Identified secondary metabolite clusters

Cluster Type From To Size (kb) Core domains Product/substrate predicted by subgroup Most similar known cluster MIBiG BGC-ID
The following clusters are from record NC_091661.1:
Cluster 1Fatty_acid259782362604770869.472OG-FeII_Oxy, DIOX_N, FA_desaturase---
Cluster 2Saccharide321926273228553592.913Beta_HSD, AMP-binding, Acetyltransf_1, Cellulose_synt---
The following clusters are from record NC_091662.1:
Cluster 3Putative41011644203790102.632OG-FeII_Oxy, DIOX_N, ECH_2, adh_short---
Cluster 4Putative43099844582008272.022OG-FeII_Oxy, DIOX_N, ECH_2---
Cluster 5Putative5634481571687482.39Aminotran_1_2, Methyltransf_11, Methyltransf_3---
Cluster 6Saccharide110463031110311856.81Glyco_hydro_1, Methyltransf_11, p450---
The following clusters are from record NC_091663.1:
Cluster 7Saccharide14221071561016138.91AMP-binding, Amino_oxidase, Glyco_hydro_1, Lipoxygenase---
Cluster 8Terpene6006947606188254.94PRISE, Prenyltransf---
Cluster 9Fatty_acid70055567171508165.952OG-FeII_Oxy, DIOX_N, FA_hydroxylase, adh_short_C2---
Cluster 10Polyketide86889968858114169.12Chal_sti_synt_C, FAE1_CUT1_RppA, p450---
Cluster 11Saccharide2731172627519809208.08Glyco_hydro_1, p450---
Cluster 12Saccharide-Terpene288863372897893792.60Glyco_hydro_1, Methyltransf_11, Terpene_synth, Terpene_synth_C, p450---
Cluster 13Terpene348682903492188653.60Acetyltransf_1, Chalcone_2, Terpene_synth, Terpene_synth_C---
The following clusters are from record NC_091664.1:
Cluster 14Saccharide-Polyketide432342663719231.38Cellulose_synt, Chal_sti_synt_C, Chal_sti_synt_N, p450---
Cluster 15Cyclopeptide17423712101242358.87BURP---
The following clusters are from record NC_091665.1:
Cluster 16Putative21821452373424191.282OG-FeII_Oxy, DIOX_N, Methyltransf_11, Methyltransf_7---
Cluster 17Cyclopeptide11924876130116771086.80BURP---
Cluster 18Cyclopeptide12190778139162381725.46BURP---
Cluster 19Saccharide1773075918193645462.89UDPGT_2, p450flavonoid-6, oleananes-6--
Cluster 20Saccharide332556383330307847.442OG-FeII_Oxy, DIOX_N, Glycos_transf_1, Methyltransf_3---
Cluster 21Alkaloid-Fatty_acid3882249139256718434.23BBE, FAD_binding_4, FA_hydroxylase, Methyltransf_11---
The following clusters are from record NC_091666.1:
Cluster 22Saccharide2754505427701285156.23AMP-binding, Glyco_hydro_1, UDPGT_2, p450small phenolic--
Cluster 23Cyclopeptide3012643730616424489.99BURP---
Cluster 24Cyclopeptide3014682530775531628.71BURP---
The following clusters are from record NC_091667.1:
Cluster 25Saccharide-Fatty_acid766822895016128.19FA_hydroxylase, Transferase, UDPGT_2flavonoid-3, oleananes-3--
Cluster 26Polyketide2680492926966585161.66Chal_sti_synt_C, Chalcone, FAE1_CUT1_RppA, Methyltransf_11---
Cluster 27Saccharide2887506829034452159.38Dimerisation, Methyltransf_2, UDPGT_2cytokinin-7--
Cluster 28Saccharide366667843674260075.823Beta_HSD, AMP-binding, Acetyltransf_1, Cellulose_synt---
The following clusters are from record NC_091668.1:
Cluster 29Saccharide5833996593083696.84Aminotran_1_2, Glycos_transf_2, SE---
Cluster 30Cyclopeptide1097778711298465320.68BURP---
Cluster 31Saccharide1305892813256255197.33ABC2_membrane, ABC_tran, Acetyltransf_1, Glyco_hydro_1, Transferase---
Cluster 32Cyclopeptide2568576826273452587.68BURP---
The following clusters are from record NC_091669.1:
Cluster 33Terpene19014872022427120.94ADH_N, ADH_zinc_N, Aldo_ket_red, Prenyltrans---
Cluster 34Saccharide1000354410272600269.06Epimerase, UDPGT_2cyanogenic glucoside-12, monoterpenoid-12, flavonoidalpha-chaconine/alpha-solanine (9% of genes show similarity)BGC0002722.2_c1
Cluster 35Saccharide340636683412758863.92AMP-binding, Amino_oxidase, Glycos_transf_1---
The following clusters are from record NC_091670.1:
Cluster 36Fatty_acid17880992032106244.01ADH_N, ADH_zinc_N, FA_desaturase_2, Peptidase_S10---
Cluster 37Polyketide44331834704135270.95Aminotran_1_2, Chal_sti_synt_C, FAE1_CUT1_RppA, adh_short---
Cluster 38Alkaloid-Fatty_acid3576635236002258235.91BBE, FAD_binding_4, FA_hydroxylase, Methyltransf_11, adh_short---
Cluster 39Terpene4113503441351339216.31Epimerase, Terpene_synth, Terpene_synth_C---
The following clusters are from record NC_091671.1:
Cluster 40Lignan710387865795155.41Aminotran_1_2, Dirigent, SQS_PSY---
Cluster 41Saccharide18062572025762219.50AMP-binding, Amino_oxidase, Glyco_hydro_1, Lipoxygenase, UDPGT_2---
Cluster 42Terpene6133389618859855.212OG-FeII_Oxy, DIOX_N, PRISE, Transferase---
Cluster 43Fatty_acid74668067668105201.302OG-FeII_Oxy, DIOX_N, FA_hydroxylase, adh_short_C2---
Cluster 44Saccharide2592223626051569129.33Abhydrolase_3, Epimerase, Glycos_transf_1---
Cluster 45Putative3725865437562031303.382OG-FeII_Oxy, Chalcone, Transferase, p450, polyprenyl_synt---
The following clusters are from record NC_091672.1:
Cluster 46Saccharide76644983018663.74HMGL-like, UDPGT_2, adh_shortflavonoid--
Cluster 47Saccharide1676902177274695.84ERG4_ERG24, Glycos_transf_2, oMT---
The following clusters are from record NC_091673.1:
Cluster 48Cyclopeptide60253466294676269.33BURP---
Cluster 49Alkaloid69255317189291263.76Aminotran_1_2, Cu_amine_oxid, MatE, p450---
Cluster 50Transporter_associated74904097646029155.62ABC_tran, Abhydrolase_3, Transferase---
Cluster 51Fatty_acid7940464802805087.59AMP-binding, Lipoxygenase, Transferase---
The following clusters are from record NC_091674.1:
Cluster 52Saccharide-Polyketide2468697624878218191.24AMP-binding, Chal_sti_synt_C, Chal_sti_synt_N, Glyco_hydro_1---
The following clusters are from record NC_091675.1:
Cluster 53Saccharide16369511846060209.11Methyltransf_11, UDPGT_2, p450small phenolic--
Cluster 54Saccharide4328809442113492.33Aminotran_1_2, Glycos_transf_2, SE---
Cluster 55Cyclopeptide65972247083438486.21BURP---
Cluster 56Cyclopeptide73269057564559237.65BURP---
Cluster 57Polyketide84417138624784183.07ABC2_membrane, ABC_tran, Acetyltransf_1, Chal_sti_synt_C, FAE1_CUT1_RppA, p450---
Cluster 58Cyclopeptide1748016217888426408.26BURP-alpha-chaconine/alpha-solanine (9% of genes show similarity)BGC0002722.2_c1
Cluster 59Putative2128416621517313233.15Methyltransf_7, p450---
The following clusters are from record NC_091676.1:
Cluster 60Cyclopeptide61634976489505326.01BURP---
Cluster 61Transporter_associated75291647649318120.15ABC_tran, Transferase---
Cluster 62Polyketide1282947212983875154.40Chal_sti_synt_C, ECH_2, Epimerase, FAE1_CUT1_RppA, MatE---
The following clusters are from record NC_091677.1:
Cluster 63Saccharide82853278411750126.42Cellulose_synt, UDPGT_2, p450flavonoid-2, oleananes-2--
Cluster 64Saccharide-Transporter_associated1101344311685514672.07Aminotran_3, Epimerase, LTP_2, UDPGT_2, p450cyanogenic glucoside-10, monoterpenoid-10, flavonoidalpha-chaconine/alpha-solanine (27% of genes show similarity)BGC0002722.2_c1
Cluster 65Transporter_associated2420232824620869418.542OG-FeII_Oxy, ABC2_membrane, ABC_tran, Aminotran_1_2, DIOX_N---
Cluster 66Terpene2982985029952762122.91His_biosynth, SQHop_cyclase_C, SQHop_cyclase_N, Trp_syntAbeta-amyrin-2, triterpene-2, Cycloartenol--
Cluster 67Saccharide334049943348332078.33AMP-binding, Amino_oxidase, Glycos_transf_1---

NC_091661 - Cluster 1 - Fatty_acid

Gene cluster description

Download cluster GenBank file
NC_091661 - Gene Cluster 1. Type = fatty_acid. Location: 25978236 - 26047708 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091661 - Cluster 2 - Saccharide

Gene cluster description

Download cluster GenBank file
NC_091661 - Gene Cluster 2. Type = saccharide. Location: 32192627 - 32285535 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091662 - Cluster 3 - Putative

Gene cluster description

Download cluster GenBank file
NC_091662 - Gene Cluster 3. Type = putative. Location: 4101164 - 4203790 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091662 - Cluster 4 - Putative

Gene cluster description

Download cluster GenBank file
NC_091662 - Gene Cluster 4. Type = putative. Location: 4309984 - 4582008 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091662 - Cluster 5 - Putative

Gene cluster description

Download cluster GenBank file
NC_091662 - Gene Cluster 5. Type = putative. Location: 5634481 - 5716874 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091662 - Cluster 6 - Saccharide

Gene cluster description

Download cluster GenBank file
NC_091662 - Gene Cluster 6. Type = saccharide. Location: 11046303 - 11103118 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091663 - Cluster 7 - Saccharide

Gene cluster description

Download cluster GenBank file
NC_091663 - Gene Cluster 7. Type = saccharide. Location: 1422107 - 1561016 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091663 - Cluster 8 - Terpene

Gene cluster description

Download cluster GenBank file
NC_091663 - Gene Cluster 8. Type = terpene. Location: 6006947 - 6061882 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091663 - Cluster 9 - Fatty_acid

Gene cluster description

Download cluster GenBank file
NC_091663 - Gene Cluster 9. Type = fatty_acid. Location: 7005556 - 7171508 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091663 - Cluster 10 - Polyketide

Gene cluster description

Download cluster GenBank file
NC_091663 - Gene Cluster 10. Type = polyketide. Location: 8688996 - 8858114 nt. Click on genes for more information.
Show pHMM detection rules used
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091663 - Cluster 11 - Saccharide

Gene cluster description

Download cluster GenBank file
NC_091663 - Gene Cluster 11. Type = saccharide. Location: 27311726 - 27519809 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091663 - Cluster 12 - Saccharide-terpene

Gene cluster description

Download cluster GenBank file
NC_091663 - Gene Cluster 12. Type = saccharide-terpene. Location: 28886337 - 28978937 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091663 - Cluster 13 - Terpene

Gene cluster description

Download cluster GenBank file
NC_091663 - Gene Cluster 13. Type = terpene. Location: 34868290 - 34921886 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091664 - Cluster 14 - Saccharide-polyketide

Gene cluster description

Download cluster GenBank file
NC_091664 - Gene Cluster 14. Type = saccharide-polyketide. Location: 432342 - 663719 nt. Click on genes for more information.
Show pHMM detection rules used
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091664 - Cluster 15 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
NC_091664 - Gene Cluster 15. Type = cyclopeptide. Location: 1742371 - 2101242 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

No repeats detected in this cluster.

Similar gene clusters

NC_091665 - Cluster 16 - Putative

Gene cluster description

Download cluster GenBank file
NC_091665 - Gene Cluster 16. Type = putative. Location: 2182145 - 2373424 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091665 - Cluster 17 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
NC_091665 - Gene Cluster 17. Type = cyclopeptide. Location: 11924876 - 13011677 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in LOC103415379
Repeat occurs 6 times in a sequence of 373 amino acids
Location between 12467715 and 12468837
Coverage of 12.87 %
Instances:
KEVETPYV | KEVETPYV | KEVDAPYI | KEVEAPYI | KEVEAPYI
KEVLASKM |
pattern: KEV[DEL][AT][SP][YK][IVM]
MSYEKNESPNYITNHGTKEAHESKEVETPYVMGYGTKKGGKEVETPYVMSYEKNQRPNYITNY
GAKEAHESKEVDAPYILGYISARDTKEPKEVEAPYITGYISAQGTKVPKEVEAPYITAYISTHS
AKEKVGTKCKHHKHVNPPSFDTKHSQEPTSKGHEHHHMHTHSSSPMDHNEASWQGFFTFDDLHK
GMIMPLNFPNQEHSPFLPKDVADSIPFSTPQLPQLLQLLSIPQGSRDANNMAYALEQCEMKPIN
GETKLCATSLESMTDFVTKIIGAGVRFNILSTTHPITSTSITQNYILKEPKEVLASKMVFCHPL
AYPYAVFFCHHFEKDTKFFKVRLRGENGDKVEAMAVCPMDTSDWVPNHNIFGPL

Similar gene clusters

NC_091665 - Cluster 18 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
NC_091665 - Gene Cluster 18. Type = cyclopeptide. Location: 12190778 - 13916238 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in LOC103415379
Repeat occurs 6 times in a sequence of 373 amino acids
Location between 12467715 and 12468837
Coverage of 12.87 %
Instances:
KEVETPYV | KEVETPYV | KEVDAPYI | KEVEAPYI | KEVEAPYI
KEVLASKM |
pattern: KEV[DEL][AT][SP][YK][IVM]
MSYEKNESPNYITNHGTKEAHESKEVETPYVMGYGTKKGGKEVETPYVMSYEKNQRPNYITNY
GAKEAHESKEVDAPYILGYISARDTKEPKEVEAPYITGYISAQGTKVPKEVEAPYITAYISTHS
AKEKVGTKCKHHKHVNPPSFDTKHSQEPTSKGHEHHHMHTHSSSPMDHNEASWQGFFTFDDLHK
GMIMPLNFPNQEHSPFLPKDVADSIPFSTPQLPQLLQLLSIPQGSRDANNMAYALEQCEMKPIN
GETKLCATSLESMTDFVTKIIGAGVRFNILSTTHPITSTSITQNYILKEPKEVLASKMVFCHPL
AYPYAVFFCHHFEKDTKFFKVRLRGENGDKVEAMAVCPMDTSDWVPNHNIFGPL
Repeat found in LOC103424982
Repeat occurs 8 times in a sequence of 493 amino acids
Location between 13080264 and 13083123
Coverage of 16.23 %
Instances:
ATKSMKEVED | ATKSMKEVED | ATKSMKEVED | ATKSMKEVED | ATKSMKEVED
ATKEEVETPY | ATKEEVQTPY | ATKESKKEVK |
pattern: ATK[SE][SEM][KV][KEQ][EVT][EPV][YDK]
MASRFIIFCLLFVLQCRYATGARDVVKQQYKIGYGATKSMKEVEDSPNYITNCGNKQGRKGIG
ATKSMKEVEDLPNYITNYGNKQGIIGNGATKSMKEVEDLPNYITNYGNKQGIIGNGATKSMKEV
EDLPNYITNYGNKQGRKGIGATKSMKEVEDIPNYITNYGGRKGAMTPYTMSYATKEEVETPYTM
SYATKEEVQTPYTMNYATKESKKEVKTPYTMSYAAKEEVETPYKMSYGTEEVEPSHEHVHIHMH
PQSQPHMDHNEASKQGFFTFDDLHCGMRMPLHFPNQEHSRFLPKEVADSIPFSTPHIPQIRQLF
SIPQGSQEAKNVAYALEQCEMKPITGETKFCATSLESMTNFVTKIIGSGVRFNILSTEHPTTST
SITQRYTILEEPKQVLASKMVFCHPLAYPYAVFFCHHFERDTKFFKVKLGGENGDKVQAVAVCH
MDTSDWDPAHDLFALLGIKASASSPVCHFLPENHLVWIPSPATSAI
Repeat found in LOC103424982
Repeat occurs 7 times in a sequence of 465 amino acids
Location between 13080264 and 13083123
Coverage of 10.54 %
Instances:
ATKSMKE | ATKSMKE | ATKSMKE | ATKSMKE | ATKEEVE
ATKEEVQ | ATKESKK |
pattern: ATK[SE][SEM][KV][KEQ]
MASRFIIFCLLFVLQCRYATGARDVVKQQYKIGYGATKSMKEVEDSPNYITNCGNKQGRKGIG
ATKSMKEVEDLPNYITNYGNKQGIIGNGATKSMKEVEDLPNYITNYGNKQGIIGNGATKSMKEV
EDIPNYITNYGGRKGAMTPYTMSYATKEEVETPYTMSYATKEEVQTPYTMNYATKESKKEVKTP
YTMSYAAKEEVETPYKMSYGTEEVEPSHEHVHIHMHPQSQPHMDHNEASKQGFFTFDDLHCGMR
MPLHFPNQEHSRFLPKEVADSIPFSTPHIPQIRQLFSIPQGSQEAKNVAYALEQCEMKPITGET
KFCATSLESMTNFVTKIIGSGVRFNILSTEHPTTSTSITQRYTILEEPKQVLASKMVFCHPLAY
PYAVFFCHHFERDTKFFKVKLGGENGDKVQAVAVCHMDTSDWDPAHDLFALLGIKASASSPVCH
FLPENHLVWIPSPATSAI
Repeat found in LOC103424982
Repeat occurs 7 times in a sequence of 465 amino acids
Location between 13080264 and 13083123
Coverage of 10.54 %
Instances:
ATKSMKE | ATKSMKE | ATKSMKE | ATKSMKE | ATKEEVE
ATKEEVQ | ATKESKK |
pattern: ATK[SE][SEM][KV][KEQ]
MASRFIIFCLLFVLQCRYATGARDVVKQQYKIGYGATKSMKEVEDSPNYITNCGNKQGRKGIG
ATKSMKEVEDLPNYITNYGNKQGIIGNGATKSMKEVEDLPNYITNYGNKQGRKGIGATKSMKEV
EDIPNYITNYGGRKGAMTPYTMSYATKEEVETPYTMSYATKEEVQTPYTMNYATKESKKEVKTP
YTMSYAAKEEVETPYKMSYGTEEVEPSHEHVHIHMHPQSQPHMDHNEASKQGFFTFDDLHCGMR
MPLHFPNQEHSRFLPKEVADSIPFSTPHIPQIRQLFSIPQGSQEAKNVAYALEQCEMKPITGET
KFCATSLESMTNFVTKIIGSGVRFNILSTEHPTTSTSITQRYTILEEPKQVLASKMVFCHPLAY
PYAVFFCHHFERDTKFFKVKLGGENGDKVQAVAVCHMDTSDWDPAHDLFALLGIKASASSPVCH
FLPENHLVWIPSPATSAI
Repeat found in LOC103424982
Repeat occurs 7 times in a sequence of 465 amino acids
Location between 13080264 and 13083123
Coverage of 10.54 %
Instances:
ATKSMKE | ATKSMKE | ATKSMKE | ATKSMKE | ATKEEVE
ATKEEVQ | ATKESKK |
pattern: ATK[SE][SEM][KV][KEQ]
MASRFIIFCLLFVLQCRYATGARDVVKQQYKIGYGATKSMKEVEDLPNYITNYGNKQGIIGNG
ATKSMKEVEDLPNYITNYGNKQGIIGNGATKSMKEVEDLPNYITNYGNKQGRKGIGATKSMKEV
EDIPNYITNYGGRKGAMTPYTMSYATKEEVETPYTMSYATKEEVQTPYTMNYATKESKKEVKTP
YTMSYAAKEEVETPYKMSYGTEEVEPSHEHVHIHMHPQSQPHMDHNEASKQGFFTFDDLHCGMR
MPLHFPNQEHSRFLPKEVADSIPFSTPHIPQIRQLFSIPQGSQEAKNVAYALEQCEMKPITGET
KFCATSLESMTNFVTKIIGSGVRFNILSTEHPTTSTSITQRYTILEEPKQVLASKMVFCHPLAY
PYAVFFCHHFERDTKFFKVKLGGENGDKVQAVAVCHMDTSDWDPAHDLFALLGIKASASSPVCH
FLPENHLVWIPSPATSAI
Repeat found in LOC103424982
Repeat occurs 8 times in a sequence of 492 amino acids
Location between 13080264 and 13083123
Coverage of 16.26 %
Instances:
ATKSMKEVED | ATKSMKEVED | ATKSMKEVED | ATKSMKEVED | ATKSMKEVED
ATKEEVETPY | ATKEEVQTPY | ATKESKKEVK |
pattern: ATK[SE][SEM][KV][KEQ][EVT][EPV][YDK]
MASRFIIFCLLFVLCRYATGARDVVKQQYKIGYGATKSMKEVEDSPNYITNCGNKQGRKGIGA
TKSMKEVEDLPNYITNYGNKQGIIGNGATKSMKEVEDLPNYITNYGNKQGIIGNGATKSMKEVE
DLPNYITNYGNKQGRKGIGATKSMKEVEDIPNYITNYGGRKGAMTPYTMSYATKEEVETPYTMS
YATKEEVQTPYTMNYATKESKKEVKTPYTMSYAAKEEVETPYKMSYGTEEVEPSHEHVHIHMHP
QSQPHMDHNEASKQGFFTFDDLHCGMRMPLHFPNQEHSRFLPKEVADSIPFSTPHIPQIRQLFS
IPQGSQEAKNVAYALEQCEMKPITGETKFCATSLESMTNFVTKIIGSGVRFNILSTEHPTTSTS
ITQRYTILEEPKQVLASKMVFCHPLAYPYAVFFCHHFERDTKFFKVKLGGENGDKVQAVAVCHM
DTSDWDPAHDLFALLGIKASASSPVCHFLPENHLVWIPSPATSAI
Repeat found in LOC103424982
Repeat occurs 7 times in a sequence of 464 amino acids
Location between 13080264 and 13083123
Coverage of 10.56 %
Instances:
ATKSMKE | ATKSMKE | ATKSMKE | ATKSMKE | ATKEEVE
ATKEEVQ | ATKESKK |
pattern: ATK[SE][SEM][KV][KEQ]
MASRFIIFCLLFVLCRYATGARDVVKQQYKIGYGATKSMKEVEDLPNYITNYGNKQGIIGNGA
TKSMKEVEDLPNYITNYGNKQGIIGNGATKSMKEVEDLPNYITNYGNKQGRKGIGATKSMKEVE
DIPNYITNYGGRKGAMTPYTMSYATKEEVETPYTMSYATKEEVQTPYTMNYATKESKKEVKTPY
TMSYAAKEEVETPYKMSYGTEEVEPSHEHVHIHMHPQSQPHMDHNEASKQGFFTFDDLHCGMRM
PLHFPNQEHSRFLPKEVADSIPFSTPHIPQIRQLFSIPQGSQEAKNVAYALEQCEMKPITGETK
FCATSLESMTNFVTKIIGSGVRFNILSTEHPTTSTSITQRYTILEEPKQVLASKMVFCHPLAYP
YAVFFCHHFERDTKFFKVKLGGENGDKVQAVAVCHMDTSDWDPAHDLFALLGIKASASSPVCHF
LPENHLVWIPSPATSAI

Similar gene clusters

NC_091665 - Cluster 19 - Saccharide

Gene cluster description

Download cluster GenBank file
NC_091665 - Gene Cluster 19. Type = saccharide. Location: 17730759 - 18193645 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091665 - Cluster 20 - Saccharide

Gene cluster description

Download cluster GenBank file
NC_091665 - Gene Cluster 20. Type = saccharide. Location: 33255638 - 33303078 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091665 - Cluster 21 - Alkaloid-fatty_acid

Gene cluster description

Download cluster GenBank file
NC_091665 - Gene Cluster 21. Type = alkaloid-fatty_acid. Location: 38822491 - 39256718 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091666 - Cluster 22 - Saccharide

Gene cluster description

Download cluster GenBank file
NC_091666 - Gene Cluster 22. Type = saccharide. Location: 27545054 - 27701285 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091666 - Cluster 23 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
NC_091666 - Gene Cluster 23. Type = cyclopeptide. Location: 30126437 - 30616424 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in LOC103437716
Repeat occurs 3 times in a sequence of 363 amino acids
Location between 30230705 and 30232678
Coverage of 5.79 %
Instances:
SGNSSED | SGNSSED | SGNQSRP |
pattern: SGN[SQ]S[RE][DP]
MEYRNDYPNLSSGNSSEDERSDQFSDSGNSSEDDSASETVHSSISDSESVADSGSSSSGNQSR
PFGDGLVPLFDGDRVHDLIKQRFLSSLGLLGAQASVVAVHRNSYSSLVGQARLRSFQIYLKAVE
EKCGGNPNVKYAWFAPSSKDEISKIICHGFGNFEQPQTNGAFGNGVYLAPDDSPLQLVESLNVD
EDGLRHLLLCRVILGRPEVVCPGSKQHHPSSEQFDSGIDSIFAPKKYIVWSTHMNTHILPEYVI
SFRAPNCLKELLKVQEPVKKPTSPWMPFPALIGVLSKFLPPPSIALISKHYKDHRENVITRQQL
IQKVRQIAGDKLLASIIKSFRAKQIKTMQTKAMPPAEAGVRWTV
Repeat found in LOC103428291
Repeat occurs 4 times in a sequence of 848 amino acids
Location between 30288455 and 30291002
Coverage of 3.77 %
Instances:
EIHGHVLK | EIHGFVVK | EIHGLVVK | EIHSYLLR |
pattern: EIH[GS][YLFH][LV][LV][RK]
MAFVVPQGWYSIHYPAIQSEAASHYKFRRLSTPCFLSFTSKFHNFCSGIQFLKAPSRKLILGR
GFSRESSLLEVSSAGQLIKDYVEDGNFEDAITIYVKVLEFGLPVSEFRFFPCLIKAFGGLCDAG
KVREIHGHVLKLGVLDDVYDVNSLLGVYWKCWAVEDAIQLFEKMRERDLVSWNTMISGLCHWGD
YMGSLRMFSRMVNDYWVLPNRVACLSALSSCSSVQCSVHGREIHGFVVKREIATDQFLVSGLID
MYMKCGDVKNAEYVFGSIVYEESIRGNPVIWNVMISGYVANGRLPQAVELFLEMLEIGLSPDTS
TMVAVIGLCSQLLDLALGRQIHKFCYSIQLNHDARVETALMDMYFKCGDSKAGLEIFQRSQNRN
IVMWGAVISNFAQSSRPHEALNLFHNHALEYGFVDSAIVLAVLRACSSLAVRPRGMEIHGLVVK
MGFDSDVFVGGALVDMYAKCRDMESAQIVFYRLPARDLVSWNALISGYTRNEFPDEALKAFLDM
QSDGVKPNAVTVASMLSVCAQLSVMKSCKEIHSYLLRQEFESNVLVSNSLITTYAKCGDMKSSW
AIFESMPERTEVSWNSILLGLGMHGHADETFGLFEKMEAAGMKPDHATFTALLSACSHAGRVEE
GLKYFKRMVEDFTIEPRLEQYTCMVDLLGRAGHLKHAYDIILAMPCTPDDRVWGSLLGSCKIHG
DERLAEVVSDHIFELDPTSIGYRTLLANLYEEYGKWNDVTRIRSDIKGRGLKKTPGCSWIEVDS
NVHVFMAGDQSHKQLEEIYATVECLTNEIRKAGYIPQSPTVSVRHDEVNHENLSSFKDDDLLFP
VASRNHSRTGSAELMIG
Repeat found in LOC103428291
Repeat occurs 4 times in a sequence of 848 amino acids
Location between 30288455 and 30291002
Coverage of 3.77 %
Instances:
EIHGHVLK | EIHGFVVK | EIHGLVVK | EIHSYLLR |
pattern: EIH[GS][YLFH][LV][LV][RK]
MAFVVPQGWYSIHYPAIQSEAASHYKFRRLSTPCFLSFTSKFHNFCSGIQFLKAPSRKLILGR
GFSRESSLLEVSSAGQLIKDYVEDGNFEDAITIYVKVLEFGLPVSEFRFFPCLIKAFGGLCDAG
KVREIHGHVLKLGVLDDVYDVNSLLGVYWKCWAVEDAIQLFEKMRERDLVSWNTMISGLCHWGD
YMGSLRMFSRMVNDYWVLPNRVACLSALSSCSSVQCSVHGREIHGFVVKREIATDQFLVSGLID
MYMKCGDVKNAEYVFGSIVYEESIRGNPVIWNVMISGYVANGRLPQAVELFLEMLEIGLSPDTS
TMVAVIGLCSQLLDLALGRQIHKFCYSIQLNHDARVETALMDMYFKCGDSKAGLEIFQRSQNRN
IVMWGAVISNFAQSSRPHEALNLFHNHALEYGFVDSAIVLAVLRACSSLAVRPRGMEIHGLVVK
MGFDSDVFVGGALVDMYAKCRDMESAQIVFYRLPARDLVSWNALISGYTRNEFPDEALKAFLDM
QSDGVKPNAVTVASMLSVCAQLSVMKSCKEIHSYLLRQEFESNVLVSNSLITTYAKCGDMKSSW
AIFESMPERTEVSWNSILLGLGMHGHADETFGLFEKMEAAGMKPDHATFTALLSACSHAGRVEE
GLKYFKRMVEDFTIEPRLEQYTCMVDLLGRAGHLKHAYDIILAMPCTPDDRVWGSLLGSCKIHG
DERLAEVVSDHIFELDPTSIGYRTLLANLYEEYGKWNDVTRIRSDIKGRGLKKTPGCSWIEVDS
NVHVFMAGDQSHKQLEEIYATVECLTNEIRKAGYIPQSPTVSVRHDEVNHENLSSFKDDDLLFP
VASRNHSRTGSAELMIG
Repeat found in LOC103428291
Repeat occurs 4 times in a sequence of 848 amino acids
Location between 30288455 and 30291002
Coverage of 3.77 %
Instances:
EIHGHVLK | EIHGFVVK | EIHGLVVK | EIHSYLLR |
pattern: EIH[GS][YLFH][LV][LV][RK]
MAFVVPQGWYSIHYPAIQSEAASHYKFRRLSTPCFLSFTSKFHNFCSGIQFLKAPSRKLILGR
GFSRESSLLEVSSAGQLIKDYVEDGNFEDAITIYVKVLEFGLPVSEFRFFPCLIKAFGGLCDAG
KVREIHGHVLKLGVLDDVYDVNSLLGVYWKCWAVEDAIQLFEKMRERDLVSWNTMISGLCHWGD
YMGSLRMFSRMVNDYWVLPNRVACLSALSSCSSVQCSVHGREIHGFVVKREIATDQFLVSGLID
MYMKCGDVKNAEYVFGSIVYEESIRGNPVIWNVMISGYVANGRLPQAVELFLEMLEIGLSPDTS
TMVAVIGLCSQLLDLALGRQIHKFCYSIQLNHDARVETALMDMYFKCGDSKAGLEIFQRSQNRN
IVMWGAVISNFAQSSRPHEALNLFHNHALEYGFVDSAIVLAVLRACSSLAVRPRGMEIHGLVVK
MGFDSDVFVGGALVDMYAKCRDMESAQIVFYRLPARDLVSWNALISGYTRNEFPDEALKAFLDM
QSDGVKPNAVTVASMLSVCAQLSVMKSCKEIHSYLLRQEFESNVLVSNSLITTYAKCGDMKSSW
AIFESMPERTEVSWNSILLGLGMHGHADETFGLFEKMEAAGMKPDHATFTALLSACSHAGRVEE
GLKYFKRMVEDFTIEPRLEQYTCMVDLLGRAGHLKHAYDIILAMPCTPDDRVWGSLLGSCKIHG
DERLAEVVSDHIFELDPTSIGYRTLLANLYEEYGKWNDVTRIRSDIKGRGLKKTPGCSWIEVDS
NVHVFMAGDQSHKQLEEIYATVECLTNEIRKAGYIPQSPTVSVRHDEVNHENLSSFKDDDLLFP
VASRNHSRTGSAELMIG
Repeat found in LOC103428291
Repeat occurs 4 times in a sequence of 848 amino acids
Location between 30288455 and 30291002
Coverage of 3.77 %
Instances:
EIHGHVLK | EIHGFVVK | EIHGLVVK | EIHSYLLR |
pattern: EIH[GS][YLFH][LV][LV][RK]
MAFVVPQGWYSIHYPAIQSEAASHYKFRRLSTPCFLSFTSKFHNFCSGIQFLKAPSRKLILGR
GFSRESSLLEVSSAGQLIKDYVEDGNFEDAITIYVKVLEFGLPVSEFRFFPCLIKAFGGLCDAG
KVREIHGHVLKLGVLDDVYDVNSLLGVYWKCWAVEDAIQLFEKMRERDLVSWNTMISGLCHWGD
YMGSLRMFSRMVNDYWVLPNRVACLSALSSCSSVQCSVHGREIHGFVVKREIATDQFLVSGLID
MYMKCGDVKNAEYVFGSIVYEESIRGNPVIWNVMISGYVANGRLPQAVELFLEMLEIGLSPDTS
TMVAVIGLCSQLLDLALGRQIHKFCYSIQLNHDARVETALMDMYFKCGDSKAGLEIFQRSQNRN
IVMWGAVISNFAQSSRPHEALNLFHNHALEYGFVDSAIVLAVLRACSSLAVRPRGMEIHGLVVK
MGFDSDVFVGGALVDMYAKCRDMESAQIVFYRLPARDLVSWNALISGYTRNEFPDEALKAFLDM
QSDGVKPNAVTVASMLSVCAQLSVMKSCKEIHSYLLRQEFESNVLVSNSLITTYAKCGDMKSSW
AIFESMPERTEVSWNSILLGLGMHGHADETFGLFEKMEAAGMKPDHATFTALLSACSHAGRVEE
GLKYFKRMVEDFTIEPRLEQYTCMVDLLGRAGHLKHAYDIILAMPCTPDDRVWGSLLGSCKIHG
DERLAEVVSDHIFELDPTSIGYRTLLANLYEEYGKWNDVTRIRSDIKGRGLKKTPGCSWIEVDS
NVHVFMAGDQSHKQLEEIYATVECLTNEIRKAGYIPQSPTVSVRHDEVNHENLSSFKDDDLLFP
VASRNHSRTGSAELMIG
Repeat found in LOC103437722
Repeat occurs 3 times in a sequence of 656 amino acids
Location between 30310343 and 30312314
Coverage of 3.66 %
Instances:
EIHGFVVK | EIHGLVVK | EIHSYLLR |
pattern: EIH[GS][YLF][LV][LV][RK]
MGSLRMFSRMVNDYWVLPNWVACLSALSSCSSVQCSVHGREIHGFVVKREIATDQFLVSGLID
MYMKCGDVKNAEYVFGSIVYEESIRGNPVIWNVMISGYVANGRLPQAVELFLEMLEIGLSPDTS
TMVAVIGLCSQLLDLALGRQIHKFCYSIQLNHDARVETALMDMYFKCGDSKAGLEIFQRSQNRN
IVMWGAVISNFAQSSRPHEALNLFHNHALEYGFVDSAIVLAVLRACSSLAVRPRGMEIHGLVVK
MGFDSDVFVGGALVDMYAKCRDMESAQIVFYRLPARDLVSWNALISGYTRNEFPDEALKAFLDM
QSDGVKPNAVTVASMLSVCAQLSVMKSCKEIHSYLLRQEFESNVLVSNSLITTYAKCGDMKSSW
AIFVSMPERTEVSWNSILLGLGMHGHADETFGLFEKMEAAGMKPDHATFTALLSACSHAGRVEE
GLKYFKRMVEDFTIEPRLEQYTCMVDLLGRAGHLKHAYDIILAMPCTPDDRVWGSLLGSCKIHG
DERLAEVVSDHIFELDPTSIGYRTLLANLYEEYGKWNDVTRIRSDIKGRGLKKTPGCSWIEVDS
NVHVFMAGDQSHKQLEEIYATVECLTNEIRKAGYIPQSPTVSVRHDEVNHENLSSFKDDDLLFP
VASRNHSRTGSAELMIG
Repeat found in LOC103437722
Repeat occurs 3 times in a sequence of 656 amino acids
Location between 30310343 and 30312314
Coverage of 3.66 %
Instances:
EIHGFVVK | EIHGLVVK | EIHSYLLR |
pattern: EIH[GS][YLF][LV][LV][RK]
MGSLRMFSRMVNDYWVLPNWVACLSALSSCSSVQCSVHGREIHGFVVKREIATDQFLVSGLID
MYMKCGDVKNAEYVFGSIVYEESIRGNPVIWNVMISGYVANGRLPQAVELFLEMLEIGLSPDTS
TMVAVIGLCSQLLDLALGRQIHKFCYSIQLNHDARVETALMDMYFKCGDSKAGLEIFQRSQNRN
IVMWGAVISNFAQSSRPHEALNLFHNHALEYGFVDSAIVLAVLRACSSLAVRPRGMEIHGLVVK
MGFDSDVFVGGALVDMYAKCRDMESAQIVFYRLPARDLVSWNALISGYTRNEFPDEALKAFLDM
QSDGVKPNAVTVASMLSVCAQLSVMKSCKEIHSYLLRQEFESNVLVSNSLITTYAKCGDMKSSW
AIFVSMPERTEVSWNSILLGLGMHGHADETFGLFEKMEAAGMKPDHATFTALLSACSHAGRVEE
GLKYFKRMVEDFTIEPRLEQYTCMVDLLGRAGHLKHAYDIILAMPCTPDDRVWGSLLGSCKIHG
DERLAEVVSDHIFELDPTSIGYRTLLANLYEEYGKWNDVTRIRSDIKGRGLKKTPGCSWIEVDS
NVHVFMAGDQSHKQLEEIYATVECLTNEIRKAGYIPQSPTVSVRHDEVNHENLSSFKDDDLLFP
VASRNHSRTGSAELMIG
Repeat found in LOC103437722
Repeat occurs 3 times in a sequence of 656 amino acids
Location between 30310343 and 30312314
Coverage of 3.66 %
Instances:
EIHGFVVK | EIHGLVVK | EIHSYLLR |
pattern: EIH[GS][YLF][LV][LV][RK]
MGSLRMFSRMVNDYWVLPNWVACLSALSSCSSVQCSVHGREIHGFVVKREIATDQFLVSGLID
MYMKCGDVKNAEYVFGSIVYEESIRGNPVIWNVMISGYVANGRLPQAVELFLEMLEIGLSPDTS
TMVAVIGLCSQLLDLALGRQIHKFCYSIQLNHDARVETALMDMYFKCGDSKAGLEIFQRSQNRN
IVMWGAVISNFAQSSRPHEALNLFHNHALEYGFVDSAIVLAVLRACSSLAVRPRGMEIHGLVVK
MGFDSDVFVGGALVDMYAKCRDMESAQIVFYRLPARDLVSWNALISGYTRNEFPDEALKAFLDM
QSDGVKPNAVTVASMLSVCAQLSVMKSCKEIHSYLLRQEFESNVLVSNSLITTYAKCGDMKSSW
AIFVSMPERTEVSWNSILLGLGMHGHADETFGLFEKMEAAGMKPDHATFTALLSACSHAGRVEE
GLKYFKRMVEDFTIEPRLEQYTCMVDLLGRAGHLKHAYDIILAMPCTPDDRVWGSLLGSCKIHG
DERLAEVVSDHIFELDPTSIGYRTLLANLYEEYGKWNDVTRIRSDIKGRGLKKTPGCSWIEVDS
NVHVFMAGDQSHKQLEEIYATVECLTNEIRKAGYIPQSPTVSVRHDEVNHENLSSFKDDDLLFP
VASRNHSRTGSAELMIG

Similar gene clusters

NC_091666 - Cluster 24 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
NC_091666 - Gene Cluster 24. Type = cyclopeptide. Location: 30146825 - 30775531 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in LOC103437716
Repeat occurs 3 times in a sequence of 363 amino acids
Location between 30230705 and 30232678
Coverage of 5.79 %
Instances:
SGNSSED | SGNSSED | SGNQSRP |
pattern: SGN[SQ]S[RE][DP]
MEYRNDYPNLSSGNSSEDERSDQFSDSGNSSEDDSASETVHSSISDSESVADSGSSSSGNQSR
PFGDGLVPLFDGDRVHDLIKQRFLSSLGLLGAQASVVAVHRNSYSSLVGQARLRSFQIYLKAVE
EKCGGNPNVKYAWFAPSSKDEISKIICHGFGNFEQPQTNGAFGNGVYLAPDDSPLQLVESLNVD
EDGLRHLLLCRVILGRPEVVCPGSKQHHPSSEQFDSGIDSIFAPKKYIVWSTHMNTHILPEYVI
SFRAPNCLKELLKVQEPVKKPTSPWMPFPALIGVLSKFLPPPSIALISKHYKDHRENVITRQQL
IQKVRQIAGDKLLASIIKSFRAKQIKTMQTKAMPPAEAGVRWTV
Repeat found in LOC103428291
Repeat occurs 4 times in a sequence of 848 amino acids
Location between 30288455 and 30291002
Coverage of 3.77 %
Instances:
EIHGHVLK | EIHGFVVK | EIHGLVVK | EIHSYLLR |
pattern: EIH[GS][YLFH][LV][LV][RK]
MAFVVPQGWYSIHYPAIQSEAASHYKFRRLSTPCFLSFTSKFHNFCSGIQFLKAPSRKLILGR
GFSRESSLLEVSSAGQLIKDYVEDGNFEDAITIYVKVLEFGLPVSEFRFFPCLIKAFGGLCDAG
KVREIHGHVLKLGVLDDVYDVNSLLGVYWKCWAVEDAIQLFEKMRERDLVSWNTMISGLCHWGD
YMGSLRMFSRMVNDYWVLPNRVACLSALSSCSSVQCSVHGREIHGFVVKREIATDQFLVSGLID
MYMKCGDVKNAEYVFGSIVYEESIRGNPVIWNVMISGYVANGRLPQAVELFLEMLEIGLSPDTS
TMVAVIGLCSQLLDLALGRQIHKFCYSIQLNHDARVETALMDMYFKCGDSKAGLEIFQRSQNRN
IVMWGAVISNFAQSSRPHEALNLFHNHALEYGFVDSAIVLAVLRACSSLAVRPRGMEIHGLVVK
MGFDSDVFVGGALVDMYAKCRDMESAQIVFYRLPARDLVSWNALISGYTRNEFPDEALKAFLDM
QSDGVKPNAVTVASMLSVCAQLSVMKSCKEIHSYLLRQEFESNVLVSNSLITTYAKCGDMKSSW
AIFESMPERTEVSWNSILLGLGMHGHADETFGLFEKMEAAGMKPDHATFTALLSACSHAGRVEE
GLKYFKRMVEDFTIEPRLEQYTCMVDLLGRAGHLKHAYDIILAMPCTPDDRVWGSLLGSCKIHG
DERLAEVVSDHIFELDPTSIGYRTLLANLYEEYGKWNDVTRIRSDIKGRGLKKTPGCSWIEVDS
NVHVFMAGDQSHKQLEEIYATVECLTNEIRKAGYIPQSPTVSVRHDEVNHENLSSFKDDDLLFP
VASRNHSRTGSAELMIG
Repeat found in LOC103428291
Repeat occurs 4 times in a sequence of 848 amino acids
Location between 30288455 and 30291002
Coverage of 3.77 %
Instances:
EIHGHVLK | EIHGFVVK | EIHGLVVK | EIHSYLLR |
pattern: EIH[GS][YLFH][LV][LV][RK]
MAFVVPQGWYSIHYPAIQSEAASHYKFRRLSTPCFLSFTSKFHNFCSGIQFLKAPSRKLILGR
GFSRESSLLEVSSAGQLIKDYVEDGNFEDAITIYVKVLEFGLPVSEFRFFPCLIKAFGGLCDAG
KVREIHGHVLKLGVLDDVYDVNSLLGVYWKCWAVEDAIQLFEKMRERDLVSWNTMISGLCHWGD
YMGSLRMFSRMVNDYWVLPNRVACLSALSSCSSVQCSVHGREIHGFVVKREIATDQFLVSGLID
MYMKCGDVKNAEYVFGSIVYEESIRGNPVIWNVMISGYVANGRLPQAVELFLEMLEIGLSPDTS
TMVAVIGLCSQLLDLALGRQIHKFCYSIQLNHDARVETALMDMYFKCGDSKAGLEIFQRSQNRN
IVMWGAVISNFAQSSRPHEALNLFHNHALEYGFVDSAIVLAVLRACSSLAVRPRGMEIHGLVVK
MGFDSDVFVGGALVDMYAKCRDMESAQIVFYRLPARDLVSWNALISGYTRNEFPDEALKAFLDM
QSDGVKPNAVTVASMLSVCAQLSVMKSCKEIHSYLLRQEFESNVLVSNSLITTYAKCGDMKSSW
AIFESMPERTEVSWNSILLGLGMHGHADETFGLFEKMEAAGMKPDHATFTALLSACSHAGRVEE
GLKYFKRMVEDFTIEPRLEQYTCMVDLLGRAGHLKHAYDIILAMPCTPDDRVWGSLLGSCKIHG
DERLAEVVSDHIFELDPTSIGYRTLLANLYEEYGKWNDVTRIRSDIKGRGLKKTPGCSWIEVDS
NVHVFMAGDQSHKQLEEIYATVECLTNEIRKAGYIPQSPTVSVRHDEVNHENLSSFKDDDLLFP
VASRNHSRTGSAELMIG
Repeat found in LOC103428291
Repeat occurs 4 times in a sequence of 848 amino acids
Location between 30288455 and 30291002
Coverage of 3.77 %
Instances:
EIHGHVLK | EIHGFVVK | EIHGLVVK | EIHSYLLR |
pattern: EIH[GS][YLFH][LV][LV][RK]
MAFVVPQGWYSIHYPAIQSEAASHYKFRRLSTPCFLSFTSKFHNFCSGIQFLKAPSRKLILGR
GFSRESSLLEVSSAGQLIKDYVEDGNFEDAITIYVKVLEFGLPVSEFRFFPCLIKAFGGLCDAG
KVREIHGHVLKLGVLDDVYDVNSLLGVYWKCWAVEDAIQLFEKMRERDLVSWNTMISGLCHWGD
YMGSLRMFSRMVNDYWVLPNRVACLSALSSCSSVQCSVHGREIHGFVVKREIATDQFLVSGLID
MYMKCGDVKNAEYVFGSIVYEESIRGNPVIWNVMISGYVANGRLPQAVELFLEMLEIGLSPDTS
TMVAVIGLCSQLLDLALGRQIHKFCYSIQLNHDARVETALMDMYFKCGDSKAGLEIFQRSQNRN
IVMWGAVISNFAQSSRPHEALNLFHNHALEYGFVDSAIVLAVLRACSSLAVRPRGMEIHGLVVK
MGFDSDVFVGGALVDMYAKCRDMESAQIVFYRLPARDLVSWNALISGYTRNEFPDEALKAFLDM
QSDGVKPNAVTVASMLSVCAQLSVMKSCKEIHSYLLRQEFESNVLVSNSLITTYAKCGDMKSSW
AIFESMPERTEVSWNSILLGLGMHGHADETFGLFEKMEAAGMKPDHATFTALLSACSHAGRVEE
GLKYFKRMVEDFTIEPRLEQYTCMVDLLGRAGHLKHAYDIILAMPCTPDDRVWGSLLGSCKIHG
DERLAEVVSDHIFELDPTSIGYRTLLANLYEEYGKWNDVTRIRSDIKGRGLKKTPGCSWIEVDS
NVHVFMAGDQSHKQLEEIYATVECLTNEIRKAGYIPQSPTVSVRHDEVNHENLSSFKDDDLLFP
VASRNHSRTGSAELMIG
Repeat found in LOC103428291
Repeat occurs 4 times in a sequence of 848 amino acids
Location between 30288455 and 30291002
Coverage of 3.77 %
Instances:
EIHGHVLK | EIHGFVVK | EIHGLVVK | EIHSYLLR |
pattern: EIH[GS][YLFH][LV][LV][RK]
MAFVVPQGWYSIHYPAIQSEAASHYKFRRLSTPCFLSFTSKFHNFCSGIQFLKAPSRKLILGR
GFSRESSLLEVSSAGQLIKDYVEDGNFEDAITIYVKVLEFGLPVSEFRFFPCLIKAFGGLCDAG
KVREIHGHVLKLGVLDDVYDVNSLLGVYWKCWAVEDAIQLFEKMRERDLVSWNTMISGLCHWGD
YMGSLRMFSRMVNDYWVLPNRVACLSALSSCSSVQCSVHGREIHGFVVKREIATDQFLVSGLID
MYMKCGDVKNAEYVFGSIVYEESIRGNPVIWNVMISGYVANGRLPQAVELFLEMLEIGLSPDTS
TMVAVIGLCSQLLDLALGRQIHKFCYSIQLNHDARVETALMDMYFKCGDSKAGLEIFQRSQNRN
IVMWGAVISNFAQSSRPHEALNLFHNHALEYGFVDSAIVLAVLRACSSLAVRPRGMEIHGLVVK
MGFDSDVFVGGALVDMYAKCRDMESAQIVFYRLPARDLVSWNALISGYTRNEFPDEALKAFLDM
QSDGVKPNAVTVASMLSVCAQLSVMKSCKEIHSYLLRQEFESNVLVSNSLITTYAKCGDMKSSW
AIFESMPERTEVSWNSILLGLGMHGHADETFGLFEKMEAAGMKPDHATFTALLSACSHAGRVEE
GLKYFKRMVEDFTIEPRLEQYTCMVDLLGRAGHLKHAYDIILAMPCTPDDRVWGSLLGSCKIHG
DERLAEVVSDHIFELDPTSIGYRTLLANLYEEYGKWNDVTRIRSDIKGRGLKKTPGCSWIEVDS
NVHVFMAGDQSHKQLEEIYATVECLTNEIRKAGYIPQSPTVSVRHDEVNHENLSSFKDDDLLFP
VASRNHSRTGSAELMIG
Repeat found in LOC103437722
Repeat occurs 3 times in a sequence of 656 amino acids
Location between 30310343 and 30312314
Coverage of 3.66 %
Instances:
EIHGFVVK | EIHGLVVK | EIHSYLLR |
pattern: EIH[GS][YLF][LV][LV][RK]
MGSLRMFSRMVNDYWVLPNWVACLSALSSCSSVQCSVHGREIHGFVVKREIATDQFLVSGLID
MYMKCGDVKNAEYVFGSIVYEESIRGNPVIWNVMISGYVANGRLPQAVELFLEMLEIGLSPDTS
TMVAVIGLCSQLLDLALGRQIHKFCYSIQLNHDARVETALMDMYFKCGDSKAGLEIFQRSQNRN
IVMWGAVISNFAQSSRPHEALNLFHNHALEYGFVDSAIVLAVLRACSSLAVRPRGMEIHGLVVK
MGFDSDVFVGGALVDMYAKCRDMESAQIVFYRLPARDLVSWNALISGYTRNEFPDEALKAFLDM
QSDGVKPNAVTVASMLSVCAQLSVMKSCKEIHSYLLRQEFESNVLVSNSLITTYAKCGDMKSSW
AIFVSMPERTEVSWNSILLGLGMHGHADETFGLFEKMEAAGMKPDHATFTALLSACSHAGRVEE
GLKYFKRMVEDFTIEPRLEQYTCMVDLLGRAGHLKHAYDIILAMPCTPDDRVWGSLLGSCKIHG
DERLAEVVSDHIFELDPTSIGYRTLLANLYEEYGKWNDVTRIRSDIKGRGLKKTPGCSWIEVDS
NVHVFMAGDQSHKQLEEIYATVECLTNEIRKAGYIPQSPTVSVRHDEVNHENLSSFKDDDLLFP
VASRNHSRTGSAELMIG
Repeat found in LOC103437722
Repeat occurs 3 times in a sequence of 656 amino acids
Location between 30310343 and 30312314
Coverage of 3.66 %
Instances:
EIHGFVVK | EIHGLVVK | EIHSYLLR |
pattern: EIH[GS][YLF][LV][LV][RK]
MGSLRMFSRMVNDYWVLPNWVACLSALSSCSSVQCSVHGREIHGFVVKREIATDQFLVSGLID
MYMKCGDVKNAEYVFGSIVYEESIRGNPVIWNVMISGYVANGRLPQAVELFLEMLEIGLSPDTS
TMVAVIGLCSQLLDLALGRQIHKFCYSIQLNHDARVETALMDMYFKCGDSKAGLEIFQRSQNRN
IVMWGAVISNFAQSSRPHEALNLFHNHALEYGFVDSAIVLAVLRACSSLAVRPRGMEIHGLVVK
MGFDSDVFVGGALVDMYAKCRDMESAQIVFYRLPARDLVSWNALISGYTRNEFPDEALKAFLDM
QSDGVKPNAVTVASMLSVCAQLSVMKSCKEIHSYLLRQEFESNVLVSNSLITTYAKCGDMKSSW
AIFVSMPERTEVSWNSILLGLGMHGHADETFGLFEKMEAAGMKPDHATFTALLSACSHAGRVEE
GLKYFKRMVEDFTIEPRLEQYTCMVDLLGRAGHLKHAYDIILAMPCTPDDRVWGSLLGSCKIHG
DERLAEVVSDHIFELDPTSIGYRTLLANLYEEYGKWNDVTRIRSDIKGRGLKKTPGCSWIEVDS
NVHVFMAGDQSHKQLEEIYATVECLTNEIRKAGYIPQSPTVSVRHDEVNHENLSSFKDDDLLFP
VASRNHSRTGSAELMIG
Repeat found in LOC103437722
Repeat occurs 3 times in a sequence of 656 amino acids
Location between 30310343 and 30312314
Coverage of 3.66 %
Instances:
EIHGFVVK | EIHGLVVK | EIHSYLLR |
pattern: EIH[GS][YLF][LV][LV][RK]
MGSLRMFSRMVNDYWVLPNWVACLSALSSCSSVQCSVHGREIHGFVVKREIATDQFLVSGLID
MYMKCGDVKNAEYVFGSIVYEESIRGNPVIWNVMISGYVANGRLPQAVELFLEMLEIGLSPDTS
TMVAVIGLCSQLLDLALGRQIHKFCYSIQLNHDARVETALMDMYFKCGDSKAGLEIFQRSQNRN
IVMWGAVISNFAQSSRPHEALNLFHNHALEYGFVDSAIVLAVLRACSSLAVRPRGMEIHGLVVK
MGFDSDVFVGGALVDMYAKCRDMESAQIVFYRLPARDLVSWNALISGYTRNEFPDEALKAFLDM
QSDGVKPNAVTVASMLSVCAQLSVMKSCKEIHSYLLRQEFESNVLVSNSLITTYAKCGDMKSSW
AIFVSMPERTEVSWNSILLGLGMHGHADETFGLFEKMEAAGMKPDHATFTALLSACSHAGRVEE
GLKYFKRMVEDFTIEPRLEQYTCMVDLLGRAGHLKHAYDIILAMPCTPDDRVWGSLLGSCKIHG
DERLAEVVSDHIFELDPTSIGYRTLLANLYEEYGKWNDVTRIRSDIKGRGLKKTPGCSWIEVDS
NVHVFMAGDQSHKQLEEIYATVECLTNEIRKAGYIPQSPTVSVRHDEVNHENLSSFKDDDLLFP
VASRNHSRTGSAELMIG

Similar gene clusters

NC_091667 - Cluster 25 - Saccharide-fatty_acid

Gene cluster description

Download cluster GenBank file
NC_091667 - Gene Cluster 25. Type = saccharide-fatty_acid. Location: 766822 - 895016 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091667 - Cluster 26 - Polyketide

Gene cluster description

Download cluster GenBank file
NC_091667 - Gene Cluster 26. Type = polyketide. Location: 26804929 - 26966585 nt. Click on genes for more information.
Show pHMM detection rules used
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091667 - Cluster 27 - Saccharide

Gene cluster description

Download cluster GenBank file
NC_091667 - Gene Cluster 27. Type = saccharide. Location: 28875068 - 29034452 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091667 - Cluster 28 - Saccharide

Gene cluster description

Download cluster GenBank file
NC_091667 - Gene Cluster 28. Type = saccharide. Location: 36666784 - 36742600 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091668 - Cluster 29 - Saccharide

Gene cluster description

Download cluster GenBank file
NC_091668 - Gene Cluster 29. Type = saccharide. Location: 5833996 - 5930836 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091668 - Cluster 30 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
NC_091668 - Gene Cluster 30. Type = cyclopeptide. Location: 10977787 - 11298465 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Similar gene clusters

NC_091668 - Cluster 31 - Saccharide

Gene cluster description

Download cluster GenBank file
NC_091668 - Gene Cluster 31. Type = saccharide. Location: 13058928 - 13256255 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091668 - Cluster 32 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
NC_091668 - Gene Cluster 32. Type = cyclopeptide. Location: 25685768 - 26273452 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in LOC103441689
Repeat occurs 7 times in a sequence of 314 amino acids
Location between 26140737 and 26143476
Coverage of 22.29 %
Instances:
DDDDDDDKEE | DDDDDDKEED | DDDDDKEEDD | DDDDKEEDDD | DDDKEEDDDD
DDDDSDEEDE | DDDSDEEDEY |
pattern: DDD[SDK][SDKE][DKE][DKE][DKE][DE][YDE]
MAPSLICSFVMRRTVILAECSNHQDQEDVARLALNLLETLDRSMRRITYERDGYTFNYLIDCG
YTYSVVADEDIGRESPHAFLNQVRKDFLGKYSAQFVKALIANSLSNELGSKLKEHMEYVAAKVS
KDEQVAMEYIDKNRGWHMRRKSKAPSLSYSFVAHGTVVLADWLQFDHTVSGLAVDYLSELPCSI
NKITYDRGGCTINYLLDSNFTYCVVAAKAMGRKIPLALLDQIKKDFTARFGGGLAVATVENSLN
KDFRSKLKERMRHAEVKAAQASKDEGVTMENIEKDEEEDDDDDDDKEEDDDDSDEEDEY

Similar gene clusters

NC_091669 - Cluster 33 - Terpene

Gene cluster description

Download cluster GenBank file
NC_091669 - Gene Cluster 33. Type = terpene. Location: 1901487 - 2022427 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091669 - Cluster 34 - Saccharide

Gene cluster description

Download cluster GenBank file
NC_091669 - Gene Cluster 34. Type = saccharide. Location: 10003544 - 10272600 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

Similar known gene clusters

NC_091669 - Cluster 35 - Saccharide

Gene cluster description

Download cluster GenBank file
NC_091669 - Gene Cluster 35. Type = saccharide. Location: 34063668 - 34127588 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091670 - Cluster 36 - Fatty_acid

Gene cluster description

Download cluster GenBank file
NC_091670 - Gene Cluster 36. Type = fatty_acid. Location: 1788099 - 2032106 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091670 - Cluster 37 - Polyketide

Gene cluster description

Download cluster GenBank file
NC_091670 - Gene Cluster 37. Type = polyketide. Location: 4433183 - 4704135 nt. Click on genes for more information.
Show pHMM detection rules used
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091670 - Cluster 38 - Alkaloid-fatty_acid

Gene cluster description

Download cluster GenBank file
NC_091670 - Gene Cluster 38. Type = alkaloid-fatty_acid. Location: 35766352 - 36002258 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091670 - Cluster 39 - Terpene

Gene cluster description

Download cluster GenBank file
NC_091670 - Gene Cluster 39. Type = terpene. Location: 41135034 - 41351339 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091671 - Cluster 40 - Lignan

Gene cluster description

Download cluster GenBank file
NC_091671 - Gene Cluster 40. Type = lignan. Location: 710387 - 865795 nt. Click on genes for more information.
Show pHMM detection rules used
plants/lignan: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Dirigent]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091671 - Cluster 41 - Saccharide

Gene cluster description

Download cluster GenBank file
NC_091671 - Gene Cluster 41. Type = saccharide. Location: 1806257 - 2025762 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091671 - Cluster 42 - Terpene

Gene cluster description

Download cluster GenBank file
NC_091671 - Gene Cluster 42. Type = terpene. Location: 6133389 - 6188598 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091671 - Cluster 43 - Fatty_acid

Gene cluster description

Download cluster GenBank file
NC_091671 - Gene Cluster 43. Type = fatty_acid. Location: 7466806 - 7668105 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091671 - Cluster 44 - Saccharide

Gene cluster description

Download cluster GenBank file
NC_091671 - Gene Cluster 44. Type = saccharide. Location: 25922236 - 26051569 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091671 - Cluster 45 - Putative

Gene cluster description

Download cluster GenBank file
NC_091671 - Gene Cluster 45. Type = putative. Location: 37258654 - 37562031 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091672 - Cluster 46 - Saccharide

Gene cluster description

Download cluster GenBank file
NC_091672 - Gene Cluster 46. Type = saccharide. Location: 766449 - 830186 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091672 - Cluster 47 - Saccharide

Gene cluster description

Download cluster GenBank file
NC_091672 - Gene Cluster 47. Type = saccharide. Location: 1676902 - 1772746 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091673 - Cluster 48 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
NC_091673 - Gene Cluster 48. Type = cyclopeptide. Location: 6025346 - 6294676 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in LOC103451960
Repeat occurs 7 times in a sequence of 816 amino acids
Location between 6129114 and 6132525
Coverage of 5.15 %
Instances:
EKEREI | EKEQRR | EKEKQR | EKEREK | EKERER
EKEEDL | EKERSR |
pattern: EKE[RKQE][QERDS][RLKI]
MIRTPFPPRPPGATGLLQRAPVPGIPGVRPIIPPVVRPILPIVTPAEKPQTTVYVGKIAPTVD
NEFMKYLLQLCGPVKSWKRAQDPTDGTPRRFGFCEFESAEGVLRALRLLTNLSIDGQDLVLNVN
QATREYLERVVKKKTENSKKLKEAEAAEKGDGSALDVEKIVPSNPSVQDSKEEDGNSSNKENDP
ANFGIVTDEDKEADREAMEKLTSLIEERIKNKPLPPPPPTPAPGDGTRNSNSALPAKSRDGDSD
VDITRNDAYEEKIDEEITSDNKTTSEQGSPQTSSHDRSRKQDRRSRDNERDMKREKEREIERYE
RETERERVRKEKEQRRKLEDAEHQYEKCLKDWEYREREKEKQRQYEKEREKERERKRRKEIIYE
EDDEDEDSRKKWRRSVLEEKRKRRLREKEEDLADRQKEEEEIADAKGRAEEEKQLQQERDALRD
SSGHVANGSEKAALAEEFGVQLKDKATEQDNGGDSGHENHIGDGTLQNGNSDDESTMTSVSASE
PQQSGSAPAKKLGFGLLGSGKRTAVPSVFNEEDDDAHKDKKMRPLVPIDYSTEELQAVQPISGT
APSNLAAAAEFAKRISNASSKEEKPVTEKERSRRSNDRSSHRDRDQNGDDSNRTRDEHREKTID
RDTDRDHAMNKPRTKDNKKLLDAKQLIDMIPKTKEELFSYEINWAIYEHHALHERMRPWISKKI
TEFLGEEETTLVDYIVSSTQEHVGAERMLQLLQSILDEEAEMFVLKMWRMLIFEIKKVETVHDR
GTLPTITPLLFSFKNSKHRCVLFLFSIRGCDLIHTPAFPFYASPFVFVP
Repeat found in LOC103451960
Repeat occurs 7 times in a sequence of 816 amino acids
Location between 6129114 and 6132525
Coverage of 5.15 %
Instances:
EKEREI | EKEQRR | EKEKQR | EKEREK | EKERER
EKEEDL | EKERSR |
pattern: EKE[RKQE][QERDS][RLKI]
MIRTPFPPRPPGATGLLQRAPVPGIPGVRPIIPPVVRPILPIVTPAEKPQTTVYVGKIAPTVD
NEFMKYLLQLCGPVKSWKRAQDPTDGTPRRFGFCEFESAEGVLRALRLLTNLSIDGQDLVLNVN
QATREYLERVVKKKTENSKKLKEAEAAEKGDGSALDVEKIVPSNPSVQDSKEEDGNSSNKENDP
ANFGIVTDEDKEADREAMEKLTSLIEERIKNKPLPPPPPTPAPGDGTRNSNSALPAKSRDGDSD
VDITRNDAYEEKIDEEITSDNKTTSEQGSPQTSSHDRSRKQDRRSRDNERDMKREKEREIERYE
RETERERVRKEKEQRRKLEDAEHQYEKCLKDWEYREREKEKQRQYEKEREKERERKRRKEIIYE
EDDEDEDSRKKWRRSVLEEKRKRRLREKEEDLADRQKEEEEIADAKGRAEEEKQLQQERDALRD
SSGHVANGSEKAALAEEFGVQLKDKATEQDNGGDSGHENHIGDGTLQNGNSDDESTMTSVSASE
PQQSGSAPAKKLGFGLLGSGKRTAVPSVFNEEDDDAHKDKKMRPLVPIDYSTEELQAVQPISGT
APSNLAAAAEFAKRISNASSKEEKPVTEKERSRRSNDRSSHRDRDQNGDDSNRTRDEHREKTID
RDTDRDHAMNKPRTKDNKKLLDAKQLIDMIPKTKEELFSYEINWAIYEHHALHERMRPWISKKI
TEFLGEEETTLVDYIVSSTQEHVGAERMLQLLQSILDEEAEMFVLKMWRMLIFEIKKVETVHDR
GTLPTITPLLFSFKNSKHRCVLFLFSIRGCDLIHTPAFPFYASPFVFVP
Repeat found in LOC103451960
Repeat occurs 7 times in a sequence of 816 amino acids
Location between 6129114 and 6132525
Coverage of 5.15 %
Instances:
EKEREI | EKEQRR | EKEKQR | EKEREK | EKERER
EKEEDL | EKERSR |
pattern: EKE[RKQE][QERDS][RLKI]
MIRTPFPPRPPGATGLLQRAPVPGIPGVRPIIPPVVRPILPIVTPAEKPQTTVYVGKIAPTVD
NEFMKYLLQLCGPVKSWKRAQDPTDGTPRRFGFCEFESAEGVLRALRLLTNLSIDGQDLVLNVN
QATREYLERVVKKKTENSKKLKEAEAAEKGDGSALDVEKIVPSNPSVQDSKEEDGNSSNKENDP
ANFGIVTDEDKEADREAMEKLTSLIEERIKNKPLPPPPPTPAPGDGTRNSNSALPAKSRDGDSD
VDITRNDAYEEKIDEEITSDNKTTSEQGSPQTSSHDRSRKQDRRSRDNERDMKREKEREIERYE
RETERERVRKEKEQRRKLEDAEHQYEKCLKDWEYREREKEKQRQYEKEREKERERKRRKEIIYE
EDDEDEDSRKKWRRSVLEEKRKRRLREKEEDLADRQKEEEEIADAKGRAEEEKQLQQERDALRD
SSGHVANGSEKAALAEEFGVQLKDKATEQDNGGDSGHENHIGDGTLQNGNSDDESTMTSVSASE
PQQSGSAPAKKLGFGLLGSGKRTAVPSVFNEEDDDAHKDKKMRPLVPIDYSTEELQAVQPISGT
APSNLAAAAEFAKRISNASSKEEKPVTEKERSRRSNDRSSHRDRDQNGDDSNRTRDEHREKTID
RDTDRDHAMNKPRTKDNKKLLDAKQLIDMIPKTKEELFSYEINWAIYEHHALHERMRPWISKKI
TEFLGEEETTLVDYIVSSTQEHVGAERMLQLLQSILDEEAEMFVLKMWRMLIFEIKKVETVHDR
GTLPTITPLLFSFKNSKHRCVLFLFSIRGCDLIHTPAFPFYASPFVFVP
Repeat found in LOC103451960
Repeat occurs 7 times in a sequence of 816 amino acids
Location between 6129114 and 6132525
Coverage of 5.15 %
Instances:
EKEREI | EKEQRR | EKEKQR | EKEREK | EKERER
EKEEDL | EKERSR |
pattern: EKE[RKQE][QERDS][RLKI]
MIRTPFPPRPPGATGLLQRAPVPGIPGVRPIIPPVVRPILPIVTPAEKPQTTVYVGKIAPTVD
NEFMKYLLQLCGPVKSWKRAQDPTDGTPRRFGFCEFESAEGVLRALRLLTNLSIDGQDLVLNVN
QATREYLERVVKKKTENSKKLKEAEAAEKGDGSALDVEKIVPSNPSVQDSKEEDGNSSNKENDP
ANFGIVTDEDKEADREAMEKLTSLIEERIKNKPLPPPPPTPAPGDGTRNSNSALPAKSRDGDSD
VDITRNDAYEEKIDEEITSDNKTTSEQGSPQTSSHDRSRKQDRRSRDNERDMKREKEREIERYE
RETERERVRKEKEQRRKLEDAEHQYEKCLKDWEYREREKEKQRQYEKEREKERERKRRKEIIYE
EDDEDEDSRKKWRRSVLEEKRKRRLREKEEDLADRQKEEEEIADAKGRAEEEKQLQQERDALRD
SSGHVANGSEKAALAEEFGVQLKDKATEQDNGGDSGHENHIGDGTLQNGNSDDESTMTSVSASE
PQQSGSAPAKKLGFGLLGSGKRTAVPSVFNEEDDDAHKDKKMRPLVPIDYSTEELQAVQPISGT
APSNLAAAAEFAKRISNASSKEEKPVTEKERSRRSNDRSSHRDRDQNGDDSNRTRDEHREKTID
RDTDRDHAMNKPRTKDNKKLLDAKQLIDMIPKTKEELFSYEINWAIYEHHALHERMRPWISKKI
TEFLGEEETTLVDYIVSSTQEHVGAERMLQLLQSILDEEAEMFVLKMWRMLIFEIKKVETVHDR
GTLPTITPLLFSFKNSKHRCVLFLFSIRGCDLIHTPAFPFYASPFVFVP

Similar gene clusters

NC_091673 - Cluster 49 - Alkaloid

Gene cluster description

Download cluster GenBank file
NC_091673 - Gene Cluster 49. Type = alkaloid. Location: 6925531 - 7189291 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091673 - Cluster 50 - Transporter_associated

Gene cluster description

Download cluster GenBank file
NC_091673 - Gene Cluster 50. Type = transporter_associated. Location: 7490409 - 7646029 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/transporter_associated: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[MatE/LTP_2/ABC2_membrane/ABC_tran]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091673 - Cluster 51 - Fatty_acid

Gene cluster description

Download cluster GenBank file
NC_091673 - Gene Cluster 51. Type = fatty_acid. Location: 7940464 - 8028050 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091674 - Cluster 52 - Saccharide-polyketide

Gene cluster description

Download cluster GenBank file
NC_091674 - Gene Cluster 52. Type = saccharide-polyketide. Location: 24686976 - 24878218 nt. Click on genes for more information.
Show pHMM detection rules used
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091675 - Cluster 53 - Saccharide

Gene cluster description

Download cluster GenBank file
NC_091675 - Gene Cluster 53. Type = saccharide. Location: 1636951 - 1846060 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091675 - Cluster 54 - Saccharide

Gene cluster description

Download cluster GenBank file
NC_091675 - Gene Cluster 54. Type = saccharide. Location: 4328809 - 4421134 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091675 - Cluster 55 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
NC_091675 - Gene Cluster 55. Type = cyclopeptide. Location: 6597224 - 7083438 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in LOC103400202
Repeat occurs 12 times in a sequence of 663 amino acids
Location between 6961158 and 6988171
Coverage of 16.29 %
Instances:
VNELEQKLQ | VNELEKELQ | VNELEKELQ | VNEAEKKMD | VNELEKELQ
VNEAKKKID | VNELEKELQ | VNEVEKMDD | VNELEKELQ | VNEAEKKID
VNELEKELQ | VNEAEKKMD |
pattern: VNE[LVA][KE][KQ][KEM][LDIM][DQ]
MAPSKLAILSIFLALIFSQIRADNPARLPVRGPGASPSDGPHQKIKPPRDGRHLSVGGLFAKK
GQKKNGQRNGVSPEEREKVIQGLTEEGDQIIQELREEGGKVIQEMLDSIIQEMSGSISSLPTEI
KFLQKNGSLVEQQVRKAHARADELEKKVNELEQKLQSQRKEKEELESRTNEAEEKIDDLLSEIE
NIGKTNDEQETKIRKTEHALEVKVAEVEMWKAKFEATLKAKVLNEVNELEKELQSQRNEKGDLK
DRANEAEKKMDDLLSKLENVNELEKELQSQRNEKRDLKDRVNEAEKKMDDLLSKIENVNELEKE
LQSQHNEKRDLKDRVNEAKKKIDDLLSKIENVNELEKELQMQRNEKGDLKDQVNEVEKMDDLLS
KIENVNELEKELQLQRNEKRDLKDRVNEAEKKIDDLFSKIENVNELEKELQSQRNEKGDLKDRV
NEAEKKMDDLLSKIENALEKKAQAEKWAEPHVETTKTKWIPAIKEQWEVVKDTVEPHVKSLSTK
TFEVYEVSKTTLAPHVIKAQEVVDPYFQEAKKFSKPYVDQVATVAKPHVDKVRVVLKPYTKKAV
IAYEKFLKSATAYHHQVQGTVKDLLKRHELTRPLATKELEWFAASALLALPIIILFRIFSSLFC
TKTKNPVRGTNHTRRKAKRGHPEK
Repeat found in LOC103400202
Repeat occurs 12 times in a sequence of 663 amino acids
Location between 6961158 and 6988171
Coverage of 16.29 %
Instances:
VNELEQKLQ | VNELEKELQ | VNEAEKKID | VNELEKELQ | VNELEKELQ
VNEAKKKID | VNELEKELQ | VNEVEKMDD | VNELEKELQ | VNEAEKKID
VNELEKELQ | VNEAEKKMD |
pattern: VNE[LVA][KE][KQ][KEM][LDIM][DQ]
MAPSKLAILSIFLALIFSQIRADNPARLPVRGPGASPSDGPHQKIKPPRDGRHLSVGGLFAKK
GQKKNGQRNGVSPEEREKVIQGLTEEGDQIIQELREEGGKVIQEMLDSIIQEMSGSISSLPTEI
KFLQKNGSLVEQQVRKAHARADELEKKVNELEQKLQSQRKEKEELESRTNEAEEKIDDLLSEIE
NIGKTNDEQETKIRKTEHALEVKVAEVEMWKAKFEATLKAKVLNEVNELEKELQSQRNEKGDLK
DRVNEAEKKIDDLLSKIENVNELEKELQSQRNEKGDLKDRANEAEKKMDDLLSKLENVNELEKE
LQSQHNEKRDLKDRVNEAKKKIDDLLSKIENVNELEKELQMQRNEKGDLKDQVNEVEKMDDLLS
KIENVNELEKELQLQRNEKRDLKDRVNEAEKKIDDLFSKIENVNELEKELQSQRNEKGDLKDRV
NEAEKKMDDLLSKIENALEKKAQAEKWAEPHVETTKTKWIPAIKEQWEVVKDTVEPHVKSLSTK
TFEVYEVSKTTLAPHVIKAQEVVDPYFQEAKKFSKPYVDQVATVAKPHVDKVRVVLKPYTKKAV
IAYEKFLKSATAYHHQVQGTVKDLLKRHELTRPLATKELEWFAASALLALPIIILFRIFSSLFC
TKTKNPVRGTNHTRRKAKRGHPEK
Repeat found in LOC103400202
Repeat occurs 8 times in a sequence of 588 amino acids
Location between 6961158 and 6988171
Coverage of 17.69 %
Instances:
ELEKKVNELEQKL | ELEQKLQSQRKEK | ELESRTNEAEEKI | ELEKELQSQRNEK | ELEKELQSQRNEK
ELEKELQSQRNEK | ELEKELQSQRNEK | ELEWFAASALLAL |
pattern: ELE[SWKQ][RFKE][ALVT][QNA][SE][LQA][RLE][QENKL][KEA][LKI]
MAPSKLAILSIFLALIFSQIRADNPARLPVRGPGASPSDGPHQKIKPPRDGRHLSVGGLFAKK
GQKKNGQRNGVSPEEREKVIQGLTEEGDQIIQELREEGGKVIQEMLDSIIQEMSGSISSLPTEI
KFLQKNGSLVEQQVRKAHARADELEKKVNELEQKLQSQRKEKEELESRTNEAEEKIDDLLSEIE
NIGKTNDEQETKIRKTEHALEVKVAEVEMWKAKFEATLKAKVLNEVNELEKELQSQRNEKGDLK
DRVNEAEKKIDDLLSKIENVNELEKELQSQRNEKGDLKDRANEAEKKMDDLLSKLENVNELEKE
LQSQRNEKRDLKDRVNEAEKKMDDLLSKIENVNELEKELQSQRNEKGDLKDRVNEAEKKMDDLL
SKIENALEKKAQAEKWAEPHVETTKTKWIPAIKEQWEVVKDTVEPHVKSLSTKTFEVYEVSKTT
LAPHVIKAQEVVDPYFQEAKKFSKPYVDQVATVAKPHVDKVRVVLKPYTKKAVIAYEKFLKSAT
AYHHQVQGTVKDLLKRHELTRPLATKELEWFAASALLALPIIILFRIFSSLFCTKTKNPVRGTN
HTRRKAKRGHPEK
Repeat found in LOC103400202
Repeat occurs 9 times in a sequence of 609 amino acids
Location between 6961158 and 6988171
Coverage of 19.21 %
Instances:
ELEKKVNELEQKL | ELEQKLQSQRKEK | ELESRTNEAEEKI | ELEKELQSQRNEK | ELEKELQSQRNEK
ELEKELQSQRNEK | ELEKELQMQRNEK | ELEKELQSQRNEK | ELEWFAASALLAL |
pattern: ELE[SWKQ][RFKE][ALVT][QNA][SEM][LQA][RLE][QENKL][KEA][LKI]
MAPSKLAILSIFLALIFSQIRADNPARLPVRGPGASPSDGPHQKIKPPRDGRHLSVGGLFAKK
GQKKNGQRNGVSPEEREKVIQGLTEEGDQIIQELREEGGKVIQEMLDSIIQEMSGSISSLPTEI
KFLQKNGSLVEQQVRKAHARADELEKKVNELEQKLQSQRKEKEELESRTNEAEEKIDDLLSEIE
NIGKTNDEQETKIRKTEHALEVKVAEVEMWKAKFEATLKAKVLNEVNELEKELQSQRNEKGDLK
DRVNEAEKKIDDLLSKIENVNELEKELQSQRNEKGDLKDRANEAEKKMDDLLSKLENVNELEKE
LQSQRNEKRDLKDRVNEAEKKMDDLLSKIENVNELEKELQMQRNEKGDLKDQVNELEKELQSQR
NEKGDLKDRVNEAEKKMDDLLSKIENALEKKAQAEKWAEPHVETTKTKWIPAIKEQWEVVKDTV
EPHVKSLSTKTFEVYEVSKTTLAPHVIKAQEVVDPYFQEAKKFSKPYVDQVATVAKPHVDKVRV
VLKPYTKKAVIAYEKFLKSATAYHHQVQGTVKDLLKRHELTRPLATKELEWFAASALLALPIII
LFRIFSSLFCTKTKNPVRGTNHTRRKAKRGHPEK
Repeat found in LOC103400202
Repeat occurs 11 times in a sequence of 647 amino acids
Location between 6961158 and 6988171
Coverage of 15.3 %
Instances:
VNELEQKLQ | VNELEKELQ | VNEAEKKID | VNELEKELQ | VNELEKELQ
VNEAEKKMD | VNELEKELQ | VNELEKELQ | VNEAEKKID | VNELEKELQ
VNEAEKKMD |
pattern: VNE[LA]E[KQ][KE][LIM][DQ]
MAPSKLAILSIFLALIFSQIRADNPARLPVRGPGASPSDGPHQKIKPPRDGRHLSVGGLFAKK
GQKKNGQRNGVSPEEREKVIQGLTEEGDQIIQELREEGGKVIQEMLDSIIQEMSGSISSLPTEI
KFLQKNGSLVEQQVRKAHARADELEKKVNELEQKLQSQRKEKEELESRTNEAEEKIDDLLSEIE
NIGKTNDEQETKIRKTEHALEVKVAEVEMWKAKFEATLKAKVLNEVNELEKELQSQRNEKGDLK
DRVNEAEKKIDDLLSKIENVNELEKELQSQRNEKGDLKDRANEAEKKMDDLLSKLENVNELEKE
LQSQRNEKRDLKDRVNEAEKKMDDLLSKIENVNELEKELQMQRNEKGDLKDQVNELEKELQLQR
NEKRDLKDRVNEAEKKIDDLFSKIENVNELEKELQSQRNEKGDLKDRVNEAEKKMDDLLSKIEN
ALEKKAQAEKWAEPHVETTKTKWIPAIKEQWEVVKDTVEPHVKSLSTKTFEVYEVSKTTLAPHV
IKAQEVVDPYFQEAKKFSKPYVDQVATVAKPHVDKVRVVLKPYTKKAVIAYEKFLKSATAYHHQ
VQGTVKDLLKRHELTRPLATKELEWFAASALLALPIIILFRIFSSLFCTKTKNPVRGTNHTRRK
AKRGHPEK
Repeat found in LOC103400202
Repeat occurs 12 times in a sequence of 663 amino acids
Location between 6961158 and 6988171
Coverage of 16.29 %
Instances:
VNELEQKLQ | VNELEKELQ | VNEAEKKID | VNELEKELQ | VNELEKELQ
VNEAEKKMD | VNELEKELQ | VNEVEKMDD | VNELEKELQ | VNEAEKKID
VNELEKELQ | VNEAEKKMD |
pattern: VNE[LVA]E[KQ][KEM][LDIM][DQ]
MAPSKLAILSIFLALIFSQIRADNPARLPVRGPGASPSDGPHQKIKPPRDGRHLSVGGLFAKK
GQKKNGQRNGVSPEEREKVIQGLTEEGDQIIQELREEGGKVIQEMLDSIIQEMSGSISSLPTEI
KFLQKNGSLVEQQVRKAHARADELEKKVNELEQKLQSQRKEKEELESRTNEAEEKIDDLLSEIE
NIGKTNDEQETKIRKTEHALEVKVAEVEMWKAKFEATLKAKVLNEVNELEKELQSQRNEKGDLK
DRVNEAEKKIDDLLSKIENVNELEKELQSQRNEKGDLKDRANEAEKKMDDLLSKLENVNELEKE
LQSQRNEKRDLKDRVNEAEKKMDDLLSKIENVNELEKELQMQRNEKGDLKDQVNEVEKMDDLLS
KIENVNELEKELQLQRNEKRDLKDRVNEAEKKIDDLFSKIENVNELEKELQSQRNEKGDLKDRV
NEAEKKMDDLLSKIENALEKKAQAEKWAEPHVETTKTKWIPAIKEQWEVVKDTVEPHVKSLSTK
TFEVYEVSKTTLAPHVIKAQEVVDPYFQEAKKFSKPYVDQVATVAKPHVDKVRVVLKPYTKKAV
IAYEKFLKSATAYHHQVQGTVKDLLKRHELTRPLATKELEWFAASALLALPIIILFRIFSSLFC
TKTKNPVRGTNHTRRKAKRGHPEK
Repeat found in LOC103400202
Repeat occurs 11 times in a sequence of 647 amino acids
Location between 6961158 and 6988171
Coverage of 18.7 %
Instances:
VNELEQKLQSQ | VNELEKELQSQ | VNEAEKKIDDL | VNELEKELQSQ | VNELEKELQSQ
VNEAEKKMDDL | VNELEKELQSQ | VNEAKKKIDDL | VNELEKELQMQ | VNELEKELQSQ
VNEAEKKMDDL |
pattern: VNE[LA][KE][KQ][KE][LIM][DQ][SDM][LQ]
MAPSKLAILSIFLALIFSQIRADNPARLPVRGPGASPSDGPHQKIKPPRDGRHLSVGGLFAKK
GQKKNGQRNGVSPEEREKVIQGLTEEGDQIIQELREEGGKVIQEMLDSIIQEMSGSISSLPTEI
KFLQKNGSLVEQQVRKAHARADELEKKVNELEQKLQSQRKEKEELESRTNEAEEKIDDLLSEIE
NIGKTNDEQETKIRKTEHALEVKVAEVEMWKAKFEATLKAKVLNEVNELEKELQSQRNEKGDLK
DRVNEAEKKIDDLLSKIENVNELEKELQSQRNEKGDLKDRANEAEKKMDDLLSKLENVNELEKE
LQSQRNEKRDLKDRVNEAEKKMDDLLSKIENVNELEKELQSQHNEKRDLKDRVNEAKKKIDDLL
SKIENVNELEKELQMQRNEKGDLKDQVNELEKELQSQRNEKGDLKDRVNEAEKKMDDLLSKIEN
ALEKKAQAEKWAEPHVETTKTKWIPAIKEQWEVVKDTVEPHVKSLSTKTFEVYEVSKTTLAPHV
IKAQEVVDPYFQEAKKFSKPYVDQVATVAKPHVDKVRVVLKPYTKKAVIAYEKFLKSATAYHHQ
VQGTVKDLLKRHELTRPLATKELEWFAASALLALPIIILFRIFSSLFCTKTKNPVRGTNHTRRK
AKRGHPEK
Repeat found in LOC103400202
Repeat occurs 13 times in a sequence of 685 amino acids
Location between 6961158 and 6988171
Coverage of 17.08 %
Instances:
VNELEQKLQ | VNELEKELQ | VNEAEKKID | VNELEKELQ | VNELEKELQ
VNEAEKKMD | VNELEKELQ | VNEAKKKID | VNELEKELQ | VNELEKELQ
VNEAEKKID | VNELEKELQ | VNEAEKKMD |
pattern: VNE[LA][KE][KQ][KE][LIM][DQ]
MAPSKLAILSIFLALIFSQIRADNPARLPVRGPGASPSDGPHQKIKPPRDGRHLSVGGLFAKK
GQKKNGQRNGVSPEEREKVIQGLTEEGDQIIQELREEGGKVIQEMLDSIIQEMSGSISSLPTEI
KFLQKNGSLVEQQVRKAHARADELEKKVNELEQKLQSQRKEKEELESRTNEAEEKIDDLLSEIE
NIGKTNDEQETKIRKTEHALEVKVAEVEMWKAKFEATLKAKVLNEVNELEKELQSQRNEKGDLK
DRVNEAEKKIDDLLSKIENVNELEKELQSQRNEKGDLKDRANEAEKKMDDLLSKLENVNELEKE
LQSQRNEKRDLKDRVNEAEKKMDDLLSKIENVNELEKELQSQHNEKRDLKDRVNEAKKKIDDLL
SKIENVNELEKELQMQRNEKGDLKDQVNELEKELQLQRNEKRDLKDRVNEAEKKIDDLFSKIEN
VNELEKELQSQRNEKGDLKDRVNEAEKKMDDLLSKIENALEKKAQAEKWAEPHVETTKTKWIPA
IKEQWEVVKDTVEPHVKSLSTKTFEVYEVSKTTLAPHVIKAQEVVDPYFQEAKKFSKPYVDQVA
TVAKPHVDKVRVVLKPYTKKAVIAYEKFLKSATAYHHQVQGTVKDLLKRHELTRPLATKELEWF
AASALLALPIIILFRIFSSLFCTKTKNPVRGTNHTRRKAKRGHPEK
Repeat found in LOC103400202
Repeat occurs 12 times in a sequence of 663 amino acids
Location between 6961158 and 6988171
Coverage of 16.29 %
Instances:
VNELEQKLQ | VNELEKELQ | VNEAEKKID | VNELEKELQ | VNELEKELQ
VNEAEKKMD | VNELEKELQ | VNEAKKKID | VNELEKELQ | VNEVEKMDD
VNELEKELQ | VNEAEKKMD |
pattern: VNE[LVA][KE][KQ][KEM][LDIM][DQ]
MAPSKLAILSIFLALIFSQIRADNPARLPVRGPGASPSDGPHQKIKPPRDGRHLSVGGLFAKK
GQKKNGQRNGVSPEEREKVIQGLTEEGDQIIQELREEGGKVIQEMLDSIIQEMSGSISSLPTEI
KFLQKNGSLVEQQVRKAHARADELEKKVNELEQKLQSQRKEKEELESRTNEAEEKIDDLLSEIE
NIGKTNDEQETKIRKTEHALEVKVAEVEMWKAKFEATLKAKVLNEVNELEKELQSQRNEKGDLK
DRVNEAEKKIDDLLSKIENVNELEKELQSQRNEKGDLKDRANEAEKKMDDLLSKLENVNELEKE
LQSQRNEKRDLKDRVNEAEKKMDDLLSKIENVNELEKELQSQHNEKRDLKDRVNEAKKKIDDLL
SKIENVNELEKELQMQRNEKGDLKDQVNEVEKMDDLLSKIENVNELEKELQSQRNEKGDLKDRV
NEAEKKMDDLLSKIENALEKKAQAEKWAEPHVETTKTKWIPAIKEQWEVVKDTVEPHVKSLSTK
TFEVYEVSKTTLAPHVIKAQEVVDPYFQEAKKFSKPYVDQVATVAKPHVDKVRVVLKPYTKKAV
IAYEKFLKSATAYHHQVQGTVKDLLKRHELTRPLATKELEWFAASALLALPIIILFRIFSSLFC
TKTKNPVRGTNHTRRKAKRGHPEK
Repeat found in LOC103400202
Repeat occurs 11 times in a sequence of 636 amino acids
Location between 6975777 and 6988171
Coverage of 15.57 %
Instances:
VNELEQKLQ | VNELEKELQ | VNEAEKKID | VNELEKELQ | VNELEKELQ
VNEAKKKID | VNELEKELQ | VNELEKELQ | VNEAEKKID | VNELEKELQ
VNEAEKKMD |
pattern: VNE[LA][KE][KQ][KE][LIM][DQ]
MAPSKLAILSIFLALIFSQIRADNPARLPVRGPGASPSDGPHQKIKPPRDGRHLSVGGLFAKK
GQKKNGQRNGVSPEEREKVIQGLTEEGDQIIQELREEGGKVIQEMLDSIIQEMSGSISSLPTEI
KFLQKNGSLVEQQVRKAHARADELEKKVNELEQKLQSQRKEKEELESRTNEAEEKIDDLLSEIE
NIGKTNDEQETKIRKTEHALEVKVAEVEMWKAKFEATLKAKVLNEVNELEKELQSQRNEKGDLK
DRVNEAEKKIDDLLSKIENVNELEKELQSQRNEKGDLKDRANEAEKKMDDLLSKLENVNELEKE
LQSQHNEKRDLKDRVNEAKKKIDDLLSKIENVNELEKELQMQRNEKGDLKDQVNELEKELQLQR
NEKRDLKDRVNEAEKKIDDLFSKIENVNELEKELQSQRNEKGDLKDRVNEAEKKMDDLLSKIEN
ALEKKAQAEKWAEPHVETTKTKSIPAIKEQWVVVKDTVELHVISLSNKSIEVYEVSKTTLAPHV
IKAQEVVDIYFQEAKKFSKPYVDQLTTVTKPHVDKAVIAYEKFLKPASTYHHQVQGTVKDLLKR
HELTRPLATKELEWFAASALVALLIIIQFRIFSSLFCTKTKKPVPGTNHARRKAKRGHPEK
Repeat found in LOC103400202
Repeat occurs 12 times in a sequence of 652 amino acids
Location between 6975777 and 6988171
Coverage of 16.56 %
Instances:
VNELEQKLQ | VNELEKELQ | VNEAEKKID | VNELEKELQ | VNELEKELQ
VNEAEKKMD | VNELEKELQ | VNEVEKMDD | VNELEKELQ | VNEAEKKID
VNELEKELQ | VNEAEKKMD |
pattern: VNE[LVA]E[KQ][KEM][LDIM][DQ]
MAPSKLAILSIFLALIFSQIRADNPARLPVRGPGASPSDGPHQKIKPPRDGRHLSVGGLFAKK
GQKKNGQRNGVSPEEREKVIQGLTEEGDQIIQELREEGGKVIQEMLDSIIQEMSGSISSLPTEI
KFLQKNGSLVEQQVRKAHARADELEKKVNELEQKLQSQRKEKEELESRTNEAEEKIDDLLSEIE
NIGKTNDEQETKIRKTEHALEVKVAEVEMWKAKFEATLKAKVLNEVNELEKELQSQRNEKGDLK
DRVNEAEKKIDDLLSKIENVNELEKELQSQRNEKGDLKDRANEAEKKMDDLLSKLENVNELEKE
LQSQRNEKRDLKDRVNEAEKKMDDLLSKIENVNELEKELQMQRNEKGDLKDQVNEVEKMDDLLS
KIENVNELEKELQLQRNEKRDLKDRVNEAEKKIDDLFSKIENVNELEKELQSQRNEKGDLKDRV
NEAEKKMDDLLSKIENALEKKAQAEKWAEPHVETTKTKSIPAIKEQWVVVKDTVELHVISLSNK
SIEVYEVSKTTLAPHVIKAQEVVDIYFQEAKKFSKPYVDQLTTVTKPHVDKAVIAYEKFLKPAS
TYHHQVQGTVKDLLKRHELTRPLATKELEWFAASALVALLIIIQFRIFSSLFCTKTKKPVPGTN
HARRKAKRGHPEK

Similar gene clusters

NC_091675 - Cluster 56 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
NC_091675 - Gene Cluster 56. Type = cyclopeptide. Location: 7326905 - 7564559 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Similar gene clusters

NC_091675 - Cluster 57 - Polyketide

Gene cluster description

Download cluster GenBank file
NC_091675 - Gene Cluster 57. Type = polyketide. Location: 8441713 - 8624784 nt. Click on genes for more information.
Show pHMM detection rules used
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091675 - Cluster 58 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
NC_091675 - Gene Cluster 58. Type = cyclopeptide. Location: 17480162 - 17888426 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in LOC103400914
Repeat occurs 4 times in a sequence of 237 amino acids
Location between 17819798 and 17820512
Coverage of 20.25 %
Instances:
SELPRSHQSMSE | SELQAESQSMSE | SELQAESQSMSE | SELQAESRSPSV |
pattern: SEL[QP][RA][SE][SH][RQ]S[PM]S[EV]
MVKQTIGKPSERNDIKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDAPEKAARAFDAALFCL
RGHTAKFNFPDNPPEISGGRSLSAAQIQTEAARFANSELPRSHQSMSEFQAESQSMSELQAESQ
SMSELQAESQSMSELQAESRSPSVSEGSGTVFVESEFLVTPNDSFSDPFSTFGSGNYATEYGLF
AGFDEMNYQFFSPAAAVPTPVVDYYAEENLDGQFFSPAQESFLWNF

Similar gene clusters

Similar known gene clusters

NC_091675 - Cluster 59 - Putative

Gene cluster description

Download cluster GenBank file
NC_091675 - Gene Cluster 59. Type = putative. Location: 21284166 - 21517313 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091676 - Cluster 60 - Cyclopeptide

Gene cluster description

Download cluster GenBank file
NC_091676 - Gene Cluster 60. Type = cyclopeptide. Location: 6163497 - 6489505 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Repeatfinder output

Repeat found in LOC103402999
Repeat occurs 6 times in a sequence of 182 amino acids
Location between 6177441 and 6178816
Coverage of 23.08 %
Instances:
RRRSPSP | RRRRSPS | RRRSPSY | RRRRSPP | RRRSPPR
RRRSVTP |
pattern: RRR[SR][SPV][SPT][SYPR]
MTRVYVGNLDPRVNERDLEDEFRLFGVLRNVWVARRPPGYAFIEFDDRRDALDAVQALDGKNG
WRVELSHNSKGSGGRGGGRGRGGGDDLKCYECGEPGHFARECRMRVGSRGGSGGRRRSPSPRRR
RSPSYDGYGRRSYSPRRRRSPPRRRSVTPPRRGRSYSRSPPYRHARRASPYVNGD
Repeat found in LOC103402999
Repeat occurs 6 times in a sequence of 181 amino acids
Location between 6177441 and 6178657
Coverage of 23.2 %
Instances:
RRRSPSP | RRRRSPS | RRRSPSY | RRRRSPP | RRRSPPR
RRRSVTP |
pattern: RRR[SR][SPV][SPT][SYPR]
MTRVYVGNLDPRVNERDLEDEFRLFGVLRNVWVARRPPGYAFIEFDDRRDALDAVQALDGKNG
WRVELSHNSKGSGGRGGGRGRGGGDDLKCYECGEPGHFARECRMRVGSRGGSGGRRRSPSPRRR
RSPSYDGYGRRSYSPRRRRSPPRRRSVTPPRRGRSYSRSPPYRHARRASPYVNG
Repeat found in LOC103404818
Repeat occurs 7 times in a sequence of 768 amino acids
Location between 6272663 and 6275627
Coverage of 5.47 %
Instances:
EKEREI | EKEQRR | EKEKQR | EKEREK | EKERER
EKEEDI | EKERSR |
pattern: EKE[RKQE][QERDS][RKI]
MIRTPFPPRPLGATGLLQRAPVPGIPGVRPIIPPVRPILPIVTPAEKPQTTVYVGKIAPTVDN
EFMKYLLQLCGPVKSWKRAQDPTDGTPRGFGFCEFESAEGVLRALRLLTKLSIDGQDLVLNVNQ
ATRDYLERVVQKKTENSKKLKEAEAAEKGDGSAPDGEKNVPSNPSVQDPKEEDSNSSNKENDTA
NFGIVTDEDKEADQEAMEKLTSLIEERIKNKPLPPPPTPAPGDATRNSNSTLPAKSRDGDSDVD
TMRNDACEEKIDEEITGDNKTSDQERPETSSPDRSRRQDRSRDRGRDMKREKEREIERYERETE
RERVRKEKEQRRKIEDAEHQYEKCLKDWEYREREKEKQRQYEKEREKERERKRKKEVIYEEDDE
DEDSRKKWRRSALEEKRKRRLREKEEDIADRQKEEEEIAEARKRAEEEKQLEQERDALRVSSGH
VPNGSDTVALAEEFGVELKDKAIEQDVEGYSGPENRIGDGALQNGNSGDKSTMTSASASEPHLS
GSAPAKKLGFGLMGSGKRTAVPSVFKEEDDDAHKDKKMRPLVPIDYSTEELQAVQQTVFGTAPS
NLAAAAEFAKRISNASSKEEKPDAEKERSRRSDDRSSHRDRDRHGDDSNRTRNEHKEKTIDRDT
DREHGMSKPRATDNKKLLDAKQLIDMIPKTKEELFSYEINWAIYEQHALHERMRPWISKKITEF
LGEEETTLVDYIVSSTQEHVGAERMLQLLQSILDEEAEMFVLKMWRMLIFEIKKVETGLASRTR
T
Repeat found in LOC103404818
Repeat occurs 7 times in a sequence of 768 amino acids
Location between 6272663 and 6275627
Coverage of 5.47 %
Instances:
EKEREI | EKEQRR | EKEKQR | EKEREK | EKERER
EKEEDI | EKERSR |
pattern: EKE[RKQE][QERDS][RKI]
MIRTPFPPRPLGATGLLQRAPVPGIPGVRPIIPPVRPILPIVTPAEKPQTTVYVGKIAPTVDN
EFMKYLLQLCGPVKSWKRAQDPTDGTPRGFGFCEFESAEGVLRALRLLTKLSIDGQDLVLNVNQ
ATRDYLERVVQKKTENSKKLKEAEAAEKGDGSAPDGEKNVPSNPSVQDPKEEDSNSSNKENDTA
NFGIVTDEDKEADQEAMEKLTSLIEERIKNKPLPPPPTPAPGDATRNSNSTLPAKSRDGDSDVD
TMRNDACEEKIDEEITGDNKTSDQERPETSSPDRSRRQDRSRDRGRDMKREKEREIERYERETE
RERVRKEKEQRRKIEDAEHQYEKCLKDWEYREREKEKQRQYEKEREKERERKRKKEVIYEEDDE
DEDSRKKWRRSALEEKRKRRLREKEEDIADRQKEEEEIAEARKRAEEEKQLEQERDALRVSSGH
VPNGSDTVALAEEFGVELKDKAIEQDVEGYSGPENRIGDGALQNGNSGDKSTMTSASASEPHLS
GSAPAKKLGFGLMGSGKRTAVPSVFKEEDDDAHKDKKMRPLVPIDYSTEELQAVQQTVFGTAPS
NLAAAAEFAKRISNASSKEEKPDAEKERSRRSDDRSSHRDRDRHGDDSNRTRNEHKEKTIDRDT
DREHGMSKPRATDNKKLLDAKQLIDMIPKTKEELFSYEINWAIYEQHALHERMRPWISKKITEF
LGEEETTLVDYIVSSTQEHVGAERMLQLLQSILDEEAEMFVLKMWRMLIFEIKKVETGLASRTR
T
Repeat found in LOC103404818
Repeat occurs 7 times in a sequence of 768 amino acids
Location between 6272663 and 6275627
Coverage of 5.47 %
Instances:
EKEREI | EKEQRR | EKEKQR | EKEREK | EKERER
EKEEDI | EKERSR |
pattern: EKE[RKQE][QERDS][RKI]
MIRTPFPPRPLGATGLLQRAPVPGIPGVRPIIPPVRPILPIVTPAEKPQTTVYVGKIAPTVDN
EFMKYLLQLCGPVKSWKRAQDPTDGTPRGFGFCEFESAEGVLRALRLLTKLSIDGQDLVLNVNQ
ATRDYLERVVQKKTENSKKLKEAEAAEKGDGSAPDGEKNVPSNPSVQDPKEEDSNSSNKENDTA
NFGIVTDEDKEADQEAMEKLTSLIEERIKNKPLPPPPTPAPGDATRNSNSTLPAKSRDGDSDVD
TMRNDACEEKIDEEITGDNKTSDQERPETSSPDRSRRQDRSRDRGRDMKREKEREIERYERETE
RERVRKEKEQRRKIEDAEHQYEKCLKDWEYREREKEKQRQYEKEREKERERKRKKEVIYEEDDE
DEDSRKKWRRSALEEKRKRRLREKEEDIADRQKEEEEIAEARKRAEEEKQLEQERDALRVSSGH
VPNGSDTVALAEEFGVELKDKAIEQDVEGYSGPENRIGDGALQNGNSGDKSTMTSASASEPHLS
GSAPAKKLGFGLMGSGKRTAVPSVFKEEDDDAHKDKKMRPLVPIDYSTEELQAVQQTVFGTAPS
NLAAAAEFAKRISNASSKEEKPDAEKERSRRSDDRSSHRDRDRHGDDSNRTRNEHKEKTIDRDT
DREHGMSKPRATDNKKLLDAKQLIDMIPKTKEELFSYEINWAIYEQHALHERMRPWISKKITEF
LGEEETTLVDYIVSSTQEHVGAERMLQLLQSILDEEAEMFVLKMWRMLIFEIKKVETGLASRTR
T
Repeat found in LOC103404818
Repeat occurs 7 times in a sequence of 768 amino acids
Location between 6272663 and 6275627
Coverage of 5.47 %
Instances:
EKEREI | EKEQRR | EKEKQR | EKEREK | EKERER
EKEEDI | EKERSR |
pattern: EKE[RKQE][QERDS][RKI]
MIRTPFPPRPLGATGLLQRAPVPGIPGVRPIIPPVRPILPIVTPAEKPQTTVYVGKIAPTVDN
EFMKYLLQLCGPVKSWKRAQDPTDGTPRGFGFCEFESAEGVLRALRLLTKLSIDGQDLVLNVNQ
ATRDYLERVVQKKTENSKKLKEAEAAEKGDGSAPDGEKNVPSNPSVQDPKEEDSNSSNKENDTA
NFGIVTDEDKEADQEAMEKLTSLIEERIKNKPLPPPPTPAPGDATRNSNSTLPAKSRDGDSDVD
TMRNDACEEKIDEEITGDNKTSDQERPETSSPDRSRRQDRSRDRGRDMKREKEREIERYERETE
RERVRKEKEQRRKIEDAEHQYEKCLKDWEYREREKEKQRQYEKEREKERERKRKKEVIYEEDDE
DEDSRKKWRRSALEEKRKRRLREKEEDIADRQKEEEEIAEARKRAEEEKQLEQERDALRVSSGH
VPNGSDTVALAEEFGVELKDKAIEQDVEGYSGPENRIGDGALQNGNSGDKSTMTSASASEPHLS
GSAPAKKLGFGLMGSGKRTAVPSVFKEEDDDAHKDKKMRPLVPIDYSTEELQAVQQTVFGTAPS
NLAAAAEFAKRISNASSKEEKPDAEKERSRRSDDRSSHRDRDRHGDDSNRTRNEHKEKTIDRDT
DREHGMSKPRATDNKKLLDAKQLIDMIPKTKEELFSYEINWAIYEQHALHERMRPWISKKITEF
LGEEETTLVDYIVSSTQEHVGAERMLQLLQSILDEEAEMFVLKMWRMLIFEIKKVETGLASRTR
T
Repeat found in LOC103404818
Repeat occurs 7 times in a sequence of 768 amino acids
Location between 6272663 and 6275627
Coverage of 5.47 %
Instances:
EKEREI | EKEQRR | EKEKQR | EKEREK | EKERER
EKEEDI | EKERSR |
pattern: EKE[RKQE][QERDS][RKI]
MIRTPFPPRPLGATGLLQRAPVPGIPGVRPIIPPVRPILPIVTPAEKPQTTVYVGKIAPTVDN
EFMKYLLQLCGPVKSWKRAQDPTDGTPRGFGFCEFESAEGVLRALRLLTKLSIDGQDLVLNVNQ
ATRDYLERVVQKKTENSKKLKEAEAAEKGDGSAPDGEKNVPSNPSVQDPKEEDSNSSNKENDTA
NFGIVTDEDKEADQEAMEKLTSLIEERIKNKPLPPPPTPAPGDATRNSNSTLPAKSRDGDSDVD
TMRNDACEEKIDEEITGDNKTSDQERPETSSPDRSRRQDRSRDRGRDMKREKEREIERYERETE
RERVRKEKEQRRKIEDAEHQYEKCLKDWEYREREKEKQRQYEKEREKERERKRKKEVIYEEDDE
DEDSRKKWRRSALEEKRKRRLREKEEDIADRQKEEEEIAEARKRAEEEKQLEQERDALRVSSGH
VPNGSDTVALAEEFGVELKDKAIEQDVEGYSGPENRIGDGALQNGNSGDKSTMTSASASEPHLS
GSAPAKKLGFGLMGSGKRTAVPSVFKEEDDDAHKDKKMRPLVPIDYSTEELQAVQQTVFGTAPS
NLAAAAEFAKRISNASSKEEKPDAEKERSRRSDDRSSHRDRDRHGDDSNRTRNEHKEKTIDRDT
DREHGMSKPRATDNKKLLDAKQLIDMIPKTKEELFSYEINWAIYEQHALHERMRPWISKKITEF
LGEEETTLVDYIVSSTQEHVGAERMLQLLQSILDEEAEMFVLKMWRMLIFEIKKVETGLASRTR
T
Repeat found in LOC103403011
Repeat occurs 4 times in a sequence of 636 amino acids
Location between 6325466 and 6327535
Coverage of 6.29 %
Instances:
FTGYSENANA | FTGYGTSANV | FTGYGQSGNG | FTGYGQGAKG |
pattern: FTGY[SG][EQT][SGN][GA][KN][GVA]
MQQHTQLSLVTPLSLFFIFFSSLNVALAANGGSSGAAENPFSPKAYLVRYWSKEVRNDAEKPS
FLLSKASPLNAVDSAAFAKLAAQNGLSTRLPEFCSAANLLCFPDLAPSLEKHDKNANFAVYTDK
NFTNYGTDRLAGVDSFKNYSIGENLPVDSFRRYSRDSVNHKDQFTSYANDGNVVDQSFNSYAGG
STGGAGDFKKYADSVNVPHLGFNSYSDDSNGRSHGFTGYSENANAGDQSFSSYSKNANGAPNEF
TGYGTSANVVGSGFTGYGQSGNGANDKFNNYGNDQNNPTNNFRSYGDGGNAGVETFTSYRDSAN
VGEDSFQSYAKNSNGQKMDFTNYGKSFNVGSDKFTGYGQGAKGQEIGFKIYGANTTFKDYAKKE
TVSFKSYTKAGAGSEKVAATMAAASGSLVKKWVEPGKFFRESMLKKGVVMPMPDIQDKTPKRSF
LPRTILSKLPFATSKIAALKQIFHAADNSTMEKIIVDALQECERAPSAGETKRCVGSAEDMIDF
ATTVLGRNVVVRSTENVNGAKHDVMIGSVKGINGGKVTQSVSCHQSMFPYLLYYCHSVPKVRVY
EADLLDPVSKAKINHGVAICHLDTSAWSPTHGSFMALGSGPGRIEVCHWIFQNDMTWTIAD

Similar gene clusters

NC_091676 - Cluster 61 - Transporter_associated

Gene cluster description

Download cluster GenBank file
NC_091676 - Gene Cluster 61. Type = transporter_associated. Location: 7529164 - 7649318 nt. Click on genes for more information.
Show pHMM detection rules used
plants/transporter_associated: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[MatE/LTP_2/ABC2_membrane/ABC_tran]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091676 - Cluster 62 - Polyketide

Gene cluster description

Download cluster GenBank file
NC_091676 - Gene Cluster 62. Type = polyketide. Location: 12829472 - 12983875 nt. Click on genes for more information.
Show pHMM detection rules used
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091677 - Cluster 63 - Saccharide

Gene cluster description

Download cluster GenBank file
NC_091677 - Gene Cluster 63. Type = saccharide. Location: 8285327 - 8411750 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091677 - Cluster 64 - Saccharide-transporter_associated

Gene cluster description

Download cluster GenBank file
NC_091677 - Gene Cluster 64. Type = saccharide-transporter_associated. Location: 11013443 - 11685514 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))
plants/transporter_associated: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[MatE/LTP_2/ABC2_membrane/ABC_tran]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

Similar known gene clusters

NC_091677 - Cluster 65 - Transporter_associated

Gene cluster description

Download cluster GenBank file
NC_091677 - Gene Cluster 65. Type = transporter_associated. Location: 24202328 - 24620869 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/transporter_associated: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[MatE/LTP_2/ABC2_membrane/ABC_tran]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091677 - Cluster 66 - Terpene

Gene cluster description

Download cluster GenBank file
NC_091677 - Gene Cluster 66. Type = terpene. Location: 29829850 - 29952762 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters

NC_091677 - Cluster 67 - Saccharide

Gene cluster description

Download cluster GenBank file
NC_091677 - Gene Cluster 67. Type = saccharide. Location: 33404994 - 33483320 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

Similar gene clusters