LOCUS NW_018927741 2579 bp DNA UNK 01-JAN-1980 DEFINITION Prunus avium cultivar Satonishiki unplaced genomic scaffold, PAV_r1.0 BDGV01006501.1, whole genome shotgun sequence. ACCESSION NW_018927741 VERSION NW_018927741.1 KEYWORDS . SOURCE . ORGANISM . . FEATURES Location/Qualifiers source 1..2579 /organism="Prunus avium" /mol_type="genomic DNA" /cultivar="Satonishiki" /db_xref="taxon:42229" /chromosome="Unknown" cluster 1..2579 /note="Cluster number: 34" /note="Detection rule(s) for this cluster type: plants/cyclopeptide: (BURP);" /cutoff=6949 /extension=27799 /product="cyclopeptide" gene 7..1507 /gene="LOC110747455" /note="Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:110747455" mRNA join(7..90,265..385,555..1507) /gene="LOC110747455" /product="BURP domain protein RD22-like, transcript variant X1" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns" /transcript_id="XM_021947626.1" /db_xref="GeneID:110747455" mRNA join(7..90,265..379,555..1507) /gene="LOC110747455" /product="BURP domain protein RD22-like, transcript variant X2" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns" /transcript_id="XM_021947627.1" /db_xref="GeneID:110747455" CDS join(52..90,265..385,555..1441) /gene="LOC110747455" /note="Derived by automated computational analysis using gene prediction method: Gnomon." /codon_start=1 /product="BURP domain protein RD22-like isoform X1" /protein_id="XP_021803318.1" /db_xref="GeneID:110747455" /translation="MGFHLPLIFAFLSLAALALANHAAQPAPQLYWNSVLPNTQMPRAI SELLHPGLYSTNEEKSTNIMNAVGNGKPTDHKVKPDDIFVQESRINYGGPSPSDKPDDI FLPATRIIYGPPPSDNQLHYKNVAIFFLEKDMRPGATMNFQFPRNSNTATFLPRESAQS IPFSSNKLSEIFNHFSVKPTSVEAKTIKKTIEECEAPGIKGEEKYCATSLESMVDFSTS KLRTRNVQAIPTEVLEKGATMSMHKYTTMPGLKKLAGDKVVVCHKQNYPYAVFFCHAIK QTAAYVLSLKGDDGEKVKAVTICHLDTSEWNPKHLAFQILKVKPGTIPICHFLPTDQIV WVPNHKTA" /domain_record="plants/BURP (E-value: 1.9e-85, bitscore: 284.1, seeds: 101)" /sec_met="Type: cyclopeptide" /sec_met="Domains detected: BURP (E-value: 1.9e-85, bitscore: 284.1, seeds: 101)" /sec_met="Kind: biosynthetic" /sec_met="Percentage identity: LOC11074_1271=99.138" /kmer_dict="{'MGF': [0], 'GFH': [1], 'FHL': [2], 'HLP': [3], 'LPL': [4], 'PLI': [5], 'LIF': [6], 'IFA': [7], 'FAF': [8], 'AFL': [9], 'FLS': [10], 'LSL': [11, 287], 'SLA': [12], 'LAA': [13], 'AAL': [14], 'ALA': [15, 17], 'LAL': [16], 'LAN': [18], 'ANH': [19], 'NHA': [20], 'HAA': [21], 'AAQ': [22], 'AQP': [23], 'QPA': [24], 'PAP': [25], 'APQ': [26], 'PQL': [27], 'QLY': [28], 'LYW': [29], 'YWN': [30], 'WNS': [31], 'NSV': [32], 'SVL': [33], 'VLP': [34], 'LPN': [35], 'PNT': [36], 'NTQ': [37], 'TQM': [38], 'QMP': [39], 'MPR': [40], 'PRA': [41], 'RAI': [42], 'AIS': [43], 'ISE': [44], 'SEL': [45], 'ELL': [46], 'LLH': [47], 'LHP': [48], 'HPG': [49], 'PGL': [50, 251], 'GLY': [51], 'LYS': [52], 'YST': [53], 'STN': [54, 60], 'TNE': [55], 'NEE': [56], 'EEK': [57, 204], 'EKS': [58], 'KST': [59], 'TNI': [61], 'NIM': [62], 'IMN': [63], 'MNA': [64], 'NAV': [65], 'AVG': [66], 'VGN': [67], 'GNG': [68], 'NGK': [69], 'GKP': [70], 'KPT': [71, 180], 'PTD': [72, 334], 'TDH': [73], 'DHK': [74], 'HKV': [75], 'KVK': [76, 296, 321], 'VKP': [77, 179, 322], 'KPD': [78, 99], 'PDD': [79, 100], 'DDI': [80, 101], 'DIF': [81, 102], 'IFV': [82], 'FVQ': [83], 'VQE': [84], 'QES': [85], 'ESR': [86], 'SRI': [87], 'RIN': [88], 'INY': [89], 'NYG': [90], 'YGG': [91], 'GGP': [92], 'GPS': [93], 'PSP': [94], 'SPS': [95], 'PSD': [96, 116], 'SDK': [97], 'DKP': [98], 'IFL': [103], 'FLP': [104, 154, 332], 'LPA': [105], 'PAT': [106], 'ATR': [107], 'TRI': [108], 'RII': [109], 'IIY': [110], 'IYG': [111], 'YGP': [112], 'GPP': [113], 'PPP': [114], 'PPS': [115], 'SDN': [117], 'DNQ': [118], 'NQL': [119], 'QLH': [120], 'LHY': [121], 'HYK': [122], 'YKN': [123], 'KNV': [124], 'NVA': [125], 'VAI': [126], 'AIF': [127], 'IFF': [128], 'FFL': [129], 'FLE': [130], 'LEK': [131, 236], 'EKD': [132], 'KDM': [133], 'DMR': [134], 'MRP': [135], 'RPG': [136], 'PGA': [137], 'GAT': [138, 239], 'ATM': [139, 240], 'TMN': [140], 'MNF': [141], 'NFQ': [142], 'FQF': [143], 'QFP': [144], 'FPR': [145], 'PRN': [146], 'RNS': [147], 'NSN': [148], 'SNT': [149], 'NTA': [150], 'TAT': [151], 'ATF': [152], 'TFL': [153], 'LPR': [155], 'PRE': [156], 'RES': [157], 'ESA': [158], 'SAQ': [159], 'AQS': [160], 'QSI': [161], 'SIP': [162], 'IPF': [163], 'PFS': [164], 'FSS': [165], 'SSN': [166], 'SNK': [167], 'NKL': [168], 'KLS': [169], 'LSE': [170], 'SEI': [171], 'EIF': [172], 'IFN': [173], 'FNH': [174], 'NHF': [175], 'HFS': [176], 'FSV': [177], 'SVK': [178], 'PTS': [181], 'TSV': [182], 'SVE': [183], 'VEA': [184], 'EAK': [185], 'AKT': [186], 'KTI': [187, 191], 'TIK': [188], 'IKK': [189], 'KKT': [190], 'TIE': [192], 'IEE': [193], 'EEC': [194], 'ECE': [195], 'CEA': [196], 'EAP': [197], 'APG': [198], 'PGI': [199], 'GIK': [200], 'IKG': [201], 'KGE': [202], 'GEE': [203], 'EKY': [205], 'KYC': [206], 'YCA': [207], 'CAT': [208], 'ATS': [209], 'TSL': [210], 'SLE': [211], 'LES': [212], 'ESM': [213], 'SMV': [214], 'MVD': [215], 'VDF': [216], 'DFS': [217], 'FST': [218], 'STS': [219], 'TSK': [220], 'SKL': [221], 'KLR': [222], 'LRT': [223], 'RTR': [224], 'TRN': [225], 'RNV': [226], 'NVQ': [227], 'VQA': [228], 'QAI': [229], 'AIP': [230], 'IPT': [231], 'PTE': [232], 'TEV': [233], 'EVL': [234], 'VLE': [235], 'EKG': [237], 'KGA': [238], 'TMS': [241], 'MSM': [242], 'SMH': [243], 'MHK': [244], 'HKY': [245], 'KYT': [246], 'YTT': [247], 'TTM': [248], 'TMP': [249], 'MPG': [250], 'GLK': [252], 'LKK': [253], 'KKL': [254], 'KLA': [255], 'LAG': [256], 'AGD': [257], 'GDK': [258], 'DKV': [259], 'KVV': [260], 'VVV': [261], 'VVC': [262], 'VCH': [263], 'CHK': [264], 'HKQ': [265], 'KQN': [266], 'QNY': [267], 'NYP': [268], 'YPY': [269], 'PYA': [270], 'YAV': [271], 'AVF': [272], 'VFF': [273], 'FFC': [274], 'FCH': [275], 'CHA': [276], 'HAI': [277], 'AIK': [278], 'IKQ': [279], 'KQT': [280], 'QTA': [281], 'TAA': [282], 'AAY': [283], 'AYV': [284], 'YVL': [285], 'VLS': [286], 'SLK': [288], 'LKG': [289], 'KGD': [290], 'GDD': [291], 'DDG': [292], 'DGE': [293], 'GEK': [294], 'EKV': [295], 'VKA': [297], 'KAV': [298], 'AVT': [299], 'VTI': [300], 'TIC': [301], 'ICH': [302, 329], 'CHL': [303], 'HLD': [304], 'LDT': [305], 'DTS': [306], 'TSE': [307], 'SEW': [308], 'EWN': [309], 'WNP': [310], 'NPK': [311], 'PKH': [312], 'KHL': [313], 'HLA': [314], 'LAF': [315], 'AFQ': [316], 'FQI': [317], 'QIL': [318], 'ILK': [319], 'LKV': [320], 'KPG': [323], 'PGT': [324], 'GTI': [325], 'TIP': [326], 'IPI': [327], 'PIC': [328], 'CHF': [330], 'HFL': [331], 'LPT': [333], 'TDQ': [335], 'DQI': [336], 'QIV': [337], 'IVW': [338], 'VWV': [339], 'WVP': [340], 'VPN': [341], 'PNH': [342], 'NHK': [343], 'HKT': [344]}" /ripp_evidence="{}" /top_kmer_word="KVK" /top_kmer_hits=76 /top_kmer_hits=296 /top_kmer_hits=321 /table="KVKP" /table="KVKA" /table="KVKP" /pattern="KVK[PA]" /has_repeat=True CDS join(52..90,265..379,555..1441) /gene="LOC110747455" /note="Derived by automated computational analysis using gene prediction method: Gnomon." /codon_start=1 /product="LOC11074_1271" /protein_id="XP_021803319.1" /db_xref="GeneID:110747455" /translation="MGFHLPLIFAFLSLAALALANHAAQPAPQLYWNSVLPNTQMPRAI SELLHPDSTNEEKSTNIMNAVGNGKPTDHKVKPDDIFVQESRINYGGPSPSDKPDDIFL PATRIIYGPPPSDNQLHYKNVAIFFLEKDMRPGATMNFQFPRNSNTATFLPRESAQSIP FSSNKLSEIFNHFSVKPTSVEAKTIKKTIEECEAPGIKGEEKYCATSLESMVDFSTSKL RTRNVQAIPTEVLEKGATMSMHKYTTMPGLKKLAGDKVVVCHKQNYPYAVFFCHAIKQT AAYVLSLKGDDGEKVKAVTICHLDTSEWNPKHLAFQILKVKPGTIPICHFLPTDQIVWV PNHKTA" /locus_tag="LOC11074_1271" /domain_record="plants/BURP (E-value: 1.8e-85, bitscore: 284.1, seeds: 101)" /sec_met="Type: cyclopeptide" /sec_met="Domains detected: BURP (E-value: 1.8e-85, bitscore: 284.1, seeds: 101)" /sec_met="Kind: biosynthetic" /sec_met="Percentage identity: LOC110747455=99.138" /kmer_dict="{'MGF': [0], 'GFH': [1], 'FHL': [2], 'HLP': [3], 'LPL': [4], 'PLI': [5], 'LIF': [6], 'IFA': [7], 'FAF': [8], 'AFL': [9], 'FLS': [10], 'LSL': [11, 285], 'SLA': [12], 'LAA': [13], 'AAL': [14], 'ALA': [15, 17], 'LAL': [16], 'LAN': [18], 'ANH': [19], 'NHA': [20], 'HAA': [21], 'AAQ': [22], 'AQP': [23], 'QPA': [24], 'PAP': [25], 'APQ': [26], 'PQL': [27], 'QLY': [28], 'LYW': [29], 'YWN': [30], 'WNS': [31], 'NSV': [32], 'SVL': [33], 'VLP': [34], 'LPN': [35], 'PNT': [36], 'NTQ': [37], 'TQM': [38], 'QMP': [39], 'MPR': [40], 'PRA': [41], 'RAI': [42], 'AIS': [43], 'ISE': [44], 'SEL': [45], 'ELL': [46], 'LLH': [47], 'LHP': [48], 'HPD': [49], 'PDS': [50], 'DST': [51], 'STN': [52, 58], 'TNE': [53], 'NEE': [54], 'EEK': [55, 202], 'EKS': [56], 'KST': [57], 'TNI': [59], 'NIM': [60], 'IMN': [61], 'MNA': [62], 'NAV': [63], 'AVG': [64], 'VGN': [65], 'GNG': [66], 'NGK': [67], 'GKP': [68], 'KPT': [69, 178], 'PTD': [70, 332], 'TDH': [71], 'DHK': [72], 'HKV': [73], 'KVK': [74, 294, 319], 'VKP': [75, 177, 320], 'KPD': [76, 97], 'PDD': [77, 98], 'DDI': [78, 99], 'DIF': [79, 100], 'IFV': [80], 'FVQ': [81], 'VQE': [82], 'QES': [83], 'ESR': [84], 'SRI': [85], 'RIN': [86], 'INY': [87], 'NYG': [88], 'YGG': [89], 'GGP': [90], 'GPS': [91], 'PSP': [92], 'SPS': [93], 'PSD': [94, 114], 'SDK': [95], 'DKP': [96], 'IFL': [101], 'FLP': [102, 152, 330], 'LPA': [103], 'PAT': [104], 'ATR': [105], 'TRI': [106], 'RII': [107], 'IIY': [108], 'IYG': [109], 'YGP': [110], 'GPP': [111], 'PPP': [112], 'PPS': [113], 'SDN': [115], 'DNQ': [116], 'NQL': [117], 'QLH': [118], 'LHY': [119], 'HYK': [120], 'YKN': [121], 'KNV': [122], 'NVA': [123], 'VAI': [124], 'AIF': [125], 'IFF': [126], 'FFL': [127], 'FLE': [128], 'LEK': [129, 234], 'EKD': [130], 'KDM': [131], 'DMR': [132], 'MRP': [133], 'RPG': [134], 'PGA': [135], 'GAT': [136, 237], 'ATM': [137, 238], 'TMN': [138], 'MNF': [139], 'NFQ': [140], 'FQF': [141], 'QFP': [142], 'FPR': [143], 'PRN': [144], 'RNS': [145], 'NSN': [146], 'SNT': [147], 'NTA': [148], 'TAT': [149], 'ATF': [150], 'TFL': [151], 'LPR': [153], 'PRE': [154], 'RES': [155], 'ESA': [156], 'SAQ': [157], 'AQS': [158], 'QSI': [159], 'SIP': [160], 'IPF': [161], 'PFS': [162], 'FSS': [163], 'SSN': [164], 'SNK': [165], 'NKL': [166], 'KLS': [167], 'LSE': [168], 'SEI': [169], 'EIF': [170], 'IFN': [171], 'FNH': [172], 'NHF': [173], 'HFS': [174], 'FSV': [175], 'SVK': [176], 'PTS': [179], 'TSV': [180], 'SVE': [181], 'VEA': [182], 'EAK': [183], 'AKT': [184], 'KTI': [185, 189], 'TIK': [186], 'IKK': [187], 'KKT': [188], 'TIE': [190], 'IEE': [191], 'EEC': [192], 'ECE': [193], 'CEA': [194], 'EAP': [195], 'APG': [196], 'PGI': [197], 'GIK': [198], 'IKG': [199], 'KGE': [200], 'GEE': [201], 'EKY': [203], 'KYC': [204], 'YCA': [205], 'CAT': [206], 'ATS': [207], 'TSL': [208], 'SLE': [209], 'LES': [210], 'ESM': [211], 'SMV': [212], 'MVD': [213], 'VDF': [214], 'DFS': [215], 'FST': [216], 'STS': [217], 'TSK': [218], 'SKL': [219], 'KLR': [220], 'LRT': [221], 'RTR': [222], 'TRN': [223], 'RNV': [224], 'NVQ': [225], 'VQA': [226], 'QAI': [227], 'AIP': [228], 'IPT': [229], 'PTE': [230], 'TEV': [231], 'EVL': [232], 'VLE': [233], 'EKG': [235], 'KGA': [236], 'TMS': [239], 'MSM': [240], 'SMH': [241], 'MHK': [242], 'HKY': [243], 'KYT': [244], 'YTT': [245], 'TTM': [246], 'TMP': [247], 'MPG': [248], 'PGL': [249], 'GLK': [250], 'LKK': [251], 'KKL': [252], 'KLA': [253], 'LAG': [254], 'AGD': [255], 'GDK': [256], 'DKV': [257], 'KVV': [258], 'VVV': [259], 'VVC': [260], 'VCH': [261], 'CHK': [262], 'HKQ': [263], 'KQN': [264], 'QNY': [265], 'NYP': [266], 'YPY': [267], 'PYA': [268], 'YAV': [269], 'AVF': [270], 'VFF': [271], 'FFC': [272], 'FCH': [273], 'CHA': [274], 'HAI': [275], 'AIK': [276], 'IKQ': [277], 'KQT': [278], 'QTA': [279], 'TAA': [280], 'AAY': [281], 'AYV': [282], 'YVL': [283], 'VLS': [284], 'SLK': [286], 'LKG': [287], 'KGD': [288], 'GDD': [289], 'DDG': [290], 'DGE': [291], 'GEK': [292], 'EKV': [293], 'VKA': [295], 'KAV': [296], 'AVT': [297], 'VTI': [298], 'TIC': [299], 'ICH': [300, 327], 'CHL': [301], 'HLD': [302], 'LDT': [303], 'DTS': [304], 'TSE': [305], 'SEW': [306], 'EWN': [307], 'WNP': [308], 'NPK': [309], 'PKH': [310], 'KHL': [311], 'HLA': [312], 'LAF': [313], 'AFQ': [314], 'FQI': [315], 'QIL': [316], 'ILK': [317], 'LKV': [318], 'KPG': [321], 'PGT': [322], 'GTI': [323], 'TIP': [324], 'IPI': [325], 'PIC': [326], 'CHF': [328], 'HFL': [329], 'LPT': [331], 'TDQ': [333], 'DQI': [334], 'QIV': [335], 'IVW': [336], 'VWV': [337], 'WVP': [338], 'VPN': [339], 'PNH': [340], 'NHK': [341], 'HKT': [342]}" /ripp_evidence="{}" /top_kmer_word="KVK" /top_kmer_hits=74 /top_kmer_hits=294 /top_kmer_hits=319 /table="KVKP" /table="KVKA" /table="KVKP" /pattern="KVK[PA]" /has_repeat=True ORIGIN 1 cttgcttcat atccactagc tacatctgtt gccaagttaa tttcagtcct aatggggttt 61 catctcccac tcatctttgc ttttctcagt gtaagctctg caatttgatt aacttttcca 121 ttatctctca ttgtactcta tatgaaggaa agttttgtgt tcatcctata attctctccg 181 attttatgta gtacgtaagt gtcgtccact aattaattac actttgtgat ttgattttaa 241 ttagagttcg aattaatgtt gcagctagca gcactggcac tggcaaacca tgctgctcaa 301 ccagcacctc aactttactg gaactccgtc ctgccaaaca cacagatgcc aagagctatc 361 agtgaacttc ttcatcctgg tttgtgttaa gcactttaga attttctacc tgccatttta 421 ctaaaattta agaacataca tagagtaatt atagtatggt actagagtac gtacggcaca 481 tattcacaaa tgtactcact cttcaatcgg ctgatcactt attttccatt atgacgttga 541 tatataattt gcagactcca caaatgaaga aaagagcaca aatatcatga atgctgttgg 601 gaatggaaag ccaactgacc acaaggtcaa gcctgatgat atattcgtgc aagaaagcag 661 aatcaactat ggaggtcctt ctccgtctga caagcctgat gatatattct tgccagcaac 721 cagaatcatc tatggtcctc ctccatctga caatcaactc cattataaaa acgtagctat 781 tttcttcttg gagaaggaca tgcgccctgg cgcaacaatg aacttccaat tccctagaaa 841 ttcaaacacg gctactttcc tgccacgcga aagtgctcaa tcgatcccct tctcctctaa 901 caaactatca gaaattttca accatttttc agtgaagcca acatctgtgg aagccaaaac 961 aattaagaaa acaatcgaag agtgtgaagc tccaggcatt aagggagagg aaaaatattg 1021 cgccacatct ttagaatcaa tggttgattt tagcacttcg aagcttagaa caagaaacgt 1081 tcaagcaatc ccgacggagg tattggaaaa aggagccacc atgtccatgc acaagtatac 1141 aacaatgccg ggactgaaga agttggcagg tgacaaagtc gttgtgtgtc ataagcagaa 1201 ctatccctat gctgtgtttt tctgccatgc aataaaacaa acagcagctt atgttctctc 1261 cctgaaaggc gatgatgggg agaaggttaa agcagtaacc atctgccatc tagacacatc 1321 agaatggaac ccaaagcatt tggccttcca aatcctcaaa gttaagcccg gaaccattcc 1381 catctgccat ttccttccca ctgatcagat tgtctgggtt ccgaaccaca aaactgcatg 1441 atcatcactt agcaccgtac gtataataag cttgcaaccc tgtataatta tctccctact 1501 tatttctgcc tcttcatgtg gtgtaagata tatgatgaga gtttttggga ttagtgatcg 1561 ggttgcctaa aaaacacaga ttacagaaac tgcttgaaat taacccgatc atgttttctc 1621 ttgtaactat gtagacttca acttgtactc ataaagcatg ctatatttat gaagagatat 1681 taatctatat atatttttta tacatgcttt ggctttgggt gttgaattgt tacgtttgga 1741 atgggctgct aatgcatgta gttagagaag ccttcattta tatcaaagtc ctcaaactat 1801 caagaattaa tgtatccaga aacataccaa gacgcaaaac aacatatttt ccatgctctg 1861 tctgtaacac caaagcaaac ttcctttatc acatcattta aaggatcaaa ttccagtact 1921 aagtctaaat tctatgttac ataaatttga gagaaccata aatatataac ctaaagtagc 1981 accacgtagt acagtagtac cacgtggcac tgagagcttg gtactacgaa ctaatgataa 2041 attctatgtt acataaattt gaattaatgc tttttccttt gttttgtttt tggtccaaaa 2101 tactatacta tatttggtat ttcctactat actatttaag tttgcaaact catatggcat 2161 atgcaaacac aattagaaat gctacaacag aagcaagatc aatctcacta tatgccttct 2221 aaacaaacaa acaaacaaat aaaacaagca tattaattgc tttaatcact ctactaacat 2281 caacacagca cacttagttt actaacagat aatacagaaa ggaaaaaaaa ggaccaatag 2341 gggagaaaat cgtgaactaa ggagagacta atacttctgg ttcttagaat gcataacaga 2401 aataatagag cacactgctt gaatgcaagt cagtattagg agcaaaacag ctgcactgac 2461 agaaatagtt gcccaaggtg tattgaaata atgttgcgtc aaatttgcct tccatttgtt 2521 ccaaggcttt ctgcagtagc tattgaggcg ctcagaaaga gtagcaaagt agaagcttt //