NC_091661.1 - 67 clusters - antiSMASH results

Plant Specialized Metabolite Analysis
Version 2.0

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### Identified secondary metabolite clusters

Cluster | Type | From | To | Size (kb) | Core domains | Product/substrate predicted by subgroup | Most similar known cluster | MIBiG BGC-ID
--- | --- | --- | --- | --- | --- | --- | --- | ---
The following clusters are from record NC_091661.1:
Cluster 1 | Fatty_acid | 25978236 | 26047708 | 69.47 | 2OG-FeII_Oxy, DIOX_N, FA_desaturase | - | - | -
Cluster 2 | Saccharide | 32192627 | 32285535 | 92.91 | 3Beta_HSD, AMP-binding, Acetyltransf_1, Cellulose_synt | - | - | -
The following clusters are from record NC_091662.1:
Cluster 3 | Putative | 4101164 | 4203790 | 102.63 | 2OG-FeII_Oxy, DIOX_N, ECH_2, adh_short | - | - | -
Cluster 4 | Putative | 4309984 | 4582008 | 272.02 | 2OG-FeII_Oxy, DIOX_N, ECH_2 | - | - | -
Cluster 5 | Putative | 5634481 | 5716874 | 82.39 | Aminotran_1_2, Methyltransf_11, Methyltransf_3 | - | - | -
Cluster 6 | Saccharide | 11046303 | 11103118 | 56.81 | Glyco_hydro_1, Methyltransf_11, p450 | - | - | -
The following clusters are from record NC_091663.1:
Cluster 7 | Saccharide | 1422107 | 1561016 | 138.91 | AMP-binding, Amino_oxidase, Glyco_hydro_1, Lipoxygenase | - | - | -
Cluster 8 | Terpene | 6006947 | 6061882 | 54.94 | PRISE, Prenyltransf | - | - | -
Cluster 9 | Fatty_acid | 7005556 | 7171508 | 165.95 | 2OG-FeII_Oxy, DIOX_N, FA_hydroxylase, adh_short_C2 | - | - | -
Cluster 10 | Polyketide | 8688996 | 8858114 | 169.12 | Chal_sti_synt_C, FAE1_CUT1_RppA, p450 | - | - | -
Cluster 11 | Saccharide | 27311726 | 27519809 | 208.08 | Glyco_hydro_1, p450 | - | - | -
Cluster 12 | Saccharide-Terpene | 28886337 | 28978937 | 92.60 | Glyco_hydro_1, Methyltransf_11, Terpene_synth, Terpene_synth_C, p450 | - | - | -
Cluster 13 | Terpene | 34868290 | 34921886 | 53.60 | Acetyltransf_1, Chalcone_2, Terpene_synth, Terpene_synth_C | - | - | -
The following clusters are from record NC_091664.1:
Cluster 14 | Saccharide-Polyketide | 432342 | 663719 | 231.38 | Cellulose_synt, Chal_sti_synt_C, Chal_sti_synt_N, p450 | - | - | -
Cluster 15 | Cyclopeptide | 1742371 | 2101242 | 358.87 | BURP | - | - | -
The following clusters are from record NC_091665.1:
Cluster 16 | Putative | 2182145 | 2373424 | 191.28 | 2OG-FeII_Oxy, DIOX_N, Methyltransf_11, Methyltransf_7 | - | - | -
Cluster 17 | Cyclopeptide | 11924876 | 13011677 | 1086.80 | BURP | - | - | -
Cluster 18 | Cyclopeptide | 12190778 | 13916238 | 1725.46 | BURP | - | - | -
Cluster 19 | Saccharide | 17730759 | 18193645 | 462.89 | UDPGT_2, p450 | flavonoid-6, oleananes-6 | - | -
Cluster 20 | Saccharide | 33255638 | 33303078 | 47.44 | 2OG-FeII_Oxy, DIOX_N, Glycos_transf_1, Methyltransf_3 | - | - | -
Cluster 21 | Alkaloid-Fatty_acid | 38822491 | 39256718 | 434.23 | BBE, FAD_binding_4, FA_hydroxylase, Methyltransf_11 | - | - | -
The following clusters are from record NC_091666.1:
Cluster 22 | Saccharide | 27545054 | 27701285 | 156.23 | AMP-binding, Glyco_hydro_1, UDPGT_2, p450 | small phenolic | - | -
Cluster 23 | Cyclopeptide | 30126437 | 30616424 | 489.99 | BURP | - | - | -
Cluster 24 | Cyclopeptide | 30146825 | 30775531 | 628.71 | BURP | - | - | -
The following clusters are from record NC_091667.1:
Cluster 25 | Saccharide-Fatty_acid | 766822 | 895016 | 128.19 | FA_hydroxylase, Transferase, UDPGT_2 | flavonoid-3, oleananes-3 | - | -
Cluster 26 | Polyketide | 26804929 | 26966585 | 161.66 | Chal_sti_synt_C, Chalcone, FAE1_CUT1_RppA, Methyltransf_11 | - | - | -
Cluster 27 | Saccharide | 28875068 | 29034452 | 159.38 | Dimerisation, Methyltransf_2, UDPGT_2 | cytokinin-7 | - | -
Cluster 28 | Saccharide | 36666784 | 36742600 | 75.82 | 3Beta_HSD, AMP-binding, Acetyltransf_1, Cellulose_synt | - | - | -
The following clusters are from record NC_091668.1:
Cluster 29 | Saccharide | 5833996 | 5930836 | 96.84 | Aminotran_1_2, Glycos_transf_2, SE | - | - | -
Cluster 30 | Cyclopeptide | 10977787 | 11298465 | 320.68 | BURP | - | - | -
Cluster 31 | Saccharide | 13058928 | 13256255 | 197.33 | ABC2_membrane, ABC_tran, Acetyltransf_1, Glyco_hydro_1, Transferase | - | - | -
Cluster 32 | Cyclopeptide | 25685768 | 26273452 | 587.68 | BURP | - | - | -
The following clusters are from record NC_091669.1:
Cluster 33 | Terpene | 1901487 | 2022427 | 120.94 | ADH_N, ADH_zinc_N, Aldo_ket_red, Prenyltrans | - | - | -
Cluster 34 | Saccharide | 10003544 | 10272600 | 269.06 | Epimerase, UDPGT_2 | cyanogenic glucoside-12, monoterpenoid-12, flavonoid | alpha-chaconine/alpha-solanine (9% of genes show similarity) | BGC0002722.2_c1
Cluster 35 | Saccharide | 34063668 | 34127588 | 63.92 | AMP-binding, Amino_oxidase, Glycos_transf_1 | - | - | -
The following clusters are from record NC_091670.1:
Cluster 36 | Fatty_acid | 1788099 | 2032106 | 244.01 | ADH_N, ADH_zinc_N, FA_desaturase_2, Peptidase_S10 | - | - | -
Cluster 37 | Polyketide | 4433183 | 4704135 | 270.95 | Aminotran_1_2, Chal_sti_synt_C, FAE1_CUT1_RppA, adh_short | - | - | -
Cluster 38 | Alkaloid-Fatty_acid | 35766352 | 36002258 | 235.91 | BBE, FAD_binding_4, FA_hydroxylase, Methyltransf_11, adh_short | - | - | -
Cluster 39 | Terpene | 41135034 | 41351339 | 216.31 | Epimerase, Terpene_synth, Terpene_synth_C | - | - | -
The following clusters are from record NC_091671.1:
Cluster 40 | Lignan | 710387 | 865795 | 155.41 | Aminotran_1_2, Dirigent, SQS_PSY | - | - | -
Cluster 41 | Saccharide | 1806257 | 2025762 | 219.50 | AMP-binding, Amino_oxidase, Glyco_hydro_1, Lipoxygenase, UDPGT_2 | - | - | -
Cluster 42 | Terpene | 6133389 | 6188598 | 55.21 | 2OG-FeII_Oxy, DIOX_N, PRISE, Transferase | - | - | -
Cluster 43 | Fatty_acid | 7466806 | 7668105 | 201.30 | 2OG-FeII_Oxy, DIOX_N, FA_hydroxylase, adh_short_C2 | - | - | -
Cluster 44 | Saccharide | 25922236 | 26051569 | 129.33 | Abhydrolase_3, Epimerase, Glycos_transf_1 | - | - | -
Cluster 45 | Putative | 37258654 | 37562031 | 303.38 | 2OG-FeII_Oxy, Chalcone, Transferase, p450, polyprenyl_synt | - | - | -
The following clusters are from record NC_091672.1:
Cluster 46 | Saccharide | 766449 | 830186 | 63.74 | HMGL-like, UDPGT_2, adh_short | flavonoid | - | -
Cluster 47 | Saccharide | 1676902 | 1772746 | 95.84 | ERG4_ERG24, Glycos_transf_2, oMT | - | - | -
The following clusters are from record NC_091673.1:
Cluster 48 | Cyclopeptide | 6025346 | 6294676 | 269.33 | BURP | - | - | -
Cluster 49 | Alkaloid | 6925531 | 7189291 | 263.76 | Aminotran_1_2, Cu_amine_oxid, MatE, p450 | - | - | -
Cluster 50 | Transporter_associated | 7490409 | 7646029 | 155.62 | ABC_tran, Abhydrolase_3, Transferase | - | - | -
Cluster 51 | Fatty_acid | 7940464 | 8028050 | 87.59 | AMP-binding, Lipoxygenase, Transferase | - | - | -
The following clusters are from record NC_091674.1:
Cluster 52 | Saccharide-Polyketide | 24686976 | 24878218 | 191.24 | AMP-binding, Chal_sti_synt_C, Chal_sti_synt_N, Glyco_hydro_1 | - | - | -
The following clusters are from record NC_091675.1:
Cluster 53 | Saccharide | 1636951 | 1846060 | 209.11 | Methyltransf_11, UDPGT_2, p450 | small phenolic | - | -
Cluster 54 | Saccharide | 4328809 | 4421134 | 92.33 | Aminotran_1_2, Glycos_transf_2, SE | - | - | -
Cluster 55 | Cyclopeptide | 6597224 | 7083438 | 486.21 | BURP | - | - | -
Cluster 56 | Cyclopeptide | 7326905 | 7564559 | 237.65 | BURP | - | - | -
Cluster 57 | Polyketide | 8441713 | 8624784 | 183.07 | ABC2_membrane, ABC_tran, Acetyltransf_1, Chal_sti_synt_C, FAE1_CUT1_RppA, p450 | - | - | -
Cluster 58 | Cyclopeptide | 17480162 | 17888426 | 408.26 | BURP | - | alpha-chaconine/alpha-solanine (9% of genes show similarity) | BGC0002722.2_c1
Cluster 59 | Putative | 21284166 | 21517313 | 233.15 | Methyltransf_7, p450 | - | - | -
The following clusters are from record NC_091676.1:
Cluster 60 | Cyclopeptide | 6163497 | 6489505 | 326.01 | BURP | - | - | -
Cluster 61 | Transporter_associated | 7529164 | 7649318 | 120.15 | ABC_tran, Transferase | - | - | -
Cluster 62 | Polyketide | 12829472 | 12983875 | 154.40 | Chal_sti_synt_C, ECH_2, Epimerase, FAE1_CUT1_RppA, MatE | - | - | -
The following clusters are from record NC_091677.1:
Cluster 63 | Saccharide | 8285327 | 8411750 | 126.42 | Cellulose_synt, UDPGT_2, p450 | flavonoid-2, oleananes-2 | - | -
Cluster 64 | Saccharide-Transporter_associated | 11013443 | 11685514 | 672.07 | Aminotran_3, Epimerase, LTP_2, UDPGT_2, p450 | cyanogenic glucoside-10, monoterpenoid-10, flavonoid | alpha-chaconine/alpha-solanine (27% of genes show similarity) | BGC0002722.2_c1
Cluster 65 | Transporter_associated | 24202328 | 24620869 | 418.54 | 2OG-FeII_Oxy, ABC2_membrane, ABC_tran, Aminotran_1_2, DIOX_N | - | - | -
Cluster 66 | Terpene | 29829850 | 29952762 | 122.91 | His_biosynth, SQHop_cyclase_C, SQHop_cyclase_N, Trp_syntA | beta-amyrin-2, triterpene-2, Cycloartenol | - | -
Cluster 67 | Saccharide | 33404994 | 33483320 | 78.33 | AMP-binding, Amino_oxidase, Glycos_transf_1 | - | - | -

### NC_091661 - Cluster 1 - Fatty_acid

### Gene cluster description

Download cluster GenBank file
NC_091661 - Gene Cluster 1. Type = fatty_acid. Location: 25978236 - 26047708 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091661 - Cluster 2 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_091661 - Gene Cluster 2. Type = saccharide. Location: 32192627 - 32285535 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091662 - Cluster 3 - Putative

### Gene cluster description

Download cluster GenBank file
NC_091662 - Gene Cluster 3. Type = putative. Location: 4101164 - 4203790 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091662 - Cluster 4 - Putative

### Gene cluster description

Download cluster GenBank file
NC_091662 - Gene Cluster 4. Type = putative. Location: 4309984 - 4582008 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091662 - Cluster 5 - Putative

### Gene cluster description

Download cluster GenBank file
NC_091662 - Gene Cluster 5. Type = putative. Location: 5634481 - 5716874 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091662 - Cluster 6 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_091662 - Gene Cluster 6. Type = saccharide. Location: 11046303 - 11103118 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091663 - Cluster 7 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_091663 - Gene Cluster 7. Type = saccharide. Location: 1422107 - 1561016 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091663 - Cluster 8 - Terpene

### Gene cluster description

Download cluster GenBank file
NC_091663 - Gene Cluster 8. Type = terpene. Location: 6006947 - 6061882 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091663 - Cluster 9 - Fatty_acid

### Gene cluster description

Download cluster GenBank file
NC_091663 - Gene Cluster 9. Type = fatty_acid. Location: 7005556 - 7171508 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091663 - Cluster 10 - Polyketide

### Gene cluster description

Download cluster GenBank file
NC_091663 - Gene Cluster 10. Type = polyketide. Location: 8688996 - 8858114 nt. Click on genes for more information.
Show pHMM detection rules used
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091663 - Cluster 11 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_091663 - Gene Cluster 11. Type = saccharide. Location: 27311726 - 27519809 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091663 - Cluster 12 - Saccharide-terpene

### Gene cluster description

Download cluster GenBank file
NC_091663 - Gene Cluster 12. Type = saccharide-terpene. Location: 28886337 - 28978937 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091663 - Cluster 13 - Terpene

### Gene cluster description

Download cluster GenBank file
NC_091663 - Gene Cluster 13. Type = terpene. Location: 34868290 - 34921886 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091664 - Cluster 14 - Saccharide-polyketide

### Gene cluster description

Download cluster GenBank file
NC_091664 - Gene Cluster 14. Type = saccharide-polyketide. Location: 432342 - 663719 nt. Click on genes for more information.
Show pHMM detection rules used
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091664 - Cluster 15 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_091664 - Gene Cluster 15. Type = cyclopeptide. Location: 1742371 - 2101242 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

No repeats detected in this cluster.

### Similar gene clusters

### NC_091665 - Cluster 16 - Putative

### Gene cluster description

Download cluster GenBank file
NC_091665 - Gene Cluster 16. Type = putative. Location: 2182145 - 2373424 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091665 - Cluster 17 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_091665 - Gene Cluster 17. Type = cyclopeptide. Location: 11924876 - 13011677 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC103415379
Repeat occurs 6 times in a sequence of 373 amino acids
Location between 12467715 and 12468837
Coverage of 12.87 %
Instances:
KEVETPYV | KEVETPYV | KEVDAPYI | KEVEAPYI | KEVEAPYI
KEVLASKM |
pattern: KEV[DEL][AT][SP][YK][IVM]
MSYEKNESPNYITNHGTKEAHESKEVETPYVMGYGTKKGGKEVETPYVMSYEKNQRPNYITNY
GAKEAHESKEVDAPYILGYISARDTKEPKEVEAPYITGYISAQGTKVPKEVEAPYITAYISTHS
AKEKVGTKCKHHKHVNPPSFDTKHSQEPTSKGHEHHHMHTHSSSPMDHNEASWQGFFTFDDLHK
GMIMPLNFPNQEHSPFLPKDVADSIPFSTPQLPQLLQLLSIPQGSRDANNMAYALEQCEMKPIN
GETKLCATSLESMTDFVTKIIGAGVRFNILSTTHPITSTSITQNYILKEPKEVLASKMVFCHPL
AYPYAVFFCHHFEKDTKFFKVRLRGENGDKVEAMAVCPMDTSDWVPNHNIFGPL

### Similar gene clusters

### NC_091665 - Cluster 18 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_091665 - Gene Cluster 18. Type = cyclopeptide. Location: 12190778 - 13916238 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC103415379
Repeat occurs 6 times in a sequence of 373 amino acids
Location between 12467715 and 12468837
Coverage of 12.87 %
Instances:
KEVETPYV | KEVETPYV | KEVDAPYI | KEVEAPYI | KEVEAPYI
KEVLASKM |
pattern: KEV[DEL][AT][SP][YK][IVM]
MSYEKNESPNYITNHGTKEAHESKEVETPYVMGYGTKKGGKEVETPYVMSYEKNQRPNYITNY
GAKEAHESKEVDAPYILGYISARDTKEPKEVEAPYITGYISAQGTKVPKEVEAPYITAYISTHS
AKEKVGTKCKHHKHVNPPSFDTKHSQEPTSKGHEHHHMHTHSSSPMDHNEASWQGFFTFDDLHK
GMIMPLNFPNQEHSPFLPKDVADSIPFSTPQLPQLLQLLSIPQGSRDANNMAYALEQCEMKPIN
GETKLCATSLESMTDFVTKIIGAGVRFNILSTTHPITSTSITQNYILKEPKEVLASKMVFCHPL
AYPYAVFFCHHFEKDTKFFKVRLRGENGDKVEAMAVCPMDTSDWVPNHNIFGPL

Repeat found in LOC103424982
Repeat occurs 8 times in a sequence of 493 amino acids
Location between 13080264 and 13083123
Coverage of 16.23 %
Instances:
ATKSMKEVED | ATKSMKEVED | ATKSMKEVED | ATKSMKEVED | ATKSMKEVED
ATKEEVETPY | ATKEEVQTPY | ATKESKKEVK |
pattern: ATK[SE][SEM][KV][KEQ][EVT][EPV][YDK]
MASRFIIFCLLFVLQCRYATGARDVVKQQYKIGYGATKSMKEVEDSPNYITNCGNKQGRKGIG
ATKSMKEVEDLPNYITNYGNKQGIIGNGATKSMKEVEDLPNYITNYGNKQGIIGNGATKSMKEV
EDLPNYITNYGNKQGRKGIGATKSMKEVEDIPNYITNYGGRKGAMTPYTMSYATKEEVETPYTM
SYATKEEVQTPYTMNYATKESKKEVKTPYTMSYAAKEEVETPYKMSYGTEEVEPSHEHVHIHMH
PQSQPHMDHNEASKQGFFTFDDLHCGMRMPLHFPNQEHSRFLPKEVADSIPFSTPHIPQIRQLF
SIPQGSQEAKNVAYALEQCEMKPITGETKFCATSLESMTNFVTKIIGSGVRFNILSTEHPTTST
SITQRYTILEEPKQVLASKMVFCHPLAYPYAVFFCHHFERDTKFFKVKLGGENGDKVQAVAVCH
MDTSDWDPAHDLFALLGIKASASSPVCHFLPENHLVWIPSPATSAI

Repeat found in LOC103424982
Repeat occurs 7 times in a sequence of 465 amino acids
Location between 13080264 and 13083123
Coverage of 10.54 %
Instances:
ATKSMKE | ATKSMKE | ATKSMKE | ATKSMKE | ATKEEVE
ATKEEVQ | ATKESKK |
pattern: ATK[SE][SEM][KV][KEQ]
MASRFIIFCLLFVLQCRYATGARDVVKQQYKIGYGATKSMKEVEDSPNYITNCGNKQGRKGIG
ATKSMKEVEDLPNYITNYGNKQGIIGNGATKSMKEVEDLPNYITNYGNKQGIIGNGATKSMKEV
EDIPNYITNYGGRKGAMTPYTMSYATKEEVETPYTMSYATKEEVQTPYTMNYATKESKKEVKTP
YTMSYAAKEEVETPYKMSYGTEEVEPSHEHVHIHMHPQSQPHMDHNEASKQGFFTFDDLHCGMR
MPLHFPNQEHSRFLPKEVADSIPFSTPHIPQIRQLFSIPQGSQEAKNVAYALEQCEMKPITGET
KFCATSLESMTNFVTKIIGSGVRFNILSTEHPTTSTSITQRYTILEEPKQVLASKMVFCHPLAY
PYAVFFCHHFERDTKFFKVKLGGENGDKVQAVAVCHMDTSDWDPAHDLFALLGIKASASSPVCH
FLPENHLVWIPSPATSAI

Repeat found in LOC103424982
Repeat occurs 7 times in a sequence of 465 amino acids
Location between 13080264 and 13083123
Coverage of 10.54 %
Instances:
ATKSMKE | ATKSMKE | ATKSMKE | ATKSMKE | ATKEEVE
ATKEEVQ | ATKESKK |
pattern: ATK[SE][SEM][KV][KEQ]
MASRFIIFCLLFVLQCRYATGARDVVKQQYKIGYGATKSMKEVEDSPNYITNCGNKQGRKGIG
ATKSMKEVEDLPNYITNYGNKQGIIGNGATKSMKEVEDLPNYITNYGNKQGRKGIGATKSMKEV
EDIPNYITNYGGRKGAMTPYTMSYATKEEVETPYTMSYATKEEVQTPYTMNYATKESKKEVKTP
YTMSYAAKEEVETPYKMSYGTEEVEPSHEHVHIHMHPQSQPHMDHNEASKQGFFTFDDLHCGMR
MPLHFPNQEHSRFLPKEVADSIPFSTPHIPQIRQLFSIPQGSQEAKNVAYALEQCEMKPITGET
KFCATSLESMTNFVTKIIGSGVRFNILSTEHPTTSTSITQRYTILEEPKQVLASKMVFCHPLAY
PYAVFFCHHFERDTKFFKVKLGGENGDKVQAVAVCHMDTSDWDPAHDLFALLGIKASASSPVCH
FLPENHLVWIPSPATSAI

Repeat found in LOC103424982
Repeat occurs 7 times in a sequence of 465 amino acids
Location between 13080264 and 13083123
Coverage of 10.54 %
Instances:
ATKSMKE | ATKSMKE | ATKSMKE | ATKSMKE | ATKEEVE
ATKEEVQ | ATKESKK |
pattern: ATK[SE][SEM][KV][KEQ]
MASRFIIFCLLFVLQCRYATGARDVVKQQYKIGYGATKSMKEVEDLPNYITNYGNKQGIIGNG
ATKSMKEVEDLPNYITNYGNKQGIIGNGATKSMKEVEDLPNYITNYGNKQGRKGIGATKSMKEV
EDIPNYITNYGGRKGAMTPYTMSYATKEEVETPYTMSYATKEEVQTPYTMNYATKESKKEVKTP
YTMSYAAKEEVETPYKMSYGTEEVEPSHEHVHIHMHPQSQPHMDHNEASKQGFFTFDDLHCGMR
MPLHFPNQEHSRFLPKEVADSIPFSTPHIPQIRQLFSIPQGSQEAKNVAYALEQCEMKPITGET
KFCATSLESMTNFVTKIIGSGVRFNILSTEHPTTSTSITQRYTILEEPKQVLASKMVFCHPLAY
PYAVFFCHHFERDTKFFKVKLGGENGDKVQAVAVCHMDTSDWDPAHDLFALLGIKASASSPVCH
FLPENHLVWIPSPATSAI

Repeat found in LOC103424982
Repeat occurs 8 times in a sequence of 492 amino acids
Location between 13080264 and 13083123
Coverage of 16.26 %
Instances:
ATKSMKEVED | ATKSMKEVED | ATKSMKEVED | ATKSMKEVED | ATKSMKEVED
ATKEEVETPY | ATKEEVQTPY | ATKESKKEVK |
pattern: ATK[SE][SEM][KV][KEQ][EVT][EPV][YDK]
MASRFIIFCLLFVLCRYATGARDVVKQQYKIGYGATKSMKEVEDSPNYITNCGNKQGRKGIGA
TKSMKEVEDLPNYITNYGNKQGIIGNGATKSMKEVEDLPNYITNYGNKQGIIGNGATKSMKEVE
DLPNYITNYGNKQGRKGIGATKSMKEVEDIPNYITNYGGRKGAMTPYTMSYATKEEVETPYTMS
YATKEEVQTPYTMNYATKESKKEVKTPYTMSYAAKEEVETPYKMSYGTEEVEPSHEHVHIHMHP
QSQPHMDHNEASKQGFFTFDDLHCGMRMPLHFPNQEHSRFLPKEVADSIPFSTPHIPQIRQLFS
IPQGSQEAKNVAYALEQCEMKPITGETKFCATSLESMTNFVTKIIGSGVRFNILSTEHPTTSTS
ITQRYTILEEPKQVLASKMVFCHPLAYPYAVFFCHHFERDTKFFKVKLGGENGDKVQAVAVCHM
DTSDWDPAHDLFALLGIKASASSPVCHFLPENHLVWIPSPATSAI

Repeat found in LOC103424982
Repeat occurs 7 times in a sequence of 464 amino acids
Location between 13080264 and 13083123
Coverage of 10.56 %
Instances:
ATKSMKE | ATKSMKE | ATKSMKE | ATKSMKE | ATKEEVE
ATKEEVQ | ATKESKK |
pattern: ATK[SE][SEM][KV][KEQ]
MASRFIIFCLLFVLCRYATGARDVVKQQYKIGYGATKSMKEVEDLPNYITNYGNKQGIIGNGA
TKSMKEVEDLPNYITNYGNKQGIIGNGATKSMKEVEDLPNYITNYGNKQGRKGIGATKSMKEVE
DIPNYITNYGGRKGAMTPYTMSYATKEEVETPYTMSYATKEEVQTPYTMNYATKESKKEVKTPY
TMSYAAKEEVETPYKMSYGTEEVEPSHEHVHIHMHPQSQPHMDHNEASKQGFFTFDDLHCGMRM
PLHFPNQEHSRFLPKEVADSIPFSTPHIPQIRQLFSIPQGSQEAKNVAYALEQCEMKPITGETK
FCATSLESMTNFVTKIIGSGVRFNILSTEHPTTSTSITQRYTILEEPKQVLASKMVFCHPLAYP
YAVFFCHHFERDTKFFKVKLGGENGDKVQAVAVCHMDTSDWDPAHDLFALLGIKASASSPVCHF
LPENHLVWIPSPATSAI

### Similar gene clusters

### NC_091665 - Cluster 19 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_091665 - Gene Cluster 19. Type = saccharide. Location: 17730759 - 18193645 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091665 - Cluster 20 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_091665 - Gene Cluster 20. Type = saccharide. Location: 33255638 - 33303078 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091665 - Cluster 21 - Alkaloid-fatty_acid

### Gene cluster description

Download cluster GenBank file
NC_091665 - Gene Cluster 21. Type = alkaloid-fatty_acid. Location: 38822491 - 39256718 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091666 - Cluster 22 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_091666 - Gene Cluster 22. Type = saccharide. Location: 27545054 - 27701285 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091666 - Cluster 23 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_091666 - Gene Cluster 23. Type = cyclopeptide. Location: 30126437 - 30616424 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC103437716
Repeat occurs 3 times in a sequence of 363 amino acids
Location between 30230705 and 30232678
Coverage of 5.79 %
Instances:
SGNSSED | SGNSSED | SGNQSRP |
pattern: SGN[SQ]S[RE][DP]
MEYRNDYPNLSSGNSSEDERSDQFSDSGNSSEDDSASETVHSSISDSESVADSGSSSSGNQSR
PFGDGLVPLFDGDRVHDLIKQRFLSSLGLLGAQASVVAVHRNSYSSLVGQARLRSFQIYLKAVE
EKCGGNPNVKYAWFAPSSKDEISKIICHGFGNFEQPQTNGAFGNGVYLAPDDSPLQLVESLNVD
EDGLRHLLLCRVILGRPEVVCPGSKQHHPSSEQFDSGIDSIFAPKKYIVWSTHMNTHILPEYVI
SFRAPNCLKELLKVQEPVKKPTSPWMPFPALIGVLSKFLPPPSIALISKHYKDHRENVITRQQL
IQKVRQIAGDKLLASIIKSFRAKQIKTMQTKAMPPAEAGVRWTV

Repeat found in LOC103428291
Repeat occurs 4 times in a sequence of 848 amino acids
Location between 30288455 and 30291002
Coverage of 3.77 %
Instances:
EIHGHVLK | EIHGFVVK | EIHGLVVK | EIHSYLLR |
pattern: EIH[GS][YLFH][LV][LV][RK]
MAFVVPQGWYSIHYPAIQSEAASHYKFRRLSTPCFLSFTSKFHNFCSGIQFLKAPSRKLILGR
GFSRESSLLEVSSAGQLIKDYVEDGNFEDAITIYVKVLEFGLPVSEFRFFPCLIKAFGGLCDAG
KVREIHGHVLKLGVLDDVYDVNSLLGVYWKCWAVEDAIQLFEKMRERDLVSWNTMISGLCHWGD
YMGSLRMFSRMVNDYWVLPNRVACLSALSSCSSVQCSVHGREIHGFVVKREIATDQFLVSGLID
MYMKCGDVKNAEYVFGSIVYEESIRGNPVIWNVMISGYVANGRLPQAVELFLEMLEIGLSPDTS
TMVAVIGLCSQLLDLALGRQIHKFCYSIQLNHDARVETALMDMYFKCGDSKAGLEIFQRSQNRN
IVMWGAVISNFAQSSRPHEALNLFHNHALEYGFVDSAIVLAVLRACSSLAVRPRGMEIHGLVVK
MGFDSDVFVGGALVDMYAKCRDMESAQIVFYRLPARDLVSWNALISGYTRNEFPDEALKAFLDM
QSDGVKPNAVTVASMLSVCAQLSVMKSCKEIHSYLLRQEFESNVLVSNSLITTYAKCGDMKSSW
AIFESMPERTEVSWNSILLGLGMHGHADETFGLFEKMEAAGMKPDHATFTALLSACSHAGRVEE
GLKYFKRMVEDFTIEPRLEQYTCMVDLLGRAGHLKHAYDIILAMPCTPDDRVWGSLLGSCKIHG
DERLAEVVSDHIFELDPTSIGYRTLLANLYEEYGKWNDVTRIRSDIKGRGLKKTPGCSWIEVDS
NVHVFMAGDQSHKQLEEIYATVECLTNEIRKAGYIPQSPTVSVRHDEVNHENLSSFKDDDLLFP
VASRNHSRTGSAELMIG

Repeat found in LOC103428291
Repeat occurs 4 times in a sequence of 848 amino acids
Location between 30288455 and 30291002
Coverage of 3.77 %
Instances:
EIHGHVLK | EIHGFVVK | EIHGLVVK | EIHSYLLR |
pattern: EIH[GS][YLFH][LV][LV][RK]
MAFVVPQGWYSIHYPAIQSEAASHYKFRRLSTPCFLSFTSKFHNFCSGIQFLKAPSRKLILGR
GFSRESSLLEVSSAGQLIKDYVEDGNFEDAITIYVKVLEFGLPVSEFRFFPCLIKAFGGLCDAG
KVREIHGHVLKLGVLDDVYDVNSLLGVYWKCWAVEDAIQLFEKMRERDLVSWNTMISGLCHWGD
YMGSLRMFSRMVNDYWVLPNRVACLSALSSCSSVQCSVHGREIHGFVVKREIATDQFLVSGLID
MYMKCGDVKNAEYVFGSIVYEESIRGNPVIWNVMISGYVANGRLPQAVELFLEMLEIGLSPDTS
TMVAVIGLCSQLLDLALGRQIHKFCYSIQLNHDARVETALMDMYFKCGDSKAGLEIFQRSQNRN
IVMWGAVISNFAQSSRPHEALNLFHNHALEYGFVDSAIVLAVLRACSSLAVRPRGMEIHGLVVK
MGFDSDVFVGGALVDMYAKCRDMESAQIVFYRLPARDLVSWNALISGYTRNEFPDEALKAFLDM
QSDGVKPNAVTVASMLSVCAQLSVMKSCKEIHSYLLRQEFESNVLVSNSLITTYAKCGDMKSSW
AIFESMPERTEVSWNSILLGLGMHGHADETFGLFEKMEAAGMKPDHATFTALLSACSHAGRVEE
GLKYFKRMVEDFTIEPRLEQYTCMVDLLGRAGHLKHAYDIILAMPCTPDDRVWGSLLGSCKIHG
DERLAEVVSDHIFELDPTSIGYRTLLANLYEEYGKWNDVTRIRSDIKGRGLKKTPGCSWIEVDS
NVHVFMAGDQSHKQLEEIYATVECLTNEIRKAGYIPQSPTVSVRHDEVNHENLSSFKDDDLLFP
VASRNHSRTGSAELMIG

Repeat found in LOC103428291
Repeat occurs 4 times in a sequence of 848 amino acids
Location between 30288455 and 30291002
Coverage of 3.77 %
Instances:
EIHGHVLK | EIHGFVVK | EIHGLVVK | EIHSYLLR |
pattern: EIH[GS][YLFH][LV][LV][RK]
MAFVVPQGWYSIHYPAIQSEAASHYKFRRLSTPCFLSFTSKFHNFCSGIQFLKAPSRKLILGR
GFSRESSLLEVSSAGQLIKDYVEDGNFEDAITIYVKVLEFGLPVSEFRFFPCLIKAFGGLCDAG
KVREIHGHVLKLGVLDDVYDVNSLLGVYWKCWAVEDAIQLFEKMRERDLVSWNTMISGLCHWGD
YMGSLRMFSRMVNDYWVLPNRVACLSALSSCSSVQCSVHGREIHGFVVKREIATDQFLVSGLID
MYMKCGDVKNAEYVFGSIVYEESIRGNPVIWNVMISGYVANGRLPQAVELFLEMLEIGLSPDTS
TMVAVIGLCSQLLDLALGRQIHKFCYSIQLNHDARVETALMDMYFKCGDSKAGLEIFQRSQNRN
IVMWGAVISNFAQSSRPHEALNLFHNHALEYGFVDSAIVLAVLRACSSLAVRPRGMEIHGLVVK
MGFDSDVFVGGALVDMYAKCRDMESAQIVFYRLPARDLVSWNALISGYTRNEFPDEALKAFLDM
QSDGVKPNAVTVASMLSVCAQLSVMKSCKEIHSYLLRQEFESNVLVSNSLITTYAKCGDMKSSW
AIFESMPERTEVSWNSILLGLGMHGHADETFGLFEKMEAAGMKPDHATFTALLSACSHAGRVEE
GLKYFKRMVEDFTIEPRLEQYTCMVDLLGRAGHLKHAYDIILAMPCTPDDRVWGSLLGSCKIHG
DERLAEVVSDHIFELDPTSIGYRTLLANLYEEYGKWNDVTRIRSDIKGRGLKKTPGCSWIEVDS
NVHVFMAGDQSHKQLEEIYATVECLTNEIRKAGYIPQSPTVSVRHDEVNHENLSSFKDDDLLFP
VASRNHSRTGSAELMIG

Repeat found in LOC103428291
Repeat occurs 4 times in a sequence of 848 amino acids
Location between 30288455 and 30291002
Coverage of 3.77 %
Instances:
EIHGHVLK | EIHGFVVK | EIHGLVVK | EIHSYLLR |
pattern: EIH[GS][YLFH][LV][LV][RK]
MAFVVPQGWYSIHYPAIQSEAASHYKFRRLSTPCFLSFTSKFHNFCSGIQFLKAPSRKLILGR
GFSRESSLLEVSSAGQLIKDYVEDGNFEDAITIYVKVLEFGLPVSEFRFFPCLIKAFGGLCDAG
KVREIHGHVLKLGVLDDVYDVNSLLGVYWKCWAVEDAIQLFEKMRERDLVSWNTMISGLCHWGD
YMGSLRMFSRMVNDYWVLPNRVACLSALSSCSSVQCSVHGREIHGFVVKREIATDQFLVSGLID
MYMKCGDVKNAEYVFGSIVYEESIRGNPVIWNVMISGYVANGRLPQAVELFLEMLEIGLSPDTS
TMVAVIGLCSQLLDLALGRQIHKFCYSIQLNHDARVETALMDMYFKCGDSKAGLEIFQRSQNRN
IVMWGAVISNFAQSSRPHEALNLFHNHALEYGFVDSAIVLAVLRACSSLAVRPRGMEIHGLVVK
MGFDSDVFVGGALVDMYAKCRDMESAQIVFYRLPARDLVSWNALISGYTRNEFPDEALKAFLDM
QSDGVKPNAVTVASMLSVCAQLSVMKSCKEIHSYLLRQEFESNVLVSNSLITTYAKCGDMKSSW
AIFESMPERTEVSWNSILLGLGMHGHADETFGLFEKMEAAGMKPDHATFTALLSACSHAGRVEE
GLKYFKRMVEDFTIEPRLEQYTCMVDLLGRAGHLKHAYDIILAMPCTPDDRVWGSLLGSCKIHG
DERLAEVVSDHIFELDPTSIGYRTLLANLYEEYGKWNDVTRIRSDIKGRGLKKTPGCSWIEVDS
NVHVFMAGDQSHKQLEEIYATVECLTNEIRKAGYIPQSPTVSVRHDEVNHENLSSFKDDDLLFP
VASRNHSRTGSAELMIG

Repeat found in LOC103437722
Repeat occurs 3 times in a sequence of 656 amino acids
Location between 30310343 and 30312314
Coverage of 3.66 %
Instances:
EIHGFVVK | EIHGLVVK | EIHSYLLR |
pattern: EIH[GS][YLF][LV][LV][RK]
MGSLRMFSRMVNDYWVLPNWVACLSALSSCSSVQCSVHGREIHGFVVKREIATDQFLVSGLID
MYMKCGDVKNAEYVFGSIVYEESIRGNPVIWNVMISGYVANGRLPQAVELFLEMLEIGLSPDTS
TMVAVIGLCSQLLDLALGRQIHKFCYSIQLNHDARVETALMDMYFKCGDSKAGLEIFQRSQNRN
IVMWGAVISNFAQSSRPHEALNLFHNHALEYGFVDSAIVLAVLRACSSLAVRPRGMEIHGLVVK
MGFDSDVFVGGALVDMYAKCRDMESAQIVFYRLPARDLVSWNALISGYTRNEFPDEALKAFLDM
QSDGVKPNAVTVASMLSVCAQLSVMKSCKEIHSYLLRQEFESNVLVSNSLITTYAKCGDMKSSW
AIFVSMPERTEVSWNSILLGLGMHGHADETFGLFEKMEAAGMKPDHATFTALLSACSHAGRVEE
GLKYFKRMVEDFTIEPRLEQYTCMVDLLGRAGHLKHAYDIILAMPCTPDDRVWGSLLGSCKIHG
DERLAEVVSDHIFELDPTSIGYRTLLANLYEEYGKWNDVTRIRSDIKGRGLKKTPGCSWIEVDS
NVHVFMAGDQSHKQLEEIYATVECLTNEIRKAGYIPQSPTVSVRHDEVNHENLSSFKDDDLLFP
VASRNHSRTGSAELMIG

Repeat found in LOC103437722
Repeat occurs 3 times in a sequence of 656 amino acids
Location between 30310343 and 30312314
Coverage of 3.66 %
Instances:
EIHGFVVK | EIHGLVVK | EIHSYLLR |
pattern: EIH[GS][YLF][LV][LV][RK]
MGSLRMFSRMVNDYWVLPNWVACLSALSSCSSVQCSVHGREIHGFVVKREIATDQFLVSGLID
MYMKCGDVKNAEYVFGSIVYEESIRGNPVIWNVMISGYVANGRLPQAVELFLEMLEIGLSPDTS
TMVAVIGLCSQLLDLALGRQIHKFCYSIQLNHDARVETALMDMYFKCGDSKAGLEIFQRSQNRN
IVMWGAVISNFAQSSRPHEALNLFHNHALEYGFVDSAIVLAVLRACSSLAVRPRGMEIHGLVVK
MGFDSDVFVGGALVDMYAKCRDMESAQIVFYRLPARDLVSWNALISGYTRNEFPDEALKAFLDM
QSDGVKPNAVTVASMLSVCAQLSVMKSCKEIHSYLLRQEFESNVLVSNSLITTYAKCGDMKSSW
AIFVSMPERTEVSWNSILLGLGMHGHADETFGLFEKMEAAGMKPDHATFTALLSACSHAGRVEE
GLKYFKRMVEDFTIEPRLEQYTCMVDLLGRAGHLKHAYDIILAMPCTPDDRVWGSLLGSCKIHG
DERLAEVVSDHIFELDPTSIGYRTLLANLYEEYGKWNDVTRIRSDIKGRGLKKTPGCSWIEVDS
NVHVFMAGDQSHKQLEEIYATVECLTNEIRKAGYIPQSPTVSVRHDEVNHENLSSFKDDDLLFP
VASRNHSRTGSAELMIG

Repeat found in LOC103437722
Repeat occurs 3 times in a sequence of 656 amino acids
Location between 30310343 and 30312314
Coverage of 3.66 %
Instances:
EIHGFVVK | EIHGLVVK | EIHSYLLR |
pattern: EIH[GS][YLF][LV][LV][RK]
MGSLRMFSRMVNDYWVLPNWVACLSALSSCSSVQCSVHGREIHGFVVKREIATDQFLVSGLID
MYMKCGDVKNAEYVFGSIVYEESIRGNPVIWNVMISGYVANGRLPQAVELFLEMLEIGLSPDTS
TMVAVIGLCSQLLDLALGRQIHKFCYSIQLNHDARVETALMDMYFKCGDSKAGLEIFQRSQNRN
IVMWGAVISNFAQSSRPHEALNLFHNHALEYGFVDSAIVLAVLRACSSLAVRPRGMEIHGLVVK
MGFDSDVFVGGALVDMYAKCRDMESAQIVFYRLPARDLVSWNALISGYTRNEFPDEALKAFLDM
QSDGVKPNAVTVASMLSVCAQLSVMKSCKEIHSYLLRQEFESNVLVSNSLITTYAKCGDMKSSW
AIFVSMPERTEVSWNSILLGLGMHGHADETFGLFEKMEAAGMKPDHATFTALLSACSHAGRVEE
GLKYFKRMVEDFTIEPRLEQYTCMVDLLGRAGHLKHAYDIILAMPCTPDDRVWGSLLGSCKIHG
DERLAEVVSDHIFELDPTSIGYRTLLANLYEEYGKWNDVTRIRSDIKGRGLKKTPGCSWIEVDS
NVHVFMAGDQSHKQLEEIYATVECLTNEIRKAGYIPQSPTVSVRHDEVNHENLSSFKDDDLLFP
VASRNHSRTGSAELMIG

### Similar gene clusters

### NC_091666 - Cluster 24 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_091666 - Gene Cluster 24. Type = cyclopeptide. Location: 30146825 - 30775531 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC103437716
Repeat occurs 3 times in a sequence of 363 amino acids
Location between 30230705 and 30232678
Coverage of 5.79 %
Instances:
SGNSSED | SGNSSED | SGNQSRP |
pattern: SGN[SQ]S[RE][DP]
MEYRNDYPNLSSGNSSEDERSDQFSDSGNSSEDDSASETVHSSISDSESVADSGSSSSGNQSR
PFGDGLVPLFDGDRVHDLIKQRFLSSLGLLGAQASVVAVHRNSYSSLVGQARLRSFQIYLKAVE
EKCGGNPNVKYAWFAPSSKDEISKIICHGFGNFEQPQTNGAFGNGVYLAPDDSPLQLVESLNVD
EDGLRHLLLCRVILGRPEVVCPGSKQHHPSSEQFDSGIDSIFAPKKYIVWSTHMNTHILPEYVI
SFRAPNCLKELLKVQEPVKKPTSPWMPFPALIGVLSKFLPPPSIALISKHYKDHRENVITRQQL
IQKVRQIAGDKLLASIIKSFRAKQIKTMQTKAMPPAEAGVRWTV

Repeat found in LOC103428291
Repeat occurs 4 times in a sequence of 848 amino acids
Location between 30288455 and 30291002
Coverage of 3.77 %
Instances:
EIHGHVLK | EIHGFVVK | EIHGLVVK | EIHSYLLR |
pattern: EIH[GS][YLFH][LV][LV][RK]
MAFVVPQGWYSIHYPAIQSEAASHYKFRRLSTPCFLSFTSKFHNFCSGIQFLKAPSRKLILGR
GFSRESSLLEVSSAGQLIKDYVEDGNFEDAITIYVKVLEFGLPVSEFRFFPCLIKAFGGLCDAG
KVREIHGHVLKLGVLDDVYDVNSLLGVYWKCWAVEDAIQLFEKMRERDLVSWNTMISGLCHWGD
YMGSLRMFSRMVNDYWVLPNRVACLSALSSCSSVQCSVHGREIHGFVVKREIATDQFLVSGLID
MYMKCGDVKNAEYVFGSIVYEESIRGNPVIWNVMISGYVANGRLPQAVELFLEMLEIGLSPDTS
TMVAVIGLCSQLLDLALGRQIHKFCYSIQLNHDARVETALMDMYFKCGDSKAGLEIFQRSQNRN
IVMWGAVISNFAQSSRPHEALNLFHNHALEYGFVDSAIVLAVLRACSSLAVRPRGMEIHGLVVK
MGFDSDVFVGGALVDMYAKCRDMESAQIVFYRLPARDLVSWNALISGYTRNEFPDEALKAFLDM
QSDGVKPNAVTVASMLSVCAQLSVMKSCKEIHSYLLRQEFESNVLVSNSLITTYAKCGDMKSSW
AIFESMPERTEVSWNSILLGLGMHGHADETFGLFEKMEAAGMKPDHATFTALLSACSHAGRVEE
GLKYFKRMVEDFTIEPRLEQYTCMVDLLGRAGHLKHAYDIILAMPCTPDDRVWGSLLGSCKIHG
DERLAEVVSDHIFELDPTSIGYRTLLANLYEEYGKWNDVTRIRSDIKGRGLKKTPGCSWIEVDS
NVHVFMAGDQSHKQLEEIYATVECLTNEIRKAGYIPQSPTVSVRHDEVNHENLSSFKDDDLLFP
VASRNHSRTGSAELMIG

Repeat found in LOC103428291
Repeat occurs 4 times in a sequence of 848 amino acids
Location between 30288455 and 30291002
Coverage of 3.77 %
Instances:
EIHGHVLK | EIHGFVVK | EIHGLVVK | EIHSYLLR |
pattern: EIH[GS][YLFH][LV][LV][RK]
MAFVVPQGWYSIHYPAIQSEAASHYKFRRLSTPCFLSFTSKFHNFCSGIQFLKAPSRKLILGR
GFSRESSLLEVSSAGQLIKDYVEDGNFEDAITIYVKVLEFGLPVSEFRFFPCLIKAFGGLCDAG
KVREIHGHVLKLGVLDDVYDVNSLLGVYWKCWAVEDAIQLFEKMRERDLVSWNTMISGLCHWGD
YMGSLRMFSRMVNDYWVLPNRVACLSALSSCSSVQCSVHGREIHGFVVKREIATDQFLVSGLID
MYMKCGDVKNAEYVFGSIVYEESIRGNPVIWNVMISGYVANGRLPQAVELFLEMLEIGLSPDTS
TMVAVIGLCSQLLDLALGRQIHKFCYSIQLNHDARVETALMDMYFKCGDSKAGLEIFQRSQNRN
IVMWGAVISNFAQSSRPHEALNLFHNHALEYGFVDSAIVLAVLRACSSLAVRPRGMEIHGLVVK
MGFDSDVFVGGALVDMYAKCRDMESAQIVFYRLPARDLVSWNALISGYTRNEFPDEALKAFLDM
QSDGVKPNAVTVASMLSVCAQLSVMKSCKEIHSYLLRQEFESNVLVSNSLITTYAKCGDMKSSW
AIFESMPERTEVSWNSILLGLGMHGHADETFGLFEKMEAAGMKPDHATFTALLSACSHAGRVEE
GLKYFKRMVEDFTIEPRLEQYTCMVDLLGRAGHLKHAYDIILAMPCTPDDRVWGSLLGSCKIHG
DERLAEVVSDHIFELDPTSIGYRTLLANLYEEYGKWNDVTRIRSDIKGRGLKKTPGCSWIEVDS
NVHVFMAGDQSHKQLEEIYATVECLTNEIRKAGYIPQSPTVSVRHDEVNHENLSSFKDDDLLFP
VASRNHSRTGSAELMIG

Repeat found in LOC103428291
Repeat occurs 4 times in a sequence of 848 amino acids
Location between 30288455 and 30291002
Coverage of 3.77 %
Instances:
EIHGHVLK | EIHGFVVK | EIHGLVVK | EIHSYLLR |
pattern: EIH[GS][YLFH][LV][LV][RK]
MAFVVPQGWYSIHYPAIQSEAASHYKFRRLSTPCFLSFTSKFHNFCSGIQFLKAPSRKLILGR
GFSRESSLLEVSSAGQLIKDYVEDGNFEDAITIYVKVLEFGLPVSEFRFFPCLIKAFGGLCDAG
KVREIHGHVLKLGVLDDVYDVNSLLGVYWKCWAVEDAIQLFEKMRERDLVSWNTMISGLCHWGD
YMGSLRMFSRMVNDYWVLPNRVACLSALSSCSSVQCSVHGREIHGFVVKREIATDQFLVSGLID
MYMKCGDVKNAEYVFGSIVYEESIRGNPVIWNVMISGYVANGRLPQAVELFLEMLEIGLSPDTS
TMVAVIGLCSQLLDLALGRQIHKFCYSIQLNHDARVETALMDMYFKCGDSKAGLEIFQRSQNRN
IVMWGAVISNFAQSSRPHEALNLFHNHALEYGFVDSAIVLAVLRACSSLAVRPRGMEIHGLVVK
MGFDSDVFVGGALVDMYAKCRDMESAQIVFYRLPARDLVSWNALISGYTRNEFPDEALKAFLDM
QSDGVKPNAVTVASMLSVCAQLSVMKSCKEIHSYLLRQEFESNVLVSNSLITTYAKCGDMKSSW
AIFESMPERTEVSWNSILLGLGMHGHADETFGLFEKMEAAGMKPDHATFTALLSACSHAGRVEE
GLKYFKRMVEDFTIEPRLEQYTCMVDLLGRAGHLKHAYDIILAMPCTPDDRVWGSLLGSCKIHG
DERLAEVVSDHIFELDPTSIGYRTLLANLYEEYGKWNDVTRIRSDIKGRGLKKTPGCSWIEVDS
NVHVFMAGDQSHKQLEEIYATVECLTNEIRKAGYIPQSPTVSVRHDEVNHENLSSFKDDDLLFP
VASRNHSRTGSAELMIG

Repeat found in LOC103428291
Repeat occurs 4 times in a sequence of 848 amino acids
Location between 30288455 and 30291002
Coverage of 3.77 %
Instances:
EIHGHVLK | EIHGFVVK | EIHGLVVK | EIHSYLLR |
pattern: EIH[GS][YLFH][LV][LV][RK]
MAFVVPQGWYSIHYPAIQSEAASHYKFRRLSTPCFLSFTSKFHNFCSGIQFLKAPSRKLILGR
GFSRESSLLEVSSAGQLIKDYVEDGNFEDAITIYVKVLEFGLPVSEFRFFPCLIKAFGGLCDAG
KVREIHGHVLKLGVLDDVYDVNSLLGVYWKCWAVEDAIQLFEKMRERDLVSWNTMISGLCHWGD
YMGSLRMFSRMVNDYWVLPNRVACLSALSSCSSVQCSVHGREIHGFVVKREIATDQFLVSGLID
MYMKCGDVKNAEYVFGSIVYEESIRGNPVIWNVMISGYVANGRLPQAVELFLEMLEIGLSPDTS
TMVAVIGLCSQLLDLALGRQIHKFCYSIQLNHDARVETALMDMYFKCGDSKAGLEIFQRSQNRN
IVMWGAVISNFAQSSRPHEALNLFHNHALEYGFVDSAIVLAVLRACSSLAVRPRGMEIHGLVVK
MGFDSDVFVGGALVDMYAKCRDMESAQIVFYRLPARDLVSWNALISGYTRNEFPDEALKAFLDM
QSDGVKPNAVTVASMLSVCAQLSVMKSCKEIHSYLLRQEFESNVLVSNSLITTYAKCGDMKSSW
AIFESMPERTEVSWNSILLGLGMHGHADETFGLFEKMEAAGMKPDHATFTALLSACSHAGRVEE
GLKYFKRMVEDFTIEPRLEQYTCMVDLLGRAGHLKHAYDIILAMPCTPDDRVWGSLLGSCKIHG
DERLAEVVSDHIFELDPTSIGYRTLLANLYEEYGKWNDVTRIRSDIKGRGLKKTPGCSWIEVDS
NVHVFMAGDQSHKQLEEIYATVECLTNEIRKAGYIPQSPTVSVRHDEVNHENLSSFKDDDLLFP
VASRNHSRTGSAELMIG

Repeat found in LOC103437722
Repeat occurs 3 times in a sequence of 656 amino acids
Location between 30310343 and 30312314
Coverage of 3.66 %
Instances:
EIHGFVVK | EIHGLVVK | EIHSYLLR |
pattern: EIH[GS][YLF][LV][LV][RK]
MGSLRMFSRMVNDYWVLPNWVACLSALSSCSSVQCSVHGREIHGFVVKREIATDQFLVSGLID
MYMKCGDVKNAEYVFGSIVYEESIRGNPVIWNVMISGYVANGRLPQAVELFLEMLEIGLSPDTS
TMVAVIGLCSQLLDLALGRQIHKFCYSIQLNHDARVETALMDMYFKCGDSKAGLEIFQRSQNRN
IVMWGAVISNFAQSSRPHEALNLFHNHALEYGFVDSAIVLAVLRACSSLAVRPRGMEIHGLVVK
MGFDSDVFVGGALVDMYAKCRDMESAQIVFYRLPARDLVSWNALISGYTRNEFPDEALKAFLDM
QSDGVKPNAVTVASMLSVCAQLSVMKSCKEIHSYLLRQEFESNVLVSNSLITTYAKCGDMKSSW
AIFVSMPERTEVSWNSILLGLGMHGHADETFGLFEKMEAAGMKPDHATFTALLSACSHAGRVEE
GLKYFKRMVEDFTIEPRLEQYTCMVDLLGRAGHLKHAYDIILAMPCTPDDRVWGSLLGSCKIHG
DERLAEVVSDHIFELDPTSIGYRTLLANLYEEYGKWNDVTRIRSDIKGRGLKKTPGCSWIEVDS
NVHVFMAGDQSHKQLEEIYATVECLTNEIRKAGYIPQSPTVSVRHDEVNHENLSSFKDDDLLFP
VASRNHSRTGSAELMIG

Repeat found in LOC103437722
Repeat occurs 3 times in a sequence of 656 amino acids
Location between 30310343 and 30312314
Coverage of 3.66 %
Instances:
EIHGFVVK | EIHGLVVK | EIHSYLLR |
pattern: EIH[GS][YLF][LV][LV][RK]
MGSLRMFSRMVNDYWVLPNWVACLSALSSCSSVQCSVHGREIHGFVVKREIATDQFLVSGLID
MYMKCGDVKNAEYVFGSIVYEESIRGNPVIWNVMISGYVANGRLPQAVELFLEMLEIGLSPDTS
TMVAVIGLCSQLLDLALGRQIHKFCYSIQLNHDARVETALMDMYFKCGDSKAGLEIFQRSQNRN
IVMWGAVISNFAQSSRPHEALNLFHNHALEYGFVDSAIVLAVLRACSSLAVRPRGMEIHGLVVK
MGFDSDVFVGGALVDMYAKCRDMESAQIVFYRLPARDLVSWNALISGYTRNEFPDEALKAFLDM
QSDGVKPNAVTVASMLSVCAQLSVMKSCKEIHSYLLRQEFESNVLVSNSLITTYAKCGDMKSSW
AIFVSMPERTEVSWNSILLGLGMHGHADETFGLFEKMEAAGMKPDHATFTALLSACSHAGRVEE
GLKYFKRMVEDFTIEPRLEQYTCMVDLLGRAGHLKHAYDIILAMPCTPDDRVWGSLLGSCKIHG
DERLAEVVSDHIFELDPTSIGYRTLLANLYEEYGKWNDVTRIRSDIKGRGLKKTPGCSWIEVDS
NVHVFMAGDQSHKQLEEIYATVECLTNEIRKAGYIPQSPTVSVRHDEVNHENLSSFKDDDLLFP
VASRNHSRTGSAELMIG

Repeat found in LOC103437722
Repeat occurs 3 times in a sequence of 656 amino acids
Location between 30310343 and 30312314
Coverage of 3.66 %
Instances:
EIHGFVVK | EIHGLVVK | EIHSYLLR |
pattern: EIH[GS][YLF][LV][LV][RK]
MGSLRMFSRMVNDYWVLPNWVACLSALSSCSSVQCSVHGREIHGFVVKREIATDQFLVSGLID
MYMKCGDVKNAEYVFGSIVYEESIRGNPVIWNVMISGYVANGRLPQAVELFLEMLEIGLSPDTS
TMVAVIGLCSQLLDLALGRQIHKFCYSIQLNHDARVETALMDMYFKCGDSKAGLEIFQRSQNRN
IVMWGAVISNFAQSSRPHEALNLFHNHALEYGFVDSAIVLAVLRACSSLAVRPRGMEIHGLVVK
MGFDSDVFVGGALVDMYAKCRDMESAQIVFYRLPARDLVSWNALISGYTRNEFPDEALKAFLDM
QSDGVKPNAVTVASMLSVCAQLSVMKSCKEIHSYLLRQEFESNVLVSNSLITTYAKCGDMKSSW
AIFVSMPERTEVSWNSILLGLGMHGHADETFGLFEKMEAAGMKPDHATFTALLSACSHAGRVEE
GLKYFKRMVEDFTIEPRLEQYTCMVDLLGRAGHLKHAYDIILAMPCTPDDRVWGSLLGSCKIHG
DERLAEVVSDHIFELDPTSIGYRTLLANLYEEYGKWNDVTRIRSDIKGRGLKKTPGCSWIEVDS
NVHVFMAGDQSHKQLEEIYATVECLTNEIRKAGYIPQSPTVSVRHDEVNHENLSSFKDDDLLFP
VASRNHSRTGSAELMIG

### Similar gene clusters

### NC_091667 - Cluster 25 - Saccharide-fatty_acid

### Gene cluster description

Download cluster GenBank file
NC_091667 - Gene Cluster 25. Type = saccharide-fatty_acid. Location: 766822 - 895016 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091667 - Cluster 26 - Polyketide

### Gene cluster description

Download cluster GenBank file
NC_091667 - Gene Cluster 26. Type = polyketide. Location: 26804929 - 26966585 nt. Click on genes for more information.
Show pHMM detection rules used
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091667 - Cluster 27 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_091667 - Gene Cluster 27. Type = saccharide. Location: 28875068 - 29034452 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091667 - Cluster 28 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_091667 - Gene Cluster 28. Type = saccharide. Location: 36666784 - 36742600 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091668 - Cluster 29 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_091668 - Gene Cluster 29. Type = saccharide. Location: 5833996 - 5930836 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091668 - Cluster 30 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_091668 - Gene Cluster 30. Type = cyclopeptide. Location: 10977787 - 11298465 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NC_091668 - Cluster 31 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_091668 - Gene Cluster 31. Type = saccharide. Location: 13058928 - 13256255 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091668 - Cluster 32 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_091668 - Gene Cluster 32. Type = cyclopeptide. Location: 25685768 - 26273452 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC103441689
Repeat occurs 7 times in a sequence of 314 amino acids
Location between 26140737 and 26143476
Coverage of 22.29 %
Instances:
DDDDDDDKEE | DDDDDDKEED | DDDDDKEEDD | DDDDKEEDDD | DDDKEEDDDD
DDDDSDEEDE | DDDSDEEDEY |
pattern: DDD[SDK][SDKE][DKE][DKE][DKE][DE][YDE]
MAPSLICSFVMRRTVILAECSNHQDQEDVARLALNLLETLDRSMRRITYERDGYTFNYLIDCG
YTYSVVADEDIGRESPHAFLNQVRKDFLGKYSAQFVKALIANSLSNELGSKLKEHMEYVAAKVS
KDEQVAMEYIDKNRGWHMRRKSKAPSLSYSFVAHGTVVLADWLQFDHTVSGLAVDYLSELPCSI
NKITYDRGGCTINYLLDSNFTYCVVAAKAMGRKIPLALLDQIKKDFTARFGGGLAVATVENSLN
KDFRSKLKERMRHAEVKAAQASKDEGVTMENIEKDEEEDDDDDDDKEEDDDDSDEEDEY

### Similar gene clusters

### NC_091669 - Cluster 33 - Terpene

### Gene cluster description

Download cluster GenBank file
NC_091669 - Gene Cluster 33. Type = terpene. Location: 1901487 - 2022427 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091669 - Cluster 34 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_091669 - Gene Cluster 34. Type = saccharide. Location: 10003544 - 10272600 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### Similar known gene clusters

### NC_091669 - Cluster 35 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_091669 - Gene Cluster 35. Type = saccharide. Location: 34063668 - 34127588 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091670 - Cluster 36 - Fatty_acid

### Gene cluster description

Download cluster GenBank file
NC_091670 - Gene Cluster 36. Type = fatty_acid. Location: 1788099 - 2032106 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091670 - Cluster 37 - Polyketide

### Gene cluster description

Download cluster GenBank file
NC_091670 - Gene Cluster 37. Type = polyketide. Location: 4433183 - 4704135 nt. Click on genes for more information.
Show pHMM detection rules used
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091670 - Cluster 38 - Alkaloid-fatty_acid

### Gene cluster description

Download cluster GenBank file
NC_091670 - Gene Cluster 38. Type = alkaloid-fatty_acid. Location: 35766352 - 36002258 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091670 - Cluster 39 - Terpene

### Gene cluster description

Download cluster GenBank file
NC_091670 - Gene Cluster 39. Type = terpene. Location: 41135034 - 41351339 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091671 - Cluster 40 - Lignan

### Gene cluster description

Download cluster GenBank file
NC_091671 - Gene Cluster 40. Type = lignan. Location: 710387 - 865795 nt. Click on genes for more information.
Show pHMM detection rules used
plants/lignan: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Dirigent]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091671 - Cluster 41 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_091671 - Gene Cluster 41. Type = saccharide. Location: 1806257 - 2025762 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091671 - Cluster 42 - Terpene

### Gene cluster description

Download cluster GenBank file
NC_091671 - Gene Cluster 42. Type = terpene. Location: 6133389 - 6188598 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091671 - Cluster 43 - Fatty_acid

### Gene cluster description

Download cluster GenBank file
NC_091671 - Gene Cluster 43. Type = fatty_acid. Location: 7466806 - 7668105 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091671 - Cluster 44 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_091671 - Gene Cluster 44. Type = saccharide. Location: 25922236 - 26051569 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091671 - Cluster 45 - Putative

### Gene cluster description

Download cluster GenBank file
NC_091671 - Gene Cluster 45. Type = putative. Location: 37258654 - 37562031 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091672 - Cluster 46 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_091672 - Gene Cluster 46. Type = saccharide. Location: 766449 - 830186 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091672 - Cluster 47 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_091672 - Gene Cluster 47. Type = saccharide. Location: 1676902 - 1772746 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091673 - Cluster 48 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_091673 - Gene Cluster 48. Type = cyclopeptide. Location: 6025346 - 6294676 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC103451960
Repeat occurs 7 times in a sequence of 816 amino acids
Location between 6129114 and 6132525
Coverage of 5.15 %
Instances:
EKEREI | EKEQRR | EKEKQR | EKEREK | EKERER
EKEEDL | EKERSR |
pattern: EKE[RKQE][QERDS][RLKI]
MIRTPFPPRPPGATGLLQRAPVPGIPGVRPIIPPVVRPILPIVTPAEKPQTTVYVGKIAPTVD
NEFMKYLLQLCGPVKSWKRAQDPTDGTPRRFGFCEFESAEGVLRALRLLTNLSIDGQDLVLNVN
QATREYLERVVKKKTENSKKLKEAEAAEKGDGSALDVEKIVPSNPSVQDSKEEDGNSSNKENDP
ANFGIVTDEDKEADREAMEKLTSLIEERIKNKPLPPPPPTPAPGDGTRNSNSALPAKSRDGDSD
VDITRNDAYEEKIDEEITSDNKTTSEQGSPQTSSHDRSRKQDRRSRDNERDMKREKEREIERYE
RETERERVRKEKEQRRKLEDAEHQYEKCLKDWEYREREKEKQRQYEKEREKERERKRRKEIIYE
EDDEDEDSRKKWRRSVLEEKRKRRLREKEEDLADRQKEEEEIADAKGRAEEEKQLQQERDALRD
SSGHVANGSEKAALAEEFGVQLKDKATEQDNGGDSGHENHIGDGTLQNGNSDDESTMTSVSASE
PQQSGSAPAKKLGFGLLGSGKRTAVPSVFNEEDDDAHKDKKMRPLVPIDYSTEELQAVQPISGT
APSNLAAAAEFAKRISNASSKEEKPVTEKERSRRSNDRSSHRDRDQNGDDSNRTRDEHREKTID
RDTDRDHAMNKPRTKDNKKLLDAKQLIDMIPKTKEELFSYEINWAIYEHHALHERMRPWISKKI
TEFLGEEETTLVDYIVSSTQEHVGAERMLQLLQSILDEEAEMFVLKMWRMLIFEIKKVETVHDR
GTLPTITPLLFSFKNSKHRCVLFLFSIRGCDLIHTPAFPFYASPFVFVP

Repeat found in LOC103451960
Repeat occurs 7 times in a sequence of 816 amino acids
Location between 6129114 and 6132525
Coverage of 5.15 %
Instances:
EKEREI | EKEQRR | EKEKQR | EKEREK | EKERER
EKEEDL | EKERSR |
pattern: EKE[RKQE][QERDS][RLKI]
MIRTPFPPRPPGATGLLQRAPVPGIPGVRPIIPPVVRPILPIVTPAEKPQTTVYVGKIAPTVD
NEFMKYLLQLCGPVKSWKRAQDPTDGTPRRFGFCEFESAEGVLRALRLLTNLSIDGQDLVLNVN
QATREYLERVVKKKTENSKKLKEAEAAEKGDGSALDVEKIVPSNPSVQDSKEEDGNSSNKENDP
ANFGIVTDEDKEADREAMEKLTSLIEERIKNKPLPPPPPTPAPGDGTRNSNSALPAKSRDGDSD
VDITRNDAYEEKIDEEITSDNKTTSEQGSPQTSSHDRSRKQDRRSRDNERDMKREKEREIERYE
RETERERVRKEKEQRRKLEDAEHQYEKCLKDWEYREREKEKQRQYEKEREKERERKRRKEIIYE
EDDEDEDSRKKWRRSVLEEKRKRRLREKEEDLADRQKEEEEIADAKGRAEEEKQLQQERDALRD
SSGHVANGSEKAALAEEFGVQLKDKATEQDNGGDSGHENHIGDGTLQNGNSDDESTMTSVSASE
PQQSGSAPAKKLGFGLLGSGKRTAVPSVFNEEDDDAHKDKKMRPLVPIDYSTEELQAVQPISGT
APSNLAAAAEFAKRISNASSKEEKPVTEKERSRRSNDRSSHRDRDQNGDDSNRTRDEHREKTID
RDTDRDHAMNKPRTKDNKKLLDAKQLIDMIPKTKEELFSYEINWAIYEHHALHERMRPWISKKI
TEFLGEEETTLVDYIVSSTQEHVGAERMLQLLQSILDEEAEMFVLKMWRMLIFEIKKVETVHDR
GTLPTITPLLFSFKNSKHRCVLFLFSIRGCDLIHTPAFPFYASPFVFVP

Repeat found in LOC103451960
Repeat occurs 7 times in a sequence of 816 amino acids
Location between 6129114 and 6132525
Coverage of 5.15 %
Instances:
EKEREI | EKEQRR | EKEKQR | EKEREK | EKERER
EKEEDL | EKERSR |
pattern: EKE[RKQE][QERDS][RLKI]
MIRTPFPPRPPGATGLLQRAPVPGIPGVRPIIPPVVRPILPIVTPAEKPQTTVYVGKIAPTVD
NEFMKYLLQLCGPVKSWKRAQDPTDGTPRRFGFCEFESAEGVLRALRLLTNLSIDGQDLVLNVN
QATREYLERVVKKKTENSKKLKEAEAAEKGDGSALDVEKIVPSNPSVQDSKEEDGNSSNKENDP
ANFGIVTDEDKEADREAMEKLTSLIEERIKNKPLPPPPPTPAPGDGTRNSNSALPAKSRDGDSD
VDITRNDAYEEKIDEEITSDNKTTSEQGSPQTSSHDRSRKQDRRSRDNERDMKREKEREIERYE
RETERERVRKEKEQRRKLEDAEHQYEKCLKDWEYREREKEKQRQYEKEREKERERKRRKEIIYE
EDDEDEDSRKKWRRSVLEEKRKRRLREKEEDLADRQKEEEEIADAKGRAEEEKQLQQERDALRD
SSGHVANGSEKAALAEEFGVQLKDKATEQDNGGDSGHENHIGDGTLQNGNSDDESTMTSVSASE
PQQSGSAPAKKLGFGLLGSGKRTAVPSVFNEEDDDAHKDKKMRPLVPIDYSTEELQAVQPISGT
APSNLAAAAEFAKRISNASSKEEKPVTEKERSRRSNDRSSHRDRDQNGDDSNRTRDEHREKTID
RDTDRDHAMNKPRTKDNKKLLDAKQLIDMIPKTKEELFSYEINWAIYEHHALHERMRPWISKKI
TEFLGEEETTLVDYIVSSTQEHVGAERMLQLLQSILDEEAEMFVLKMWRMLIFEIKKVETVHDR
GTLPTITPLLFSFKNSKHRCVLFLFSIRGCDLIHTPAFPFYASPFVFVP

Repeat found in LOC103451960
Repeat occurs 7 times in a sequence of 816 amino acids
Location between 6129114 and 6132525
Coverage of 5.15 %
Instances:
EKEREI | EKEQRR | EKEKQR | EKEREK | EKERER
EKEEDL | EKERSR |
pattern: EKE[RKQE][QERDS][RLKI]
MIRTPFPPRPPGATGLLQRAPVPGIPGVRPIIPPVVRPILPIVTPAEKPQTTVYVGKIAPTVD
NEFMKYLLQLCGPVKSWKRAQDPTDGTPRRFGFCEFESAEGVLRALRLLTNLSIDGQDLVLNVN
QATREYLERVVKKKTENSKKLKEAEAAEKGDGSALDVEKIVPSNPSVQDSKEEDGNSSNKENDP
ANFGIVTDEDKEADREAMEKLTSLIEERIKNKPLPPPPPTPAPGDGTRNSNSALPAKSRDGDSD
VDITRNDAYEEKIDEEITSDNKTTSEQGSPQTSSHDRSRKQDRRSRDNERDMKREKEREIERYE
RETERERVRKEKEQRRKLEDAEHQYEKCLKDWEYREREKEKQRQYEKEREKERERKRRKEIIYE
EDDEDEDSRKKWRRSVLEEKRKRRLREKEEDLADRQKEEEEIADAKGRAEEEKQLQQERDALRD
SSGHVANGSEKAALAEEFGVQLKDKATEQDNGGDSGHENHIGDGTLQNGNSDDESTMTSVSASE
PQQSGSAPAKKLGFGLLGSGKRTAVPSVFNEEDDDAHKDKKMRPLVPIDYSTEELQAVQPISGT
APSNLAAAAEFAKRISNASSKEEKPVTEKERSRRSNDRSSHRDRDQNGDDSNRTRDEHREKTID
RDTDRDHAMNKPRTKDNKKLLDAKQLIDMIPKTKEELFSYEINWAIYEHHALHERMRPWISKKI
TEFLGEEETTLVDYIVSSTQEHVGAERMLQLLQSILDEEAEMFVLKMWRMLIFEIKKVETVHDR
GTLPTITPLLFSFKNSKHRCVLFLFSIRGCDLIHTPAFPFYASPFVFVP

### Similar gene clusters

### NC_091673 - Cluster 49 - Alkaloid

### Gene cluster description

Download cluster GenBank file
NC_091673 - Gene Cluster 49. Type = alkaloid. Location: 6925531 - 7189291 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091673 - Cluster 50 - Transporter_associated

### Gene cluster description

Download cluster GenBank file
NC_091673 - Gene Cluster 50. Type = transporter_associated. Location: 7490409 - 7646029 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/transporter_associated: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[MatE/LTP_2/ABC2_membrane/ABC_tran]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091673 - Cluster 51 - Fatty_acid

### Gene cluster description

Download cluster GenBank file
NC_091673 - Gene Cluster 51. Type = fatty_acid. Location: 7940464 - 8028050 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091674 - Cluster 52 - Saccharide-polyketide

### Gene cluster description

Download cluster GenBank file
NC_091674 - Gene Cluster 52. Type = saccharide-polyketide. Location: 24686976 - 24878218 nt. Click on genes for more information.
Show pHMM detection rules used
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091675 - Cluster 53 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_091675 - Gene Cluster 53. Type = saccharide. Location: 1636951 - 1846060 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091675 - Cluster 54 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_091675 - Gene Cluster 54. Type = saccharide. Location: 4328809 - 4421134 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091675 - Cluster 55 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_091675 - Gene Cluster 55. Type = cyclopeptide. Location: 6597224 - 7083438 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC103400202
Repeat occurs 12 times in a sequence of 663 amino acids
Location between 6961158 and 6988171
Coverage of 16.29 %
Instances:
VNELEQKLQ | VNELEKELQ | VNELEKELQ | VNEAEKKMD | VNELEKELQ
VNEAKKKID | VNELEKELQ | VNEVEKMDD | VNELEKELQ | VNEAEKKID
VNELEKELQ | VNEAEKKMD |
pattern: VNE[LVA][KE][KQ][KEM][LDIM][DQ]
MAPSKLAILSIFLALIFSQIRADNPARLPVRGPGASPSDGPHQKIKPPRDGRHLSVGGLFAKK
GQKKNGQRNGVSPEEREKVIQGLTEEGDQIIQELREEGGKVIQEMLDSIIQEMSGSISSLPTEI
KFLQKNGSLVEQQVRKAHARADELEKKVNELEQKLQSQRKEKEELESRTNEAEEKIDDLLSEIE
NIGKTNDEQETKIRKTEHALEVKVAEVEMWKAKFEATLKAKVLNEVNELEKELQSQRNEKGDLK
DRANEAEKKMDDLLSKLENVNELEKELQSQRNEKRDLKDRVNEAEKKMDDLLSKIENVNELEKE
LQSQHNEKRDLKDRVNEAKKKIDDLLSKIENVNELEKELQMQRNEKGDLKDQVNEVEKMDDLLS
KIENVNELEKELQLQRNEKRDLKDRVNEAEKKIDDLFSKIENVNELEKELQSQRNEKGDLKDRV
NEAEKKMDDLLSKIENALEKKAQAEKWAEPHVETTKTKWIPAIKEQWEVVKDTVEPHVKSLSTK
TFEVYEVSKTTLAPHVIKAQEVVDPYFQEAKKFSKPYVDQVATVAKPHVDKVRVVLKPYTKKAV
IAYEKFLKSATAYHHQVQGTVKDLLKRHELTRPLATKELEWFAASALLALPIIILFRIFSSLFC
TKTKNPVRGTNHTRRKAKRGHPEK

Repeat found in LOC103400202
Repeat occurs 12 times in a sequence of 663 amino acids
Location between 6961158 and 6988171
Coverage of 16.29 %
Instances:
VNELEQKLQ | VNELEKELQ | VNEAEKKID | VNELEKELQ | VNELEKELQ
VNEAKKKID | VNELEKELQ | VNEVEKMDD | VNELEKELQ | VNEAEKKID
VNELEKELQ | VNEAEKKMD |
pattern: VNE[LVA][KE][KQ][KEM][LDIM][DQ]
MAPSKLAILSIFLALIFSQIRADNPARLPVRGPGASPSDGPHQKIKPPRDGRHLSVGGLFAKK
GQKKNGQRNGVSPEEREKVIQGLTEEGDQIIQELREEGGKVIQEMLDSIIQEMSGSISSLPTEI
KFLQKNGSLVEQQVRKAHARADELEKKVNELEQKLQSQRKEKEELESRTNEAEEKIDDLLSEIE
NIGKTNDEQETKIRKTEHALEVKVAEVEMWKAKFEATLKAKVLNEVNELEKELQSQRNEKGDLK
DRVNEAEKKIDDLLSKIENVNELEKELQSQRNEKGDLKDRANEAEKKMDDLLSKLENVNELEKE
LQSQHNEKRDLKDRVNEAKKKIDDLLSKIENVNELEKELQMQRNEKGDLKDQVNEVEKMDDLLS
KIENVNELEKELQLQRNEKRDLKDRVNEAEKKIDDLFSKIENVNELEKELQSQRNEKGDLKDRV
NEAEKKMDDLLSKIENALEKKAQAEKWAEPHVETTKTKWIPAIKEQWEVVKDTVEPHVKSLSTK
TFEVYEVSKTTLAPHVIKAQEVVDPYFQEAKKFSKPYVDQVATVAKPHVDKVRVVLKPYTKKAV
IAYEKFLKSATAYHHQVQGTVKDLLKRHELTRPLATKELEWFAASALLALPIIILFRIFSSLFC
TKTKNPVRGTNHTRRKAKRGHPEK

Repeat found in LOC103400202
Repeat occurs 8 times in a sequence of 588 amino acids
Location between 6961158 and 6988171
Coverage of 17.69 %
Instances:
ELEKKVNELEQKL | ELEQKLQSQRKEK | ELESRTNEAEEKI | ELEKELQSQRNEK | ELEKELQSQRNEK
ELEKELQSQRNEK | ELEKELQSQRNEK | ELEWFAASALLAL |
pattern: ELE[SWKQ][RFKE][ALVT][QNA][SE][LQA][RLE][QENKL][KEA][LKI]
MAPSKLAILSIFLALIFSQIRADNPARLPVRGPGASPSDGPHQKIKPPRDGRHLSVGGLFAKK
GQKKNGQRNGVSPEEREKVIQGLTEEGDQIIQELREEGGKVIQEMLDSIIQEMSGSISSLPTEI
KFLQKNGSLVEQQVRKAHARADELEKKVNELEQKLQSQRKEKEELESRTNEAEEKIDDLLSEIE
NIGKTNDEQETKIRKTEHALEVKVAEVEMWKAKFEATLKAKVLNEVNELEKELQSQRNEKGDLK
DRVNEAEKKIDDLLSKIENVNELEKELQSQRNEKGDLKDRANEAEKKMDDLLSKLENVNELEKE
LQSQRNEKRDLKDRVNEAEKKMDDLLSKIENVNELEKELQSQRNEKGDLKDRVNEAEKKMDDLL
SKIENALEKKAQAEKWAEPHVETTKTKWIPAIKEQWEVVKDTVEPHVKSLSTKTFEVYEVSKTT
LAPHVIKAQEVVDPYFQEAKKFSKPYVDQVATVAKPHVDKVRVVLKPYTKKAVIAYEKFLKSAT
AYHHQVQGTVKDLLKRHELTRPLATKELEWFAASALLALPIIILFRIFSSLFCTKTKNPVRGTN
HTRRKAKRGHPEK

Repeat found in LOC103400202
Repeat occurs 9 times in a sequence of 609 amino acids
Location between 6961158 and 6988171
Coverage of 19.21 %
Instances:
ELEKKVNELEQKL | ELEQKLQSQRKEK | ELESRTNEAEEKI | ELEKELQSQRNEK | ELEKELQSQRNEK
ELEKELQSQRNEK | ELEKELQMQRNEK | ELEKELQSQRNEK | ELEWFAASALLAL |
pattern: ELE[SWKQ][RFKE][ALVT][QNA][SEM][LQA][RLE][QENKL][KEA][LKI]
MAPSKLAILSIFLALIFSQIRADNPARLPVRGPGASPSDGPHQKIKPPRDGRHLSVGGLFAKK
GQKKNGQRNGVSPEEREKVIQGLTEEGDQIIQELREEGGKVIQEMLDSIIQEMSGSISSLPTEI
KFLQKNGSLVEQQVRKAHARADELEKKVNELEQKLQSQRKEKEELESRTNEAEEKIDDLLSEIE
NIGKTNDEQETKIRKTEHALEVKVAEVEMWKAKFEATLKAKVLNEVNELEKELQSQRNEKGDLK
DRVNEAEKKIDDLLSKIENVNELEKELQSQRNEKGDLKDRANEAEKKMDDLLSKLENVNELEKE
LQSQRNEKRDLKDRVNEAEKKMDDLLSKIENVNELEKELQMQRNEKGDLKDQVNELEKELQSQR
NEKGDLKDRVNEAEKKMDDLLSKIENALEKKAQAEKWAEPHVETTKTKWIPAIKEQWEVVKDTV
EPHVKSLSTKTFEVYEVSKTTLAPHVIKAQEVVDPYFQEAKKFSKPYVDQVATVAKPHVDKVRV
VLKPYTKKAVIAYEKFLKSATAYHHQVQGTVKDLLKRHELTRPLATKELEWFAASALLALPIII
LFRIFSSLFCTKTKNPVRGTNHTRRKAKRGHPEK

Repeat found in LOC103400202
Repeat occurs 11 times in a sequence of 647 amino acids
Location between 6961158 and 6988171
Coverage of 15.3 %
Instances:
VNELEQKLQ | VNELEKELQ | VNEAEKKID | VNELEKELQ | VNELEKELQ
VNEAEKKMD | VNELEKELQ | VNELEKELQ | VNEAEKKID | VNELEKELQ
VNEAEKKMD |
pattern: VNE[LA]E[KQ][KE][LIM][DQ]
MAPSKLAILSIFLALIFSQIRADNPARLPVRGPGASPSDGPHQKIKPPRDGRHLSVGGLFAKK
GQKKNGQRNGVSPEEREKVIQGLTEEGDQIIQELREEGGKVIQEMLDSIIQEMSGSISSLPTEI
KFLQKNGSLVEQQVRKAHARADELEKKVNELEQKLQSQRKEKEELESRTNEAEEKIDDLLSEIE
NIGKTNDEQETKIRKTEHALEVKVAEVEMWKAKFEATLKAKVLNEVNELEKELQSQRNEKGDLK
DRVNEAEKKIDDLLSKIENVNELEKELQSQRNEKGDLKDRANEAEKKMDDLLSKLENVNELEKE
LQSQRNEKRDLKDRVNEAEKKMDDLLSKIENVNELEKELQMQRNEKGDLKDQVNELEKELQLQR
NEKRDLKDRVNEAEKKIDDLFSKIENVNELEKELQSQRNEKGDLKDRVNEAEKKMDDLLSKIEN
ALEKKAQAEKWAEPHVETTKTKWIPAIKEQWEVVKDTVEPHVKSLSTKTFEVYEVSKTTLAPHV
IKAQEVVDPYFQEAKKFSKPYVDQVATVAKPHVDKVRVVLKPYTKKAVIAYEKFLKSATAYHHQ
VQGTVKDLLKRHELTRPLATKELEWFAASALLALPIIILFRIFSSLFCTKTKNPVRGTNHTRRK
AKRGHPEK

Repeat found in LOC103400202
Repeat occurs 12 times in a sequence of 663 amino acids
Location between 6961158 and 6988171
Coverage of 16.29 %
Instances:
VNELEQKLQ | VNELEKELQ | VNEAEKKID | VNELEKELQ | VNELEKELQ
VNEAEKKMD | VNELEKELQ | VNEVEKMDD | VNELEKELQ | VNEAEKKID
VNELEKELQ | VNEAEKKMD |
pattern: VNE[LVA]E[KQ][KEM][LDIM][DQ]
MAPSKLAILSIFLALIFSQIRADNPARLPVRGPGASPSDGPHQKIKPPRDGRHLSVGGLFAKK
GQKKNGQRNGVSPEEREKVIQGLTEEGDQIIQELREEGGKVIQEMLDSIIQEMSGSISSLPTEI
KFLQKNGSLVEQQVRKAHARADELEKKVNELEQKLQSQRKEKEELESRTNEAEEKIDDLLSEIE
NIGKTNDEQETKIRKTEHALEVKVAEVEMWKAKFEATLKAKVLNEVNELEKELQSQRNEKGDLK
DRVNEAEKKIDDLLSKIENVNELEKELQSQRNEKGDLKDRANEAEKKMDDLLSKLENVNELEKE
LQSQRNEKRDLKDRVNEAEKKMDDLLSKIENVNELEKELQMQRNEKGDLKDQVNEVEKMDDLLS
KIENVNELEKELQLQRNEKRDLKDRVNEAEKKIDDLFSKIENVNELEKELQSQRNEKGDLKDRV
NEAEKKMDDLLSKIENALEKKAQAEKWAEPHVETTKTKWIPAIKEQWEVVKDTVEPHVKSLSTK
TFEVYEVSKTTLAPHVIKAQEVVDPYFQEAKKFSKPYVDQVATVAKPHVDKVRVVLKPYTKKAV
IAYEKFLKSATAYHHQVQGTVKDLLKRHELTRPLATKELEWFAASALLALPIIILFRIFSSLFC
TKTKNPVRGTNHTRRKAKRGHPEK

Repeat found in LOC103400202
Repeat occurs 11 times in a sequence of 647 amino acids
Location between 6961158 and 6988171
Coverage of 18.7 %
Instances:
VNELEQKLQSQ | VNELEKELQSQ | VNEAEKKIDDL | VNELEKELQSQ | VNELEKELQSQ
VNEAEKKMDDL | VNELEKELQSQ | VNEAKKKIDDL | VNELEKELQMQ | VNELEKELQSQ
VNEAEKKMDDL |
pattern: VNE[LA][KE][KQ][KE][LIM][DQ][SDM][LQ]
MAPSKLAILSIFLALIFSQIRADNPARLPVRGPGASPSDGPHQKIKPPRDGRHLSVGGLFAKK
GQKKNGQRNGVSPEEREKVIQGLTEEGDQIIQELREEGGKVIQEMLDSIIQEMSGSISSLPTEI
KFLQKNGSLVEQQVRKAHARADELEKKVNELEQKLQSQRKEKEELESRTNEAEEKIDDLLSEIE
NIGKTNDEQETKIRKTEHALEVKVAEVEMWKAKFEATLKAKVLNEVNELEKELQSQRNEKGDLK
DRVNEAEKKIDDLLSKIENVNELEKELQSQRNEKGDLKDRANEAEKKMDDLLSKLENVNELEKE
LQSQRNEKRDLKDRVNEAEKKMDDLLSKIENVNELEKELQSQHNEKRDLKDRVNEAKKKIDDLL
SKIENVNELEKELQMQRNEKGDLKDQVNELEKELQSQRNEKGDLKDRVNEAEKKMDDLLSKIEN
ALEKKAQAEKWAEPHVETTKTKWIPAIKEQWEVVKDTVEPHVKSLSTKTFEVYEVSKTTLAPHV
IKAQEVVDPYFQEAKKFSKPYVDQVATVAKPHVDKVRVVLKPYTKKAVIAYEKFLKSATAYHHQ
VQGTVKDLLKRHELTRPLATKELEWFAASALLALPIIILFRIFSSLFCTKTKNPVRGTNHTRRK
AKRGHPEK

Repeat found in LOC103400202
Repeat occurs 13 times in a sequence of 685 amino acids
Location between 6961158 and 6988171
Coverage of 17.08 %
Instances:
VNELEQKLQ | VNELEKELQ | VNEAEKKID | VNELEKELQ | VNELEKELQ
VNEAEKKMD | VNELEKELQ | VNEAKKKID | VNELEKELQ | VNELEKELQ
VNEAEKKID | VNELEKELQ | VNEAEKKMD |
pattern: VNE[LA][KE][KQ][KE][LIM][DQ]
MAPSKLAILSIFLALIFSQIRADNPARLPVRGPGASPSDGPHQKIKPPRDGRHLSVGGLFAKK
GQKKNGQRNGVSPEEREKVIQGLTEEGDQIIQELREEGGKVIQEMLDSIIQEMSGSISSLPTEI
KFLQKNGSLVEQQVRKAHARADELEKKVNELEQKLQSQRKEKEELESRTNEAEEKIDDLLSEIE
NIGKTNDEQETKIRKTEHALEVKVAEVEMWKAKFEATLKAKVLNEVNELEKELQSQRNEKGDLK
DRVNEAEKKIDDLLSKIENVNELEKELQSQRNEKGDLKDRANEAEKKMDDLLSKLENVNELEKE
LQSQRNEKRDLKDRVNEAEKKMDDLLSKIENVNELEKELQSQHNEKRDLKDRVNEAKKKIDDLL
SKIENVNELEKELQMQRNEKGDLKDQVNELEKELQLQRNEKRDLKDRVNEAEKKIDDLFSKIEN
VNELEKELQSQRNEKGDLKDRVNEAEKKMDDLLSKIENALEKKAQAEKWAEPHVETTKTKWIPA
IKEQWEVVKDTVEPHVKSLSTKTFEVYEVSKTTLAPHVIKAQEVVDPYFQEAKKFSKPYVDQVA
TVAKPHVDKVRVVLKPYTKKAVIAYEKFLKSATAYHHQVQGTVKDLLKRHELTRPLATKELEWF
AASALLALPIIILFRIFSSLFCTKTKNPVRGTNHTRRKAKRGHPEK

Repeat found in LOC103400202
Repeat occurs 12 times in a sequence of 663 amino acids
Location between 6961158 and 6988171
Coverage of 16.29 %
Instances:
VNELEQKLQ | VNELEKELQ | VNEAEKKID | VNELEKELQ | VNELEKELQ
VNEAEKKMD | VNELEKELQ | VNEAKKKID | VNELEKELQ | VNEVEKMDD
VNELEKELQ | VNEAEKKMD |
pattern: VNE[LVA][KE][KQ][KEM][LDIM][DQ]
MAPSKLAILSIFLALIFSQIRADNPARLPVRGPGASPSDGPHQKIKPPRDGRHLSVGGLFAKK
GQKKNGQRNGVSPEEREKVIQGLTEEGDQIIQELREEGGKVIQEMLDSIIQEMSGSISSLPTEI
KFLQKNGSLVEQQVRKAHARADELEKKVNELEQKLQSQRKEKEELESRTNEAEEKIDDLLSEIE
NIGKTNDEQETKIRKTEHALEVKVAEVEMWKAKFEATLKAKVLNEVNELEKELQSQRNEKGDLK
DRVNEAEKKIDDLLSKIENVNELEKELQSQRNEKGDLKDRANEAEKKMDDLLSKLENVNELEKE
LQSQRNEKRDLKDRVNEAEKKMDDLLSKIENVNELEKELQSQHNEKRDLKDRVNEAKKKIDDLL
SKIENVNELEKELQMQRNEKGDLKDQVNEVEKMDDLLSKIENVNELEKELQSQRNEKGDLKDRV
NEAEKKMDDLLSKIENALEKKAQAEKWAEPHVETTKTKWIPAIKEQWEVVKDTVEPHVKSLSTK
TFEVYEVSKTTLAPHVIKAQEVVDPYFQEAKKFSKPYVDQVATVAKPHVDKVRVVLKPYTKKAV
IAYEKFLKSATAYHHQVQGTVKDLLKRHELTRPLATKELEWFAASALLALPIIILFRIFSSLFC
TKTKNPVRGTNHTRRKAKRGHPEK

Repeat found in LOC103400202
Repeat occurs 11 times in a sequence of 636 amino acids
Location between 6975777 and 6988171
Coverage of 15.57 %
Instances:
VNELEQKLQ | VNELEKELQ | VNEAEKKID | VNELEKELQ | VNELEKELQ
VNEAKKKID | VNELEKELQ | VNELEKELQ | VNEAEKKID | VNELEKELQ
VNEAEKKMD |
pattern: VNE[LA][KE][KQ][KE][LIM][DQ]
MAPSKLAILSIFLALIFSQIRADNPARLPVRGPGASPSDGPHQKIKPPRDGRHLSVGGLFAKK
GQKKNGQRNGVSPEEREKVIQGLTEEGDQIIQELREEGGKVIQEMLDSIIQEMSGSISSLPTEI
KFLQKNGSLVEQQVRKAHARADELEKKVNELEQKLQSQRKEKEELESRTNEAEEKIDDLLSEIE
NIGKTNDEQETKIRKTEHALEVKVAEVEMWKAKFEATLKAKVLNEVNELEKELQSQRNEKGDLK
DRVNEAEKKIDDLLSKIENVNELEKELQSQRNEKGDLKDRANEAEKKMDDLLSKLENVNELEKE
LQSQHNEKRDLKDRVNEAKKKIDDLLSKIENVNELEKELQMQRNEKGDLKDQVNELEKELQLQR
NEKRDLKDRVNEAEKKIDDLFSKIENVNELEKELQSQRNEKGDLKDRVNEAEKKMDDLLSKIEN
ALEKKAQAEKWAEPHVETTKTKSIPAIKEQWVVVKDTVELHVISLSNKSIEVYEVSKTTLAPHV
IKAQEVVDIYFQEAKKFSKPYVDQLTTVTKPHVDKAVIAYEKFLKPASTYHHQVQGTVKDLLKR
HELTRPLATKELEWFAASALVALLIIIQFRIFSSLFCTKTKKPVPGTNHARRKAKRGHPEK

Repeat found in LOC103400202
Repeat occurs 12 times in a sequence of 652 amino acids
Location between 6975777 and 6988171
Coverage of 16.56 %
Instances:
VNELEQKLQ | VNELEKELQ | VNEAEKKID | VNELEKELQ | VNELEKELQ
VNEAEKKMD | VNELEKELQ | VNEVEKMDD | VNELEKELQ | VNEAEKKID
VNELEKELQ | VNEAEKKMD |
pattern: VNE[LVA]E[KQ][KEM][LDIM][DQ]
MAPSKLAILSIFLALIFSQIRADNPARLPVRGPGASPSDGPHQKIKPPRDGRHLSVGGLFAKK
GQKKNGQRNGVSPEEREKVIQGLTEEGDQIIQELREEGGKVIQEMLDSIIQEMSGSISSLPTEI
KFLQKNGSLVEQQVRKAHARADELEKKVNELEQKLQSQRKEKEELESRTNEAEEKIDDLLSEIE
NIGKTNDEQETKIRKTEHALEVKVAEVEMWKAKFEATLKAKVLNEVNELEKELQSQRNEKGDLK
DRVNEAEKKIDDLLSKIENVNELEKELQSQRNEKGDLKDRANEAEKKMDDLLSKLENVNELEKE
LQSQRNEKRDLKDRVNEAEKKMDDLLSKIENVNELEKELQMQRNEKGDLKDQVNEVEKMDDLLS
KIENVNELEKELQLQRNEKRDLKDRVNEAEKKIDDLFSKIENVNELEKELQSQRNEKGDLKDRV
NEAEKKMDDLLSKIENALEKKAQAEKWAEPHVETTKTKSIPAIKEQWVVVKDTVELHVISLSNK
SIEVYEVSKTTLAPHVIKAQEVVDIYFQEAKKFSKPYVDQLTTVTKPHVDKAVIAYEKFLKPAS
TYHHQVQGTVKDLLKRHELTRPLATKELEWFAASALVALLIIIQFRIFSSLFCTKTKKPVPGTN
HARRKAKRGHPEK

### Similar gene clusters

### NC_091675 - Cluster 56 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_091675 - Gene Cluster 56. Type = cyclopeptide. Location: 7326905 - 7564559 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NC_091675 - Cluster 57 - Polyketide

### Gene cluster description

Download cluster GenBank file
NC_091675 - Gene Cluster 57. Type = polyketide. Location: 8441713 - 8624784 nt. Click on genes for more information.
Show pHMM detection rules used
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091675 - Cluster 58 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_091675 - Gene Cluster 58. Type = cyclopeptide. Location: 17480162 - 17888426 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC103400914
Repeat occurs 4 times in a sequence of 237 amino acids
Location between 17819798 and 17820512
Coverage of 20.25 %
Instances:
SELPRSHQSMSE | SELQAESQSMSE | SELQAESQSMSE | SELQAESRSPSV |
pattern: SEL[QP][RA][SE][SH][RQ]S[PM]S[EV]
MVKQTIGKPSERNDIKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDAPEKAARAFDAALFCL
RGHTAKFNFPDNPPEISGGRSLSAAQIQTEAARFANSELPRSHQSMSEFQAESQSMSELQAESQ
SMSELQAESQSMSELQAESRSPSVSEGSGTVFVESEFLVTPNDSFSDPFSTFGSGNYATEYGLF
AGFDEMNYQFFSPAAAVPTPVVDYYAEENLDGQFFSPAQESFLWNF

### Similar gene clusters

### Similar known gene clusters

### NC_091675 - Cluster 59 - Putative

### Gene cluster description

Download cluster GenBank file
NC_091675 - Gene Cluster 59. Type = putative. Location: 21284166 - 21517313 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091676 - Cluster 60 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_091676 - Gene Cluster 60. Type = cyclopeptide. Location: 6163497 - 6489505 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC103402999
Repeat occurs 6 times in a sequence of 182 amino acids
Location between 6177441 and 6178816
Coverage of 23.08 %
Instances:
RRRSPSP | RRRRSPS | RRRSPSY | RRRRSPP | RRRSPPR
RRRSVTP |
pattern: RRR[SR][SPV][SPT][SYPR]
MTRVYVGNLDPRVNERDLEDEFRLFGVLRNVWVARRPPGYAFIEFDDRRDALDAVQALDGKNG
WRVELSHNSKGSGGRGGGRGRGGGDDLKCYECGEPGHFARECRMRVGSRGGSGGRRRSPSPRRR
RSPSYDGYGRRSYSPRRRRSPPRRRSVTPPRRGRSYSRSPPYRHARRASPYVNGD

Repeat found in LOC103402999
Repeat occurs 6 times in a sequence of 181 amino acids
Location between 6177441 and 6178657
Coverage of 23.2 %
Instances:
RRRSPSP | RRRRSPS | RRRSPSY | RRRRSPP | RRRSPPR
RRRSVTP |
pattern: RRR[SR][SPV][SPT][SYPR]
MTRVYVGNLDPRVNERDLEDEFRLFGVLRNVWVARRPPGYAFIEFDDRRDALDAVQALDGKNG
WRVELSHNSKGSGGRGGGRGRGGGDDLKCYECGEPGHFARECRMRVGSRGGSGGRRRSPSPRRR
RSPSYDGYGRRSYSPRRRRSPPRRRSVTPPRRGRSYSRSPPYRHARRASPYVNG

Repeat found in LOC103404818
Repeat occurs 7 times in a sequence of 768 amino acids
Location between 6272663 and 6275627
Coverage of 5.47 %
Instances:
EKEREI | EKEQRR | EKEKQR | EKEREK | EKERER
EKEEDI | EKERSR |
pattern: EKE[RKQE][QERDS][RKI]
MIRTPFPPRPLGATGLLQRAPVPGIPGVRPIIPPVRPILPIVTPAEKPQTTVYVGKIAPTVDN
EFMKYLLQLCGPVKSWKRAQDPTDGTPRGFGFCEFESAEGVLRALRLLTKLSIDGQDLVLNVNQ
ATRDYLERVVQKKTENSKKLKEAEAAEKGDGSAPDGEKNVPSNPSVQDPKEEDSNSSNKENDTA
NFGIVTDEDKEADQEAMEKLTSLIEERIKNKPLPPPPTPAPGDATRNSNSTLPAKSRDGDSDVD
TMRNDACEEKIDEEITGDNKTSDQERPETSSPDRSRRQDRSRDRGRDMKREKEREIERYERETE
RERVRKEKEQRRKIEDAEHQYEKCLKDWEYREREKEKQRQYEKEREKERERKRKKEVIYEEDDE
DEDSRKKWRRSALEEKRKRRLREKEEDIADRQKEEEEIAEARKRAEEEKQLEQERDALRVSSGH
VPNGSDTVALAEEFGVELKDKAIEQDVEGYSGPENRIGDGALQNGNSGDKSTMTSASASEPHLS
GSAPAKKLGFGLMGSGKRTAVPSVFKEEDDDAHKDKKMRPLVPIDYSTEELQAVQQTVFGTAPS
NLAAAAEFAKRISNASSKEEKPDAEKERSRRSDDRSSHRDRDRHGDDSNRTRNEHKEKTIDRDT
DREHGMSKPRATDNKKLLDAKQLIDMIPKTKEELFSYEINWAIYEQHALHERMRPWISKKITEF
LGEEETTLVDYIVSSTQEHVGAERMLQLLQSILDEEAEMFVLKMWRMLIFEIKKVETGLASRTR
T

Repeat found in LOC103404818
Repeat occurs 7 times in a sequence of 768 amino acids
Location between 6272663 and 6275627
Coverage of 5.47 %
Instances:
EKEREI | EKEQRR | EKEKQR | EKEREK | EKERER
EKEEDI | EKERSR |
pattern: EKE[RKQE][QERDS][RKI]
MIRTPFPPRPLGATGLLQRAPVPGIPGVRPIIPPVRPILPIVTPAEKPQTTVYVGKIAPTVDN
EFMKYLLQLCGPVKSWKRAQDPTDGTPRGFGFCEFESAEGVLRALRLLTKLSIDGQDLVLNVNQ
ATRDYLERVVQKKTENSKKLKEAEAAEKGDGSAPDGEKNVPSNPSVQDPKEEDSNSSNKENDTA
NFGIVTDEDKEADQEAMEKLTSLIEERIKNKPLPPPPTPAPGDATRNSNSTLPAKSRDGDSDVD
TMRNDACEEKIDEEITGDNKTSDQERPETSSPDRSRRQDRSRDRGRDMKREKEREIERYERETE
RERVRKEKEQRRKIEDAEHQYEKCLKDWEYREREKEKQRQYEKEREKERERKRKKEVIYEEDDE
DEDSRKKWRRSALEEKRKRRLREKEEDIADRQKEEEEIAEARKRAEEEKQLEQERDALRVSSGH
VPNGSDTVALAEEFGVELKDKAIEQDVEGYSGPENRIGDGALQNGNSGDKSTMTSASASEPHLS
GSAPAKKLGFGLMGSGKRTAVPSVFKEEDDDAHKDKKMRPLVPIDYSTEELQAVQQTVFGTAPS
NLAAAAEFAKRISNASSKEEKPDAEKERSRRSDDRSSHRDRDRHGDDSNRTRNEHKEKTIDRDT
DREHGMSKPRATDNKKLLDAKQLIDMIPKTKEELFSYEINWAIYEQHALHERMRPWISKKITEF
LGEEETTLVDYIVSSTQEHVGAERMLQLLQSILDEEAEMFVLKMWRMLIFEIKKVETGLASRTR
T

Repeat found in LOC103404818
Repeat occurs 7 times in a sequence of 768 amino acids
Location between 6272663 and 6275627
Coverage of 5.47 %
Instances:
EKEREI | EKEQRR | EKEKQR | EKEREK | EKERER
EKEEDI | EKERSR |
pattern: EKE[RKQE][QERDS][RKI]
MIRTPFPPRPLGATGLLQRAPVPGIPGVRPIIPPVRPILPIVTPAEKPQTTVYVGKIAPTVDN
EFMKYLLQLCGPVKSWKRAQDPTDGTPRGFGFCEFESAEGVLRALRLLTKLSIDGQDLVLNVNQ
ATRDYLERVVQKKTENSKKLKEAEAAEKGDGSAPDGEKNVPSNPSVQDPKEEDSNSSNKENDTA
NFGIVTDEDKEADQEAMEKLTSLIEERIKNKPLPPPPTPAPGDATRNSNSTLPAKSRDGDSDVD
TMRNDACEEKIDEEITGDNKTSDQERPETSSPDRSRRQDRSRDRGRDMKREKEREIERYERETE
RERVRKEKEQRRKIEDAEHQYEKCLKDWEYREREKEKQRQYEKEREKERERKRKKEVIYEEDDE
DEDSRKKWRRSALEEKRKRRLREKEEDIADRQKEEEEIAEARKRAEEEKQLEQERDALRVSSGH
VPNGSDTVALAEEFGVELKDKAIEQDVEGYSGPENRIGDGALQNGNSGDKSTMTSASASEPHLS
GSAPAKKLGFGLMGSGKRTAVPSVFKEEDDDAHKDKKMRPLVPIDYSTEELQAVQQTVFGTAPS
NLAAAAEFAKRISNASSKEEKPDAEKERSRRSDDRSSHRDRDRHGDDSNRTRNEHKEKTIDRDT
DREHGMSKPRATDNKKLLDAKQLIDMIPKTKEELFSYEINWAIYEQHALHERMRPWISKKITEF
LGEEETTLVDYIVSSTQEHVGAERMLQLLQSILDEEAEMFVLKMWRMLIFEIKKVETGLASRTR
T

Repeat found in LOC103404818
Repeat occurs 7 times in a sequence of 768 amino acids
Location between 6272663 and 6275627
Coverage of 5.47 %
Instances:
EKEREI | EKEQRR | EKEKQR | EKEREK | EKERER
EKEEDI | EKERSR |
pattern: EKE[RKQE][QERDS][RKI]
MIRTPFPPRPLGATGLLQRAPVPGIPGVRPIIPPVRPILPIVTPAEKPQTTVYVGKIAPTVDN
EFMKYLLQLCGPVKSWKRAQDPTDGTPRGFGFCEFESAEGVLRALRLLTKLSIDGQDLVLNVNQ
ATRDYLERVVQKKTENSKKLKEAEAAEKGDGSAPDGEKNVPSNPSVQDPKEEDSNSSNKENDTA
NFGIVTDEDKEADQEAMEKLTSLIEERIKNKPLPPPPTPAPGDATRNSNSTLPAKSRDGDSDVD
TMRNDACEEKIDEEITGDNKTSDQERPETSSPDRSRRQDRSRDRGRDMKREKEREIERYERETE
RERVRKEKEQRRKIEDAEHQYEKCLKDWEYREREKEKQRQYEKEREKERERKRKKEVIYEEDDE
DEDSRKKWRRSALEEKRKRRLREKEEDIADRQKEEEEIAEARKRAEEEKQLEQERDALRVSSGH
VPNGSDTVALAEEFGVELKDKAIEQDVEGYSGPENRIGDGALQNGNSGDKSTMTSASASEPHLS
GSAPAKKLGFGLMGSGKRTAVPSVFKEEDDDAHKDKKMRPLVPIDYSTEELQAVQQTVFGTAPS
NLAAAAEFAKRISNASSKEEKPDAEKERSRRSDDRSSHRDRDRHGDDSNRTRNEHKEKTIDRDT
DREHGMSKPRATDNKKLLDAKQLIDMIPKTKEELFSYEINWAIYEQHALHERMRPWISKKITEF
LGEEETTLVDYIVSSTQEHVGAERMLQLLQSILDEEAEMFVLKMWRMLIFEIKKVETGLASRTR
T

Repeat found in LOC103404818
Repeat occurs 7 times in a sequence of 768 amino acids
Location between 6272663 and 6275627
Coverage of 5.47 %
Instances:
EKEREI | EKEQRR | EKEKQR | EKEREK | EKERER
EKEEDI | EKERSR |
pattern: EKE[RKQE][QERDS][RKI]
MIRTPFPPRPLGATGLLQRAPVPGIPGVRPIIPPVRPILPIVTPAEKPQTTVYVGKIAPTVDN
EFMKYLLQLCGPVKSWKRAQDPTDGTPRGFGFCEFESAEGVLRALRLLTKLSIDGQDLVLNVNQ
ATRDYLERVVQKKTENSKKLKEAEAAEKGDGSAPDGEKNVPSNPSVQDPKEEDSNSSNKENDTA
NFGIVTDEDKEADQEAMEKLTSLIEERIKNKPLPPPPTPAPGDATRNSNSTLPAKSRDGDSDVD
TMRNDACEEKIDEEITGDNKTSDQERPETSSPDRSRRQDRSRDRGRDMKREKEREIERYERETE
RERVRKEKEQRRKIEDAEHQYEKCLKDWEYREREKEKQRQYEKEREKERERKRKKEVIYEEDDE
DEDSRKKWRRSALEEKRKRRLREKEEDIADRQKEEEEIAEARKRAEEEKQLEQERDALRVSSGH
VPNGSDTVALAEEFGVELKDKAIEQDVEGYSGPENRIGDGALQNGNSGDKSTMTSASASEPHLS
GSAPAKKLGFGLMGSGKRTAVPSVFKEEDDDAHKDKKMRPLVPIDYSTEELQAVQQTVFGTAPS
NLAAAAEFAKRISNASSKEEKPDAEKERSRRSDDRSSHRDRDRHGDDSNRTRNEHKEKTIDRDT
DREHGMSKPRATDNKKLLDAKQLIDMIPKTKEELFSYEINWAIYEQHALHERMRPWISKKITEF
LGEEETTLVDYIVSSTQEHVGAERMLQLLQSILDEEAEMFVLKMWRMLIFEIKKVETGLASRTR
T

Repeat found in LOC103403011
Repeat occurs 4 times in a sequence of 636 amino acids
Location between 6325466 and 6327535
Coverage of 6.29 %
Instances:
FTGYSENANA | FTGYGTSANV | FTGYGQSGNG | FTGYGQGAKG |
pattern: FTGY[SG][EQT][SGN][GA][KN][GVA]
MQQHTQLSLVTPLSLFFIFFSSLNVALAANGGSSGAAENPFSPKAYLVRYWSKEVRNDAEKPS
FLLSKASPLNAVDSAAFAKLAAQNGLSTRLPEFCSAANLLCFPDLAPSLEKHDKNANFAVYTDK
NFTNYGTDRLAGVDSFKNYSIGENLPVDSFRRYSRDSVNHKDQFTSYANDGNVVDQSFNSYAGG
STGGAGDFKKYADSVNVPHLGFNSYSDDSNGRSHGFTGYSENANAGDQSFSSYSKNANGAPNEF
TGYGTSANVVGSGFTGYGQSGNGANDKFNNYGNDQNNPTNNFRSYGDGGNAGVETFTSYRDSAN
VGEDSFQSYAKNSNGQKMDFTNYGKSFNVGSDKFTGYGQGAKGQEIGFKIYGANTTFKDYAKKE
TVSFKSYTKAGAGSEKVAATMAAASGSLVKKWVEPGKFFRESMLKKGVVMPMPDIQDKTPKRSF
LPRTILSKLPFATSKIAALKQIFHAADNSTMEKIIVDALQECERAPSAGETKRCVGSAEDMIDF
ATTVLGRNVVVRSTENVNGAKHDVMIGSVKGINGGKVTQSVSCHQSMFPYLLYYCHSVPKVRVY
EADLLDPVSKAKINHGVAICHLDTSAWSPTHGSFMALGSGPGRIEVCHWIFQNDMTWTIAD

### Similar gene clusters

### NC_091676 - Cluster 61 - Transporter_associated

### Gene cluster description

Download cluster GenBank file
NC_091676 - Gene Cluster 61. Type = transporter_associated. Location: 7529164 - 7649318 nt. Click on genes for more information.
Show pHMM detection rules used
plants/transporter_associated: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[MatE/LTP_2/ABC2_membrane/ABC_tran]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091676 - Cluster 62 - Polyketide

### Gene cluster description

Download cluster GenBank file
NC_091676 - Gene Cluster 62. Type = polyketide. Location: 12829472 - 12983875 nt. Click on genes for more information.
Show pHMM detection rules used
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091677 - Cluster 63 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_091677 - Gene Cluster 63. Type = saccharide. Location: 8285327 - 8411750 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091677 - Cluster 64 - Saccharide-transporter_associated

### Gene cluster description

Download cluster GenBank file
NC_091677 - Gene Cluster 64. Type = saccharide-transporter_associated. Location: 11013443 - 11685514 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))
plants/transporter_associated: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[MatE/LTP_2/ABC2_membrane/ABC_tran]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### Similar known gene clusters

### NC_091677 - Cluster 65 - Transporter_associated

### Gene cluster description

Download cluster GenBank file
NC_091677 - Gene Cluster 65. Type = transporter_associated. Location: 24202328 - 24620869 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/transporter_associated: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[MatE/LTP_2/ABC2_membrane/ABC_tran]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091677 - Cluster 66 - Terpene

### Gene cluster description

Download cluster GenBank file
NC_091677 - Gene Cluster 66. Type = terpene. Location: 29829850 - 29952762 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_091677 - Cluster 67 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_091677 - Gene Cluster 67. Type = saccharide. Location: 33404994 - 33483320 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters