NC_065570.1 - 65 clusters - antiSMASH results

Plant Specialized Metabolite Analysis
Version 2.0

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### Identified secondary metabolite clusters

Cluster | Type | From | To | Size (kb) | Core domains | Product/substrate predicted by subgroup | Most similar known cluster | MIBiG BGC-ID
--- | --- | --- | --- | --- | --- | --- | --- | ---
The following clusters are from record NC_065570.1:
Cluster 1 | Fatty_acid-Saccharide | 52090117 | 52321453 | 231.34 | DIOX_N, ECH_2, LTP_2, Transferase, UDPGT_2 | cyanogenic glucoside-2, monoterpenoid-2 | - | -
Cluster 2 | Cyclopeptide | 52730742 | 53073629 | 342.89 | BURP | - | - | -
Cluster 3 | Saccharide | 58304663 | 58394897 | 90.23 | Aminotran_1_2, Glycos_transf_2, SE | - | - | -
Cluster 4 | Fatty_acid-Terpene | 67303962 | 67412102 | 108.14 | 2OG-FeII_Oxy, DIOX_N, FA_desaturase, Terpene_synth, Terpene_synth_C, Transferase, p450 | - | - | -
Cluster 5 | Cyclopeptide | 70120155 | 70376857 | 256.70 | ADH_N, ADH_zinc_N, BURP, FA_desaturase_2, Peptidase_S10, p450 | - | - | -
Cluster 6 | Fatty_acid | 70280586 | 70402715 | 122.13 | ADH_N, ADH_zinc_N, FA_desaturase_2, Peptidase_S10, p450 | - | - | -
Cluster 7 | Putative | 70721677 | 70813441 | 91.76 | Abhydrolase_3, Dimerisation, Epimerase, Methyltransf_11, Methyltransf_2 | - | - | -
Cluster 8 | Fatty_acid-Saccharide | 73161797 | 73186519 | 24.72 | AMP-binding, Glycos_transf_2, Transferase | - | - | -
The following clusters are from record NC_065571.1:
Cluster 9 | Alkaloid | 979553 | 1039660 | 60.11 | Bet_v_1, Transferase | - | - | -
Cluster 10 | Polyketide-Saccharide | 2216220 | 2300161 | 83.94 | Cellulose_synt, Chal_sti_synt_C, Chal_sti_synt_N, SE | - | - | -
Cluster 11 | Cyclopeptide | 7191788 | 7576760 | 384.97 | BURP | - | - | -
Cluster 12 | Cyclopeptide | 9068057 | 9587077 | 519.02 | BURP | - | - | -
Cluster 13 | Cyclopeptide | 9222310 | 9694710 | 472.40 | BURP | - | - | -
Cluster 14 | Terpene-Saccharide | 10479172 | 10758654 | 279.48 | Glyco_hydro_1, Terpene_synth, Terpene_synth_C, p450 | - | - | -
Cluster 15 | Alkaloid | 11830958 | 12002352 | 171.39 | Amino_oxidase, Bet_v_1, Methyltransf_11 | - | - | -
Cluster 16 | Cyclopeptide | 15540148 | 16650673 | 1110.53 | BURP | - | - | -
Cluster 17 | Terpene-Saccharide | 43899303 | 44040042 | 140.74 | Glycos_transf_1, Prenyltrans, SQHop_cyclase_C, SQHop_cyclase_N, p450 | Cycloartenol | tirucalla (21% of genes show similarity) | BGC0001314.3_c1
Cluster 18 | Terpene | 47337490 | 47463827 | 126.34 | Epimerase, Terpene_synth_C, Transferase, p450 | - | - | -
Cluster 19 | Saccharide | 49179910 | 49258369 | 78.46 | Glycos_transf_2, UDPGT_2, p450 | - | - | -
Cluster 20 | Cyclopeptide | 50243949 | 50595412 | 351.46 | BURP | - | arabidiol/baruol (13% of genes show similarity) | BGC0002906.1_c1
The following clusters are from record NC_065572.1:
Cluster 21 | Alkaloid-Fatty_acid | 56679285 | 57201527 | 522.24 | BBE, FAD_binding_4, FA_hydroxylase | - | - | -
Cluster 22 | Cyclopeptide | 67377211 | 67901756 | 524.54 | BURP | - | - | -
Cluster 23 | Transporter_associated | 68918310 | 69103722 | 185.41 | LTP_2, p450 | - | - | -
Cluster 24 | Putative | 69440849 | 69517459 | 76.61 | Transferase, adh_short | - | - | -
Cluster 25 | Terpene | 72707016 | 72741688 | 34.67 | Terpene_synth, Terpene_synth_C, p450 | - | casbene/5a-hydroxy-casbene/5-keto-casbene/5-keto-7,8-epoxy... (47% of genes show similarity) | BGC0002393.2_c1
Cluster 26 | Cyclopeptide | 74105832 | 74355763 | 249.93 | BURP | - | - | -
The following clusters are from record NC_065573.1:
Cluster 27 | Saccharide | 24992953 | 25073607 | 80.65 | 2OG-FeII_Oxy, DIOX_N, Dimerisation, Methyltransf_2, UDPGT_2, p450 | flavonoid, oleananes | - | -
Cluster 28 | Alkaloid | 28744281 | 28804595 | 60.31 | AMP-binding, Str_synth | - | - | -
Cluster 29 | Lignan | 30500575 | 30555365 | 54.79 | Dirigent, Methyltransf_11, p450 | - | - | -
Cluster 30 | Putative | 30658407 | 30765798 | 107.39 | 2OG-FeII_Oxy, DIOX_N, Methyltransf_7, Transferase, p450 | - | - | -
Cluster 31 | Terpene | 31287148 | 31313680 | 26.53 | Aldo_ket_red, Amino_oxidase, PRISE | - | - | -
Cluster 32 | Saccharide | 36288981 | 36376326 | 87.34 | AMP-binding, Amino_oxidase, Glyco_hydro_1, Glycos_transf_1, SQS_PSY | - | - | -
Cluster 33 | Alkaloid | 37732371 | 37804408 | 72.04 | Cu_amine_oxid, Epimerase, LTP_2, p450 | - | - | -
The following clusters are from record NC_065574.1:
Cluster 34 | Cyclopeptide | 5458438 | 5751141 | 292.70 | BURP | - | - | -
Cluster 35 | Terpene | 7425348 | 7552412 | 127.06 | ABC2_membrane, ABC_tran, Aminotran_3, SQHop_cyclase_C, SQHop_cyclase_N, p450 | triterpene-4 | lupeol (11% of genes show similarity) | BGC0001317.3_c1
Cluster 36 | Putative | 9114021 | 9261441 | 147.42 | 2OG-FeII_Oxy, Aminotran_1_2, DIOX_N | - | - | -
Cluster 37 | Phenolamide | 10582128 | 10714408 | 132.28 | Acetyltransf_1, MatE, Orn_Arg_deC_N, Orn_DAP_Arg_deC, Transferase, p450 | - | - | -
Cluster 38 | Saccharide | 12097609 | 12194545 | 96.94 | 2OG-FeII_Oxy, DIOX_N, Lycopene_cycl, UDPGT_2 | - | - | -
Cluster 39 | Saccharide | 16192099 | 16374525 | 182.43 | 2OG-FeII_Oxy, DIOX_N, Glyco_hydro_1 | - | - | -
Cluster 40 | Terpene | 42495912 | 42910700 | 414.79 | 2OG-FeII_Oxy, DIOX_N, SQHop_cyclase_C, SQHop_cyclase_N, Terpene_synth, Terpene_synth_C, Transferase, p450 | triterpene-3 | - | -
Cluster 41 | Terpene-Saccharide | 43032297 | 43211187 | 178.89 | Glycos_transf_1, SQHop_cyclase_C, SQHop_cyclase_N, Terpene_synth, Terpene_synth_C | triterpene | - | -
Cluster 42 | Cyclopeptide | 46934471 | 47954665 | 1020.19 | BURP | - | - | -
The following clusters are from record NC_065575.1:
Cluster 43 | Terpene-Saccharide | 352926 | 405572 | 52.65 | PRISE, Prenyltransf, UDPGT_2 | - | - | -
Cluster 44 | Cyclopeptide | 2353151 | 2991554 | 638.40 | BURP | - | - | -
Cluster 45 | Cyclopeptide | 3517580 | 3869861 | 352.28 | BURP | - | - | -
Cluster 46 | Terpene | 41968358 | 42042011 | 73.65 | Acetyltransf_1, Chalcone_3, Terpene_synth, Terpene_synth_C | - | - | -
Cluster 47 | Alkaloid | 43665389 | 43727572 | 62.18 | Abhydrolase_3, Acetyltransf_1, Bet_v_1 | - | - | -
Cluster 48 | Putative | 45515112 | 45604188 | 89.08 | 2OG-FeII_Oxy, Abhydrolase_3, DIOX_N, p450 | - | - | -
The following clusters are from record NC_065576.1:
Cluster 49 | Terpene | 13164559 | 13269223 | 104.66 | 2OG-FeII_Oxy, AMP-binding, DIOX_N, Terpene_synth, Terpene_synth_C | - | - | -
Cluster 50 | Cyclopeptide | 31282959 | 32886544 | 1603.59 | BURP | - | - | -
Cluster 51 | Alkaloid | 40007036 | 40125374 | 118.34 | Epimerase, Pyridoxal_deC, p450 | - | - | -
Cluster 52 | Fatty_acid-Saccharide | 46240995 | 46343953 | 102.96 | ADH_N_2, ADH_zinc_N, FA_desaturase_2, Glyco_hydro_1 | - | - | -
Cluster 53 | Lignan | 46745137 | 46858876 | 113.74 | Dirigent, Peptidase_S10, p450 | - | - | -
Cluster 54 | Putative | 48173166 | 48370665 | 197.50 | Abhydrolase_3, Transferase, p450 | - | - | -
Cluster 55 | Cyclopeptide | 49407702 | 49952896 | 545.19 | BURP | - | - | -
The following clusters are from record NC_065577.1:
Cluster 56 | Saccharide | 723452 | 819406 | 95.95 | Methyltransf_3, UDPGT_2 | flavonoid-3, oleananes-3 | - | -
Cluster 57 | Saccharide | 1122141 | 1160798 | 38.66 | ADH_N, ADH_zinc_N, UDPGT_2 | hydroxycinnamate | - | -
Cluster 58 | Cyclopeptide | 1830435 | 2508685 | 678.25 | BURP | - | - | -
Cluster 59 | Cyclopeptide | 6779788 | 7067514 | 287.73 | BURP | - | - | -
Cluster 60 | Terpene-Saccharide | 8520191 | 8651367 | 131.18 | Glyco_hydro_1, Terpene_synth, Terpene_synth_C, adh_short, p450 | - | - | -
Cluster 61 | Cyclopeptide | 8828642 | 9523848 | 695.21 | BURP | - | - | -
Cluster 62 | Cyclopeptide | 17864569 | 20822019 | 2957.45 | BURP | - | - | -
Cluster 63 | Cyclopeptide | 29769063 | 31083110 | 1314.05 | BURP | - | - | -
Cluster 64 | Putative | 33840507 | 34121947 | 281.44 | Amino_oxidase, Methyltransf_7, Peptidase_S10, Transferase | - | - | -
Cluster 65 | Putative | 36260285 | 36515762 | 255.48 | Chalcone, Transferase, p450 | - | - | -

### NC_065570 - Cluster 1 - Fatty_acid-saccharide

### Gene cluster description

Download cluster GenBank file
NC_065570 - Gene Cluster 1. Type = fatty_acid-saccharide. Location: 52090117 - 52321453 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065570 - Cluster 2 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_065570 - Gene Cluster 2. Type = cyclopeptide. Location: 52730742 - 53073629 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC126664311
Repeat occurs 4 times in a sequence of 506 amino acids
Location between 53034629 and 53037850
Coverage of 4.74 %
Instances:
KEEKVD | KEEHVE | KEEKVD | KEEHVK |
pattern: KEE[HK]V[DKE]
MATASLDEATAKEVLRQVEFYFSDSNLPRDNFMRNTITQSEDGMVDLSLICSFKKMRGYLKLV
DAKPEEVPDETLKAVAETLRRSSSLKISDDGKKVGRIAALVKPEEAIEQLDIKTIAASPLEYNA
KMEDVESFFGQYGKVSSVRMPRHVADKRAICGSALVEFANQEDAENILKQSLVFAGVQLELKPK
KEFDAERARQEEKFKNSHAVSGSNNKNNPETDYPKGLIVAFSLKAISTEASVEQGGAQELVRVD
ANASKSDGESTPAENTGQENEQKLSDNISAAKENHEMSVEEGKEEKVDEENGSESTGMETEGKS
SEGPIEKDKEKEEHVEVGKEEKVDGENGSESKGMETGKKSSEGANGKNKEKEEHVKADAYKNNM
NVVMREDLKAVFEKFGTVKFIDFKIGEESGYIRFEQPESAQKARAAAVLTKDGGLAVKNFIATL
EPVTGEAEKEYWSLLRGNQEKHRGNSSNRGRGGRHFRGGKHSRSRDFNSGGRPNKSQKV

### Similar gene clusters

### NC_065570 - Cluster 3 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_065570 - Gene Cluster 3. Type = saccharide. Location: 58304663 - 58394897 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065570 - Cluster 4 - Fatty_acid-terpene

### Gene cluster description

Download cluster GenBank file
NC_065570 - Gene Cluster 4. Type = fatty_acid-terpene. Location: 67303962 - 67412102 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065570 - Cluster 5 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_065570 - Gene Cluster 5. Type = cyclopeptide. Location: 70120155 - 70376857 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NC_065570 - Cluster 6 - Fatty_acid

### Gene cluster description

Download cluster GenBank file
NC_065570 - Gene Cluster 6. Type = fatty_acid. Location: 70280586 - 70402715 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065570 - Cluster 7 - Putative

### Gene cluster description

Download cluster GenBank file
NC_065570 - Gene Cluster 7. Type = putative. Location: 70721677 - 70813441 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065570 - Cluster 8 - Fatty_acid-saccharide

### Gene cluster description

Download cluster GenBank file
NC_065570 - Gene Cluster 8. Type = fatty_acid-saccharide. Location: 73161797 - 73186519 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065571 - Cluster 9 - Alkaloid

### Gene cluster description

Download cluster GenBank file
NC_065571 - Gene Cluster 9. Type = alkaloid. Location: 979553 - 1039660 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065571 - Cluster 10 - Polyketide-saccharide

### Gene cluster description

Download cluster GenBank file
NC_065571 - Gene Cluster 10. Type = polyketide-saccharide. Location: 2216220 - 2300161 nt. Click on genes for more information.
Show pHMM detection rules used
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065571 - Cluster 11 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_065571 - Gene Cluster 11. Type = cyclopeptide. Location: 7191788 - 7576760 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC126666875
Repeat occurs 26 times in a sequence of 670 amino acids
Location between 7382887 and 7385660
Coverage of 58.21 %
Instances:
YVYSEPSKSESYVYR | YVYRHPSKPSDGYVY | YVYSQSSKPTEEGYV | YVYSQSTKPTEGYVY | YVYGQSSKPTEGYVY
YVYGQSSKPSEDYVY | YVYSQSSKPTEGYVY | YVYGQSSKPTEGYVY | YVYGQSSKPSEGYVY | YVYSQSSKPTEDYVY
YVYGQSSKPTEGYVY | YVYGQSSKPTEGYIY | YVYSQSSKPTEGYVY | YVYGQSSKPTEGYVY | YVYSQSSKPSEGYVY
YVYSQSSKPSEGYVY | YVYSQSSKLSKPSEG | YVYSQSSKPTEGYVY | YVYSQSSEPKEGYVY | YVYRQSFKPTESYVY
YVYSQSSKPSEGYVY | YVYSQSLKSNQEPSR | YVYNQPSKSIKGYVY | YVYSQASKSNQGYVY | YVYSQSSSHGYVYSQ
YVYSQPSKKKHGETI |
pattern: YVY[RSNG][HEQ][PAS][FSTL][KES][PKHLS][GITKSNE][DQKHYSE][GPDVYSE][GPVYSE][ITVYSE][RQGIVY]
MVSMEFHLLPIFVLLCVMFVRSNASVPAEVYWHSKLPNTAMPQKLHNLLYCDLGEKFPFWDMG
AKPSQRYVNQDRGLKSYTYSQPFRTKENYVYSEPSKSESYVYRHPSKPSDGYVYSQSSKPTEEG
YVYSQSTKPTEGYVYGQSSKPTEGYVYGQSSKPSEDYVYSQSSKPTEGYVYGQSSKPTEGYVYG
QSSKPSEGYVYSQSSKPTEDYVYGQSSKPTEGYVYGQSSKPTEGYIYGQSSKPSEGYVYSQSSK
PTEGYVYGQSSKPTEGYVYSQSSKPSEGYVYSQSSKPSEGYVYSQSSKLSKPSEGYVYSQSSKP
TEGYVYSQSSEPKEGYVYRQSFKPTESYVYSQSSKPSEGYVYSQSLKSNQEPSRAYNSRPLKTT
EGYVYNQPSKSIKGYVYSQASKSNQGYVYSQSSSHGYVYSQPSKKKHGETIDHSAIFFFLHSDL
HEGKTMRFEITESTNKARIIPRQVSESIPFSAEKLPEIFMKFSTSADSPQGEMIEKTVKDCGFP
GIKGEDKLCTTSLESLIDFVVAHIGNNAQVFYNEMDEVKTTEQEYSIMGVNMIGEDPVVCHKQK
YPYAVYYCHEIKDTKVYKAPLMGADGTKVEAIVVCHFDTSNWNPGNIAFLLLNVKPGQETICHV
IKSDTLVWLPTDQVMMGDRDRSEINHLSTTA

### Similar gene clusters

### NC_065571 - Cluster 12 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_065571 - Gene Cluster 12. Type = cyclopeptide. Location: 9068057 - 9587077 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC126669360
Repeat occurs 3 times in a sequence of 369 amino acids
Location between 9161985 and 9163181
Coverage of 5.69 %
Instances:
VASKGKH | VASKGKQ | VASMPLE |
pattern: VAS[KM][GP][KL][HEQ]
MSEANLGSNPDASAIVPVKRKRGRPRKYPKLDRGVYFHGPRSLNPDHGGSRVPPGFLGVSENQ
PRQVDPVNDATGVMVGQTVHGVIEAAFDAGYLLTVRVSNSETTLRGVIFKPGHYIPVSTDNDVA
PGVHMIRRNEVPFPRESYAQVHSHNSRSRERNGAIHTARVSNSVASKGKHVPSMATDVFSPANS
RGNVVPVVLQPINISNGVAGESSSVVTQPDHAVASKGKQEPDDSRPLNGSTTTNQFHSQNNNQV
TPSSIPSLAGSAQSLQEAEAKSMKLAGMPFEQLLAEVSKRNQVPAQSTETDTSSAGKLSTDDVN
DVDQALSVEPLQAVQPDLNNHSAVASMPLENYRTGRMTELLQKVLQEKIN

Repeat found in LOC126669360
Repeat occurs 3 times in a sequence of 369 amino acids
Location between 9161985 and 9163181
Coverage of 5.69 %
Instances:
VASKGKH | VASKGKQ | VASMPLE |
pattern: VAS[KM][GP][KL][HEQ]
MSEANLGSNPDASAIVPVKRKRGRPRKYPKLDRGVYFHGPRSLNPDHGGSRVPPGFLGVSENQ
PRQVDPVNDATGVMVGQTVHGVIEAAFDAGYLLTVRVSNSETTLRGVIFKPGHYIPVSTDNDVA
PGVHMIRRNEVPFPRESYAQVHSHNSRSRERNGAIHTARVSNSVASKGKHVPSMATDVFSPANS
RGNVVPVVLQPINISNGVAGESSSVVTQPDHAVASKGKQEPDDSRPLNGSTTTNQFHSQNNNQV
TPSSIPSLAGSAQSLQEAEAKSMKLAGMPFEQLLAEVSKRNQVPAQSTETDTSSAGKLSTDDVN
DVDQALSVEPLQAVQPDLNNHSAVASMPLENYRTGRMTELLQKVLQEKIN

Repeat found in LOC126669360
Repeat occurs 3 times in a sequence of 369 amino acids
Location between 9161985 and 9163181
Coverage of 5.69 %
Instances:
VASKGKH | VASKGKQ | VASMPLE |
pattern: VAS[KM][GP][KL][HEQ]
MSEANLGSNPDASAIVPVKRKRGRPRKYPKLDRGVYFHGPRSLNPDHGGSRVPPGFLGVSENQ
PRQVDPVNDATGVMVGQTVHGVIEAAFDAGYLLTVRVSNSETTLRGVIFKPGHYIPVSTDNDVA
PGVHMIRRNEVPFPRESYAQVHSHNSRSRERNGAIHTARVSNSVASKGKHVPSMATDVFSPANS
RGNVVPVVLQPINISNGVAGESSSVVTQPDHAVASKGKQEPDDSRPLNGSTTTNQFHSQNNNQV
TPSSIPSLAGSAQSLQEAEAKSMKLAGMPFEQLLAEVSKRNQVPAQSTETDTSSAGKLSTDDVN
DVDQALSVEPLQAVQPDLNNHSAVASMPLENYRTGRMTELLQKVLQEKIN

Repeat found in LOC126669360
Repeat occurs 3 times in a sequence of 368 amino acids
Location between 9161985 and 9163181
Coverage of 5.71 %
Instances:
VASKGKH | VASKGKQ | VASMPLE |
pattern: VAS[KM][GP][KL][HEQ]
MSEANLGSNPDASAIVPVKRKRGRPRKYPKLDRGVYFHGPRSLNPDHGGSRVPPGFLGVSENQ
PRQVDPVNDATGVMVGQTVHGVIEAAFDAGYLLTVRVSNSETTLRGVIFKPGHYIPVSTDNDVA
PGVHMIRRNEVPFPRESYAQVHSHNSRSRERNGAIHTARVSNSVASKGKHVPSMATDVFSPANS
RGNVVPVVLQPINISNGVAGESSSVVTQPDHAVASKGKQEPDDSRPLNGSTTTNQFHSQNNNQV
TPSSIPSLAGSAQSLQEAEAKSMKLAGMPFEQLLAEVSKRNQVPAQSTETDTSSAGKLSTDDVN
DVDQALSVEPLQAVQPDLNNHSAVASMPLENYRTGRMTELLQVLQEKIN

Repeat found in LOC126668814
Repeat occurs 8 times in a sequence of 604 amino acids
Location between 9164049 and 9170294
Coverage of 19.87 %
Instances:
ARPEVGISPFVARPE | ARPEVGISPFVARPE | ARPEVGISSFVARPE | ARPEVGISPFVARPE | ARPEVGISPFVARPE
ARPEVGIGPFVARPS | ARPSVTAKFNPYANL | ARPLLTPHHVQYPKH |
pattern: ARP[LES][LV][GT][PAI][GKHS][PFHS][FVN][PVQ][AY][RAP][PKN][HLES]
MYTHKNTQRLKMGLKSRREVESETCLSESLLFATMCLIGLPVDVHVRDGSVYSGIFHTASVDK
DYAIVLKEAKLAKKGKLVANVVNGSVIETLVIRSGDLVQVVAKEVLFPSDGVNGNVASDHVEAV
AVKVHCFESFDSEAKESNKYGVDKKKINDNRNSAKSKIISADGFVPRKAGKELDGRKVSHRSEI
ATKVELPKQDVVDVSKSFPDASVSGRQIVDERSQGEHDHHKQKFQLEREMNDDEVQSSSSISSL
CLSEAKASEEGQQTRKLLPNGVFCRNSPCSSISTVTSPRVEVTQESHSGALSTSAELVTPQSLE
STRTSKDFKLNPGAKIFCPSFATPISANTAAPAVSSMAYVPGNSPMVPAVAVSARPEVGISPFV
ARPEVGISPFVARPEVGISSFVARPEVGISPFVARPEVGISPFVARPEVGIGPFVARPSVTAKF
NPYANLTTVNGGHGPQFSQQVVAHMGNRTQQLRYAGQYHAVQAAPAYVPPNSQAVMIGRLGQVV
YMQPIPHDLVHSTASISPVSARPLLTPHHVQYPKHQGSAAGHASPICAPPPLMAGVQQPFAMPN
HIPLLQPHIPANCPIPVPGCNGFFATKFQ

### Similar gene clusters

### NC_065571 - Cluster 13 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_065571 - Gene Cluster 13. Type = cyclopeptide. Location: 9222310 - 9694710 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NC_065571 - Cluster 14 - Terpene-saccharide

### Gene cluster description

Download cluster GenBank file
NC_065571 - Gene Cluster 14. Type = terpene-saccharide. Location: 10479172 - 10758654 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065571 - Cluster 15 - Alkaloid

### Gene cluster description

Download cluster GenBank file
NC_065571 - Gene Cluster 15. Type = alkaloid. Location: 11830958 - 12002352 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065571 - Cluster 16 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_065571 - Gene Cluster 16. Type = cyclopeptide. Location: 15540148 - 16650673 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NC_065571 - Cluster 17 - Terpene-saccharide

### Gene cluster description

Download cluster GenBank file
NC_065571 - Gene Cluster 17. Type = terpene-saccharide. Location: 43899303 - 44040042 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### Similar known gene clusters

### NC_065571 - Cluster 18 - Terpene

### Gene cluster description

Download cluster GenBank file
NC_065571 - Gene Cluster 18. Type = terpene. Location: 47337490 - 47463827 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065571 - Cluster 19 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_065571 - Gene Cluster 19. Type = saccharide. Location: 49179910 - 49258369 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065571 - Cluster 20 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_065571 - Gene Cluster 20. Type = cyclopeptide. Location: 50243949 - 50595412 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC126669599
Repeat occurs 4 times in a sequence of 186 amino acids
Location between 50249452 and 50250013
Coverage of 30.11 %
Instances:
NPNPNPNPTPNPNN | NPNPNPTPNPNNRS | NPNPTPNPNNRSNR | NPNNRSNRAQPNRR |
pattern: NPN[PN][RTN][PS][TN][PR][ATN][PNQ][RPN][PSN][RN][RSN]
MGVAILNPQDCLQNPLSSRRGLISLPPEMKLYRNPNPNPNPTPNPNNRSNRAQPNRRKRSPNT
SPPARAAVVAKVEAEKIPVLGQVKILKRGEQLPKLSPAKAVSQPINIEKKKDVDLDLGSTHRLG
PDPDRVQTQICFRSTGFYAGSAFFTSPPPSSLPVPAFFTKKNNIDDATCDLRRMLGLSL

Repeat found in LOC126667990
Repeat occurs 8 times in a sequence of 517 amino acids
Location between 50417008 and 50422352
Coverage of 23.21 %
Instances:
EQEKSLLNDFQPKPN | EQEKALLNDFQPKPN | EQEKALLNDFQPKPN | EQEKALLNDFQPKPN | EQEKPLLNDFQPKPN
EQEKALLNDFQPKPN | EQEKALLNDFQPKPN | EQEKSFRSDGMDGNS |
pattern: EQEK[PAS][LF][RL][SN]D[GF][QM][PD][GK][PN][SN]
MSFFASMKFSLLSVFALLCLMLVVSNASMPNDNYLRSKVPNTPMPRKFGNRQQPAEIRGQDAF
WDMGFEERKIEYGSDGEQEKSLLNDFQPKPNLFPYFGYHNSRNDEQEKALLNDFQPKPNLFPYI
GYHNGRNDEQEKALLNDFQPKPNLFPYFGYHNGRNDEQEKALLNDFQPKPNLFPYFGYHNGRND
EQEKPLLNDFQPKPNLFPYFGYHNGRNDEQEKALLNDFQPKPNLFPYFGYHNGRNDEQEKALLN
DFQPKPNIFPYFGYRNGRNDEQEKSFRSDGMDGNSPFIVFFRRNDLKVNNKLPISLPPLNNDHS
AKDPPLLPREQAESYPFSSHKFPHILRLFSISPHSPQAKAMEEAITLCEGKSLTGETKLCATSY
EAMLDFVGSTFGLDTKRFKAITSSHLTRSKNKVQNYTVVQEPQEILAPKLVGCHPMSYPYTIFY
CHSATNTKGFKVSLVGDNGDMIEAIAVCHFDTSEWSRDHPAFRELGAEPGSTDVCHFFPADHMV
WFPSDA

Repeat found in LOC126667990
Repeat occurs 8 times in a sequence of 518 amino acids
Location between 50417008 and 50422352
Coverage of 23.17 %
Instances:
EQEKSLLNDFQPKPN | EQEKALLNDFQPKPN | EQEKALLNDFQPKPN | EQEKALLNDFQPKPN | EQEKPLLNDFQPKPN
EQEKALLNDFQPKPN | EQEKALLNDFQPKPN | EQEKSFRSDGMDGNS |
pattern: EQEK[PAS][LF][RL][SN]D[GF][QM][PD][GK][PN][SN]
MSFFASMKFSLLSVFALLCLMLVVSNASMPNDNYLRSKVPNTPMPRKFGNRQQPAVEIRGQDA
FWDMGFEERKIEYGSDGEQEKSLLNDFQPKPNLFPYFGYHNSRNDEQEKALLNDFQPKPNLFPY
IGYHNGRNDEQEKALLNDFQPKPNLFPYFGYHNGRNDEQEKALLNDFQPKPNLFPYFGYHNGRN
DEQEKPLLNDFQPKPNLFPYFGYHNGRNDEQEKALLNDFQPKPNLFPYFGYHNGRNDEQEKALL
NDFQPKPNIFPYFGYRNGRNDEQEKSFRSDGMDGNSPFIVFFRRNDLKVNNKLPISLPPLNNDH
SAKDPPLLPREQAESYPFSSHKFPHILRLFSISPHSPQAKAMEEAITLCEGKSLTGETKLCATS
YEAMLDFVGSTFGLDTKRFKAITSSHLTRSKNKVQNYTVVQEPQEILAPKLVGCHPMSYPYTIF
YCHSATNTKGFKVSLVGDNGDMIEAIAVCHFDTSEWSRDHPAFRELGAEPGSTDVCHFFPADHM
VWFPSDA

Repeat found in LOC126668682
Repeat occurs 4 times in a sequence of 518 amino acids
Location between 50465610 and 50471524
Coverage of 5.41 %
Instances:
ASSNPKK | ASSDAKD | ASSNPKK | ASSDAKD |
pattern: ASS[DN][PA]K[DK]
MLASSNPKKRAGRKKFKETRHPVFRGVRLRNSGKWVCEVREPNKKSRIWLGTFATAEMAARAH
DVAALALRGRSACLNFADSSWRLPIPASSDAKDIQKAAGEAAKAFEPIEIEADESKNSGVSENV
VYMDEEAVFGMPGLLSDMAEAMLLSPPACLADDREEVETYAADVSLLWSFSIYWWLLAVADSCK
LLAGVAFLSALSSWVMICGLILIISKTFEANVHALAFKTATISSLNFRICRPLSLKSFFEETFV
AIIFGIISFFWISFFFPVVIRPELFVPAGCLFLGVLFFYINKTKICYFIYHNSFLKMDHSLWSS
SSLDFPNLVSLSSLISDEEQHILASSNPKKRAGRKKFKETRHPVFRGVRLRNSGKWVCEVREPN
KKSRIWLGTFATAEMAARAHDVAALALRGRAACLNFADSSWRLPIPASSDAKDIQKAAAEAAKA
FEPIETEADESRNSGVSENVVYMDEEAVFGMPGLLTDMAKAMLLSPPPCLADSREEVETYAADE
SLWSFSI

Repeat found in LOC126668664
Repeat occurs 4 times in a sequence of 148 amino acids
Location between 50591459 and 50591906
Coverage of 37.84 %
Instances:
PTKPTKPSNPTKPT | PTKPSNPTKPTKPS | PTKPTKPSNPTPMP | PTKPSNPTPMPPTP |
pattern: PTKP[ST][KN]P[ST][PKN][PM][PT][PK][PTM][PST]
MASTNNLSASIFILSVLILSTISNACVPCEPTHPTKPTKPSNPTKPTKPSNPTPMPPTPSKQT
CPIDALKLGVCADLLGVVNVVIGGSPSGSKCCALIQGLADLDVGLCLCTAIKANVLGINLNVPV
SLGLLVNACDKSLPSGFKCPS

### Similar gene clusters

### Similar known gene clusters

### NC_065572 - Cluster 21 - Alkaloid-fatty_acid

### Gene cluster description

Download cluster GenBank file
NC_065572 - Gene Cluster 21. Type = alkaloid-fatty_acid. Location: 56679285 - 57201527 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065572 - Cluster 22 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_065572 - Gene Cluster 22. Type = cyclopeptide. Location: 67377211 - 67901756 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC126673833
Repeat occurs 3 times in a sequence of 190 amino acids
Location between 67445104 and 67448415
Coverage of 9.47 %
Instances:
KACDKT | KACFRC | KACFRC |
pattern: KAC[DF][RK][CT]
MATFGGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYSSFEGVLYCKPHF
DQLFKMTGSLDKSFEGAPKTVRDRSADQANSNSRVSSMFAGTQDKCVACKRTVYPIEKVAVDGT
SYHKACFRCTHGGCVISPSNYVAHEHRLYCRHHHNQLFKQKGNFSQLDKHEDVTTSAEIPSTE

Repeat found in LOC126672896
Repeat occurs 7 times in a sequence of 1150 amino acids
Location between 67453969 and 67458514
Coverage of 9.13 %
Instances:
ADVDDCADVDDCADV | ADVDDCADVDDCADV | ADVDDCADVDDCADV | ADVDDCADVDDCADV | ADVDDCADVDDCADV
ADVDDCADVDDGDDF | ADVDDGDDFSDEDEE |
pattern: ADVDD[CG][DA]D[FV][DS]D[CEG][DA][DE][FVE]
MTTNALPALKIYWDGTILSTPGGVDYVSGKSEMVELTRVVNFAQLQVVIRRVIGLNDADEIVK
IYLRVPRFDEHGRFQKYDGFPMETDVHMEAMWRNVSRTPQMRVVEFYIVYNPLSQVRADVDDCA
DVDDCADVDDCADVDDCADVDDCADVDDCADVDDGDDFSDEDEEEEHFYGAVADDNEDDDDDDD
DIGGENGDGTHGENVGGGSEQNTDHFESRLPHEYTDQNIDDMRVNMNLWPKENAIWEAGKEFEL
GMVFSSRYAVQTCAASYHIAANKEYKSSETTGKTIVLVCVKNDTCNWRLRASLLKGESDWMITR
YNGPHQCSGQSMNQDHRNLRARQIADHIDTQLHLQRDIRIKTLQEGIFQKLRVRPGYKKTWYAK
EKAIANRFGQWDDSFKEICNFMTNVTVANPRTVWHATGTPIENNPQFRTFKHMFWTYEPVVKGF
QYCKPVVYIDGTHTYGKYEMTLLIASAIEGNNHIMPIAFAIVKSETAASWRYFMWMLKRYVLGE
RKVCIISDRGSGIMSAMEGPEWGGGGGGDTHKWCIRHLVSNFHNAFKKKYLKKLAEKAGRAYQE
HKRDRYMSLIEADSPEGYAYLDRLDVTKWSMSGDTSGMRHGVMTTNYAESVNAMLKNIRGLPIT
AMLEAIFNKVNSVFIKHVNDYKTWLASGFMWTPVCAHRMETWENKSRTHTASQFNVAQKVFNVL
TQCDNVRQKGGNTQQVRLLDGTCTCGKFQQWKIPCSHAIAACNQYGENYRDYISWYYKCEYGIL
AWSSVSFEPLWNRKRWYFFKLYADFVERVRRDAPVDTELRRFAASTQRGTREDRRDVTSPPIEP
SIPPHRLPVIPDAPIDPTTLRHRRRQRRHPPAPPQRPTDPMPPPVVFHPFRGHYYYAGSSSAPP
PFSSGPPSSSGQFYGDSAHHYFQGSCSYPVPPGPSSPFVPPPPAYVPPTVPPFQVQWDQPTQGT
QDFPASQGLPQTPGTTDFLAYGSSWLGLDSMEAMMFRQQGEFVTPPPATTSTAIPQDQQGDDGA
DDEEGDAGEGDGDGRPGRRYLTISTGRRANRNRNNLRSNLPVTSRYDDRTPSKPRNTYAVCHVG
SANRVSVTRSAFAYVAPPARSHYINTRGEQEPNQTEKPDQIKPENYGNRTELTEVFRLKKIGV

### Similar gene clusters

### NC_065572 - Cluster 23 - Transporter_associated

### Gene cluster description

Download cluster GenBank file
NC_065572 - Gene Cluster 23. Type = transporter_associated. Location: 68918310 - 69103722 nt. Click on genes for more information.
Show pHMM detection rules used
plants/transporter_associated: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[MatE/LTP_2/ABC2_membrane/ABC_tran]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065572 - Cluster 24 - Putative

### Gene cluster description

Download cluster GenBank file
NC_065572 - Gene Cluster 24. Type = putative. Location: 69440849 - 69517459 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065572 - Cluster 25 - Terpene

### Gene cluster description

Download cluster GenBank file
NC_065572 - Gene Cluster 25. Type = terpene. Location: 72707016 - 72741688 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### Similar known gene clusters

### NC_065572 - Cluster 26 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_065572 - Gene Cluster 26. Type = cyclopeptide. Location: 74105832 - 74355763 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC126675296
Repeat occurs 6 times in a sequence of 1783 amino acids
Location between 74205661 and 74213799
Coverage of 2.02 %
Instances:
RGRPKK | RGRLAK | RGRRRK | RGRPPR | RGRKKG
RGRPKK |
pattern: RGR[PLRK][RKPA][RKG]
METEFIGKLVKKEFKERGVGVVSGIVQSYDVSSGYFEILYEDGDSERLDFSGVASLLRQSEEP
ADHERRRGRPKKRRRVDLSKVSKGGFDSNCGSLLGGETLGNGNFDLNDGLVEGYSGNLRNDVDN
GVKEVLDLNAGFNLNLNEGFDLNDEGVRCVNGSDVSGDMKMKNRECIDLNLEVNGDIDESLSKD
LGANLKEREIGFDLNLQIDEEEANGERGRLAKEISSSEVLEGIANGACFIANGMLQEVHVTDDL
SVQLAKGILKKGTVSIEGSGGVDSVNVQDANTFKEDSPEVINEKQSDVGSVHQDQSGDGPKRRG
RRRKTLTHVDNLNSTPETVVVREAKIINGNQEDVRSLDKEGSGNLSKRRRGRPPRTLNSTTDTA
INAETHFIKEDCNVVTDEKQGDIESVYTVIGGKNRRLSDHVNATPERTVLRRSARRGLANNDVL
PVPFSVANEFSVSPAVSALTEEIPLKLRHEWDKEPLAFPAKVQLPPSSRKLDLAGIPVVDFFSV
YACLRSFSTLLFLSPFELEEFVAALRCSSSSSLFDSIHVCILQALKKHMDYLSNEGSESASNCL
RSLNWGFLDVITWPVFLAEYLLFLGSDFGTGIDPSLLMFLKIDYYKQPVSLKIEILRYLCDTII
EADAFRSELARRSSGADADVDFDRNINSGALRKRRSGMDASIVSALTEDAVDDSSDWNSDECCL
CKMDGSLICCDGCPAAYHSKCVGVVNDSLPEGDWFCPECAIERQKPWMKTRKSLRGAELLGADP
CGRLYFSSCGYLLVSDSCEPESSFSFYHKDDFNGVIQVLRSSEVIYGSILEVLLKHWDIPVNIN
GASNLDTLNHDMCVLPSVVASSEAPGDIHIVGQTCLSSEGSAETIQTSLENHNSKTELPSCSNK
STEPLGDDCLTPKKEIVIGSSTDGCTLTALNGTNADASQGKVGTGYLNYYSFGHTASLVAEDFM
RKPSDKKTEVIIMSAEEIISAQMKIMSKSCAKFHWPNIPSLSVNIQKENCGWCFSCRASSDDSG
CLFNMSLAPVGKGSLAEVVGLQSKRNKIGHLIDIVGHILVIEDRLQGLLLGPWLNPHYSKLWRK
SILKASDIVSVKHLLLTLESNISRLALSAEWLKHVDVSTTVGSASHIIIASSRASSKNGIGKKK
ARYPESDSNPSSNSSSGLSMLWWRGGRVSRRLFSWKAVPCSLVSKAARQAGSKKILGVVYPENS
DFAKRSKYIAWRAAVELSTTVEQLALQVREFDSNIKWDEILNTISLPMADKDCRKSIRLFKKAI
IRRKAVEAEVTKYLLDFGKRRCIPEIVIKKGSAVEESASERKKYWLNESYVPLHLLKSFEEKRI
ARRSSKMSSGKLSDADLLTKKPLKERGFSYLLAKAERPEYHQCRHCNKDVPIREAVCCQYCQGS
FHKRHVRKSMGSVSAQCKYTCHRCVDGNYMKVDSETAKNDAKKAKKKNRSSKNQYQKSKKVSEG
TSSVHPKNSKKTLRNSRSLRSEKNKKVTIVVPLRRSPRKAKLNALQNKKARGRKKGKPGRGRPK
KVTGQQPTKATSWRKKRTQAYHSYWLNGLLLTRKPEDERVMHFRKKRFVAPSQSVIYDQPTCRL
CSEAGYTSTVNYISCEMCGGWFHGDALGLDAENINKLIGFRCHMCRNNTPPVCPFASLTKDHES
SMDVVENSVANEFCAEGTGVKYQTEVNLLQESHVNEDNQGSLHADNSPQGLDDKSFVPESKLEI
GNEIDQMEPTSCSIGVDVMESESIELHPQLSMESAELLDEGGNQVPSLMGSPQLEK

### Similar gene clusters

### NC_065573 - Cluster 27 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_065573 - Gene Cluster 27. Type = saccharide. Location: 24992953 - 25073607 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065573 - Cluster 28 - Alkaloid

### Gene cluster description

Download cluster GenBank file
NC_065573 - Gene Cluster 28. Type = alkaloid. Location: 28744281 - 28804595 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065573 - Cluster 29 - Lignan

### Gene cluster description

Download cluster GenBank file
NC_065573 - Gene Cluster 29. Type = lignan. Location: 30500575 - 30555365 nt. Click on genes for more information.
Show pHMM detection rules used
plants/lignan: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Dirigent]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065573 - Cluster 30 - Putative

### Gene cluster description

Download cluster GenBank file
NC_065573 - Gene Cluster 30. Type = putative. Location: 30658407 - 30765798 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065573 - Cluster 31 - Terpene

### Gene cluster description

Download cluster GenBank file
NC_065573 - Gene Cluster 31. Type = terpene. Location: 31287148 - 31313680 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065573 - Cluster 32 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_065573 - Gene Cluster 32. Type = saccharide. Location: 36288981 - 36376326 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065573 - Cluster 33 - Alkaloid

### Gene cluster description

Download cluster GenBank file
NC_065573 - Gene Cluster 33. Type = alkaloid. Location: 37732371 - 37804408 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065574 - Cluster 34 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_065574 - Gene Cluster 34. Type = cyclopeptide. Location: 5458438 - 5751141 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC126680865
Repeat occurs 6 times in a sequence of 474 amino acids
Location between 5603753 and 5605825
Coverage of 11.39 %
Instances:
YQNSGNSEQ | YQNGADGEK | YQNGADGEK | YQNGADGEK | YQNGADGEK
YQNRGNDII |
pattern: YQN[GRS][GA][DN][GSD][EI][QKI]
MKVIFIVLALLSLHWLAFKLDAAKDLRETVPNGGEGITSQNDFQSNSKTPVLSEYQNSGNSEQ
EKSPLNDSQPEPNPLDIWKSQNGVDGEKEKIPQNYNFQPEPNQLFFWRYQNGADGEKVKILQNH
NFQPEPNQLFFWRYQNGADGEKVKILQNHNFQPEPNQLFFWKYQNGADGEKVKILQNHNFQPEP
NQLFFWRYQNGADGEKVKILQNHNFQPESNQLFFWKYQNRGNDIIRLPSMKKDGDDNPPFITFF
TKNDLKAGNKLPINLRPFDRSSKDPPLLSKKQAESYPFSYKQFEHLLHLFSVEPKSPQAQAMDE
ALKYCEAEPLRIETKFCATSFEAMLDLLTRTFGLDSKNLKAISTMHLTKPKNKVQNYTITEEPK
ELATPKLIACHIMPYPYIVFYCHSIEHTKGFRVSLVGENGDAIETIAVCHSDTSEWSPEHVAFR
EVGGKPGSTEVCHFSPSGHLLWIPLQA

### Similar gene clusters

### NC_065574 - Cluster 35 - Terpene

### Gene cluster description

Download cluster GenBank file
NC_065574 - Gene Cluster 35. Type = terpene. Location: 7425348 - 7552412 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### Similar known gene clusters

### NC_065574 - Cluster 36 - Putative

### Gene cluster description

Download cluster GenBank file
NC_065574 - Gene Cluster 36. Type = putative. Location: 9114021 - 9261441 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065574 - Cluster 37 - Phenolamide

### Gene cluster description

Download cluster GenBank file
NC_065574 - Gene Cluster 37. Type = phenolamide. Location: 10582128 - 10714408 nt. Click on genes for more information.
Show pHMM detection rules used
plants/phenolamide: (minimum(2,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_Arg_deC_N,YjeF_N,Putative_PNPOx,PNP_phzG_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,Pyridoxal_deC]) or minimum(2,[MatE,Orn_Arg_deC_N,YjeF_N,Putative_PNPOx,PNP_phzG_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,Orn_DAP_Arg_deC,Orn_Arg_deC_N]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065574 - Cluster 38 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_065574 - Gene Cluster 38. Type = saccharide. Location: 12097609 - 12194545 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065574 - Cluster 39 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_065574 - Gene Cluster 39. Type = saccharide. Location: 16192099 - 16374525 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065574 - Cluster 40 - Terpene

### Gene cluster description

Download cluster GenBank file
NC_065574 - Gene Cluster 40. Type = terpene. Location: 42495912 - 42910700 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065574 - Cluster 41 - Terpene-saccharide

### Gene cluster description

Download cluster GenBank file
NC_065574 - Gene Cluster 41. Type = terpene-saccharide. Location: 43032297 - 43211187 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065574 - Cluster 42 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_065574 - Gene Cluster 42. Type = cyclopeptide. Location: 46934471 - 47954665 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC126682891
Repeat occurs 3 times in a sequence of 220 amino acids
Location between 47343510 and 47344240
Coverage of 8.18 %
Instances:
DGDAEE | DGDAED | DGDQLQ |
pattern: DGD[QA][LE][DEQ]
MASTVVLDHAAAEKREEGYLILPDSPDRKKLKMDGDAEEREEDSPIIPDSRNPETGGDTDDEI
KMDGDAEDYTSYVIDDDEITMDDLLPMYRTADNLQALKKYFDQIKESGGFDFDPYHGSPVIGGI
SPLDLGQDTIHVRGVKKALDFAIRRENAKRKDGDQLQLVRLIKSNYICGGTFYITFEAKSVDIQ
VYQAKVAYCVYGAIDEQTQAEVLLFRRKP

Repeat found in LOC126680041
Repeat occurs 3 times in a sequence of 127 amino acids
Location between 47352365 and 47353193
Coverage of 25.98 %
Instances:
DFEPRPNLSVY | DFEPRPNLSVY | DFEPRPNLSVY |
pattern: DFEPRPNLSVY
The following known motifs were found:
FEPR was found 3 times in this sequence
MKSSTFITFFLFFVIANTTINARKDVGVNWSSNVTEDDQIAETSANYEQKQVIMSEDKTSFSD
DFEPRPNLSVYPNLSVYHDDASDGKDGKSFVKDFEPRPNLSVYPNLSVYDDDVGLKEEKPFVND
FEPRPNLSVYSD

### Similar gene clusters

### NC_065575 - Cluster 43 - Terpene-saccharide

### Gene cluster description

Download cluster GenBank file
NC_065575 - Gene Cluster 43. Type = terpene-saccharide. Location: 352926 - 405572 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065575 - Cluster 44 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_065575 - Gene Cluster 44. Type = cyclopeptide. Location: 2353151 - 2991554 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC126653790
Repeat occurs 3 times in a sequence of 507 amino acids
Location between 2389602 and 2393397
Coverage of 4.73 %
Instances:
SSSSEPFF | SSSEPFFG | SSSDEPGF |
pattern: SSS[DES][PE][PF][GF][GF]
MTNGGDDKRSKCRRDSHTAEEVITSPLKKGPWTSTEDSILADYVSQHGEGNWNAVQKHSGLSR
CGKSCRLRWANHLRPDLKKGAFTTEEERRIIELHAKMGNKWARMAAELPGRTDNEIKNYWNTRI
KRLQRAGLPIYPPEVCMQVLNGSHESYSMGTPQTTDTHNSDLIQTDHFEIPKVEFENLELNRGH
LSYSPHMLEISGSNMPKQGAHPSDCNNYFQHLHPAKRLRESDHIFPGLDGSIGSLPAFIQSVDC
SSEKITDSFGYSSLYDSHPFNYYQQPLAYLSGSHALLNDNSSSSEPFFGAVKLELPSLQYSDTQ
QDSWGRPTSPLPSLESVDTLIQSPSTEQSQSDCLSTRCDGTLEAVIYESQSLKNSKKCSKHQTS
VTSVAPRDVEDCPSIPRGTEWEVHGDSNSPVGNSAASLFNACTPVSRSSSDEPGFDIKPKIANS
GLSTFMEDKEAPCKFDSTRPDVLLGTFWCGFSSGHVKNENFRNEDVQVPFDAESFDGDWK

Repeat found in LOC126686626
Repeat occurs 3 times in a sequence of 249 amino acids
Location between 2505403 and 2506153
Coverage of 9.64 %
Instances:
EDKTLVEI | EDKTLVEI | EDKSVVEL |
pattern: EDK[ST][LV]VE[LI]
MSNEDKTLVEISEENNRVDLANEDKTLVEILEENNPIDLAKYISYVSAPQAGGIATFSGTTRD
TFEDKSVVELRYEAYVPMAIRELKSICASARTSWDIHSIAVAHRLGSVPVGETSVFVAVSAVHR
GDALDACKFIIDDLKASVPIWKKEVYANGEVWKENSEFMERKPEIGKSASYGVHGKKSCCGTKV
KVNEESPDISNQDSGIRVKVSEAGRKISSTHDGIRMSGGGRKTSAQNGGVTIKVSEVS

Repeat found in LOC130014734
Repeat occurs 11 times in a sequence of 502 amino acids
Location between 2642780 and 2645474
Coverage of 32.87 %
Instances:
DKREKYGKRYDAAFA | DKREKYGKRYDAAFA | DKREKYGKRYDAAFA | DKREKYGKRYDAAFA | DKREKYGKRYDAAFA
DKREKYGKRYDAAFA | DKREKYGKRYDAAFA | DKRKKYGKRYDAAFA | DKREKYGKRYDAAFA | DKREKYGKRYDAAFA
DKREKYGKRYDAEFK |
pattern: DKR[KE]KYGKRYDA[AE]F[AK]
MEFLLLPLFAVFCMVLVGINASVPSEDYWHSKLPNTPIPAELQNLIQPNAEIGGKFFFWDMGF
NNDHSLLQSADDKREKYGKRYDAAFAEGTNDKREKYGKRYDAAFAEGTNDKREKYGKRYDAAFA
KETNDKREKYGKRYDAAFAEGTNDKREKYGKRYDAAFAEGTNDKREKYGKRYDAAFAEGTNDKR
EKYGKRYDAAFAEGTNDKRKKYGKRYDAAFAEGINDKREKYGKRYDAAFAEGTNDKREKYGKRY
DAAFAEGTNDKREKYGKRYDAEFKKHSLPNSTVFFLQKDLQIGQKMKLHITKSSNKAKFLPREA
AESMPFSSKNLQKILQKFSIKPDSKQAKMIKQTIEDCESPGIKGEERYCPTSLESLLDFALPVV
GNKTKILYNEIDRPTRIQEYTIMGVELAGENQVVCHKQKYPYAVYYCHSVSATKVYQAPLVGAD
GIKAKAVAICHSDTSHWNPQHLAFLMLNIKPGEATVCHFIRSDTIVWTSNKAISN

Repeat found in LOC126686681
Repeat occurs 13 times in a sequence of 592 amino acids
Location between 2675304 and 2680230
Coverage of 32.94 %
Instances:
GSKFFFWDMGFNCGQ | GSKKKQRYKIGYDDA | GSKKRQRYKIGYDDA | GSKKKQRYKIGYENA | GSKKKQRYKIGYDDA
GSKKKQRYKIGYDGG | GSKKKQRYKIEYDDA | GSKKKQRYKIGYNDA | GSKKKQKYKIGYDDA | GSKKKQKYKIGYDDA
GSKKKQRYKIGYDDA | GSKKKQRYKIGYDDV | GSKKKQRYKIGYDAA |
pattern: GSK[FK][RFK][QF][RKW][DY][KM][GI][GFE][YN][CEND][GAND][QAVG]
MTSMEFLLPLFAVFCLILVGSNASVPSEDYWHSKLPNTPIPDELQKLIQPTETGSKFFFWDMG
FNCGQSLLQAMDDKKSKDGDATFVEVDGSKKKQRYKIGYDDAGFEEADGSKKRQRYKIGYDDAE
FEEADGSKKKQRYKIGYENAGFEEADGSKKKQRYKIGYDDAEFEEADGSKKKQRYKIGYDGGFE
EADGSKKKQRYKIEYDDADFEEADGSKKKQRYKIGYNDADFEEADGSKKKQKYKIGYDDADFEE
ADGSKKKQKYKIGYDDADFEEADGSKKKQRYKIGYDDADFEEADGSKKKQRYKIGYDDVEFEEA
DGSKKKQRYKIGYDAALKEGDSAEKNKKYNIAYNAAFEEGGDARSKRRYKIGLNKHALPNSTVF
FLQKDLQAGQKMKLHITKSSNKAKFLPRQDSEAIPFSSKNLQAILQKFSIKPDSKQAKIIKQTI
IDCESQGIKGEEKNCPTSLESLIDFSIPVVGKKLQILYNEVARPTRIQEYTIMGVEMIGENQVV
CHKQKYPYAVYYCHSVSATKVYQAPLVGADGIKAKAVAICHSDTSDWNPKHLAFLMLNVKPGEG
TVCHFISSDTVVWTSKK

Repeat found in LOC126686681
Repeat occurs 13 times in a sequence of 593 amino acids
Location between 2675304 and 2680230
Coverage of 32.88 %
Instances:
GSKFFFWDMGFNCGQ | GSKKKQRYKIGYDDA | GSKKRQRYKIGYDDA | GSKKKQRYKIGYENA | GSKKKQRYKIGYDDA
GSKKKQRYKIGYDGG | GSKKKQRYKIEYDDA | GSKKKQRYKIGYNDA | GSKKKQKYKIGYDDA | GSKKKQKYKIGYDDA
GSKKKQRYKIGYDDA | GSKKKQRYKIGYDDV | GSKKKQRYKIGYDAA |
pattern: GSK[FK][RFK][QF][RKW][DY][KM][GI][GFE][YN][CEND][GAND][QAVG]
MTSMEFLLPLFAVFCLILVGSNASVPSEDYWHSKLPNTPIPDELQKLIQPTAETGSKFFFWDM
GFNCGQSLLQAMDDKKSKDGDATFVEVDGSKKKQRYKIGYDDAGFEEADGSKKRQRYKIGYDDA
EFEEADGSKKKQRYKIGYENAGFEEADGSKKKQRYKIGYDDAEFEEADGSKKKQRYKIGYDGGF
EEADGSKKKQRYKIEYDDADFEEADGSKKKQRYKIGYNDADFEEADGSKKKQKYKIGYDDADFE
EADGSKKKQKYKIGYDDADFEEADGSKKKQRYKIGYDDADFEEADGSKKKQRYKIGYDDVEFEE
ADGSKKKQRYKIGYDAALKEGDSAEKNKKYNIAYNAAFEEGGDARSKRRYKIGLNKHALPNSTV
FFLQKDLQAGQKMKLHITKSSNKAKFLPRQDSEAIPFSSKNLQAILQKFSIKPDSKQAKIIKQT
IIDCESQGIKGEEKNCPTSLESLIDFSIPVVGKKLQILYNEVARPTRIQEYTIMGVEMIGENQV
VCHKQKYPYAVYYCHSVSATKVYQAPLVGADGIKAKAVAICHSDTSDWNPKHLAFLMLNVKPGE
GTVCHFISSDTVVWTSKK

Repeat found in LOC126687263
Repeat occurs 15 times in a sequence of 579 amino acids
Location between 2692185 and 2701924
Coverage of 38.86 %
Instances:
KYGKRYDASFSESVD | KYGKRYDAAFEEGTN | KYGKRYDAAFEEGTN | KYGKRYDAAFEEGTN | KYGKRYDAAFEEGTN
KYGKRYDAAFEEGTN | KYGKRYDAAFEEGTN | KYGKRYDAAFEEGTN | KYGKRYDAAFEEGTN | KYGKRYDAAFEEGTN
KYGKRYDAAFEEGTN | KYGKRYDAAFEEGTN | KYGKRYDAAFEEGTN | KYGKRYDAAFEEGTN | KYGKRYKIGFKKHAL
pattern: KYGKRY[DK][AI][GAS]F[EKS][KE][GHS][AVT][DLN]
MNLMASMEFLILPLFAVFCMILGGSNASVPSEEYWHSKLPNTPIPAELQKLIQPAELGGKFSF
WDMGFNNDQSLLQAMDDKRSKYGKRYDASFSESVDDKRSKYGKRYDAAFEEGTNDKREKYGKRY
DAAFEEGTNDKREKYGKRYDAAFEEGTNDKREKYGKRYDAAFEEGTNDKREKYGKRYDAAFEEG
TNDKREKYGKRYDAAFEEGTNDKREKYGKRYDAAFEEGTNDKREKYGKRYDAAFEEGTNDKREK
YGKRYDAAFEEGTNDKREKYGKRYDAAFEEGTNDKREKYGKRYDAAFEEGTNDKREKYGKRYDA
AFEEGTNDKREKYGKRYDAAFEEGTNDRREKYGKRYKIGFKKHALPNSTVFFLQKDLQVGQKMK
LHITKSSNKAKFLPRQDSESMPFSSKILPQILQKFSVKPDSMQAKIIKQTIDDCESSAIKGEER
YCPKSLESLLDFAIPVVGNKTQVLYNEVERPSRIQEYTIMGVKMVGENQVVCHKQKYPYAVYYC
HSVSATKVYQAPLVGADGLKAKAVAICHSDTSNWNPQHLAFLMLNVKPGEATICHFIRSDTIVW
TSNK

Repeat found in LOC126687263
Repeat occurs 15 times in a sequence of 580 amino acids
Location between 2692185 and 2701924
Coverage of 38.79 %
Instances:
KYGKRYDASFSESVD | KYGKRYDAAFEEGTN | KYGKRYDAAFEEGTN | KYGKRYDAAFEEGTN | KYGKRYDAAFEEGTN
KYGKRYDAAFEEGTN | KYGKRYDAAFEEGTN | KYGKRYDAAFEEGTN | KYGKRYDAAFEEGTN | KYGKRYDAAFEEGTN
KYGKRYDAAFEEGTN | KYGKRYDAAFEEGTN | KYGKRYDAAFEEGTN | KYGKRYDAAFEEGTN | KYGKRYKIGFKKHAL
pattern: KYGKRY[DK][AI][GAS]F[EKS][KE][GHS][AVT][DLN]
MNLMASMEFLILPLFAVFCMILGGSNASVPSEEYWHSKLPNTPIPAELQKLIQPAAELGGKFS
FWDMGFNNDQSLLQAMDDKRSKYGKRYDASFSESVDDKRSKYGKRYDAAFEEGTNDKREKYGKR
YDAAFEEGTNDKREKYGKRYDAAFEEGTNDKREKYGKRYDAAFEEGTNDKREKYGKRYDAAFEE
GTNDKREKYGKRYDAAFEEGTNDKREKYGKRYDAAFEEGTNDKREKYGKRYDAAFEEGTNDKRE
KYGKRYDAAFEEGTNDKREKYGKRYDAAFEEGTNDKREKYGKRYDAAFEEGTNDKREKYGKRYD
AAFEEGTNDKREKYGKRYDAAFEEGTNDRREKYGKRYKIGFKKHALPNSTVFFLQKDLQVGQKM
KLHITKSSNKAKFLPRQDSESMPFSSKILPQILQKFSVKPDSMQAKIIKQTIDDCESSAIKGEE
RYCPKSLESLLDFAIPVVGNKTQVLYNEVERPSRIQEYTIMGVKMVGENQVVCHKQKYPYAVYY
CHSVSATKVYQAPLVGADGLKAKAVAICHSDTSNWNPQHLAFLMLNVKPGEATICHFIRSDTIV
WTSNK

### Similar gene clusters

### NC_065575 - Cluster 45 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_065575 - Gene Cluster 45. Type = cyclopeptide. Location: 3517580 - 3869861 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC126653674
Repeat occurs 4 times in a sequence of 695 amino acids
Location between 3583614 and 3585702
Coverage of 3.45 %
Instances:
EALELF | EALELF | EALNVF | EALKLF |
pattern: EAL[KEN][LV]F
MDTAKLSTILLKCITSNSLLRGKLCHQKIITLGLQNNVALCKNLIKFYFSFQTYDYAKLVFKT
IDNPLDISLWNGLMAAYTKNYMYIEALELFQSLLQFPHLKPDSFTYPSLLKACAGLGKVSYGRM
VHAHVVKSGFVSDTVVVSSLVRLYGKCDLFVCAVKLFDEMPERDVVSWNTVISCCYQDGRAGEA
LELFGRMREFGFEPNSVTVTVAISCCARVLDLERGREIHRDVVDNGLVFDGFVSSALVDMYGKC
GCLDVAKDIFERMTKKTPVAWNSLIAGYSLVGDSKECIQLLKRMIMEGTQPTLTTLTSILLVCS
RVSHFRHGRSIHGYLIRHKVDFDIFVGSGLIDLYFKCGRIPSAENIFNMLLPDANAVSWNIMIS
GYVSVGDYFKTIGLFDEMKGAKIKPDAVTFSTVLSACSQLAALVKGKEIHNCVEEQGLETNEIV
MGALLDMYAKCGAVDEALNVFNKLPEKDLISWTSMITAYGSHGQAFEALKLFEDMQQSDVKPDA
VTFIAVLSACGHAGLVDEGYGYFNQMTTDYGIKPGIEHCSCLIDLLGRAGRLHEAYNILQNSPE
IIDDVGLLSTLLSACLLHKDVELGEEIAELLIRKDPDDSATYITLSNLYASVKNWEKMGMLRLK
MKELGLKKNPGCSWIEIDKRIQPFFVKDWSHPEPDMVHDCLVILYNHMEKDELPLP

Repeat found in LOC126653674
Repeat occurs 4 times in a sequence of 695 amino acids
Location between 3583614 and 3585702
Coverage of 3.45 %
Instances:
EALELF | EALELF | EALNVF | EALKLF |
pattern: EAL[KEN][LV]F
MDTAKLSTILLKCITSNSLLRGKLCHQKIITLGLQNNVALCKNLIKFYFSFQTYDYAKLVFKT
IDNPLDISLWNGLMAAYTKNYMYIEALELFQSLLQFPHLKPDSFTYPSLLKACAGLGKVSYGRM
VHAHVVKSGFVSDTVVVSSLVRLYGKCDLFVCAVKLFDEMPERDVVSWNTVISCCYQDGRAGEA
LELFGRMREFGFEPNSVTVTVAISCCARVLDLERGREIHRDVVDNGLVFDGFVSSALVDMYGKC
GCLDVAKDIFERMTKKTPVAWNSLIAGYSLVGDSKECIQLLKRMIMEGTQPTLTTLTSILLVCS
RVSHFRHGRSIHGYLIRHKVDFDIFVGSGLIDLYFKCGRIPSAENIFNMLLPDANAVSWNIMIS
GYVSVGDYFKTIGLFDEMKGAKIKPDAVTFSTVLSACSQLAALVKGKEIHNCVEEQGLETNEIV
MGALLDMYAKCGAVDEALNVFNKLPEKDLISWTSMITAYGSHGQAFEALKLFEDMQQSDVKPDA
VTFIAVLSACGHAGLVDEGYGYFNQMTTDYGIKPGIEHCSCLIDLLGRAGRLHEAYNILQNSPE
IIDDVGLLSTLLSACLLHKDVELGEEIAELLIRKDPDDSATYITLSNLYASVKNWEKMGMLRLK
MKELGLKKNPGCSWIEIDKRIQPFFVKDWSHPEPDMVHDCLVILYNHMEKDELPLP

Repeat found in LOC126687462
Repeat occurs 3 times in a sequence of 352 amino acids
Location between 3744747 and 3745912
Coverage of 5.11 %
Instances:
KEIEDH | KEIKSR | KEIQDR |
pattern: KEI[QKE][DS][HR]
MEGKTVSSELKLSELSRQNIRQSINQLHDRASSVLVLTLQWKEIEDHFNSIQRGIEQRAMELN
SVQESAEQRLKEIKSREDELEVVKESVSWRIREAEEREKEFKFIQKKEIQDRKVEMEWIEKSRN
QLDAESSAMGADVSFRVTMDGEALQLLLNDYCNDRDSIRQELLISLGFSPNPAKLVLDAVKGFY
QGGLEFGEGIVRSSCVFLLEILLQIRPEISPEVRNEAMQLSLDWMKQMRKDSEHSTEVLGCLLL
LGSYRLASAFDADELFRCLKIVSHHSQASQLLRALGLVDKLSGFIQNLVKQNKHIEAIRFIYDF
QLLNEFPLEPLLEDNISSCRNAITNNNVIAEWE

### Similar gene clusters

### NC_065575 - Cluster 46 - Terpene

### Gene cluster description

Download cluster GenBank file
NC_065575 - Gene Cluster 46. Type = terpene. Location: 41968358 - 42042011 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065575 - Cluster 47 - Alkaloid

### Gene cluster description

Download cluster GenBank file
NC_065575 - Gene Cluster 47. Type = alkaloid. Location: 43665389 - 43727572 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065575 - Cluster 48 - Putative

### Gene cluster description

Download cluster GenBank file
NC_065575 - Gene Cluster 48. Type = putative. Location: 45515112 - 45604188 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065576 - Cluster 49 - Terpene

### Gene cluster description

Download cluster GenBank file
NC_065576 - Gene Cluster 49. Type = terpene. Location: 13164559 - 13269223 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

No significant ClusterBlast hits found.

### NC_065576 - Cluster 50 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_065576 - Gene Cluster 50. Type = cyclopeptide. Location: 31282959 - 32886544 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC126655831
Repeat occurs 8 times in a sequence of 524 amino acids
Location between 32083771 and 32085731
Coverage of 22.9 %
Instances:
PLFFYQSGGADEQAK | PLFFYQSGSADEQKK | PLFFYASRDVNKQEK | PLFFIQSGGADEEEK | PLFFYQSGDGHEQEK
PLFFYQSGGADEKEK | PLFFYQSRGADEQEK | PLFFYQNGGVDEQEK |
pattern: PLFF[YI][QA][SN][GR][GSD][GAV][DHN][KE][QKE][AKE]K
MRATFAVFAIFSLYSLAFKLDARKELEENTPLKKSESKPNIPSYLKYQKKSPQNDFQPISILP
IYLKYKSRDDSDKEKSQSNNFEPKRKFPINFKYQNGGAGEQEKSPFNDFQHKPNNPLFFYQSGG
ADEQAKSPLKDFQHKPNNPLFFYQSGSADEQKKSPLNDFQDKPNNPLFFYASRDVNKQEKVILN
DFQLKLGNPGFFYQSGGADEQKKLPLNDFQYKPNDPLFFIQSGGADEEEKSPVNNFQHEPNNPL
FFYQSGDGHEQEKITLNDFQLKPNNPLFFYQSGGADEKEKLPLNNFQHKSNNPLFFYQSRGADE
QEKSPLDEFQQKHNNPLFFYQNGGVDEQEKSLIKDVQPKPKFPIYFKYKNKVAPNSPQAKSMEE
ALVFCESKPISGETKFCATSFEAMIDFVSNTFGLASENFKAVTSTQLTKSKNKKQNYTITEVPK
EIQTAKQISCHPMSYPYKVFYCHTPKDTKVFRVSLVGENGDVIDAIAACHLREVGGKPTDVCHF
FPSDHMVWIPTEA

Repeat found in LOC126655831
Repeat occurs 8 times in a sequence of 607 amino acids
Location between 32083771 and 32085731
Coverage of 19.77 %
Instances:
PLFFYQSGGADEQAK | PLFFYQSGSADEQKK | PLFFYASRDVNKQEK | PLFFIQSGGADEEEK | PLFFYQSGDGHEQEK
PLFFYQSGGADEKEK | PLFFYQSRGADEQEK | PLFFYQNGGVDEQEK |
pattern: PLFF[YI][QA][SN][GR][GSD][GAV][DHN][KE][QKE][AKE]K
MRATFAVFAIFSLYSLAFKLDARKELEENTPLKKSESKPNIPSYLKYQKKSPQNDFQPISILP
IYLKYKSRDDSDKEKSQSNNFEPKRKFPINFKYQNGGAGEQEKSPFNDFQHKPNNPLFFYQSGG
ADEQAKSPLKDFQHKPNNPLFFYQSGSADEQKKSPLNDFQDKPNNPLFFYASRDVNKQEKVILN
DFQLKLGNPGFFYQSGGADEQKKLPLNDFQYKPNDPLFFIQSGGADEEEKSPVNNFQHEPNNPL
FFYQSGDGHEQEKITLNDFQLKPNNPLFFYQSGGADEKEKLPLNNFQHKSNNPLFFYQSRGADE
QEKSPLDEFQQKHNNPLFFYQNGGVDEQEKSLIKDVQPKPKFPIYFKYKNKGNNLLSMHDMNSN
SKHDSSVHGHHNLALIIPFTKNDLKVGNKLPVYLPAINHSSKDPPLLPREQAESYPFSYKQFHY
ILDLFSVAPNSPQAKSMEEALVFCESKPISGETKFCATSFEAMIDFVSNTFGLASENFKAVTST
QLTKSKNKKQNYTITEVPKEIQTAKQISCHPMSYPYKVFYCHTPKDTKVFRVSLVGENGDVIDA
IAACHLREVGGKPTDVCHFFPSDHMVWIPTEA

### Similar gene clusters

### NC_065576 - Cluster 51 - Alkaloid

### Gene cluster description

Download cluster GenBank file
NC_065576 - Gene Cluster 51. Type = alkaloid. Location: 40007036 - 40125374 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065576 - Cluster 52 - Fatty_acid-saccharide

### Gene cluster description

Download cluster GenBank file
NC_065576 - Gene Cluster 52. Type = fatty_acid-saccharide. Location: 46240995 - 46343953 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065576 - Cluster 53 - Lignan

### Gene cluster description

Download cluster GenBank file
NC_065576 - Gene Cluster 53. Type = lignan. Location: 46745137 - 46858876 nt. Click on genes for more information.
Show pHMM detection rules used
plants/lignan: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Dirigent]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065576 - Cluster 54 - Putative

### Gene cluster description

Download cluster GenBank file
NC_065576 - Gene Cluster 54. Type = putative. Location: 48173166 - 48370665 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065576 - Cluster 55 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_065576 - Gene Cluster 55. Type = cyclopeptide. Location: 49407702 - 49952896 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NC_065577 - Cluster 56 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_065577 - Gene Cluster 56. Type = saccharide. Location: 723452 - 819406 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065577 - Cluster 57 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_065577 - Gene Cluster 57. Type = saccharide. Location: 1122141 - 1160798 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065577 - Cluster 58 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_065577 - Gene Cluster 58. Type = cyclopeptide. Location: 1830435 - 2508685 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC126660335
Repeat occurs 5 times in a sequence of 948 amino acids
Location between 1836012 and 1839159
Coverage of 3.69 %
Instances:
AGDDIDV | AGDNIDE | AGDNIDE | AGDQIDE | AGDEEGD
pattern: AGD[DENQ][EI][DG][DVE]
MVTFLLLCLSLYLYYLFVYLGNDRLEAKIVQMILFYGGRIQMNEGTLAYVGGIQEIGDPMFSL
DKLSYFNILSYLHYFEIEKGDLYLKSDRIEFTKFENDRCVLPFWKLLLDNKENKFFVYVDYSKI
LDSQGIQSSREGGCEASGSVQAAQVIDLGEDLTFDDICIDIEDHSDDDEVELQEARKNVLESRQ
DLAGLANARAGDDIDVLGAGDNIDEVAGDNIDEVAGDQIDEDSGVMDEGEGEREVPEPRTEVAG
DEEGDSDSADLTYENESVYYSSSDVGSQFSENEDEYGDDSQREVSIRVQFDTTTEIPQFAVGMF
FSNLAEVRDAIARYAVMKGMCISYVKNDQQRVRAKCIVGCPWLIQVSPHNADHNWTIKTYKPDH
RCTRSNRVSFCDSNFLAKRYKTMVTNQHYIKLSDFRSIVRSELKQSVSLNVCRHAKTKIIAELM
GFYREEYAMLNDYAEIICHTNPGTHCFVKSTSENPEGKQEFHRFYVCFAACKKGWLQGCRKVIG
IDGCFLKGICKGQLLIAVGRDGNNQMFPIAWGVVLVENKDNWSWFMRMIQYDLELEDGEGFAVI
SDMQKGLESALKDILPKAEHRRCARHVYANWAKKWRGDERKKEFWSCAKATIGSDLKVRLKHLG
TLGKDIAKDALSYDIETWCKVYFDTSIKCDVVDNNLAETFNGWILEPRCKSIISMLEDIRIKVM
NRLWNKRDSIRGWISDISPRALQVIEKNKLLSFEWEVECNGDDGFEVAWLQDRRNKHTVDLVKR
TCTCKEWDLTGIPCKHSVTAIYAKRGNPEAYVHAYYSRDTYMKAYAYTIQPVPGKQHWLQSEKG
TIEPPPFKKLPGRPKKNRRKEPFEVKKKAKLSLHGRVMTCGICKGTGHNYRSCPQKGTNTQYKP
RQNKKKQPQASQPEATPSQQNTSRKRKRNQPSVDASTTVAARAKLRSRIRQTQ

Repeat found in LOC126662342
Repeat occurs 6 times in a sequence of 93 amino acids
Location between 1993840 and 1995376
Coverage of 45.16 %
Instances:
PPQGYPP | PPQGYPP | PPQGYPQ | PPQGYPP | PPQGGYP
PPQYAPQ |
pattern: PPQ[GY][GAY][PY][PQ]
MSYYNQQQPPVGVPPPQGYPPEGYAKDAYPPQGYPPQGYPQGYPPQGYPPQGGYPPQYAPQYA
QPPPRQNNSSGCMEGCLAALCCCCLLDACF

### Similar gene clusters

### NC_065577 - Cluster 59 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_065577 - Gene Cluster 59. Type = cyclopeptide. Location: 6779788 - 7067514 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC126660914
Repeat occurs 4 times in a sequence of 373 amino acids
Location between 6891111 and 6894173
Coverage of 6.43 %
Instances:
QQQQKP | QQQKPP | QQQQPS | QQQPSS |
pattern: QQQ[QKP][PKS][PS]
MANSKGSANVRNFMYSGKHALLPPKIPFPSVSPSYVDYVPSSVIGSKAVQRPKEGNSHHLRTS
SETLVIEEQPSWLDDLLDEPETPVRRGGHRRSSSDSFAYIDVANSYNTDYAAQDDYRYKNMIIP
SWGSQDYDYHKDARQASLYADVNPTKQRNRTLISSPNPLTRQSGLLSARESAVTQNSGCALQEA
DGIPSSLSEKQESAESSPYDSKASSERKDCSHAKSSIAETDTKRAKQQFAQRSRVRKLQYIAEL
ERNVQALQAEGSEVSAEVEFLNQQNLILNMENKALKQRLENLAQEQLIKYLEHEVLEREIGRLR
ALYQQQQKPPQQQQPSSSHRRTNSRDLESQFGNLSLKHKDANSGRDPVTGSLRT

Repeat found in LOC126660374
Repeat occurs 10 times in a sequence of 438 amino acids
Location between 6917285 and 6919895
Coverage of 18.26 %
Instances:
GPPPQNNG | GPPRYPPQ | GPPAQQNY | GPPQNYPQ | GPPQNHQP
GPPQNQPP | GPPQNQPP | GPPKNQPP | GPPQNQPP | GPPGQWER
pattern: GPP[PRQGAK][QYN][PQWHYN][PENQ][GRPQY]
MALQLTRLRRALTSLPTLHRSLSSPIITPTSPPLPLSQNPIESYLNSPLIFSHFQTRLFRVSG
PSLSSSKKEYRVYKEGDEITEDMVLFEGCDFNHWLITVDFPKDPAPTPQEMVATYERICAEGLR
ISIEEAKTKIYACSTTTYQGFQAVMTEEESEKFKDINGVVFVLPDSYIDPQNKQYGGDLYENGV
ITHRPPPIQYKRGGGRFRDGGNRNPEPRRYPMPNQSGSSQNNQQGPPPQNNGPPRYPPQQNYGP
PAQQNYGPPQNYPQQQNYGPPQNHQPQQNYGPPQNQPPQNYGPPQNQPPHQNYGPPKNQPPHQN
YGPPQNQPPHQSYGPPGQWERTPMNSGNHEANRGPYQTNQYTENPRGFAQGGQRDFMRENQNFS
LSQTGANGQGTTNAGYGQVHSGEGQRFSQMEQRNTQGEQANYAPAGQSEANRGRF

Repeat found in LOC126661132
Repeat occurs 3 times in a sequence of 399 amino acids
Location between 6969905 and 6971538
Coverage of 5.26 %
Instances:
SKSATIK | SKSTGRN | SKSTGRR |
pattern: SKS[AT][GT][RI][RKN]
MGDPPRSTTVDFYGILGISKSATIKEMCKAYKSLVTLWHPDKNPSNKDEAQVKFRQINEAYKA
LNEKKIQETPMKIAYEPKTPPPRDFPSRGGSSHHNKSMDESFFSRPSVQTNINKKSRISSRSPT
QLSRNASRRSTSPAQDTSRSKSTGRNMRRTTSPNPKNYLSTSPGSSPALPNKSRSKSTGRRRAS
DTEIPSSIISPTRMGATPIVYSQSTAWRIPSPVERKLECTLEELCHGCVKKIKITRDIISNGII
KKVDETLKIKVKPGWKQGTKIKFEGKGDEKPGYLPADIIFLIDEKRHPLFTRNGDDLEYGLEIQ
LVQSLTGCSISAPLLGGERMWLSFDEIIYPGYVKIIQGQGMPTKTEGKRGDLRITFFVEFPSEL
SDEQRTEAASILQDCS

### Similar gene clusters

### NC_065577 - Cluster 60 - Terpene-saccharide

### Gene cluster description

Download cluster GenBank file
NC_065577 - Gene Cluster 60. Type = terpene-saccharide. Location: 8520191 - 8651367 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065577 - Cluster 61 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_065577 - Gene Cluster 61. Type = cyclopeptide. Location: 8828642 - 9523848 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC126662183
Repeat occurs 4 times in a sequence of 269 amino acids
Location between 9011311 and 9012121
Coverage of 13.38 %
Instances:
PPPPPPISP | PPPPPISPP | PPPPISPPA | PPPISPPAA |
pattern: PPP[PI][PSI][PSI][PSI][PAS][PA]
MGLLTKELVPSFLNKFVSKSALTTTTQPSSNHSVAFYDRLLPAFAPKKPRSVLVKKRLYIKIL
GQTIYTGNRLNQAYSKNGLKRKFVEEVKSNNHNSRKKLLANPPPPPPISPPAALEAKINAMGGY
DVRFVIEKMLYKTDVDKHEDRLSIPVRQIRDAWFLDEDEQKIIYKKGEELSVKVLEPSDDRCDM
KLSKWNKPNSLTLRTKWKEVLGRNMDIVDKETNVVVEAKYFKKGDIIQLWSFRKQSVEGLKPEH
WLALINMTRIHEEP

Repeat found in LOC126660955
Repeat occurs 3 times in a sequence of 489 amino acids
Location between 9443161 and 9445611
Coverage of 3.68 %
Instances:
AYGESG | AYGNSG | AYGQAG |
pattern: AYG[QEN][AS]G
The following known motifs were found:
VS[AI]Y was found 2 times in this sequence
MAIHSQPQPISYTSFGWSHSISTPPTNHLIKFLTELNFHVHPVILAVKSSKLGSKVAPVGLQR
HPKKDLSRFLRTDAAIQAIEQKANSDKYNRLWPKAVLEALDDAMRENRWESALKIFELLRKQHW
YEPRSRTYTKLLMMLGKCRQPEEAGFLFETMQTEGLQPTIDVYTALVSAYGESGQLDKAFLLVN
EMKSVSDCKPDVYTYSILINICTKLRHFDLIGRILDEMSYLGVECSTVTFNTIIKGYGKAKMFR
EMENTLTEMIESGNSLPDLFTFNSVIGAYGNSGRLEKMEKWYDEFQLMGIDPDIKTFNILIKSY
GKEGMYEKINSVMKFMNKRFYSPTIVTYNIIIETFGKAGNIEKMDEYFKIMKHQGMKPNAITYC
SLVSAYSKAGLIMKVDSILRHVENSDVVLDTTFFNCIIHAYGQAGDIEKMTELFVKMSERECKP
DNITFATMIQAYIAQGMTEAAQELENKILGANTTSGTKMIEA

Repeat found in LOC126660955
Repeat occurs 3 times in a sequence of 489 amino acids
Location between 9443161 and 9445611
Coverage of 3.68 %
Instances:
AYGESG | AYGNSG | AYGQAG |
pattern: AYG[QEN][AS]G
The following known motifs were found:
VS[AI]Y was found 2 times in this sequence
MAIHSQPQPISYTSFGWSHSISTPPTNHLIKFLTELNFHVHPVILAVKSSKLGSKVAPVGLQR
HPKKDLSRFLRTDAAIQAIEQKANSDKYNRLWPKAVLEALDDAMRENRWESALKIFELLRKQHW
YEPRSRTYTKLLMMLGKCRQPEEAGFLFETMQTEGLQPTIDVYTALVSAYGESGQLDKAFLLVN
EMKSVSDCKPDVYTYSILINICTKLRHFDLIGRILDEMSYLGVECSTVTFNTIIKGYGKAKMFR
EMENTLTEMIESGNSLPDLFTFNSVIGAYGNSGRLEKMEKWYDEFQLMGIDPDIKTFNILIKSY
GKEGMYEKINSVMKFMNKRFYSPTIVTYNIIIETFGKAGNIEKMDEYFKIMKHQGMKPNAITYC
SLVSAYSKAGLIMKVDSILRHVENSDVVLDTTFFNCIIHAYGQAGDIEKMTELFVKMSERECKP
DNITFATMIQAYIAQGMTEAAQELENKILGANTTSGTKMIEA

### Similar gene clusters

### NC_065577 - Cluster 62 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_065577 - Gene Cluster 62. Type = cyclopeptide. Location: 17864569 - 20822019 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

No repeats detected in this cluster.

### Similar gene clusters

### NC_065577 - Cluster 63 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_065577 - Gene Cluster 63. Type = cyclopeptide. Location: 29769063 - 31083110 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NC_065577 - Cluster 64 - Putative

### Gene cluster description

Download cluster GenBank file
NC_065577 - Gene Cluster 64. Type = putative. Location: 33840507 - 34121947 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065577 - Cluster 65 - Putative

### Gene cluster description

Download cluster GenBank file
NC_065577 - Gene Cluster 65. Type = putative. Location: 36260285 - 36515762 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters