clusters

### NW_024869088 - Cluster 100 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_024869088 - Gene Cluster 100. Type = cyclopeptide. Location: 1 - 37316 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

No repeats detected in this cluster.

### Similar gene clusters

### NW_024869167 - Cluster 101 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_024869167 - Gene Cluster 101. Type = cyclopeptide. Location: 1 - 33088 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NW_024869172 - Cluster 102 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_024869172 - Gene Cluster 102. Type = cyclopeptide. Location: 1 - 32906 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

No repeats detected in this cluster.

### Similar gene clusters

### NW_024869429 - Cluster 103 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_024869429 - Gene Cluster 103. Type = cyclopeptide. Location: 1 - 19506 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NW_024869446 - Cluster 104 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_024869446 - Gene Cluster 104. Type = cyclopeptide. Location: 1 - 18409 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NW_024869731 - Cluster 105 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_024869731 - Gene Cluster 105. Type = cyclopeptide. Location: 1 - 401614 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

No repeats detected in this cluster.

### Similar gene clusters

No significant ClusterBlast hits found.

### NW_024869847 - Cluster 106 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_024869847 - Gene Cluster 106. Type = cyclopeptide. Location: 1 - 385394 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122068388
Repeat occurs 3 times in a sequence of 276 amino acids
Location between 97591 and 98621
Coverage of 6.52 %
Instances:
QSPAPA | QSPSPS | QSPASA |
pattern: QSP[AS][SP][AS]
MLIISSELEKIVHLLQMATFFGSPPFLSHPLTRIHHLTLASSQSPAPASPPPSSQPQSPSPSP
SLRTESLPEQQSPASAKVEQQKPIKPVTTTTKVDSTDWIASNLTRRFGLGAGVAWVGFLAIGVI
SEQIKTRREVSQQEANTRDVEKEEEVVLPNGIRYSEMRVGGGASPRPGDLVVIDLKGAVEGTGE
VFVDTFGRDKKPLALVMGSRPYTRGMCEGIEYALRSMKAGGKRRVVIPPSLGFGENGADLGGLQ
VPPSATVEYIVEVEKVSIAPA

### Similar gene clusters

### NW_024870494 - Cluster 107 - Lignan

### Gene cluster description

Download cluster GenBank file
NW_024870494 - Gene Cluster 107. Type = lignan. Location: 288726 - 350733 nt. Click on genes for more information.
Show pHMM detection rules used
plants/lignan: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Dirigent]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_024870495 - Cluster 108 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_024870495 - Gene Cluster 108. Type = cyclopeptide. Location: 1 - 317436 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

No repeats detected in this cluster.

### Similar gene clusters

### NW_024870497 - Cluster 109 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_024870497 - Gene Cluster 109. Type = cyclopeptide. Location: 1 - 315566 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

The following known motifs were found in CDS LOC122069426
Location between 280583 and 288451
.L.Y..Y was found 2 times in this sequence
Sequence:
MIEFLHYFSQMGTSEDLNNDMNIWIFFSQSSATIFFHGFSACSHIILLLVLSIFWACKRCMVP
TLDNSKPMLKNTYFLYYWLTIISCMGLSFFGLLLCILISLSLYRHGWSDLKLVTLLDFAFKTLT
WFGISVYLHIQFSHSSESRFPILLRIWWVFYFLMSCFHVVVHWKNSSLPILLWVSNVVDAIVGL
FFCYAGLFGKGREDAYFQLLEPLFKISNSQSDGDDREGLSVGGESVTPYANASFFSIFTFHWMN
PLLALGYAKILDLEDVPQVSNCDSANVVFACFRNKLESDNNGSSNDGQVSTHKLVNALIFSTWK
EILWTGLLSIVCTLASYVGPYLIVDFIEYLNSSHQLKYNGYVLVFMFFLSMLIKCLLERHLFFI
LRKMVIRVRAALFAIIYKKSLRLSNQSKQGHTCGENTNLLSVDVERIGFFSWYLHDIWRVPMQV
ALGLWILYIRLGLASFVAFVATLILILANVPLGKLQENFQGELMDTKDRRMKVTSEALRNMRIL
KLQGWEMRFLTRITEFRNFEARWLKKLLYASAMASFVYLIAPMFVSTVTFGCCVVMRIPLDSGN
ILSALATFEMLQKPIYNFPDTISMVVQTKVSLDRIASFLCLDDLPPNIIQNFPRDSVKIAIEII
KGNFSWDIHSPNLTLKDLNFQVYRGMRVAVCGFVGSGKSSLLSCILGEVPKLSGAIKLNGTKAY
VAQSPWIQSGTIVDNILFGKEMDKDRYEMILEACSLKKDLELYILGDQTVIGDRGVNLSGGQKQ
RIQIARALYHDADIYLLDDPFSAVDAQTGTHLFKECLLGILDSKTVIYVTHQVEFLHTADLILV
MRDGRITQAGKYEEILSSGTDFIELVGAHKKALEDLISIEHKATLDNSINDEEDGYSLYSDKSI
QDKEESKLKNYKTEKLVGLEGQLVQEEMREKGGVSLLVYWKYVTAAYKGALVPLILLAQILFQL
LIIVSSYWMVLTTPISKDVRPHVRASTLIFVYVALTIGSSLCVLIRSMLILTSGYKTTMLLFNK
MHLCIFRAPMSFIDSTPSGRILNRASIDQSAVDTSIPRQFEELLISIIEFLGIIAVMSQVAWKM
LIVFIPMIVTCIWFQQYYISAARELSRLGRVCQTPIIHHFSESSLGSTTIRCFDQEDRFMDTNL
KLIDGYSRPKFHFSGAMEWLCFRMDFLASITYAIFLVFLILIPKGVLSPGVIGLAVTYGLGFSM
QGVVWDLSNLENKIISIERILQYVCIPCEPPLVIEENMPDHEWPSQGKVDIIDLQVRYAQHLPL
VLRGITCSFPGGMKIGIVGRTGSGKSTLVQTLFRMFEPTAGQIWIDGINISNIGVHDLRSRLSI
IPQDPTMFEGTLRSNLDPLEKYTDEQIWEALDRCQLGDEVRKKEGKLDSIVAENGENWSMGQRQ
LVCLGRVLLKRSKVLVLDEATASVDTATDYLIQQTLRQHFSGSTIITIAHRITSILDNDMVLLL
DNAGLILEYDSPTKLLETKSSSFAKLVKEYTRRCTS

The following known motifs were found in CDS LOC122069426
Location between 280583 and 288451
.L.Y..Y was found 2 times in this sequence
Sequence:
MIEFLHYFSQMGTSEDLNNDMNIWIFFSQSSATIFFHGFSACSHIILLLVLSIFWACKRCMVP
TLDNSKPMLKNTYFLYYWLTIISCMGLSFFGLLLCILISLSLYRHGWSDLKLVTLLDFAFKTLT
WFGISVYLHIQFSHSSESRFPILLRIWWVFYFLMSCFHVVVHWKNSSLPILLWVSNVVDAIVGL
FFCYAGLFGKGREDAYFQLLEPLFKISNSQSDGDDREGLSVGGESVTPYANASFFSIFTFHWMN
PLLALGYAKILDLEDVPQVSNCDSANVVFACFRNKLESDNNGSSNDGQVSTHKLVNALIFSTWK
EILWTGLLSIVCTLASYVGPYLIVDFIEYLNSSHQLKYNGYVLVFMFFLSMLIKCLLERHLFFI
LRKMVIRVRAALFAIIYKKSLRLSNQSKQGHTCGENTNLLSVDVERIGFFSWYLHDIWRVPMQV
ALGLWILYIRLGLASFVAFVATLILILANVPLGKLQENFQGELMDTKDRRMKVTSEALRNMRIL
KLQGWEMRFLTRITEFRNFEARWLKKLLYASAMASFVYLIAPMFVSTVTFGCCVVMRIPLDSGN
ILSALATFEMLQKPIYNFPDTISMVVQTKVSLDRIASFLCLDDLPPNIIQNFPRDSVKIAIEII
KGNFSWDIHSPNLTLKDLNFQVYRGMRVAVCGFVGSGKSSLLSCILGEVPKLSGAIKLNGTKAY
VAQSPWIQSGTIVDNILFGKEMDKDRYEMILEACSLKKDLELYILGDQTVIGDRGVNLSGGQKQ
RIQIARALYHDADIYLLDDPFSAVDAQTGTHLFKECLLGILDSKTVIYVTHQVEFLHTADLILV
MRDGRITQAGKYEEILSSGTDFIELVGAHKKALEDLISIEHKATLDNSINDEEDGYSLYSDKSI
QDKEESKLKNYKTEKLVGLEGQLVQEEMREKGGVSLLVYWKYVTAAYKGALVPLILLAQILFQL
LIIVSSYWMVLTTPISKDVRPHVRASTLIFVYVALTIGSSLCVLIRSMLILTSGYKTTMLLFNK
MHLCIFRAPMSFIDSTPSGRILNRASIDQSAVDTSIPRQFEELLISIIEFLGIIAVMSQVAWKM
LIVFIPMIVTCIWFQQYYISAARELSRLGRVCQTPIIHHFSESSLGSTTIRCFDQEDRFMDTNL
KLIDGYSRPKFHFSGAMEWLCFRMDFLASITYAIFLVFLILIPKGVLSPGVIGLAVTYGLGFSM
QGVVWDLSNLENKIISIERILQYVCIPCEPPLVIEENMPDHEWPSQGKVDIIDLQVRYAQHLPL
VLRGITCSFPGGMKIGIVGRTGSGKSTLVQTLFRMFEPTAGQIWIDGINISNIGVHDLRSRLSI
IPQDPTMFEGTLRSNLDPLEKYTDEQIWEALDRCQLGDEVRKKEGKLDSIVAENGENWSMGQRQ
LVCLGRVLLKRSKVLVLDEATASVDTATDYLIQQTLRQHFSGSTIITIAHRITSILDNDMVLLL
DNGLILEYDSPTKLLETKSSSFAKLVKEYTRRCTS

The following known motifs were found in CDS LOC122069426
Location between 280583 and 286794
.L.Y..Y was found 2 times in this sequence
Sequence:
MIEFLHYFSQMGTSEDLNNDMNIWIFFSQSSATIFFHGFSACSHIILLLVLSIFWACKRCMVP
TLDNSKPMLKNTYFLYYWLTIISCMGLSFFGLLLCILISLSLYRHGWSDLKLVTLLDFAFKTLT
WFGISVYLHIQFSHSSESRFPILLRIWWVFYFLMSCFHVVVHWKNSSLPILLWVSNVVDAIVGL
FFCYAGLFGKGREDAYFQLLEPLFKISNSQSDGDDREGLSVGGESVTPYANASFFSIFTFHWMN
PLLALGYAKILDLEDVPQVSNCDSANVVFACFRNKLESDNNGSSNDGQVSTHKLVNALIFSTWK
EILWTGLLSIVCTLASYVGPYLIVDFIEYLNSSHQLKYNGYVLVFMFFLSMLIKCLLERHLFFI
LRKMVIRVRAALFAIIYKKSLRLSNQSKQGHTCGENTNLLSVDVERIGFFSWYLHDIWRVPMQV
ALGLWILYIRLGLASFVAFVATLILILANVPLGKLQENFQGELMDTKDRRMKVTSEALRNMRIL
KLQGWEMRFLTRITEFRNFEARWLKKLLYASAMASFVYLIAPMFVSTVTFGCCVVMRIPLDSGN
ILSALATFEMLQKPIYNFPDTISMVVQTKVSLDRIASFLCLDDLPPNIIQNFPRDSVKIAIEII
KGNFSWDIHSPNLTLKDLNFQVYRGMRVAVCGFVGSGKSSLLSCILGEVPKLSGAIKLNGTKAY
VAQSPWIQSGTIVDNILFGKEMDKDRYEMILEACSLKKDLELYILGDQTVIGDRGVNLSGGQKQ
RIQIARALYHDADIYLLDDPFSAVDAQTGTHLFKECLLGILDSKTVIYVTHQVEFLHTADLILV
MRDGRITQAGKYEEILSSGTDFIELVGAHKKALEDLISIEHKATLDNSINDEEDGYSLYSDKSI
QDKEESKLKNYKTEKLVGLEGQLVQEEMREKGGVSLLVYWKYVTAAYKGALVPLILLAQILFQL
LIIVSSYWMVLTTPISKDVRPHVRASTLIFVYVALTIGSSLCVLIRSMLILTSGYKTTMLLFNK
MHLCIFRAPMSFIDSTPSGRILNRASIDQSAVDTSIPRQFEELLISIIEFLGIIAVMSQVAWKM
LIVFIPMIVTCIWFQVLLVWQSHMGLVSVCKGLYGILVISRTKSYPLKEYCSTSASLVSLLWL

### Similar gene clusters

### NW_024870518 - Cluster 110 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_024870518 - Gene Cluster 110. Type = cyclopeptide. Location: 88488 - 134940 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

No repeats detected in this cluster.

### Similar gene clusters

No significant ClusterBlast hits found.

### NW_024870581 - Cluster 111 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_024870581 - Gene Cluster 111. Type = cyclopeptide. Location: 1 - 240977 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NW_024870586 - Cluster 112 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_024870586 - Gene Cluster 112. Type = cyclopeptide. Location: 1 - 247233 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NW_024870639 - Cluster 113 - Terpene-alkaloid

### Gene cluster description

Download cluster GenBank file
NW_024870639 - Gene Cluster 113. Type = terpene-alkaloid. Location: 560333 - 704711 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_024870659 - Cluster 114 - Fatty_acid

### Gene cluster description

Download cluster GenBank file
NW_024870659 - Gene Cluster 114. Type = fatty_acid. Location: 81478 - 149426 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NW_024870669 - Cluster 115 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_024870669 - Gene Cluster 115. Type = cyclopeptide. Location: 1 - 404052 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

No repeats detected in this cluster.

### Similar gene clusters

### NW_024870673 - Cluster 116 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NW_024870673 - Gene Cluster 116. Type = cyclopeptide. Location: 1 - 230815 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters