NC_065534.1 - 50 clusters - antiSMASH results

Plant Specialized Metabolite Analysis
Version 2.0

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### Identified secondary metabolite clusters

Cluster | Type | From | To | Size (kb) | Core domains | Product/substrate predicted by subgroup | Most similar known cluster | MIBiG BGC-ID
--- | --- | --- | --- | --- | --- | --- | --- | ---
The following clusters are from record NC_065534.1:
Cluster 1 | Saccharide | 6786422 | 8131941 | 1345.52 | AMP-binding, Amino_oxidase, Glyco_hydro_1, Lipoxygenase, UDPGT_2 | - | - | -
Cluster 2 | Cyclopeptide | 18159039 | 18882722 | 723.68 | BURP | - | - | -
Cluster 3 | Fatty_acid | 29042841 | 29608647 | 565.81 | FA_hydroxylase, adh_short, adh_short_C2 | - | - | -
The following clusters are from record NC_065535.1:
Cluster 4 | Saccharide | 14862192 | 15054933 | 192.74 | Glycos_transf_2, Transferase, p450 | - | - | -
Cluster 5 | Saccharide-Fatty_acid | 26121267 | 26669693 | 548.43 | ADH_N, ADH_zinc_N, FA_desaturase_2, Peptidase_S10, UDPGT_2 | - | - | -
Cluster 6 | Lignan | 32823561 | 33032434 | 208.87 | Aminotran_1_2, Dirigent, Epimerase | - | - | -
Cluster 7 | Fatty_acid | 36830099 | 37080945 | 250.85 | 2OG-FeII_Oxy, DIOX_N, FA_hydroxylase, p450 | - | - | -
Cluster 8 | Saccharide | 60340650 | 60615683 | 275.03 | AMP-binding, Amino_oxidase, Glycos_transf_1, SQS_PSY, UDPGT_2 | - | - | -
Cluster 9 | Fatty_acid | 80865025 | 81053783 | 188.76 | DIOX_N, ECH_2, Transferase | - | - | -
The following clusters are from record NC_065536.1:
Cluster 10 | Putative | 51456915 | 52198624 | 741.71 | Transferase, p450 | - | arabidiol-baruol (6% of genes show similarity) | BGC0001313.3_c1
Cluster 11 | Alkaloid | 54863178 | 55195437 | 332.26 | Aminotran_1_2, Cu_amine_oxid, MatE, UbiA | - | - | -
Cluster 12 | Cyclopeptide | 56116042 | 57785052 | 1669.01 | BURP | - | momilactone B (28% of genes show similarity) | BGC0000671.3_c1
The following clusters are from record NC_065537.1:
Cluster 13 | Saccharide | 84094542 | 84431528 | 336.99 | Glyco_hydro_1, UDPGT_2 | *saccharide, small phenolic-2 | - | -
The following clusters are from record NC_065538.1:
Cluster 14 | Terpene | 3771300 | 3941185 | 169.88 | Lipoxygenase, Prenyltrans, p450 | - | - | -
Cluster 15 | Transporter_associated | 24529537 | 25095794 | 566.26 | 2OG-FeII_Oxy, ABC2_membrane, ABC_tran, Aminotran_1_2, DIOX_N, p450 | - | - | -
Cluster 16 | Phenolamide | 62513685 | 62637370 | 123.69 | Aminotran_1_2, Pyridoxal_deC, Transferase | - | - | -
Cluster 17 | Alkaloid | 66622489 | 67359978 | 737.49 | BBE, FAD_binding_4, Methyltransf_11 | - | - | -
Cluster 18 | Terpene | 79344543 | 79895040 | 550.50 | Epimerase, Terpene_synth, Terpene_synth_C | - | - | -
Cluster 19 | Saccharide | 84707041 | 84861302 | 154.26 | GMC_oxred_C, GMC_oxred_N, Glycos_transf_2, UDPGT_2 | - | - | -
Cluster 20 | Terpene-Saccharide | 86669316 | 87536970 | 867.65 | Epimerase, Glyco_hydro_1, Prenyltrans, SQHop_cyclase_C, SQHop_cyclase_N, Transferase, p450 | beta-amyrin-5, triterpene-5, Cycloartenol-2 | yossoside I/yossoside II/yossoside III/yossoside IV/yossos... (100% of genes show similarity) | BGC0002402.2_c1
The following clusters are from record NC_065539.1:
Cluster 21 | Saccharide | 18625887 | 18767581 | 141.69 | Glycos_transf_1, UDPGT_2 | flavonoid, small phenolic | - | -
Cluster 22 | Saccharide | 42624734 | 42751251 | 126.52 | 2OG-FeII_Oxy, DIOX_N, Glyco_hydro_1, Peptidase_S10 | - | - | -
Cluster 23 | Transporter_associated | 52681357 | 52925846 | 244.49 | Acetyltransf_1, LTP_2, p450 | - | - | -
The following clusters are from record NC_065540.1:
Cluster 24 | Putative | 7360498 | 7527730 | 167.23 | 2OG-FeII_Oxy, DIOX_N, Dimerisation, Methyltransf_2, Peptidase_S10, p450 | - | - | -
Cluster 25 | Saccharide | 34727761 | 35293114 | 565.35 | UDPGT_2, p450 | - | cucurbitacin C (33% of genes show similarity) | BGC0001315.3_c1
Cluster 26 | Alkaloid-Phenolamide | 35812792 | 35953745 | 140.95 | Methyltransf_11, Methyltransf_7, Pyridoxal_deC, Transferase | - | - | -
Cluster 27 | Putative | 37870101 | 38335652 | 465.55 | HMGL-like, Peptidase_S10, Transferase, adh_short | - | - | -
The following clusters are from record NC_065541.1:
Cluster 28 | Terpene-Saccharide | 15150384 | 15711951 | 561.57 | Epimerase, Glyco_hydro_1, Methyltransf_11, Terpene_synth, Terpene_synth_C | - | - | -
Cluster 29 | Terpene-Alkaloid | 19518372 | 19995729 | 477.36 | Amino_oxidase, Bet_v_1, Methyltransf_11, Prenyltrans, SQHop_cyclase_C, SQHop_cyclase_N, Terpene_synth, Terpene_synth_C | lupeol | - | -
Cluster 30 | Saccharide | 20304433 | 20558024 | 253.59 | Glyco_hydro_1, adh_short, adh_short_C2 | - | - | -
Cluster 31 | Lignan-Saccharide | 34425034 | 35100289 | 675.25 | Cellulose_synt, Dirigent, p450 | - | - | -
Cluster 32 | Putative | 54108645 | 54573919 | 465.27 | ADH_N, Abhydrolase_3, p450 | - | - | -
Cluster 33 | Putative | 56295022 | 56908444 | 613.42 | Amino_oxidase, Peptidase_S10, Transferase, UbiA | - | - | -
Cluster 34 | Fatty_acid | 65484481 | 65619458 | 134.98 | 2OG-FeII_Oxy, DIOX_N, FA_desaturase | - | - | -
The following clusters are from record NC_065542.1:
Cluster 35 | Putative | 15910127 | 16059704 | 149.58 | Methyltransf_11, p450 | - | casbene/5a-hydroxy-casbene/5-keto-casbene/5-keto-7,8-epoxy... (11% of genes show similarity) | BGC0002393.2_c1
Cluster 36 | Saccharide | 17321796 | 17478480 | 156.68 | Aminotran_1_2, Glycos_transf_2, SE | - | - | -
Cluster 37 | Alkaloid-Saccharide | 24819436 | 24887398 | 67.96 | AMP-binding, BBE, Cellulose_synt, FAD_binding_4 | - | - | -
The following clusters are from record NC_065543.1:
Cluster 38 | Fatty_acid | 40943513 | 41138250 | 194.74 | 2OG-FeII_Oxy, DIOX_N, FA_desaturase_2, Methyltransf_11, p450 | - | - | -
Cluster 39 | Cyclopeptide | 45167033 | 45809661 | 642.63 | BURP | - | - | -
Cluster 40 | Saccharide | 51341097 | 51517369 | 176.27 | AMP-binding, Glyco_hydro_1 | - | - | -
The following clusters are from record NC_065544.1:
Cluster 41 | Saccharide-Polyketide | 7940629 | 8331729 | 391.10 | Chal_sti_synt_C, FAE1_CUT1_RppA, Glycos_transf_1, p450 | - | QS-21 (11% of genes show similarity) | BGCMANUAL2.1_c1
Cluster 42 | Cyclopeptide | 9781704 | 11174490 | 1392.79 | BURP | - | - | -
Cluster 43 | Cyclopeptide | 18110417 | 19371484 | 1261.07 | BURP | - | - | -
Cluster 44 | Cyclopeptide | 18720474 | 19235053 | 514.58 | BURP | - | - | -
Cluster 45 | Transporter_associated-Saccharide | 21788195 | 23000262 | 1212.07 | ABC2_membrane, ABC_tran, DAHP_synth_2, UDPGT_2, UbiA, p450 | cyanogenic glucoside-8, monoterpenoid-8 | - | -
Cluster 46 | Cyclopeptide | 44064478 | 44857511 | 793.03 | BURP | - | - | -
The following clusters are from record NC_065545.1:
Cluster 47 | Cyclopeptide | 15579494 | 16395498 | 816.00 | BURP | - | - | -
Cluster 48 | Saccharide | 16620065 | 16734829 | 114.76 | Epimerase, Glycos_transf_2, UDPGT_2 | - | - | -
Cluster 49 | Transporter_associated-Alkaloid | 30711224 | 31262929 | 551.71 | Cu_amine_oxid, Epimerase, LTP_2, p450 | - | - | -
Cluster 50 | Saccharide | 42810213 | 43250549 | 440.34 | AMP-binding, Epimerase, Methyltransf_11, UDPGT_2 | cyanogenic glucoside, monoterpenoid | - | -

### NC_065534 - Cluster 1 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_065534 - Gene Cluster 1. Type = saccharide. Location: 6786422 - 8131941 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065534 - Cluster 2 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_065534 - Gene Cluster 2. Type = cyclopeptide. Location: 18159039 - 18882722 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NC_065534 - Cluster 3 - Fatty_acid

### Gene cluster description

Download cluster GenBank file
NC_065534 - Gene Cluster 3. Type = fatty_acid. Location: 29042841 - 29608647 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065535 - Cluster 4 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_065535 - Gene Cluster 4. Type = saccharide. Location: 14862192 - 15054933 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065535 - Cluster 5 - Saccharide-fatty_acid

### Gene cluster description

Download cluster GenBank file
NC_065535 - Gene Cluster 5. Type = saccharide-fatty_acid. Location: 26121267 - 26669693 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065535 - Cluster 6 - Lignan

### Gene cluster description

Download cluster GenBank file
NC_065535 - Gene Cluster 6. Type = lignan. Location: 32823561 - 33032434 nt. Click on genes for more information.
Show pHMM detection rules used
plants/lignan: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Dirigent]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065535 - Cluster 7 - Fatty_acid

### Gene cluster description

Download cluster GenBank file
NC_065535 - Gene Cluster 7. Type = fatty_acid. Location: 36830099 - 37080945 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065535 - Cluster 8 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_065535 - Gene Cluster 8. Type = saccharide. Location: 60340650 - 60615683 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065535 - Cluster 9 - Fatty_acid

### Gene cluster description

Download cluster GenBank file
NC_065535 - Gene Cluster 9. Type = fatty_acid. Location: 80865025 - 81053783 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065536 - Cluster 10 - Putative

### Gene cluster description

Download cluster GenBank file
NC_065536 - Gene Cluster 10. Type = putative. Location: 51456915 - 52198624 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### Similar known gene clusters

### NC_065536 - Cluster 11 - Alkaloid

### Gene cluster description

Download cluster GenBank file
NC_065536 - Gene Cluster 11. Type = alkaloid. Location: 54863178 - 55195437 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065536 - Cluster 12 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_065536 - Gene Cluster 12. Type = cyclopeptide. Location: 56116042 - 57785052 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC126718480
Repeat occurs 5 times in a sequence of 547 amino acids
Location between 56333494 and 56338892
Coverage of 6.4 %
Instances:
KPKSPPH | KPKSPPH | KPKSPPH | KPKAPPL | KPKEEFP
pattern: KPK[ASE][PE][PF][LHP]
MMRGLSLRSLTFMLFIAFILCSSNFETCNARRGKHWRHSRGISASLFKKKGKSQGSSNNHHSG
GSKPKSPPHKASPLPTPKPKSPPHKASPLPTPKPKSPPHSHKPKAPPLPTPKPKEEFPSNPPAG
HSTTFNVLDFGAKGDGSTDDTKAFQAAWAAACKIEASMIVVPAEYEFLVGPISFSGPYCQANIV
FQLDGTIIAPTNSNAWGKGLLQWLEFTKLRGITIQGNGIIDGRGSVWWQDAPFDDPIDDEIKLL
VPLNSSVEENPPMPVRSNLGRIMPSIKPTALRFYGSFNVTVTGITIQSSPQCHLKFDYCTGVLV
HDISVSSPGDSPNTDGIHLQGSKDVLIYSCNLACGDDCVSIQTGCSNVYIHNVNCGPGHGISIG
SLGKDNTKACVSNITVRDVIMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVEFPIVIDQYYC
DKSKCSNQTSAVALSGINYERIRGTYTVKPVHFACSDSLPCVDVSLTAIQLKPMQEKYHMYDPF
CWQTFGELRTPTMPPIGCLQIGKPSSNRIQSDHDLC

Repeat found in LOC126718527
Repeat occurs 4 times in a sequence of 593 amino acids
Location between 57415404 and 57429473
Coverage of 5.4 %
Instances:
DDDDDDAP | DDDDDAPP | DDDDAPPE | DDDAPPEL |
pattern: DDD[DA][DAP][DAP][AEP][LPE]
MEEDRAKKRPLDLDWEKLLPNSSQNDDDDDDAPPELIVKSSTTTATMGSGDERHEDFEKWSDR
MLEEQIERKRRTCETMGPRMPDKGEKLRLTLKRIEDERERRKLARPQKLNSSYAYEGDGCEKPT
QSRSSGVSNGFREESTSSQANSGSTFASRLCQKMEENIICGETEAFKEELSVLSRCDRRKMTSK
EELSQSRRHRGRSSSKQWSSQRHNKLSKHALLNANKKRRASPTSSLHQNGEHWSSSFAKKLKVV
WLPLNLKDAFQVHPNGSRHKKEQTVVLIDEDESQSLIEEDESESLEITERVDNAECMKDAKITY
PSRDDPESIEICYVDINCLAPEGYLTSTIMNFYIRYIQLQASPTNRAMCDYHFFNTYFYNKLKE
AVSYKGSDKDTYFAKFRRWWKGVNIFQKAYVLIPIHEDLHWSLVIICIPDKEDETGPIILHLDS
LRLHSSRSIFENIKSFMKAEWTYLASEVAPLNLPIADKIWKHLPRRIEEKAIAVPQQKNDSDCG
LFVLFFMERFIEEAPERLKKKDLAMFGRQWFKPEEASGLRVKIRKILMLEFKKASDVNCDSESS
PFTKGDDPANIDHQTDSD

Repeat found in LOC126718527
Repeat occurs 4 times in a sequence of 594 amino acids
Location between 57415404 and 57429473
Coverage of 5.39 %
Instances:
DDDDDDAP | DDDDDAPP | DDDDAPPE | DDDAPPEL |
pattern: DDD[DA][DAP][DAP][AEP][LPE]
MEEDRAKKRPLDLDWEKLLPNSSQNDDDDDDAPPELIVKSSTTTATMGSGDERHEDFEKWSDR
MLEEQIERKRRTCETMGPRMPDKGEKLRLTLKRIEDERERRKLARPQKLNSSYAYEGDGCEKPT
QSRSSGVSNGFREESTSSQANSGSTFASRLCQKMEENQIICGETEAFKEELSVLSRCDRRKMTS
KEELSQSRRHRGRSSSKQWSSQRHNKLSKHALLNANKKRRASPTSSLHQNGEHWSSSFAKKLKV
VWLPLNLKDAFQVHPNGSRHKKEQTVVLIDEDESQSLIEEDESESLEITERVDNAECMKDAKIT
YPSRDDPESIEICYVDINCLAPEGYLTSTIMNFYIRYIQLQASPTNRAMCDYHFFNTYFYNKLK
EAVSYKGSDKDTYFAKFRRWWKGVNIFQKAYVLIPIHEDLHWSLVIICIPDKEDETGPIILHLD
SLRLHSSRSIFENIKSFMKAEWTYLASEVAPLNLPIADKIWKHLPRRIEEKAIAVPQQKNDSDC
GLFVLFFMERFIEEAPERLKKKDLAMFGRQWFKPEEASGLRVKIRKILMLEFKKASDVNCDSES
SPFTKGDDPANIDHQTDSD

Repeat found in LOC126718527
Repeat occurs 4 times in a sequence of 586 amino acids
Location between 57415404 and 57429473
Coverage of 5.46 %
Instances:
DDDDDDAP | DDDDDAPP | DDDDAPPE | DDDAPPEL |
pattern: DDD[DA][DAP][DAP][AEP][LPE]
MEEDRAKKRPLDLDWEKLLPNSSQNDDDDDDAPPELIVKSSTTTATMGSGDERHEDFEKWSDR
MLEEQIERKRRTCETMGPRMPDKGEKLRLTLKRIEDERERRKLARPQKLNSSYAYEGDGCEKPT
QSRSSGTVGVSNGFREESTSSQANSGSTFASRLCQKMEENIICGETEAFKEELSVLSRCDRRKM
TSKEELSQSRRHRGRSSSKQWSSQRHNKLSKHALLNANKKRRASPTSSLHQNGEHWSSSFAKKK
DAFQVHPNGSRHKKEQTVVLIDEDESQSLIEEDESESLEITERVDNAECMKDAKITYPSRDDPE
SIEICYVDINCLAPEGYLTSTIMNFYIRYIQLQASPTNRAMCDYHFFNTYFYNKLKEAVSYKGS
DKDTYFAKFRRWWKGVNIFQKAYVLIPIHEDLHWSLVIICIPDKEDETGPIILHLDSLRLHSSR
SIFENIKSFMKAEWTYLASEVAPLNLPIADKIWKHLPRRIEEKAIAVPQQKNDSDCGLFVLFFM
ERFIEEAPERLKKKDLAMFGRQWFKPEEASGLRVKIRKILMLEFKKASDVNCDSESSPFTKGDD
PANIDHQTDSD

Repeat found in LOC126718527
Repeat occurs 4 times in a sequence of 596 amino acids
Location between 57415404 and 57429473
Coverage of 5.37 %
Instances:
DDDDDDAP | DDDDDAPP | DDDDAPPE | DDDAPPEL |
pattern: DDD[DA][DAP][DAP][AEP][LPE]
MEEDRAKKRPLDLDWEKLLPNSSQNDDDDDDAPPELIVKSSTTTATMGSGDERHEDFEKWSDR
MLEEQIERKRRTCETMGPRMPDKGEKLRLTLKRIEDERERRKLARPQKLNSSYAYEGDGCEKPT
QSRSSGTVGVSNGFREESTSSQANSGSTFASRLCQKMEENIICGETEAFKEELSVLSRCDRRKM
TSKEELSQSRRHRGRSSSKQWSSQRHNKLSKHALLNANKKRRASPTSSLHQNGEHWSSSFAKKL
KVVWLPLNLKDAFQVHPNGSRHKKEQTVVLIDEDESQSLIEEDESESLEITERVDNAECMKDAK
ITYPSRDDPESIEICYVDINCLAPEGYLTSTIMNFYIRYIQLQASPTNRAMCDYHFFNTYFYNK
LKEAVSYKGSDKDTYFAKFRRWWKGVNIFQKAYVLIPIHEDLHWSLVIICIPDKEDETGPIILH
LDSLRLHSSRSIFENIKSFMKAEWTYLASEVAPLNLPIADKIWKHLPRRIEEKAIAVPQQKNDS
DCGLFVLFFMERFIEEAPERLKKKDLAMFGRQWFKPEEASGLRVKIRKILMLEFKKASDVNCDS
ESSPFTKGDDPANIDHQTDSD

Repeat found in LOC126718527
Repeat occurs 4 times in a sequence of 587 amino acids
Location between 57415404 and 57429473
Coverage of 5.45 %
Instances:
DDDDDDAP | DDDDDAPP | DDDDAPPE | DDDAPPEL |
pattern: DDD[DA][DAP][DAP][AEP][LPE]
MEEDRAKKRPLDLDWEKLLPNSSQNDDDDDDAPPELIVKSSTTTATMGSGDERHEDFEKWSDR
MLEEQIERKRRTCETMGPRMPDKGEKLRLTLKRIEDERERRKLARPQKLNSSYAYEGDGCEKPT
QSRSSGTVGVSNGFREESTSSQANSGSTFASRLCQKMEENQIICGETEAFKEELSVLSRCDRRK
MTSKEELSQSRRHRGRSSSKQWSSQRHNKLSKHALLNANKKRRASPTSSLHQNGEHWSSSFAKK
KDAFQVHPNGSRHKKEQTVVLIDEDESQSLIEEDESESLEITERVDNAECMKDAKITYPSRDDP
ESIEICYVDINCLAPEGYLTSTIMNFYIRYIQLQASPTNRAMCDYHFFNTYFYNKLKEAVSYKG
SDKDTYFAKFRRWWKGVNIFQKAYVLIPIHEDLHWSLVIICIPDKEDETGPIILHLDSLRLHSS
RSIFENIKSFMKAEWTYLASEVAPLNLPIADKIWKHLPRRIEEKAIAVPQQKNDSDCGLFVLFF
MERFIEEAPERLKKKDLAMFGRQWFKPEEASGLRVKIRKILMLEFKKASDVNCDSESSPFTKGD
DPANIDHQTDSD

Repeat found in LOC126718527
Repeat occurs 4 times in a sequence of 597 amino acids
Location between 57415404 and 57429473
Coverage of 5.36 %
Instances:
DDDDDDAP | DDDDDAPP | DDDDAPPE | DDDAPPEL |
pattern: DDD[DA][DAP][DAP][AEP][LPE]
MEEDRAKKRPLDLDWEKLLPNSSQNDDDDDDAPPELIVKSSTTTATMGSGDERHEDFEKWSDR
MLEEQIERKRRTCETMGPRMPDKGEKLRLTLKRIEDERERRKLARPQKLNSSYAYEGDGCEKPT
QSRSSGTVGVSNGFREESTSSQANSGSTFASRLCQKMEENQIICGETEAFKEELSVLSRCDRRK
MTSKEELSQSRRHRGRSSSKQWSSQRHNKLSKHALLNANKKRRASPTSSLHQNGEHWSSSFAKK
LKVVWLPLNLKDAFQVHPNGSRHKKEQTVVLIDEDESQSLIEEDESESLEITERVDNAECMKDA
KITYPSRDDPESIEICYVDINCLAPEGYLTSTIMNFYIRYIQLQASPTNRAMCDYHFFNTYFYN
KLKEAVSYKGSDKDTYFAKFRRWWKGVNIFQKAYVLIPIHEDLHWSLVIICIPDKEDETGPIIL
HLDSLRLHSSRSIFENIKSFMKAEWTYLASEVAPLNLPIADKIWKHLPRRIEEKAIAVPQQKND
SDCGLFVLFFMERFIEEAPERLKKKDLAMFGRQWFKPEEASGLRVKIRKILMLEFKKASDVNCD
SESSPFTKGDDPANIDHQTDSD

Repeat found in LOC126718527
Repeat occurs 4 times in a sequence of 512 amino acids
Location between 57417182 and 57429473
Coverage of 6.25 %
Instances:
DDDDDDAP | DDDDDAPP | DDDDAPPE | DDDAPPEL |
pattern: DDD[DA][DAP][DAP][AEP][LPE]
MEEDRAKKRPLDLDWEKLLPNSSQNDDDDDDAPPELIVKSSTTTATMGSGDERHEDFEKWSDR
MLEEQIERKRRTCETMGPRMPDKGEKLRLTLKRIEDERERRKLARPQKLNSSYAYEGDGCEKPT
QSRSSGTVGVSNGFREESTSSQANSGSTFASRLCQKMEENQIICGETEAFKEELSVLSRCDRRK
MTSKEELSQSRRHRGRSSSKQWSSQRHNKLSKHALLNANKKRRASPTSSLHQNGEHWSSSFAKK
LKVVWLPLNLKDAFQVHPNGSRHKKEQTVVLIDEDESQSLIEEDESESLEITERVDNAECMKDA
KITYPSRDDPESIEICYVDINCLAPEGYLTSTIMNFYIRYIQLQASPTNRAMCDYHFFNTYFYN
KLKEAVSYKGSDKDTYFAKFRRWWKGVNIFQKAYVLIPIHEDLHWSLVIICIPDKEDETGPIIL
HLDSLRLHSSRSIFENIKSFMKAEWTYLASEVAPLNLPIADKIWKHLPRRIEEKAIAEWHLCPA
I

### Similar gene clusters

### Similar known gene clusters

### NC_065537 - Cluster 13 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_065537 - Gene Cluster 13. Type = saccharide. Location: 84094542 - 84431528 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065538 - Cluster 14 - Terpene

### Gene cluster description

Download cluster GenBank file
NC_065538 - Gene Cluster 14. Type = terpene. Location: 3771300 - 3941185 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065538 - Cluster 15 - Transporter_associated

### Gene cluster description

Download cluster GenBank file
NC_065538 - Gene Cluster 15. Type = transporter_associated. Location: 24529537 - 25095794 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/transporter_associated: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[MatE/LTP_2/ABC2_membrane/ABC_tran]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065538 - Cluster 16 - Phenolamide

### Gene cluster description

Download cluster GenBank file
NC_065538 - Gene Cluster 16. Type = phenolamide. Location: 62513685 - 62637370 nt. Click on genes for more information.
Show pHMM detection rules used
plants/phenolamide: (minimum(2,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_Arg_deC_N,YjeF_N,Putative_PNPOx,PNP_phzG_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,Pyridoxal_deC]) or minimum(2,[MatE,Orn_Arg_deC_N,YjeF_N,Putative_PNPOx,PNP_phzG_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,Orn_DAP_Arg_deC,Orn_Arg_deC_N]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065538 - Cluster 17 - Alkaloid

### Gene cluster description

Download cluster GenBank file
NC_065538 - Gene Cluster 17. Type = alkaloid. Location: 66622489 - 67359978 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065538 - Cluster 18 - Terpene

### Gene cluster description

Download cluster GenBank file
NC_065538 - Gene Cluster 18. Type = terpene. Location: 79344543 - 79895040 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065538 - Cluster 19 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_065538 - Gene Cluster 19. Type = saccharide. Location: 84707041 - 84861302 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065538 - Cluster 20 - Terpene-saccharide

### Gene cluster description

Download cluster GenBank file
NC_065538 - Gene Cluster 20. Type = terpene-saccharide. Location: 86669316 - 87536970 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### Similar known gene clusters

### NC_065539 - Cluster 21 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_065539 - Gene Cluster 21. Type = saccharide. Location: 18625887 - 18767581 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065539 - Cluster 22 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_065539 - Gene Cluster 22. Type = saccharide. Location: 42624734 - 42751251 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065539 - Cluster 23 - Transporter_associated

### Gene cluster description

Download cluster GenBank file
NC_065539 - Gene Cluster 23. Type = transporter_associated. Location: 52681357 - 52925846 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/transporter_associated: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[MatE/LTP_2/ABC2_membrane/ABC_tran]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065540 - Cluster 24 - Putative

### Gene cluster description

Download cluster GenBank file
NC_065540 - Gene Cluster 24. Type = putative. Location: 7360498 - 7527730 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065540 - Cluster 25 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_065540 - Gene Cluster 25. Type = saccharide. Location: 34727761 - 35293114 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### Similar known gene clusters

### NC_065540 - Cluster 26 - Alkaloid-phenolamide

### Gene cluster description

Download cluster GenBank file
NC_065540 - Gene Cluster 26. Type = alkaloid-phenolamide. Location: 35812792 - 35953745 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/phenolamide: (minimum(2,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_Arg_deC_N,YjeF_N,Putative_PNPOx,PNP_phzG_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,Pyridoxal_deC]) or minimum(2,[MatE,Orn_Arg_deC_N,YjeF_N,Putative_PNPOx,PNP_phzG_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,Orn_DAP_Arg_deC,Orn_Arg_deC_N]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065540 - Cluster 27 - Putative

### Gene cluster description

Download cluster GenBank file
NC_065540 - Gene Cluster 27. Type = putative. Location: 37870101 - 38335652 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065541 - Cluster 28 - Terpene-saccharide

### Gene cluster description

Download cluster GenBank file
NC_065541 - Gene Cluster 28. Type = terpene-saccharide. Location: 15150384 - 15711951 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065541 - Cluster 29 - Terpene-alkaloid

### Gene cluster description

Download cluster GenBank file
NC_065541 - Gene Cluster 29. Type = terpene-alkaloid. Location: 19518372 - 19995729 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065541 - Cluster 30 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_065541 - Gene Cluster 30. Type = saccharide. Location: 20304433 - 20558024 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065541 - Cluster 31 - Lignan-saccharide

### Gene cluster description

Download cluster GenBank file
NC_065541 - Gene Cluster 31. Type = lignan-saccharide. Location: 34425034 - 35100289 nt. Click on genes for more information.
Show pHMM detection rules used
plants/lignan: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Dirigent]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065541 - Cluster 32 - Putative

### Gene cluster description

Download cluster GenBank file
NC_065541 - Gene Cluster 32. Type = putative. Location: 54108645 - 54573919 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065541 - Cluster 33 - Putative

### Gene cluster description

Download cluster GenBank file
NC_065541 - Gene Cluster 33. Type = putative. Location: 56295022 - 56908444 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065541 - Cluster 34 - Fatty_acid

### Gene cluster description

Download cluster GenBank file
NC_065541 - Gene Cluster 34. Type = fatty_acid. Location: 65484481 - 65619458 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065542 - Cluster 35 - Putative

### Gene cluster description

Download cluster GenBank file
NC_065542 - Gene Cluster 35. Type = putative. Location: 15910127 - 16059704 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### Similar known gene clusters

### NC_065542 - Cluster 36 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_065542 - Gene Cluster 36. Type = saccharide. Location: 17321796 - 17478480 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065542 - Cluster 37 - Alkaloid-saccharide

### Gene cluster description

Download cluster GenBank file
NC_065542 - Gene Cluster 37. Type = alkaloid-saccharide. Location: 24819436 - 24887398 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065543 - Cluster 38 - Fatty_acid

### Gene cluster description

Download cluster GenBank file
NC_065543 - Gene Cluster 38. Type = fatty_acid. Location: 40943513 - 41138250 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065543 - Cluster 39 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_065543 - Gene Cluster 39. Type = cyclopeptide. Location: 45167033 - 45809661 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC126704228
Repeat occurs 3 times in a sequence of 347 amino acids
Location between 45171748 and 45173516
Coverage of 11.24 %
Instances:
AGLKIINPFSHGF | AGLKMITPRQLNS | AGLKMINPFSHGF |
pattern: AGLK[MI]I[NT]P[FR][SQ][LH][GN][FS]
MDSVVVRKVWKENLVKEFELLKVALRSHRMVSIDTEFPGVVYRPANVDGHDLGKLPPNWNYQV
ISYVARLGLALCDDKGCLPDFGTKSQYVWEFNFKDFDVYNDLQNPESIELLERQGIDFDKNLKE
GIDSADFAALMLKSGLLGNHSAFTWVTFHGAYDIAHLMKILIRRPLPYDLTGFMIMVQSIFGKR
LFDLKHMMKFCDGLYGGLEKVANALGVQRLAGRSHQAGSDTLLTLQTFKKFLDVYFKEQNNGGL
GVRHNGHLLTRMQCVLHGLELNNGFHQSNNAGLKIINPFSHGFRRLNLNSAGLKMITPRQLNSA
GLKMINPFSHGFHVINLNLCRQTSAICN

Repeat found in LOC126703264
Repeat occurs 4 times in a sequence of 842 amino acids
Location between 45565976 and 45568505
Coverage of 3.8 %
Instances:
KCGAVEDA | KCGDVRTA | KCGDPETG | KCGDIDSS |
pattern: KCG[AD][VPI][RED][DST][GAS]
MAILTPLGSLNGHCTEQSYTLRPFKVTHYSLSHALYSKRASSLCYSTKFQNCSTSIQFQENPS
QKSIVKTHLLHNQPSNSVSSASKLIKECVDDGLFENAIRVYLKMFECDGFQAEKFRFFPCLIKA
FGGLGDVDKVKQVHGHVLNLGVLNDVSVGNSLLSVYLKCGAVEDAVQMFEEMGERDPVSWNSMI
SGFYQSGDYMGALITFSMMIWEYGVYPNRVACLSALSSCSSIKSLIRGREIHGFVVKSGLNVEE
FLVSGLIEMYMKCGDVRTAEHVFKGILDNESSRGNAVIWNVMILGYVSNGCLLQALDLFLDMLA
MGTKPDSSTLVAVLVLCSQLSDLAVGKQMHGCIVSFGLDYNVRVETALIDMYFKCGDPETGLKI
FRSSQNRNLVMWGAVISNCAQGGCAAEALELFYTFLSKYGFADSVMLLAVLRACSFLTLNSRGM
EIHGLAIKTGFDDDMFIGGALVDMYAKCQDIESAQKVFQRLPARDLVLWNSLISGYAQNECADK
ALKAFCEMQSEQIAPNSVTASCILSVCARFSVMILCKEIHCYLLRRGIESNVSVSNSLIATYAK
CGDIDSSTTLFEKMLERDKVSWNSIILGFGMHGHTDEMFVLFKKMTETGMKPDHATFTALLSAC
SHTGRVDMGLKCFKSMVEDHKLEPRVEQYTCIVDLLGRAGHLKQAYDLIMTMPCVPDDLIWGSL
LGSCKTHGNEKLAELVSKHIFELDPTCISYRVLLSNIYEGFGKQNEVTRVRSEIKDLRLKKQPG
CSWIEVDHKIHSFISGDHSHHQSKEIYGAIESLTTEMKRVGYNPRTQNVIGSDESNVEGINSSK
DIDLLYNKSVC

Repeat found in LOC126704231
Repeat occurs 4 times in a sequence of 581 amino acids
Location between 45589276 and 45591261
Coverage of 6.2 %
Instances:
AAATQADGA | AAASQADGA | AAAATQAEA | AAATQAEAI |
pattern: AAA[AST][QT][AQ][DAE][GAE][AI]
MDSSISTQADGAAATQADGAAASQADGATATATATQEAAAATQAEAIDGELPLVPPSVVSKTG
TGSGRKKSLAWNHFEKVKVDDGVTMAVCNYCKKSYLADSKSCGTSNLLAHVTICPKNPNREDKG
QKTLAFEPKNDGDEGFKLVSTTFSVEASRKALAEMIIIDELPFRCVEGYGFKKYVTTLQPKLRV
KDIPSRQTVARDVIGIYNSEREKLRKSLMGCRVCLTMDTWTSLQNLNYMCLTCHFIDDTWKLHK
RILNFCQVEDHKGETIGRKIEMSLREWGIDGIFTLTVDNASSNLTTVKFLQRVTKDWNGTVLGN
ELMHMRCCAHILNLIVGEGLKEIDASVGRVREAVRYVKSSPNRNQTFRNFMERLGMESKSLLCL
DVPTRWNSTYLMLETAKKFEKVFLRMDFEDDGYSSYFRSKEDSGGLGSPCMSDFQNCRAFVTFL
RLFYNATKKISGSLYVTSNAFFDEIFVIQEMGSVMVDKVKALLMKLYNFFCSVNSPNVEEPSGG
ERTPMVVGDASDPYVMVHSRYELFLEAEQSIGCSNEVDKYLAENCDGRRDGNFEVLGWWKDNSN
SFNCCI

### Similar gene clusters

### NC_065543 - Cluster 40 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_065543 - Gene Cluster 40. Type = saccharide. Location: 51341097 - 51517369 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065544 - Cluster 41 - Saccharide-polyketide

### Gene cluster description

Download cluster GenBank file
NC_065544 - Gene Cluster 41. Type = saccharide-polyketide. Location: 7940629 - 8331729 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### Similar known gene clusters

### NC_065544 - Cluster 42 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_065544 - Gene Cluster 42. Type = cyclopeptide. Location: 9781704 - 11174490 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC126704583
Repeat occurs 4 times in a sequence of 381 amino acids
Location between 10454009 and 10455671
Coverage of 6.3 %
Instances:
DSAIDS | DSAVDS | DSAIDS | DSATTK |
pattern: DSA[VIT][DT][KS]
MMHTKLSPMTSLLLFISLSSLTVGSTGENPFTPKTYLIRYWKKEIQNNQAKPIFLLSKASPLS
ATESASFSKLAAQNALSSRFSAFCASANLLCFPDSLPSTFGQKVSTEVVLQKNYGDSAIDSMDV
VLQKNYGDSAVDSMDVVLQKNYGDSAIDSATTKGGSGRFFRESMLKKGKVIPMPDISDKFPERS
FLPRSISSKQPFSTLKVSELKHIFHAGDNSTMEIMIVKSLSECKRAPNPGETKRCVSSAEDMID
FAVSVLGRNIDILTMKNVNGSKQSIMIGSIEGINGGKVTDSVTCHQLLFPYLLYYCHSVPKVRV
YQVDILDPNSKAKLNNGVVICHLNTSGWNPTHEAFLALGSAPGRIEVCHWVYQNDVTWTVVD

Repeat found in LOC126704583
Repeat occurs 4 times in a sequence of 381 amino acids
Location between 10454009 and 10455671
Coverage of 6.3 %
Instances:
DSAIDS | DSAVDS | DSAIDS | DSATTK |
pattern: DSA[VIT][DT][KS]
MMHTKLSPMTSLLLFISLSSLTVGSTGENPFTPKTYLIRYWKKEIQNNQAKPIFLLSKASPLS
ATESASFSKLAAQNALSSRFSAFCASANLLCFPDSLPSTFGQKVSTEVVLQKNYGDSAIDSMDV
VLQKNYGDSAVDSMDVVLQKNYGDSAIDSATTKGGSGRFFRESMLKKGKVIPMPDISDKFPERS
FLPRSISSKQPFSTLKVSELKHIFHAGDNSTMEIMIVKSLSECKRAPNPGETKRCVSSAEDMID
FAVSVLGRNIDILTMKNVNGSKQSIMIGSIEGINGGKVTDSVTCHQLLFPYLLYYCHSVPKVRV
YQVDILDPNSKAKLNNGVVICHLNTSGWNPTHEAFLALGSAPGRIEVCHWVYQNDVTWTVVD

Repeat found in LOC126704582
Repeat occurs 4 times in a sequence of 381 amino acids
Location between 10508538 and 10510200
Coverage of 6.3 %
Instances:
DSAIDS | DSAVDS | DSAIDS | DSATTK |
pattern: DSA[VIT][DT][KS]
MMHTKLSPMTSLLLFISLSSLTVGSTGENPFTPKTYLIRYWKKEIQNNQAKPIFLLSKASPLS
ATESASFSKLAAQNALSSRFSAFCASANLLCFPDSLPSTFGQKVSTEVVLQKNYGDSAIDSMDV
VLQKNYGDSAVDSMDVVLQKNYGDSAIDSATTKGGSGRFFRESMLKKGKVIPMPDISDKFPERS
FLPRSISSKQPFSTLKVSELKHIFHAGDNSTMEIMIVKSLSECKRAPNPGETKRCVSSAEDMID
FAVSVLGRNIDILTMKNVNGSKQSIMIGSIEGINGGKVTDSVTCHQLLFPYLLYYCHSVPKVRV
YQVDILDPNSKAKLNNGVVICHLNTSGWNPTHEAFLALGSAPGRIEVCHWVYQNDVTWTVVD

Repeat found in LOC126704582
Repeat occurs 4 times in a sequence of 381 amino acids
Location between 10508538 and 10510200
Coverage of 6.3 %
Instances:
DSAIDS | DSAVDS | DSAIDS | DSATTK |
pattern: DSA[VIT][DT][KS]
MMHTKLSPMTSLLLFISLSSLTVGSTGENPFTPKTYLIRYWKKEIQNNQAKPIFLLSKASPLS
ATESASFSKLAAQNALSSRFSAFCASANLLCFPDSLPSTFGQKVSTEVVLQKNYGDSAIDSMDV
VLQKNYGDSAVDSMDVVLQKNYGDSAIDSATTKGGSGRFFRESMLKKGKVIPMPDISDKFPERS
FLPRSISSKQPFSTLKVSELKHIFHAGDNSTMEIMIVKSLSECKRAPNPGETKRCVSSAEDMID
FAVSVLGRNIDILTMKNVNGSKQSIMIGSIEGINGGKVTDSVTCHQLLFPYLLYYCHSVPKVRV
YQVDILDPNSKAKLNNGVVICHLNTSGWNPTHEAFLALGSAPGRIEVCHWVYQNDVTWTVVD

Repeat found in LOC126704582
Repeat occurs 4 times in a sequence of 381 amino acids
Location between 10508538 and 10510200
Coverage of 6.3 %
Instances:
DSAIDS | DSAVDS | DSAIDS | DSATTK |
pattern: DSA[VIT][DT][KS]
MMHTKLSPMTSLLLFISLSSLTVGSTGENPFTPKTYLIRYWKKEIQNNQAKPIFLLSKASPLS
ATESASFSKLAAQNALSSRFSAFCASANLLCFPDSLPSTFGQKVSTEVVLQKNYGDSAIDSMDV
VLQKNYGDSAVDSMDVVLQKNYGDSAIDSATTKGGSGRFFRESMLKKGKVIPMPDISDKFPERS
FLPRSISSKQPFSTLKVSELKHIFHAGDNSTMEIMIVKSLSECKRAPNPGETKRCVSSAEDMID
FAVSVLGRNIDILTMKNVNGSKQSIMIGSIEGINGGKVTDSVTCHQLLFPYLLYYCHSVPKVRV
YQVDILDPNSKAKLNNGVVICHLNTSGWNPTHEAFLALGSAPGRIEVCHWVYQNDVTWTVVD

Repeat found in LOC126704582
Repeat occurs 4 times in a sequence of 381 amino acids
Location between 10508538 and 10510200
Coverage of 6.3 %
Instances:
DSAIDS | DSAVDS | DSAIDS | DSATTK |
pattern: DSA[VIT][DT][KS]
MMHTKLSPMTSLLLFISLSSLTVGSTGENPFTPKTYLIRYWKKEIQNNQAKPIFLLSKASPLS
ATESASFSKLAAQNALSSRFSAFCASANLLCFPDSLPSTFGQKVSTEVVLQKNYGDSAIDSMDV
VLQKNYGDSAVDSMDVVLQKNYGDSAIDSATTKGGSGRFFRESMLKKGKVIPMPDISDKFPERS
FLPRSISSKQPFSTLKVSELKHIFHAGDNSTMEIMIVKSLSECKRAPNPGETKRCVSSAEDMID
FAVSVLGRNIDILTMKNVNGSKQSIMIGSIEGINGGKVTDSVTCHQLLFPYLLYYCHSVPKVRV
YQVDILDPNSKAKLNNGVVICHLNTSGWNPTHEAFLALGSAPGRIEVCHWVYQNDVTWTVVD

Repeat found in LOC126704582
Repeat occurs 4 times in a sequence of 381 amino acids
Location between 10508538 and 10510200
Coverage of 6.3 %
Instances:
DSAIDS | DSAVDS | DSAIDS | DSATTK |
pattern: DSA[VIT][DT][KS]
MMHTKLSPMTSLLLFISLSSLTVGSTGENPFTPKTYLIRYWKKEIQNNQAKPIFLLSKASPLS
ATESASFSKLAAQNALSSRFSAFCASANLLCFPDSLPSTFGQKVSTEVVLQKNYGDSAIDSMDV
VLQKNYGDSAVDSMDVVLQKNYGDSAIDSATTKGGSGRFFRESMLKKGKVIPMPDISDKFPERS
FLPRSISSKQPFSTLKVSELKHIFHAGDNSTMEIMIVKSLSECKRAPNPGETKRCVSSAEDMID
FAVSVLGRNIDILTMKNVNGSKQSIMIGSIEGINGGKVTDSVTCHQLLFPYLLYYCHSVPKVRV
YQVDILDPNSKAKLNNGVVICHLNTSGWNPTHEAFLALGSAPGRIEVCHWVYQNDVTWTVVD

### Similar gene clusters

### NC_065544 - Cluster 43 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_065544 - Gene Cluster 43. Type = cyclopeptide. Location: 18110417 - 19371484 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC126706475
Repeat occurs 4 times in a sequence of 857 amino acids
Location between 18653279 and 18655853
Coverage of 4.2 %
Instances:
LIDFYAKNG | LIDFYAKCG | LIDMYAKCN | LIDVYSKCS |
pattern: LID[MFV]Y[AS]K[NC][GNS]
MSMSMSMRKHWQFTYQHYHLTLRHCSHKHHAFHFHSSTTLSPPPHLLQPLPRRAKSHQFAHFL
QLPIPPSHSHNPILYYQTLHAQLVVSGLHNQVFLANILLHSYSKCSRLRDARLLFDVMSQRNLI
SWSSLVSMYTRHGFNQQAFIVFTEFLTSCDQNPNEYILASVFRACSQLGGVYEGAQLHGFVVKT
GFEQDVYVGTSLIDFYAKNGDLDEARLVFDVLAEKTAVTWTTIITGYTKSGRGEVSLQLFDQMR
ETDLVPDKYVLSSVLSACSMLEFLDGGKQIHAYVLRRGAEMDVSVTNVLIDFYAKCGLVYTARN
LFDQMVVKNMIAWTTMIAGYMKNSFNLEAMKLFAEMAGLGWKPDGFACTSVLTSCGSLEALEHG
RQVHGYTIKANLEYDNFVKNGLIDMYAKCNSLTDARRVFEGMADHNVVSYNAMIEGYSSEEKLH
EALDLFREMRLRLLPPSLLTFVSLLGASAALLTLELSRQIHSLIIKYGVSLDVFAGSALIDVYS
KCSCVRDARLVFNEINEKDIVVWNAMFFGYTQQLENEEALKLYSELQLTRKTPNEFTFAALITA
ASNLASLQHGQQLHNQVIKLGADSDPFVTNSLVDMYAKCGCIKEAHKTFTSTFWRDIVCWNSMI
STYAQHGEAEDALQMFKGMIDEGVKPNYVTFVGVLSACSHAGLVEDGLHHFESMAHFGIEPGTD
HYTCIVSLLGRAGRLTEAREFIDKMPIKPAAVVWRSLLSACRVAGHVDIGRYAAEMAISVDPTD
SGSYILLSNIFASKGMWEDVKRLRKRMDFNGVVKEPGSSWIELNKDVHSFIARDRAHSMANLIY
SVLDNLILQIKGVGYVPDTFMLLMTD

Repeat found in LOC126706475
Repeat occurs 4 times in a sequence of 857 amino acids
Location between 18653279 and 18655853
Coverage of 4.2 %
Instances:
LIDFYAKNG | LIDFYAKCG | LIDMYAKCN | LIDVYSKCS |
pattern: LID[MFV]Y[AS]K[NC][GNS]
MSMSMSMRKHWQFTYQHYHLTLRHCSHKHHAFHFHSSTTLSPPPHLLQPLPRRAKSHQFAHFL
QLPIPPSHSHNPILYYQTLHAQLVVSGLHNQVFLANILLHSYSKCSRLRDARLLFDVMSQRNLI
SWSSLVSMYTRHGFNQQAFIVFTEFLTSCDQNPNEYILASVFRACSQLGGVYEGAQLHGFVVKT
GFEQDVYVGTSLIDFYAKNGDLDEARLVFDVLAEKTAVTWTTIITGYTKSGRGEVSLQLFDQMR
ETDLVPDKYVLSSVLSACSMLEFLDGGKQIHAYVLRRGAEMDVSVTNVLIDFYAKCGLVYTARN
LFDQMVVKNMIAWTTMIAGYMKNSFNLEAMKLFAEMAGLGWKPDGFACTSVLTSCGSLEALEHG
RQVHGYTIKANLEYDNFVKNGLIDMYAKCNSLTDARRVFEGMADHNVVSYNAMIEGYSSEEKLH
EALDLFREMRLRLLPPSLLTFVSLLGASAALLTLELSRQIHSLIIKYGVSLDVFAGSALIDVYS
KCSCVRDARLVFNEINEKDIVVWNAMFFGYTQQLENEEALKLYSELQLTRKTPNEFTFAALITA
ASNLASLQHGQQLHNQVIKLGADSDPFVTNSLVDMYAKCGCIKEAHKTFTSTFWRDIVCWNSMI
STYAQHGEAEDALQMFKGMIDEGVKPNYVTFVGVLSACSHAGLVEDGLHHFESMAHFGIEPGTD
HYTCIVSLLGRAGRLTEAREFIDKMPIKPAAVVWRSLLSACRVAGHVDIGRYAAEMAISVDPTD
SGSYILLSNIFASKGMWEDVKRLRKRMDFNGVVKEPGSSWIELNKDVHSFIARDRAHSMANLIY
SVLDNLILQIKGVGYVPDTFMLLMTD

Repeat found in LOC126706475
Repeat occurs 4 times in a sequence of 857 amino acids
Location between 18653279 and 18655853
Coverage of 4.2 %
Instances:
LIDFYAKNG | LIDFYAKCG | LIDMYAKCN | LIDVYSKCS |
pattern: LID[MFV]Y[AS]K[NC][GNS]
MSMSMSMRKHWQFTYQHYHLTLRHCSHKHHAFHFHSSTTLSPPPHLLQPLPRRAKSHQFAHFL
QLPIPPSHSHNPILYYQTLHAQLVVSGLHNQVFLANILLHSYSKCSRLRDARLLFDVMSQRNLI
SWSSLVSMYTRHGFNQQAFIVFTEFLTSCDQNPNEYILASVFRACSQLGGVYEGAQLHGFVVKT
GFEQDVYVGTSLIDFYAKNGDLDEARLVFDVLAEKTAVTWTTIITGYTKSGRGEVSLQLFDQMR
ETDLVPDKYVLSSVLSACSMLEFLDGGKQIHAYVLRRGAEMDVSVTNVLIDFYAKCGLVYTARN
LFDQMVVKNMIAWTTMIAGYMKNSFNLEAMKLFAEMAGLGWKPDGFACTSVLTSCGSLEALEHG
RQVHGYTIKANLEYDNFVKNGLIDMYAKCNSLTDARRVFEGMADHNVVSYNAMIEGYSSEEKLH
EALDLFREMRLRLLPPSLLTFVSLLGASAALLTLELSRQIHSLIIKYGVSLDVFAGSALIDVYS
KCSCVRDARLVFNEINEKDIVVWNAMFFGYTQQLENEEALKLYSELQLTRKTPNEFTFAALITA
ASNLASLQHGQQLHNQVIKLGADSDPFVTNSLVDMYAKCGCIKEAHKTFTSTFWRDIVCWNSMI
STYAQHGEAEDALQMFKGMIDEGVKPNYVTFVGVLSACSHAGLVEDGLHHFESMAHFGIEPGTD
HYTCIVSLLGRAGRLTEAREFIDKMPIKPAAVVWRSLLSACRVAGHVDIGRYAAEMAISVDPTD
SGSYILLSNIFASKGMWEDVKRLRKRMDFNGVVKEPGSSWIELNKDVHSFIARDRAHSMANLIY
SVLDNLILQIKGVGYVPDTFMLLMTD

Repeat found in LOC126706475
Repeat occurs 4 times in a sequence of 857 amino acids
Location between 18653279 and 18655853
Coverage of 4.2 %
Instances:
LIDFYAKNG | LIDFYAKCG | LIDMYAKCN | LIDVYSKCS |
pattern: LID[MFV]Y[AS]K[NC][GNS]
MSMSMSMRKHWQFTYQHYHLTLRHCSHKHHAFHFHSSTTLSPPPHLLQPLPRRAKSHQFAHFL
QLPIPPSHSHNPILYYQTLHAQLVVSGLHNQVFLANILLHSYSKCSRLRDARLLFDVMSQRNLI
SWSSLVSMYTRHGFNQQAFIVFTEFLTSCDQNPNEYILASVFRACSQLGGVYEGAQLHGFVVKT
GFEQDVYVGTSLIDFYAKNGDLDEARLVFDVLAEKTAVTWTTIITGYTKSGRGEVSLQLFDQMR
ETDLVPDKYVLSSVLSACSMLEFLDGGKQIHAYVLRRGAEMDVSVTNVLIDFYAKCGLVYTARN
LFDQMVVKNMIAWTTMIAGYMKNSFNLEAMKLFAEMAGLGWKPDGFACTSVLTSCGSLEALEHG
RQVHGYTIKANLEYDNFVKNGLIDMYAKCNSLTDARRVFEGMADHNVVSYNAMIEGYSSEEKLH
EALDLFREMRLRLLPPSLLTFVSLLGASAALLTLELSRQIHSLIIKYGVSLDVFAGSALIDVYS
KCSCVRDARLVFNEINEKDIVVWNAMFFGYTQQLENEEALKLYSELQLTRKTPNEFTFAALITA
ASNLASLQHGQQLHNQVIKLGADSDPFVTNSLVDMYAKCGCIKEAHKTFTSTFWRDIVCWNSMI
STYAQHGEAEDALQMFKGMIDEGVKPNYVTFVGVLSACSHAGLVEDGLHHFESMAHFGIEPGTD
HYTCIVSLLGRAGRLTEAREFIDKMPIKPAAVVWRSLLSACRVAGHVDIGRYAAEMAISVDPTD
SGSYILLSNIFASKGMWEDVKRLRKRMDFNGVVKEPGSSWIELNKDVHSFIARDRAHSMANLIY
SVLDNLILQIKGVGYVPDTFMLLMTD

Repeat found in LOC126706119
Repeat occurs 6 times in a sequence of 276 amino acids
Location between 19007579 and 19016942
Coverage of 17.39 %
Instances:
SRSRSPSY | SRSPSYRR | SRSISPRH | SRSPLRRH | SRSPTPRH
SRSSSLSP |
pattern: SRS[RSIP][LST][YPLR][RS][YPHR]
MPRDLSRSRSPSYRRRYSPSPVGHRSSRRSRRNRSQSPYSYSRRKSRSISPRHRRSRSPLRRH
KSRSPTPRHYKRQRSRSSSLSPIRKSSSSSLGSIERKNASEKLRIEEEEKKRRQQEAEQKLLEE
ETAKRVEEAIRRKVEESLLSKEIKLEIQRRLEEGRKRLHDEVAAQLEKEKEAAIIEARQREEQA
RKEKEELERLLEENRKRVEEAQRREALEQQRREEERYRELEELQRQKEEALRRKKQQEEEERSN
QLKLLGKNKSRPKLSFALGSK

Repeat found in LOC126706119
Repeat occurs 6 times in a sequence of 276 amino acids
Location between 19007579 and 19016942
Coverage of 17.39 %
Instances:
SRSRSPSY | SRSPSYRR | SRSISPRH | SRSPLRRH | SRSPTPRH
SRSSSLSP |
pattern: SRS[RSIP][LST][YPLR][RS][YPHR]
MPRDLSRSRSPSYRRRYSPSPVGHRSSRRSRRNRSQSPYSYSRRKSRSISPRHRRSRSPLRRH
KSRSPTPRHYKRQRSRSSSLSPIRKSSSSSLGSIERKNASEKLRIEEEEKKRRQQEAEQKLLEE
ETAKRVEEAIRRKVEESLLSKEIKLEIQRRLEEGRKRLHDEVAAQLEKEKEAAIIEARQREEQA
RKEKEELERLLEENRKRVEEAQRREALEQQRREEERYRELEELQRQKEEALRRKKQQEEEERSN
QLKLLGKNKSRPKLSFALGSK

Repeat found in LOC126706678
Repeat occurs 4 times in a sequence of 472 amino acids
Location between 19313557 and 19315139
Coverage of 12.71 %
Instances:
DQFDQDQFHQDQFHQ | DQFHQDQFHQDQFHQ | DQFHQDQFHQPREMV | DQFHQPREMVTALLR |
pattern: DQF[DH]Q[DP][RQ][FE][MH][VQ][DPT][RAQ][LFE][LMH][VRQ]
MNQERVIIFCGHMRDEPFVFSEDDGCCKTTMSWFSILAPEIRSPSSGTAPSSSPLRTLKSTLS
PFSVLKLPRRTFFTAVGSNIFIFHDSVNKILTFNNSSGDWKLAPPMNYPRTSPHVIVLDGKLYV
IGGLIHPIGGLKFPLPANYCFMEFFDPDIGTWESLPNPPFMDQFDQDQFHQDQFHQDQFHQPRE
MVTALLRDRKILVTSYTESVLYVYYIDYRVWTLFSDLSYLSKRNLPHFPCLSNLSKGNFLLSPD
MVKSVGVGDMLYRVSFDHVDHPKHLVIQAFNLALDQWFEGCLNVGSEIFGEFNEVLEDGYPCCG
LIHLSDQKFCLLLQSSYTEDGNGNGNGDFDRRRSAYFKPHSTSSFYLYSVVLEVSMILDKPRDL
TGFMGLNIVVLSTEKYRLVSPLLIQDAMLVDITFHPSNMLALRCNESLLNEFGMARPSKAVCEE
LLQQHLVIAKRIWDGPTHEELLFNL

### Similar gene clusters

### NC_065544 - Cluster 44 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_065544 - Gene Cluster 44. Type = cyclopeptide. Location: 18720474 - 19235053 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC126706119
Repeat occurs 6 times in a sequence of 276 amino acids
Location between 19007579 and 19016942
Coverage of 17.39 %
Instances:
SRSRSPSY | SRSPSYRR | SRSISPRH | SRSPLRRH | SRSPTPRH
SRSSSLSP |
pattern: SRS[RSIP][LST][YPLR][RS][YPHR]
MPRDLSRSRSPSYRRRYSPSPVGHRSSRRSRRNRSQSPYSYSRRKSRSISPRHRRSRSPLRRH
KSRSPTPRHYKRQRSRSSSLSPIRKSSSSSLGSIERKNASEKLRIEEEEKKRRQQEAEQKLLEE
ETAKRVEEAIRRKVEESLLSKEIKLEIQRRLEEGRKRLHDEVAAQLEKEKEAAIIEARQREEQA
RKEKEELERLLEENRKRVEEAQRREALEQQRREEERYRELEELQRQKEEALRRKKQQEEEERSN
QLKLLGKNKSRPKLSFALGSK

Repeat found in LOC126706119
Repeat occurs 6 times in a sequence of 276 amino acids
Location between 19007579 and 19016942
Coverage of 17.39 %
Instances:
SRSRSPSY | SRSPSYRR | SRSISPRH | SRSPLRRH | SRSPTPRH
SRSSSLSP |
pattern: SRS[RSIP][LST][YPLR][RS][YPHR]
MPRDLSRSRSPSYRRRYSPSPVGHRSSRRSRRNRSQSPYSYSRRKSRSISPRHRRSRSPLRRH
KSRSPTPRHYKRQRSRSSSLSPIRKSSSSSLGSIERKNASEKLRIEEEEKKRRQQEAEQKLLEE
ETAKRVEEAIRRKVEESLLSKEIKLEIQRRLEEGRKRLHDEVAAQLEKEKEAAIIEARQREEQA
RKEKEELERLLEENRKRVEEAQRREALEQQRREEERYRELEELQRQKEEALRRKKQQEEEERSN
QLKLLGKNKSRPKLSFALGSK

### Similar gene clusters

### NC_065544 - Cluster 45 - Transporter_associated-saccharide

### Gene cluster description

Download cluster GenBank file
NC_065544 - Gene Cluster 45. Type = transporter_associated-saccharide. Location: 21788195 - 23000262 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))
plants/transporter_associated: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[MatE/LTP_2/ABC2_membrane/ABC_tran]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065544 - Cluster 46 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_065544 - Gene Cluster 46. Type = cyclopeptide. Location: 44064478 - 44857511 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC126706450
Repeat occurs 8 times in a sequence of 663 amino acids
Location between 44422103 and 44424934
Coverage of 7.24 %
Instances:
DAKKSG | DAKDSY | DAKNLG | DAKDSY | DAKDNY
DAKDGY | DAKDNY | DAKDNY |
pattern: DAK[KDN][GLNS][GY]
MALRLTYWILFFHLLFLMCDHGNGARDIVAKQDWKQVEMTDQPDSASHETTSGTKESDYTTAY
RTTDAKKSGYVAQGGYAAAYSYSSKQDAKDSYKTAYGTKEASKDSEMEHKKHCDHANGRKHVPK
QHLKDAKNLGYVGGYAAAYSYGSKQDAKDSYITAYETRKDAKDNYITAYTKRDAKDGYVTQYGT
KDASKNSRMKHEKHGEVEEVANHLKQGKVENQKEMDRPYIAGYNKNREANYITSYNSQATKDSY
ISKYRTKEASKNSGMEHKKHDGVEDVTNQKEMDQPYIAGYNRNKEANYLTSYGTKEDAKDNYKL
NSNITQYGDASKNSRMDHQEHDGVEDVTNQKEMDQPYLAGYRKDAKDNYMAQYRTRQEAKESPI
QESDQPYIAGYRNKQEVKESNYITSFGDREDSKSSVIEHENNMKPKPSSHMDHLGAFKSGFFTM
DDLFVGNIMPLYFPIQELSEFLPREEADSIPFSMPQLPNVLQLFSIPIDSPNARAMEDTLQQCE
ATPITGETKLCATSLESMLDFVHSITGLWANLNVLTTKHPTMSTSLTQNYDVLRVSKELYAPKW
VACHPLPYPYKIFFCHFIENTKIFKVLLGGENGHKVEAVAVCHMDTSDWDPNHILFRQLGVKPG
SSPVCHFLPKYHLVWVPSTTTASI

Repeat found in LOC126706446
Repeat occurs 12 times in a sequence of 386 amino acids
Location between 44521955 and 44523465
Coverage of 40.41 %
Instances:
DFEPRPSVTVYVN | DFEPRPSVSAYNN | DFEPRPSITAYVN | DFEPRPSLTAYVN | DFEPRPSVTAYIN
DFEPRPSVTTYVN | DFEPRPSVTAYVN | DFEPRPSVTTYIN | DFEPRPSVTTYVN | DFEPRPSVTAYVN
DFEQRPNISACND | DFEPRPIASVYSE |
pattern: DFE[PQ]RP[NSI][VLAI][ST][VAT][YC][VNIS][DNE]
The following known motifs were found:
FEPR was found 11 times in this sequence
MNLLCRLKRSNYFELMTVDMESRFAWLTLFLLLLFANTIESRKDPGQYWTSVMKDQPMPKAIQ
GLVHLDSSPSKLSKNDNCHTSEGAIGKDQGEKPYVKDFEPRPSVTVYVNPSVTVYVNDVGLETK
NFVKDFEPRPSVSAYNNPSVSAYNNDVGLKTQKKFVKDFEPRPSITAYVNPSITAYVNDVGLET
KNNFAKDFEPRPSLTAYVNPSLTAYVNDVGLETKNNFVKDFEPRPSVTAYINPSVTAYINDVGL
KNQNKFVKDFEPRPSVTTYVNPSVTTYVNDVGLEIKKKFVNDFEPRPSVTAYVNPSVTAYVNDV
GLETKKNFVKDFEPRPSVTTYINPSVTTYINDVSPETNNFVKDFEPRPSVTTYVNPSVTTYVND
VGLETKKKFVNDFEPRPSVTAYVNPSVTAYVNVVDPETKKKFVNDFEQRPNISACNDDDVGSKD
EKPFVEDFEPRPIASVYSE

Repeat found in LOC126706446
Repeat occurs 11 times in a sequence of 362 amino acids
Location between 44521955 and 44523465
Coverage of 39.5 %
Instances:
DFEPRPSVTVYVN | DFEPRPSVSAYNN | DFEPRPSITAYVN | DFEPRPSLTAYVN | DFEPRPSVTAYIN
DFEPRPSVTTYVN | DFEPRPSVTAYVN | DFEPRPSVTTYVN | DFEPRPSVTAYVN | DFEQRPNISACND
DFEPRPIASVYSE |
pattern: DFE[PQ]RP[NSI][VLAI][ST][VAT][YC][VNIS][DNE]
The following known motifs were found:
FEPR was found 10 times in this sequence
MNLLCRLKRSNYFELMTVDMESRFAWLTLFLLLLFANTIESRKDPGQYWTSVMKDQPMPKAIQ
GLVHLDSSPSKLSKNDNCHTSEGAIGKDQGEKPYVKDFEPRPSVTVYVNPSVTVYVNDVGLETK
NFVKDFEPRPSVSAYNNPSVSAYNNDVGLKTQKKFVKDFEPRPSITAYVNPSITAYVNDVGLET
KNNFAKDFEPRPSLTAYVNPSLTAYVNDVGLETKNNFVKDFEPRPSVTAYINPSVTAYINDVGL
KNQNKFVKDFEPRPSVTTYVNPSVTTYVNDVGLEIKKKFVNDFEPRPSVTAYVNPSVTAYVNDV
GLETKKNFVKDFEPRPSVTTYVNPSVTTYVNDVGLETKKKFVNDFEPRPSVTAYVNPSVTAYVN
VVDPETKKKFVNDFEQRPNISACNDDDVGSKDEKPFVEDFEPRPIASVYSE

Repeat found in LOC126706446
Repeat occurs 10 times in a sequence of 337 amino acids
Location between 44521955 and 44523465
Coverage of 32.64 %
Instances:
DFEPRPSVTVY | DFEPRPSVSAY | DFEPRPSITAY | DFEPRPSLTAY | DFEPRPSVTAY
DFEPRPSVTTY | DFEPRPSVTTY | DFEPRPSVTAY | DFEQRPNISAC | DFEPRPIASVY
pattern: DFE[PQ]RP[NSI][VLAI][ST][VAT][YC]
The following known motifs were found:
FEPR was found 9 times in this sequence
MNLLCRLKRSNYFELMTVDMESRFAWLTLFLLLLFANTIESRKDPGQYWTSVMKDQPMPKAIQ
GLVHLDSSPSKLSKNDNCHTSEGAIGKDQGEKPYVKDFEPRPSVTVYPSVTVYVNDVGLETKNF
VKDFEPRPSVSAYPSVSAYNNDVGLKTQKKFVKDFEPRPSITAYPSITAYVNDVGLETKNNFAK
DFEPRPSLTAYPSLTAYVNDVGLETKNNFVKDFEPRPSVTAYPSVTAYINDVGLKNQNKFVKDF
EPRPSVTTYPSVTTYVNDVGLEIKKKFVNDFEPRPSVTTYPSVTTYVNDVGLETKKKFVNDFEP
RPSVTAYPSVTAYVNVVDPETKKKFVNDFEQRPNISACNDDDVGSKDEKPFVEDFEPRPIASVY
SE

Repeat found in LOC126706446
Repeat occurs 11 times in a sequence of 361 amino acids
Location between 44521955 and 44523465
Coverage of 33.52 %
Instances:
DFEPRPSVTVY | DFEPRPSVSAY | DFEPRPSITAY | DFEPRPSLTAY | DFEPRPSVTAY
DFEPRPSVTAY | DFEPRPSVTTY | DFEPRPSVTTY | DFEPRPSVTAY | DFEQRPNISAC
DFEPRPIASVY |
pattern: DFE[PQ]RP[NSI][VLAI][ST][VAT][YC]
The following known motifs were found:
FEPR was found 10 times in this sequence
MNLLCRLKRSNYFELMTVDMESRFAWLTLFLLLLFANTIESRKDPGQYWTSVMKDQPMPKAIQ
GLVHLDSSPSKLSKNDNCHTSEGAIGKDQGEKPYVKDFEPRPSVTVYPSVTVYVNDVGLETKNF
VKDFEPRPSVSAYPSVSAYNNDVGLKTQKKFVKDFEPRPSITAYPSITAYVNDVGLETKNNFAK
DFEPRPSLTAYPSLTAYVNDVGLETKNNFVKDFEPRPSVTAYPSVTAYINDVGLKNQNKFVKDF
EPRPSVTAYPSVTAYVNDVGLETKKNFVKDFEPRPSVTTYPSVTTYINDVSPETNNFVKDFEPR
PSVTTYPSVTTYVNDVGLETKKKFVNDFEPRPSVTAYPSVTAYVNVVDPETKKKFVNDFEQRPN
ISACNDDDVGSKDEKPFVEDFEPRPIASVYSE

Repeat found in LOC126706446
Repeat occurs 10 times in a sequence of 337 amino acids
Location between 44521955 and 44523465
Coverage of 32.64 %
Instances:
DFEPRPSVTVY | DFEPRPSVSAY | DFEPRPSITAY | DFEPRPSLTAY | DFEPRPSVTAY
DFEPRPSVTAY | DFEPRPSVTTY | DFEPRPSVTAY | DFEQRPNISAC | DFEPRPIASVY
pattern: DFE[PQ]RP[NSI][VLAI][ST][VAT][YC]
The following known motifs were found:
FEPR was found 9 times in this sequence
MNLLCRLKRSNYFELMTVDMESRFAWLTLFLLLLFANTIESRKDPGQYWTSVMKDQPMPKAIQ
GLVHLDSSPSKLSKNDNCHTSEGAIGKDQGEKPYVKDFEPRPSVTVYPSVTVYVNDVGLETKNF
VKDFEPRPSVSAYPSVSAYNNDVGLKTQKKFVKDFEPRPSITAYPSITAYVNDVGLETKNNFAK
DFEPRPSLTAYPSLTAYVNDVGLETKNNFVKDFEPRPSVTAYPSVTAYINDVGLKNQNKFVKDF
EPRPSVTAYPSVTAYVNDVGLETKKNFVKDFEPRPSVTTYPSVTTYVNDVGLETKKKFVNDFEP
RPSVTAYPSVTAYVNVVDPETKKKFVNDFEQRPNISACNDDDVGSKDEKPFVEDFEPRPIASVY
SE

Repeat found in LOC126706446
Repeat occurs 9 times in a sequence of 312 amino acids
Location between 44521955 and 44523465
Coverage of 31.73 %
Instances:
DFEPRPSVTVY | DFEPRPSVSAY | DFEPRPSITAY | DFEPRPSLTAY | DFEPRPSVTAY
DFEPRPSVTTY | DFEPRPSVTAY | DFEQRPNISAC | DFEPRPIASVY |
pattern: DFE[PQ]RP[NSI][VLAI][ST][VAT][YC]
The following known motifs were found:
FEPR was found 8 times in this sequence
MNLLCRLKRSNYFELMTVDMESRFAWLTLFLLLLFANTIESRKDPGQYWTSVMKDQPMPKAIQ
GLVHLDSSPSKLSKNDNCHTSEGAIGKDQGEKPYVKDFEPRPSVTVYPSVTVYVNDVGLETKNF
VKDFEPRPSVSAYPSVSAYNNDVGLKTQKKFVKDFEPRPSITAYPSITAYVNDVGLETKNNFAK
DFEPRPSLTAYPSLTAYVNDVGLETKNNFVKDFEPRPSVTAYPSVTAYINDVGLKNQNKFVKDF
EPRPSVTTYPSVTTYVNDVGLETKKKFVNDFEPRPSVTAYPSVTAYVNVVDPETKKKFVNDFEQ
RPNISACNDDDVGSKDEKPFVEDFEPRPIASVYSE

Repeat found in LOC126706446
Repeat occurs 11 times in a sequence of 361 amino acids
Location between 44521955 and 44523465
Coverage of 39.61 %
Instances:
DFEPRPSVTVYVN | DFEPRPSVSAYNN | DFEPRPSITAYVN | DFEPRPSLTAYVN | DFEPRPSVTTYVN
DFEPRPSVTAYVN | DFEPRPSVTTYIN | DFEPRPSVTTYVN | DFEPRPSVTAYVN | DFEQRPNISACND
DFEPRPIASVYSE |
pattern: DFE[PQ]RP[NSI][VLAI][ST][VAT][YC][VNIS][DNE]
The following known motifs were found:
FEPR was found 10 times in this sequence
MNLLCRLKRSNYFELMTVDMESRFAWLTLFLLLLFANTIESRKDPGQYWTSVMKDQPMPKAIQ
GLVHLDSSPSKLSKNDNCHTSEGAIGKDQGEKPYVKDFEPRPSVTVYVNPSVTVYVNDVGLETK
NFVKDFEPRPSVSAYNNPSVSAYNNDVGLKTQKKFVKDFEPRPSITAYVNPSITAYVNDVGLET
KNNFAKDFEPRPSLTAYVNPSLTAYVNDVGLETKNNFVKDFEPRPSVTTYVNPSVTTYVNDVGL
EIKKKFVNDFEPRPSVTAYVNPSVTAYVNDVGLETKKNFVKDFEPRPSVTTYINPSVTTYINDV
SPETNNFVKDFEPRPSVTTYVNPSVTTYVNDVGLETKKKFVNDFEPRPSVTAYVNPSVTAYVNV
VDPETKKKFVNDFEQRPNISACNDDDVGSKDEKPFVEDFEPRPIASVYSE

Repeat found in LOC126706446
Repeat occurs 9 times in a sequence of 312 amino acids
Location between 44521955 and 44523465
Coverage of 31.73 %
Instances:
DFEPRPSVTVY | DFEPRPSVSAY | DFEPRPSITAY | DFEPRPSLTAY | DFEPRPSVTTY
DFEPRPSVTTY | DFEPRPSVTAY | DFEQRPNISAC | DFEPRPIASVY |
pattern: DFE[PQ]RP[NSI][VLAI][ST][VAT][YC]
The following known motifs were found:
FEPR was found 8 times in this sequence
MNLLCRLKRSNYFELMTVDMESRFAWLTLFLLLLFANTIESRKDPGQYWTSVMKDQPMPKAIQ
GLVHLDSSPSKLSKNDNCHTSEGAIGKDQGEKPYVKDFEPRPSVTVYPSVTVYVNDVGLETKNF
VKDFEPRPSVSAYPSVSAYNNDVGLKTQKKFVKDFEPRPSITAYPSITAYVNDVGLETKNNFAK
DFEPRPSLTAYPSLTAYVNDVGLETKNNFVKDFEPRPSVTTYPSVTTYVNDVGLEIKKKFVNDF
EPRPSVTTYPSVTTYVNDVGLETKKKFVNDFEPRPSVTAYPSVTAYVNVVDPETKKKFVNDFEQ
RPNISACNDDDVGSKDEKPFVEDFEPRPIASVYSE

Repeat found in LOC126706446
Repeat occurs 10 times in a sequence of 336 amino acids
Location between 44521955 and 44523465
Coverage of 32.74 %
Instances:
DFEPRPSVTVY | DFEPRPSVSAY | DFEPRPSITAY | DFEPRPSLTAY | DFEPRPSVTAY
DFEPRPSVTTY | DFEPRPSVTTY | DFEPRPSVTAY | DFEQRPNISAC | DFEPRPIASVY
pattern: DFE[PQ]RP[NSI][VLAI][ST][VAT][YC]
The following known motifs were found:
FEPR was found 9 times in this sequence
MNLLCRLKRSNYFELMTVDMESRFAWLTLFLLLLFANTIESRKDPGQYWTSVMKDQPMPKAIQ
GLVHLDSSPSKLSKNDNCHTSEGAIGKDQGEKPYVKDFEPRPSVTVYPSVTVYVNDVGLETKNF
VKDFEPRPSVSAYPSVSAYNNDVGLKTQKKFVKDFEPRPSITAYPSITAYVNDVGLETKNNFAK
DFEPRPSLTAYPSLTAYVNDVGLETKNNFVKDFEPRPSVTAYPSVTAYVNDVGLETKKNFVKDF
EPRPSVTTYPSVTTYINDVSPETNNFVKDFEPRPSVTTYPSVTTYVNDVGLETKKKFVNDFEPR
PSVTAYPSVTAYVNVVDPETKKKFVNDFEQRPNISACNDDDVGSKDEKPFVEDFEPRPIASVYS
E

Repeat found in LOC126706446
Repeat occurs 9 times in a sequence of 312 amino acids
Location between 44521955 and 44523465
Coverage of 31.73 %
Instances:
DFEPRPSVTVY | DFEPRPSVSAY | DFEPRPSITAY | DFEPRPSLTAY | DFEPRPSVTAY
DFEPRPSVTTY | DFEPRPSVTAY | DFEQRPNISAC | DFEPRPIASVY |
pattern: DFE[PQ]RP[NSI][VLAI][ST][VAT][YC]
The following known motifs were found:
FEPR was found 8 times in this sequence
MNLLCRLKRSNYFELMTVDMESRFAWLTLFLLLLFANTIESRKDPGQYWTSVMKDQPMPKAIQ
GLVHLDSSPSKLSKNDNCHTSEGAIGKDQGEKPYVKDFEPRPSVTVYPSVTVYVNDVGLETKNF
VKDFEPRPSVSAYPSVSAYNNDVGLKTQKKFVKDFEPRPSITAYPSITAYVNDVGLETKNNFAK
DFEPRPSLTAYPSLTAYVNDVGLETKNNFVKDFEPRPSVTAYPSVTAYVNDVGLETKKNFVKDF
EPRPSVTTYPSVTTYVNDVGLETKKKFVNDFEPRPSVTAYPSVTAYVNVVDPETKKKFVNDFEQ
RPNISACNDDDVGSKDEKPFVEDFEPRPIASVYSE

Repeat found in LOC126706446
Repeat occurs 11 times in a sequence of 361 amino acids
Location between 44521955 and 44523465
Coverage of 33.52 %
Instances:
DFEPRPSVTVY | DFEPRPSVSAY | DFEPRPSITAY | DFEPRPSVTAY | DFEPRPSVTTY
DFEPRPSVTAY | DFEPRPSVTTY | DFEPRPSVTTY | DFEPRPSVTAY | DFEQRPNISAC
DFEPRPIASVY |
pattern: DFE[PQ]RP[NSI][VAI][ST][VAT][YC]
The following known motifs were found:
FEPR was found 10 times in this sequence
MNLLCRLKRSNYFELMTVDMESRFAWLTLFLLLLFANTIESRKDPGQYWTSVMKDQPMPKAIQ
GLVHLDSSPSKLSKNDNCHTSEGAIGKDQGEKPYVKDFEPRPSVTVYPSVTVYVNDVGLETKNF
VKDFEPRPSVSAYPSVSAYNNDVGLKTQKKFVKDFEPRPSITAYPSITAYVNDVGLETKNNFAK
DFEPRPSVTAYPSVTAYINDVGLKNQNKFVKDFEPRPSVTTYPSVTTYVNDVGLEIKKKFVNDF
EPRPSVTAYPSVTAYVNDVGLETKKNFVKDFEPRPSVTTYPSVTTYINDVSPETNNFVKDFEPR
PSVTTYPSVTTYVNDVGLETKKKFVNDFEPRPSVTAYPSVTAYVNVVDPETKKKFVNDFEQRPN
ISACNDDDVGSKDEKPFVEDFEPRPIASVYSE

Repeat found in LOC126706446
Repeat occurs 10 times in a sequence of 336 amino acids
Location between 44521955 and 44523465
Coverage of 32.74 %
Instances:
DFEPRPSVTVY | DFEPRPSVSAY | DFEPRPSITAY | DFEPRPSVTAY | DFEPRPSVTAY
DFEPRPSVTTY | DFEPRPSVTTY | DFEPRPSVTAY | DFEQRPNISAC | DFEPRPIASVY
pattern: DFE[PQ]RP[NSI][VAI][ST][VAT][YC]
The following known motifs were found:
FEPR was found 9 times in this sequence
MNLLCRLKRSNYFELMTVDMESRFAWLTLFLLLLFANTIESRKDPGQYWTSVMKDQPMPKAIQ
GLVHLDSSPSKLSKNDNCHTSEGAIGKDQGEKPYVKDFEPRPSVTVYPSVTVYVNDVGLETKNF
VKDFEPRPSVSAYPSVSAYNNDVGLKTQKKFVKDFEPRPSITAYPSITAYVNDVGLETKNNFAK
DFEPRPSVTAYPSVTAYINDVGLKNQNKFVKDFEPRPSVTAYPSVTAYVNDVGLETKKNFVKDF
EPRPSVTTYPSVTTYINDVSPETNNFVKDFEPRPSVTTYPSVTTYVNDVGLETKKKFVNDFEPR
PSVTAYPSVTAYVNVVDPETKKKFVNDFEQRPNISACNDDDVGSKDEKPFVEDFEPRPIASVYS
E

Repeat found in LOC126706446
Repeat occurs 10 times in a sequence of 336 amino acids
Location between 44521955 and 44523465
Coverage of 26.79 %
Instances:
DFEPRPSVT | DFEPRPSVS | DFEPRPSIT | DFEPRPSVT | DFEPRPSVT
DFEPRPSVT | DFEPRPSVT | DFEPRPSVT | DFEQRPNIS | DFEPRPIAS
pattern: DFE[PQ]RP[NSI][VAI][ST]
The following known motifs were found:
FEPR was found 9 times in this sequence
MNLLCRLKRSNYFELMTVDMESRFAWLTLFLLLLFANTIESRKDPGQYWTSVMKDQPMPKAIQ
GLVHLDSSPSKLSKNDNCHTSEGAIGKDQGEKPYVKDFEPRPSVTPSVTVYVNDVGLETKNFVK
DFEPRPSVSPSVSAYNNDVGLKTQKKFVKDFEPRPSITPSITAYVNDVGLETKNNFAKDFEPRP
SVTPSVTTYVNDVGLEIKKKFVNDFEPRPSVTPSVTAYVNDVGLETKKNFVKDFEPRPSVTPSV
TTYINDVSPETNNFVKDFEPRPSVTPSVTTYVNDVGLETKKKFVNDFEPRPSVTPSVTAYVNVV
DPETKKKFVNDFEQRPNISACNDDDVGSKDEKPFVEDFEPRPIASVYSE

Repeat found in LOC126706446
Repeat occurs 11 times in a sequence of 361 amino acids
Location between 44521955 and 44523465
Coverage of 33.52 %
Instances:
DFEPRPSVTVY | DFEPRPSVSAY | DFEPRPSLTAY | DFEPRPSVTAY | DFEPRPSVTTY
DFEPRPSVTAY | DFEPRPSVTTY | DFEPRPSVTTY | DFEPRPSVTAY | DFEQRPNISAC
DFEPRPIASVY |
pattern: DFE[PQ]RP[NSI][VLAI][ST][VAT][YC]
The following known motifs were found:
FEPR was found 10 times in this sequence
MNLLCRLKRSNYFELMTVDMESRFAWLTLFLLLLFANTIESRKDPGQYWTSVMKDQPMPKAIQ
GLVHLDSSPSKLSKNDNCHTSEGAIGKDQGEKPYVKDFEPRPSVTVYPSVTVYVNDVGLETKNF
VKDFEPRPSVSAYPSVSAYNNDVGLKTQKKFVKDFEPRPSLTAYPSLTAYVNDVGLETKNNFVK
DFEPRPSVTAYPSVTAYINDVGLKNQNKFVKDFEPRPSVTTYPSVTTYVNDVGLEIKKKFVNDF
EPRPSVTAYPSVTAYVNDVGLETKKNFVKDFEPRPSVTTYPSVTTYINDVSPETNNFVKDFEPR
PSVTTYPSVTTYVNDVGLETKKKFVNDFEPRPSVTAYPSVTAYVNVVDPETKKKFVNDFEQRPN
ISACNDDDVGSKDEKPFVEDFEPRPIASVYSE

Repeat found in LOC126706446
Repeat occurs 10 times in a sequence of 336 amino acids
Location between 44521955 and 44523465
Coverage of 26.79 %
Instances:
DFEPRPSVT | DFEPRPSVS | DFEPRPSLT | DFEPRPSVT | DFEPRPSVT
DFEPRPSVT | DFEPRPSVT | DFEPRPSVT | DFEQRPNIS | DFEPRPIAS
pattern: DFE[PQ]RP[NSI][VLAI][ST]
The following known motifs were found:
FEPR was found 9 times in this sequence
MNLLCRLKRSNYFELMTVDMESRFAWLTLFLLLLFANTIESRKDPGQYWTSVMKDQPMPKAIQ
GLVHLDSSPSKLSKNDNCHTSEGAIGKDQGEKPYVKDFEPRPSVTPSVTVYVNDVGLETKNFVK
DFEPRPSVSPSVSAYNNDVGLKTQKKFVKDFEPRPSLTPSLTAYVNDVGLETKNNFVKDFEPRP
SVTPSVTTYVNDVGLEIKKKFVNDFEPRPSVTPSVTAYVNDVGLETKKNFVKDFEPRPSVTPSV
TTYINDVSPETNNFVKDFEPRPSVTPSVTTYVNDVGLETKKKFVNDFEPRPSVTPSVTAYVNVV
DPETKKKFVNDFEQRPNISACNDDDVGSKDEKPFVEDFEPRPIASVYSE

Repeat found in LOC126706446
Repeat occurs 9 times in a sequence of 311 amino acids
Location between 44521955 and 44523465
Coverage of 31.83 %
Instances:
DFEPRPSVTVY | DFEPRPSVSAY | DFEPRPSLTAY | DFEPRPSVTAY | DFEPRPSVTTY
DFEPRPSVTTY | DFEPRPSVTAY | DFEQRPNISAC | DFEPRPIASVY |
pattern: DFE[PQ]RP[NSI][VLAI][ST][VAT][YC]
The following known motifs were found:
FEPR was found 8 times in this sequence
MNLLCRLKRSNYFELMTVDMESRFAWLTLFLLLLFANTIESRKDPGQYWTSVMKDQPMPKAIQ
GLVHLDSSPSKLSKNDNCHTSEGAIGKDQGEKPYVKDFEPRPSVTVYPSVTVYVNDVGLETKNF
VKDFEPRPSVSAYPSVSAYNNDVGLKTQKKFVKDFEPRPSLTAYPSLTAYVNDVGLETKNNFVK
DFEPRPSVTAYPSVTAYVNDVGLETKKNFVKDFEPRPSVTTYPSVTTYINDVSPETNNFVKDFE
PRPSVTTYPSVTTYVNDVGLETKKKFVNDFEPRPSVTAYPSVTAYVNVVDPETKKKFVNDFEQR
PNISACNDDDVGSKDEKPFVEDFEPRPIASVYSE

Repeat found in LOC126706446
Repeat occurs 10 times in a sequence of 336 amino acids
Location between 44521955 and 44523465
Coverage of 26.79 %
Instances:
DFEPRPSVT | DFEPRPSVS | DFEPRPSVT | DFEPRPSVT | DFEPRPSVT
DFEPRPSVT | DFEPRPSVT | DFEPRPSVT | DFEQRPNIS | DFEPRPIAS
pattern: DFE[PQ]RP[NSI][VAI][ST]
The following known motifs were found:
FEPR was found 9 times in this sequence
MNLLCRLKRSNYFELMTVDMESRFAWLTLFLLLLFANTIESRKDPGQYWTSVMKDQPMPKAIQ
GLVHLDSSPSKLSKNDNCHTSEGAIGKDQGEKPYVKDFEPRPSVTPSVTVYVNDVGLETKNFVK
DFEPRPSVSPSVSAYNNDVGLKTQKKFVKDFEPRPSVTPSVTAYINDVGLKNQNKFVKDFEPRP
SVTPSVTTYVNDVGLEIKKKFVNDFEPRPSVTPSVTAYVNDVGLETKKNFVKDFEPRPSVTPSV
TTYINDVSPETNNFVKDFEPRPSVTPSVTTYVNDVGLETKKKFVNDFEPRPSVTPSVTAYVNVV
DPETKKKFVNDFEQRPNISACNDDDVGSKDEKPFVEDFEPRPIASVYSE

Repeat found in LOC126706446
Repeat occurs 9 times in a sequence of 311 amino acids
Location between 44521955 and 44523465
Coverage of 26.05 %
Instances:
DFEPRPSVT | DFEPRPSVS | DFEPRPSVT | DFEPRPSVT | DFEPRPSVT
DFEPRPSVT | DFEPRPSVT | DFEQRPNIS | DFEPRPIAS |
pattern: DFE[PQ]RP[NSI][VAI][ST]
The following known motifs were found:
FEPR was found 8 times in this sequence
MNLLCRLKRSNYFELMTVDMESRFAWLTLFLLLLFANTIESRKDPGQYWTSVMKDQPMPKAIQ
GLVHLDSSPSKLSKNDNCHTSEGAIGKDQGEKPYVKDFEPRPSVTPSVTVYVNDVGLETKNFVK
DFEPRPSVSPSVSAYNNDVGLKTQKKFVKDFEPRPSVTPSVTTYVNDVGLEIKKKFVNDFEPRP
SVTPSVTAYVNDVGLETKKNFVKDFEPRPSVTPSVTTYINDVSPETNNFVKDFEPRPSVTPSVT
TYVNDVGLETKKKFVNDFEPRPSVTPSVTAYVNVVDPETKKKFVNDFEQRPNISACNDDDVGSK
DEKPFVEDFEPRPIASVYSE

Repeat found in LOC126706446
Repeat occurs 11 times in a sequence of 361 amino acids
Location between 44521955 and 44523465
Coverage of 39.61 %
Instances:
DFEPRPSVTVYVN | DFEPRPSITAYVN | DFEPRPSLTAYVN | DFEPRPSVTAYIN | DFEPRPSVTTYVN
DFEPRPSVTAYVN | DFEPRPSVTTYIN | DFEPRPSVTTYVN | DFEPRPSVTAYVN | DFEQRPNISACND
DFEPRPIASVYSE |
pattern: DFE[PQ]RP[NSI][VLAI][ST][VAT][YC][VNIS][DNE]
The following known motifs were found:
FEPR was found 10 times in this sequence
MNLLCRLKRSNYFELMTVDMESRFAWLTLFLLLLFANTIESRKDPGQYWTSVMKDQPMPKAIQ
GLVHLDSSPSKLSKNDNCHTSEGAIGKDQGEKPYVKDFEPRPSVTVYVNPSVTVYVNDVGLETK
NFVKDFEPRPSITAYVNPSITAYVNDVGLETKNNFAKDFEPRPSLTAYVNPSLTAYVNDVGLET
KNNFVKDFEPRPSVTAYINPSVTAYINDVGLKNQNKFVKDFEPRPSVTTYVNPSVTTYVNDVGL
EIKKKFVNDFEPRPSVTAYVNPSVTAYVNDVGLETKKNFVKDFEPRPSVTTYINPSVTTYINDV
SPETNNFVKDFEPRPSVTTYVNPSVTTYVNDVGLETKKKFVNDFEPRPSVTAYVNPSVTAYVNV
VDPETKKKFVNDFEQRPNISACNDDDVGSKDEKPFVEDFEPRPIASVYSE

Repeat found in LOC126706446
Repeat occurs 10 times in a sequence of 336 amino acids
Location between 44521955 and 44523465
Coverage of 26.79 %
Instances:
DFEPRPSVT | DFEPRPSIT | DFEPRPSVT | DFEPRPSVT | DFEPRPSVT
DFEPRPSVT | DFEPRPSVT | DFEPRPSVT | DFEQRPNIS | DFEPRPIAS
pattern: DFE[PQ]RP[NSI][VAI][ST]
The following known motifs were found:
FEPR was found 9 times in this sequence
MNLLCRLKRSNYFELMTVDMESRFAWLTLFLLLLFANTIESRKDPGQYWTSVMKDQPMPKAIQ
GLVHLDSSPSKLSKNDNCHTSEGAIGKDQGEKPYVKDFEPRPSVTPSVTVYVNDVGLETKNFVK
DFEPRPSITPSITAYVNDVGLETKNNFAKDFEPRPSVTPSVTAYINDVGLKNQNKFVKDFEPRP
SVTPSVTTYVNDVGLEIKKKFVNDFEPRPSVTPSVTAYVNDVGLETKKNFVKDFEPRPSVTPSV
TTYINDVSPETNNFVKDFEPRPSVTPSVTTYVNDVGLETKKKFVNDFEPRPSVTPSVTAYVNVV
DPETKKKFVNDFEQRPNISACNDDDVGSKDEKPFVEDFEPRPIASVYSE

Repeat found in LOC126706446
Repeat occurs 10 times in a sequence of 336 amino acids
Location between 44521955 and 44523465
Coverage of 26.79 %
Instances:
DFEPRPSVT | DFEPRPSLT | DFEPRPSVT | DFEPRPSVT | DFEPRPSVT
DFEPRPSVT | DFEPRPSVT | DFEPRPSVT | DFEQRPNIS | DFEPRPIAS
pattern: DFE[PQ]RP[NSI][VLAI][ST]
The following known motifs were found:
FEPR was found 9 times in this sequence
MNLLCRLKRSNYFELMTVDMESRFAWLTLFLLLLFANTIESRKDPGQYWTSVMKDQPMPKAIQ
GLVHLDSSPSKLSKNDNCHTSEGAIGKDQGEKPYVKDFEPRPSVTPSVTVYVNDVGLETKNFVK
DFEPRPSLTPSLTAYVNDVGLETKNNFVKDFEPRPSVTPSVTAYINDVGLKNQNKFVKDFEPRP
SVTPSVTTYVNDVGLEIKKKFVNDFEPRPSVTPSVTAYVNDVGLETKKNFVKDFEPRPSVTPSV
TTYINDVSPETNNFVKDFEPRPSVTPSVTTYVNDVGLETKKKFVNDFEPRPSVTPSVTAYVNVV
DPETKKKFVNDFEQRPNISACNDDDVGSKDEKPFVEDFEPRPIASVYSE

Repeat found in LOC126706446
Repeat occurs 9 times in a sequence of 311 amino acids
Location between 44521955 and 44523465
Coverage of 26.05 %
Instances:
DFEPRPSVT | DFEPRPSLT | DFEPRPSVT | DFEPRPSVT | DFEPRPSVT
DFEPRPSVT | DFEPRPSVT | DFEQRPNIS | DFEPRPIAS |
pattern: DFE[PQ]RP[NSI][VLAI][ST]
The following known motifs were found:
FEPR was found 8 times in this sequence
MNLLCRLKRSNYFELMTVDMESRFAWLTLFLLLLFANTIESRKDPGQYWTSVMKDQPMPKAIQ
GLVHLDSSPSKLSKNDNCHTSEGAIGKDQGEKPYVKDFEPRPSVTPSVTVYVNDVGLETKNFVK
DFEPRPSLTPSLTAYVNDVGLETKNNFVKDFEPRPSVTPSVTTYVNDVGLEIKKKFVNDFEPRP
SVTPSVTAYVNDVGLETKKNFVKDFEPRPSVTPSVTTYINDVSPETNNFVKDFEPRPSVTPSVT
TYVNDVGLETKKKFVNDFEPRPSVTPSVTAYVNVVDPETKKKFVNDFEQRPNISACNDDDVGSK
DEKPFVEDFEPRPIASVYSE

Repeat found in LOC126706446
Repeat occurs 9 times in a sequence of 311 amino acids
Location between 44521955 and 44523465
Coverage of 26.05 %
Instances:
DFEPRPSVT | DFEPRPSVT | DFEPRPSVT | DFEPRPSVT | DFEPRPSVT
DFEPRPSVT | DFEPRPSVT | DFEQRPNIS | DFEPRPIAS |
pattern: DFE[PQ]RP[NSI][VAI][ST]
The following known motifs were found:
FEPR was found 8 times in this sequence
MNLLCRLKRSNYFELMTVDMESRFAWLTLFLLLLFANTIESRKDPGQYWTSVMKDQPMPKAIQ
GLVHLDSSPSKLSKNDNCHTSEGAIGKDQGEKPYVKDFEPRPSVTPSVTVYVNDVGLETKNFVK
DFEPRPSVTPSVTAYINDVGLKNQNKFVKDFEPRPSVTPSVTTYVNDVGLEIKKKFVNDFEPRP
SVTPSVTAYVNDVGLETKKNFVKDFEPRPSVTPSVTTYINDVSPETNNFVKDFEPRPSVTPSVT
TYVNDVGLETKKKFVNDFEPRPSVTPSVTAYVNVVDPETKKKFVNDFEQRPNISACNDDDVGSK
DEKPFVEDFEPRPIASVYSE

### Similar gene clusters

### NC_065545 - Cluster 47 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_065545 - Gene Cluster 47. Type = cyclopeptide. Location: 15579494 - 16395498 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC126710478
Repeat occurs 3 times in a sequence of 403 amino acids
Location between 16108677 and 16113110
Coverage of 4.47 %
Instances:
VSSNEV | VSSDYV | VSSDEM |
pattern: VSS[DN][YE][VM]
MVSLEVAQVMENRTKKRTRSAWDITPAQPQAKRGEVVSSNEVISRRRQASPPRRDDDREGHYV
FNLGENLTPRYKILSKMGEGTFGRVLECWDRQTREYVAIKVVRSIRKYRNAAMIEVDVLQHLAK
NDKGDSHCVQIRSWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH
DLRLIHTDLKPENILLVSSDYVRLPGYKKVSSDEMLSRCLPKSSAIKLIDFGSAAFDNQNHSSI
VSTRHYRAPEVILGLGWSYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVFGPLPEHMI
RRADKGAEKYFRRGLRLNWPEGAVSRESIRAVNKLHRLQDLVSQHVESSRFSLTDLLNGLLMYE
PSERLTARQALNHPFFNNLT

Repeat found in LOC126710478
Repeat occurs 3 times in a sequence of 402 amino acids
Location between 16108677 and 16113110
Coverage of 4.48 %
Instances:
VSSNEV | VSSDYV | VSSDEM |
pattern: VSS[DN][YE][VM]
MVSLEVAQVMENRTKKRTRSAWDITPAQPQAKRGEVVSSNEVISRRRQASPPRRDDDREGHYV
FNLGENLTPRYKILSKMGEGTFGRVLECWDRQTREYVAIKVVRSIRKYRNAAMIEVDVLQHLAK
NDKGDSHCVQIRSWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH
DLRLIHTDLKPENILLVSSDYVRLPGYKVSSDEMLSRCLPKSSAIKLIDFGSAAFDNQNHSSIV
STRHYRAPEVILGLGWSYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVFGPLPEHMIR
RADKGAEKYFRRGLRLNWPEGAVSRESIRAVNKLHRLQDLVSQHVESSRFSLTDLLNGLLMYEP
SERLTARQALNHPFFNNLT

### Similar gene clusters

### NC_065545 - Cluster 48 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_065545 - Gene Cluster 48. Type = saccharide. Location: 16620065 - 16734829 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065545 - Cluster 49 - Transporter_associated-alkaloid

### Gene cluster description

Download cluster GenBank file
NC_065545 - Gene Cluster 49. Type = transporter_associated-alkaloid. Location: 30711224 - 31262929 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/transporter_associated: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[MatE/LTP_2/ABC2_membrane/ABC_tran]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_065545 - Cluster 50 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_065545 - Gene Cluster 50. Type = saccharide. Location: 42810213 - 43250549 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters