NC_057916.1 - 95 clusters - antiSMASH results

Plant Specialized Metabolite Analysis
Version 2.0

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### Identified secondary metabolite clusters

Cluster | Type | From | To | Size (kb) | Core domains | Product/substrate predicted by subgroup | Most similar known cluster | MIBiG BGC-ID
--- | --- | --- | --- | --- | --- | --- | --- | ---
The following clusters are from record NC_057916.1:
Cluster 1 | Cyclopeptide | 3361348 | 3917325 | 555.98 | BURP | - | - | -
Cluster 2 | Saccharide | 6569530 | 6710455 | 140.93 | Aminotran_1_2, Transferase, UDPGT_2 | *saccharide-3 | - | -
Cluster 3 | Cyclopeptide | 7373822 | 7865687 | 491.87 | BURP | - | - | -
Cluster 4 | Cyclopeptide | 7587203 | 9016047 | 1428.84 | BURP | - | - | -
Cluster 5 | Fatty_acid | 15265644 | 15521190 | 255.55 | 2OG-FeII_Oxy, DIOX_N, FA_desaturase | - | - | -
Cluster 6 | Saccharide | 22072364 | 22354096 | 281.73 | Glycos_transf_1, Methyltransf_7, Transferase, p450 | - | - | -
Cluster 7 | Terpene | 37028860 | 37199112 | 170.25 | Acetyltransf_1, Chalcone_2, Lipoxygenase, Terpene_synth, Terpene_synth_C | - | - | -
Cluster 8 | Cyclopeptide | 67218117 | 68368092 | 1149.97 | BURP | - | - | -
Cluster 9 | Putative | 79965980 | 80116952 | 150.97 | 2OG-FeII_Oxy, Abhydrolase_3, DIOX_N | - | - | -
The following clusters are from record NC_057917.1:
Cluster 10 | Fatty_acid | 862354 | 1021332 | 158.98 | FA_hydroxylase, Methyltransf_11, adh_short_C2 | - | - | -
Cluster 11 | Lignan-Polyketide | 6885886 | 7200863 | 314.98 | Chal_sti_synt_C, Dirigent, Epimerase, FAE1_CUT1_RppA | - | - | -
Cluster 12 | Saccharide | 11262905 | 11474782 | 211.88 | 2OG-FeII_Oxy, DIOX_N, Glycos_transf_1, Peptidase_S10 | - | - | -
Cluster 13 | Cyclopeptide | 44439989 | 46006503 | 1566.51 | BURP | - | - | -
Cluster 14 | Cyclopeptide | 48951746 | 50573764 | 1622.02 | BURP | - | - | -
Cluster 15 | Cyclopeptide | 70922738 | 71524477 | 601.74 | BURP | - | - | -
Cluster 16 | Saccharide-Fatty_acid | 72152566 | 72335658 | 183.09 | ECH_2, Glycos_transf_1, Transferase | - | - | -
Cluster 17 | Transporter_associated | 75618046 | 75855937 | 237.89 | Amino_oxidase, MatE, Methyltransf_11, adh_short, polyprenyl_synt | - | alpha-chaconine/alpha-solanine (9% of genes show similarity) | BGC0002722.2_c1
Cluster 18 | Putative | 78016713 | 78177585 | 160.87 | ADH_N, ADH_zinc_N, AMP-binding, Epimerase, NAD_binding_1, p450 | - | - | -
Cluster 19 | Cyclopeptide | 79654083 | 80556549 | 902.47 | BURP | - | - | -
Cluster 20 | Terpene-Saccharide | 81919912 | 82141179 | 221.27 | Methyltransf_7, Terpene_synth, Terpene_synth_C, UDPGT_2, adh_short_C2 | - | - | -
Cluster 21 | Cyclopeptide | 82531192 | 82874919 | 343.73 | BURP | - | - | -
The following clusters are from record NC_057918.1:
Cluster 22 | Cyclopeptide | 7804894 | 8389451 | 584.56 | BURP | - | - | -
Cluster 23 | Cyclopeptide | 10427188 | 10990308 | 563.12 | BURP | - | - | -
Cluster 24 | Cyclopeptide | 10664185 | 11473116 | 808.93 | BURP | - | - | -
Cluster 25 | Cyclopeptide | 17538280 | 18355960 | 817.68 | BURP | - | - | -
Cluster 26 | Saccharide-Fatty_acid | 49199200 | 50181322 | 982.12 | 3Beta_HSD, FA_desaturase_2, Glyco_hydro_1, adh_short, p450 | - | - | -
Cluster 27 | Cyclopeptide | 67949266 | 68802319 | 853.05 | BURP | - | - | -
The following clusters are from record NC_057919.1:
Cluster 28 | Phenolamide | 2024489 | 2141213 | 116.72 | Orn_Arg_deC_N, Orn_DAP_Arg_deC, Transferase | - | - | -
Cluster 29 | Saccharide | 5359979 | 5455894 | 95.92 | ADH_N, ADH_zinc_N, UDPGT_2 | hydroxycinnamate | - | -
Cluster 30 | Cyclopeptide | 22147711 | 23321776 | 1174.07 | BURP, UDPGT_2 | flavonoid-3 | - | -
Cluster 31 | Saccharide | 23250823 | 23597678 | 346.86 | Dimerisation, Methyltransf_2, UDPGT_2, adh_short | flavonoid-3 | - | -
Cluster 32 | Cyclopeptide | 25431556 | 26841472 | 1409.92 | BURP | - | - | -
Cluster 33 | Saccharide | 54738521 | 55635939 | 897.42 | AMP-binding, UDPGT_2, p450 | flavonoid-5 | - | -
Cluster 34 | Cyclopeptide | 57373061 | 58251283 | 878.22 | BURP | - | - | -
Cluster 35 | Terpene | 61327517 | 61614555 | 287.04 | 2OG-FeII_Oxy, Abhydrolase_3, Terpene_synth, Terpene_synth_C | - | - | -
Cluster 36 | Saccharide | 65697890 | 65922927 | 225.04 | 2OG-FeII_Oxy, AMP-binding, DIOX_N, Glyco_hydro_1, Peptidase_S10 | - | - | -
The following clusters are from record NC_057920.1:
Cluster 37 | Phenolamide-Alkaloid | 1316794 | 1523714 | 206.92 | Methyltransf_7, Orn_Arg_deC_N, Orn_DAP_Arg_deC, Transferase, p450 | - | - | -
Cluster 38 | Putative | 13251002 | 13638835 | 387.83 | 3Beta_HSD, Aminotran_1_2, Epimerase, SE | - | - | -
Cluster 39 | Cyclopeptide | 25120812 | 26502944 | 1382.13 | BURP | - | - | -
Cluster 40 | Cyclopeptide | 63528556 | 64249252 | 720.70 | BURP, Dimerisation, Methyltransf_2, UDPGT_2 | flavonoid-8 | - | -
Cluster 41 | Transporter_associated | 64050162 | 64593860 | 543.70 | ABC_tran, Aldo_ket_red, Cellulose_synt, Dimerisation, Methyltransf_2, UDPGT_2 | flavonoid-8 | - | -
Cluster 42 | Cyclopeptide | 65589671 | 66934524 | 1344.85 | BURP | - | - | -
The following clusters are from record NC_057921.1:
Cluster 43 | Saccharide | 34519595 | 35147138 | 627.54 | 3Beta_HSD, AMP-binding, UDPGT_2 | flavonoid-2 | - | -
Cluster 44 | Cyclopeptide | 37429007 | 39197148 | 1768.14 | BURP | - | - | -
Cluster 45 | Polyketide | 44331801 | 44571859 | 240.06 | Chal_sti_synt_C, Chal_sti_synt_N, Methyltransf_3, adh_short | - | - | -
Cluster 46 | Polyketide | 45360270 | 45629350 | 269.08 | Chal_sti_synt_C, Chal_sti_synt_N, p450 | - | - | -
Cluster 47 | Terpene | 46380208 | 46749871 | 369.66 | Abhydrolase_3, Methyltransf_3, Peptidase_S10, Prenyltrans, p450 | - | - | -
Cluster 48 | Cyclopeptide | 50349953 | 51517795 | 1167.84 | BURP | - | - | -
Cluster 49 | Cyclopeptide | 57114539 | 57715099 | 600.56 | BURP | - | - | -
The following clusters are from record NC_057922.1:
Cluster 50 | Saccharide | 6175014 | 6340196 | 165.18 | Cellulose_synt, Glyco_transf_28, Lycopene_cycl, UDPGT | - | - | -
Cluster 51 | Terpene | 9876311 | 9981371 | 105.06 | 2OG-FeII_Oxy, DIOX_N, Dimerisation, Methyltransf_2, Terpene_synth, Terpene_synth_C | - | - | -
Cluster 52 | Cyclopeptide | 10035719 | 10676562 | 640.84 | BURP | - | - | -
Cluster 53 | Alkaloid | 16440142 | 16681701 | 241.56 | ADH_N, ADH_zinc_N, Epimerase, Pyridoxal_deC | - | - | -
Cluster 54 | Terpene-Saccharide | 19499917 | 19647299 | 147.38 | Glycos_transf_1, HMGL-like, Terpene_synth, Terpene_synth_C, p450 | - | - | -
Cluster 55 | Terpene | 19718789 | 19778758 | 59.97 | Terpene_synth, Terpene_synth_C, p450 | - | - | -
Cluster 56 | Cyclopeptide | 19779808 | 20363524 | 583.72 | Aldo_ket_red, BURP, Peptidase_S10, Transferase, adh_short, adh_short_C2 | - | - | -
Cluster 57 | Cyclopeptide | 20088121 | 20566428 | 478.31 | BURP | - | - | -
Cluster 58 | Saccharide | 22953178 | 23188448 | 235.27 | ADH_N, ADH_zinc_N, Aldo_ket_red, Glyco_transf_28, UDPGT, p450 | - | - | -
Cluster 59 | Saccharide | 24765099 | 25060986 | 295.89 | Glycos_transf_1, Methyltransf_11 | - | - | -
Cluster 60 | Cyclopeptide | 25295555 | 26456780 | 1161.22 | BURP | - | - | -
Cluster 61 | Saccharide | 56680214 | 56991230 | 311.02 | Aldo_ket_red, Cellulose_synt, p450 | - | - | -
The following clusters are from record NC_057923.1:
Cluster 62 | Cyclopeptide | 9916894 | 10749801 | 832.91 | BURP | - | - | -
Cluster 63 | Cyclopeptide | 10878332 | 11780508 | 902.18 | BURP | - | - | -
Cluster 64 | Cyclopeptide | 22045434 | 23499777 | 1454.34 | BURP | - | - | -
Cluster 65 | Saccharide-Alkaloid | 44987135 | 45470670 | 483.54 | 3Beta_HSD, BBE, FAD_binding_4, UDPGT_2 | small phenolic-2 | - | -
Cluster 66 | Saccharide | 53026612 | 53376757 | 350.14 | Cellulose_synt, Epimerase, Methyltransf_11 | - | - | -
The following clusters are from record NC_057924.1:
Cluster 67 | Cyclopeptide | 5398159 | 6036467 | 638.31 | BURP | - | - | -
Cluster 68 | Saccharide | 19165686 | 19477308 | 311.62 | ADH_N, ADH_zinc_N, Dimerisation, Methyltransf_2, UDPGT_2 | *saccharide-2 | - | -
Cluster 69 | Cyclopeptide | 23417688 | 24652170 | 1234.48 | BURP | - | - | -
Cluster 70 | Saccharide | 42409206 | 42634144 | 224.94 | 2OG-FeII_Oxy, DIOX_N, Glyco_hydro_1, p450 | - | - | -
Cluster 71 | Polyketide | 45224438 | 45851900 | 627.46 | Aminotran_3, Chal_sti_synt_C, Chal_sti_synt_N, p450 | - | - | -
Cluster 72 | Cyclopeptide | 52878277 | 54107725 | 1229.45 | BURP | - | alpha-chaconine/alpha-solanine (13% of genes show similarity) | BGC0002722.2_c1
Cluster 73 | Cyclopeptide | 54099330 | 55730134 | 1630.80 | BURP | - | - | -
The following clusters are from record NC_057925.1:
Cluster 74 | Cyclopeptide | 5580614 | 6578640 | 998.03 | BURP | - | - | -
Cluster 75 | Putative | 9842301 | 9971207 | 128.91 | Methyltransf_11, Peptidase_S10 | - | - | -
Cluster 76 | Saccharide | 10611907 | 11101553 | 489.65 | AMP-binding, Glyco_hydro_1, p450 | - | - | -
Cluster 77 | Terpene-Saccharide | 15272575 | 15583923 | 311.35 | Glycos_transf_1, HMGL-like, Methyltransf_7, Peptidase_S10, Terpene_synth, Terpene_synth_C | - | - | -
Cluster 78 | Cyclopeptide | 15837782 | 17494771 | 1656.99 | BURP | - | - | -
Cluster 79 | Cyclopeptide | 39901918 | 42052250 | 2150.33 | BURP | - | - | -
Cluster 80 | Cyclopeptide | 48616827 | 49469719 | 852.89 | BURP | - | - | -
Cluster 81 | Cyclopeptide | 53165472 | 53821715 | 656.24 | BURP | - | - | -
Cluster 82 | Terpene-Alkaloid | 55906936 | 56081633 | 174.70 | Cu_amine_oxid, Lipoxygenase, Terpene_synth, Terpene_synth_C | - | - | -
Cluster 83 | Saccharide | 60114885 | 60279134 | 164.25 | Glyco_hydro_1, Lipoxygenase | - | - | -
The following clusters are from record NC_057926.1:
Cluster 84 | Cyclopeptide | 9834596 | 11119523 | 1284.93 | BURP | - | - | -
Cluster 85 | Polyketide | 39617584 | 39933998 | 316.41 | Chal_sti_synt_C, Epimerase, FAE1_CUT1_RppA, Methyltransf_7, p450 | - | - | -
Cluster 86 | Putative | 42856010 | 43032626 | 176.62 | Epimerase, Oxidored_FMN, adh_short_C2, p450 | - | - | -
Cluster 87 | Cyclopeptide | 42884251 | 43547993 | 663.74 | BURP, Epimerase, Oxidored_FMN, adh_short_C2, p450 | - | - | -
Cluster 88 | Polyketide-Saccharide | 44081925 | 44260997 | 179.07 | Chal_sti_synt_C, Chal_sti_synt_N, Glyco_hydro_1, UDPGT_2 | flavonoid | - | -
Cluster 89 | Cyclopeptide | 45737661 | 46490990 | 753.33 | BURP | - | - | -
Cluster 90 | Saccharide | 48680811 | 48985047 | 304.24 | AMP-binding, Glycos_transf_1, SQS_PSY | - | - | -
Cluster 91 | Cyclopeptide | 51642916 | 52372330 | 729.41 | BURP | - | - | -
Cluster 92 | Cyclopeptide | 52430682 | 53479463 | 1048.78 | BURP | - | - | -
Cluster 93 | Cyclopeptide | 53206416 | 54308707 | 1102.29 | BURP | - | - | -
Cluster 94 | Alkaloid | 54556491 | 54629020 | 72.53 | Bet_v_1, Methyltransf_11, p450 | - | - | -
Cluster 95 | Polyketide | 56022597 | 56286971 | 264.37 | Chal_sti_synt_C, FAE1_CUT1_RppA, MatE, Methyltransf_11, Methyltransf_7, NAD_binding_1 | - | - | -

### NC_057916 - Cluster 1 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057916 - Gene Cluster 1. Type = cyclopeptide. Location: 3361348 - 3917325 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122648590
Repeat occurs 12 times in a sequence of 626 amino acids
Location between 3376004 and 3377885
Coverage of 13.42 %
Instances:
HGGGQRC | HGGGKRC | HGGGRRC | HGGGKRC | HGGGRRC
HGGGKRC | HGGGKRC | HGGTDYC | HGGGKRC | HGGGKRC
HGGGKRC | HGGGLMS |
pattern: HGG[TG][QDKLR][YMR][SC]
MDLNMTDVMFLGNGEPEKNDNFGDTALRLDCLGYETCNTARSGDSGSNHGVFSAKVPDDGCRL
VLGLGPTPSSYHGNYYPVGIRKSKESVMTSVRASSSAGDSHILKLGLSRGTGDDLGMEENSVSS
QSNLTTSFLLGQTRQFIPVVDEGSTSAKRSGGYMPSLLLAPRLDSSKVPLQTQELLERGTSILQ
PHSHLSPEPSVTTDYSTSSVSESASQHTHHPKKCKFEGCTKGARGASGLCIAHGGGQRCQKPGC
NKGAESRTAYCKAHGGGKRCQQLGCTKSAEGKTDFCIAHGGGRRCGEPGCTKAARGKSGLCIRH
GGGKRCKVDGCTRSAEGQAGLCISHGGGRRCQYPGCTKGAQGSTMHCKAHGGGKRCIFAGCTKG
AEGSTPLCKGHGGGKRCLFEGGGICPKSVHGGTDYCVAHGGGKRCAVPGCTKSARGRTDCCVRH
GGGKRCRIENCGKSAQGSTDFCKAHGGGKRCTWGQGTCEKFSRGKSGLCAAHGNMVQDQETSKG
GMIRPGLFHGLVSVSTVGSSLDEYYSSGVSANSDCDDSTEKPAKRQQLIPPQVLVPPSMKSTSS
SGLLGVEREGERSNGGRGNRNFDFMVPEGRVHGGGLMSLLGGNLRNPIDGI

Repeat found in LOC122638757
Repeat occurs 3 times in a sequence of 340 amino acids
Location between 3717847 and 3718870
Coverage of 7.94 %
Instances:
EEEEEKDDD | EEEEKDDDE | EEEKDDDEK |
pattern: EEE[EK][EDK][KD]D[ED][EDK]
MSFALKSREEEEEKDDDEKIYKRYIEIVATTLPTIEGWSGKPSYQYQGFWHNSGASGVGPLAF
QDHFKARPSDIFLASIPKCGSTWLKSLAFAVMNRKSHPPSAQPQHPLCILNSHDLVPGLEGMLY
NNNLNGSRIPNLDILPSPRLFSTHMPYTSLPQSVTLSGSRIVYICRNTNDNLVSWWHFINKVRS
NNSLEPVKLEEAIELFCKGMSSLGPFWEHVLAYWKASLERPQNVLFLKYDEMIAEPALHLKRIA
EFMGCPFSSMEEKEEVVDQIIKLCSFENLSNLAVNKTDKNGTGIPNSAFFRQGKVGDSANYLTT
EMMEQLDRITMQKLHGSGLIL

### Similar gene clusters

### NC_057916 - Cluster 2 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_057916 - Gene Cluster 2. Type = saccharide. Location: 6569530 - 6710455 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057916 - Cluster 3 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057916 - Gene Cluster 3. Type = cyclopeptide. Location: 7373822 - 7865687 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NC_057916 - Cluster 4 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057916 - Gene Cluster 4. Type = cyclopeptide. Location: 7587203 - 9016047 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NC_057916 - Cluster 5 - Fatty_acid

### Gene cluster description

Download cluster GenBank file
NC_057916 - Gene Cluster 5. Type = fatty_acid. Location: 15265644 - 15521190 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057916 - Cluster 6 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_057916 - Gene Cluster 6. Type = saccharide. Location: 22072364 - 22354096 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057916 - Cluster 7 - Terpene

### Gene cluster description

Download cluster GenBank file
NC_057916 - Gene Cluster 7. Type = terpene. Location: 37028860 - 37199112 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057916 - Cluster 8 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057916 - Gene Cluster 8. Type = cyclopeptide. Location: 67218117 - 68368092 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NC_057916 - Cluster 9 - Putative

### Gene cluster description

Download cluster GenBank file
NC_057916 - Gene Cluster 9. Type = putative. Location: 79965980 - 80116952 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057917 - Cluster 10 - Fatty_acid

### Gene cluster description

Download cluster GenBank file
NC_057917 - Gene Cluster 10. Type = fatty_acid. Location: 862354 - 1021332 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057917 - Cluster 11 - Lignan-polyketide

### Gene cluster description

Download cluster GenBank file
NC_057917 - Gene Cluster 11. Type = lignan-polyketide. Location: 6885886 - 7200863 nt. Click on genes for more information.
Show pHMM detection rules used
plants/lignan: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Dirigent]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057917 - Cluster 12 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_057917 - Gene Cluster 12. Type = saccharide. Location: 11262905 - 11474782 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057917 - Cluster 13 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057917 - Gene Cluster 13. Type = cyclopeptide. Location: 44439989 - 46006503 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122650751
Repeat occurs 3 times in a sequence of 289 amino acids
Location between 45091794 and 45093188
Coverage of 6.23 %
Instances:
RGGSEK | RGGSDK | RGGSDR |
pattern: RGGS[ED][KR]
MVSTVSGAHTATSSAPSSLVSVNLHPSLPLKLSSTNFLLWCAQFLPLLHGHNLLGYVDGSFPR
PSPVSSDGSTVLLTILLLIFGIVKKGIATVMEFRLEVHSIADALAAINSPALDEDLVLAVLRGL
RDDYKDFATSVRLRVESISFLDLLGLLLTQELYLQSSASATTSGILTANVSTRGGSEKSRGGSD
KSWSRYRGGSDRFRRSNNWNQARSPDRNRGSNNHITADLSNLAISESYNGSDGVIVGNGQALSI
TCFGSTSMVSSGHIFSHTTVLCVPSIHCNLLSIS

Repeat found in LOC122652749
Repeat occurs 14 times in a sequence of 1065 amino acids
Location between 45409215 and 45437883
Coverage of 19.72 %
Instances:
MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL
MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL
MQIFVKTLTGKTITL | MQIFVKTLTGQTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL |
pattern: MQIFVKTLTG[KQ]TITL
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK
ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE
DGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD
QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK
AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL
EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQI
FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTL
HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT
LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL
IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ
DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVES
SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKT
LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL
RLRGGMQIFVKTLTGQTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY
NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG
KQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG
IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGL

Repeat found in LOC122652749
Repeat occurs 5 times in a sequence of 381 amino acids
Location between 45409215 and 45410589
Coverage of 19.69 %
Instances:
MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGQTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL
pattern: MQIFVKTLTG[KQ]TITL
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK
ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE
DGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGQTITLEVESSDTIDNVKAKIQDKEGIPPD
QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK
AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL
EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGL

Repeat found in LOC122652749
Repeat occurs 6 times in a sequence of 457 amino acids
Location between 45421686 and 45437883
Coverage of 19.69 %
Instances:
MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL
MQIFVKTLTGKTITL |
pattern: MQIFVKTLTGKTITL
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK
ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE
DGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD
QQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK
AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL
EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQI
FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL
HLVLRLRGGL

Repeat found in LOC122652749
Repeat occurs 6 times in a sequence of 457 amino acids
Location between 45421686 and 45437883
Coverage of 19.69 %
Instances:
MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL
MQIFVKTLTGKTITL |
pattern: MQIFVKTLTGKTITL
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK
ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE
DGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD
QQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK
AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL
EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQI
FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL
HLVLRLRGGL

Repeat found in LOC122652749
Repeat occurs 6 times in a sequence of 457 amino acids
Location between 45421686 and 45437883
Coverage of 19.69 %
Instances:
MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL
MQIFVKTLTGKTITL |
pattern: MQIFVKTLTGKTITL
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK
ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE
DGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD
QQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK
AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL
EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQI
FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL
HLVLRLRGGL

Repeat found in LOC122652749
Repeat occurs 6 times in a sequence of 457 amino acids
Location between 45421686 and 45437883
Coverage of 19.69 %
Instances:
MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL
MQIFVKTLTGKTITL |
pattern: MQIFVKTLTGKTITL
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK
ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE
DGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD
QQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK
AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL
EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQI
FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL
HLVLRLRGGL

Repeat found in LOC122652749
Repeat occurs 6 times in a sequence of 457 amino acids
Location between 45421686 and 45437883
Coverage of 19.69 %
Instances:
MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL
MQIFVKTLTGKTITL |
pattern: MQIFVKTLTGKTITL
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK
ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE
DGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD
QQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK
AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL
EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQI
FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL
HLVLRLRGGL

Repeat found in LOC122652749
Repeat occurs 4 times in a sequence of 295 amino acids
Location between 45421686 and 45433649
Coverage of 20.34 %
Instances:
AKIQDKEGIPPDQQR | AKIQDKEGIPPDQQR | AKIQDKEGIPPDQQR | AKIQDKEGIPPDQQR |
pattern: AKIQDKEGIPPDQQR
MNLFGSSLTIEMFDGVRAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRL
RGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQ
LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP
PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGL

Repeat found in LOC122652749
Repeat occurs 5 times in a sequence of 381 amino acids
Location between 45421686 and 45422832
Coverage of 19.69 %
Instances:
MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL
pattern: MQIFVKTLTGKTITL
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK
ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE
EGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD
QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK
AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL
EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGL

Repeat found in LOC122652749
Repeat occurs 5 times in a sequence of 381 amino acids
Location between 45421686 and 45422832
Coverage of 19.69 %
Instances:
MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL
pattern: MQIFVKTLTGKTITL
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK
ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE
EGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD
QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK
AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL
EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGL

Repeat found in LOC122652749
Repeat occurs 5 times in a sequence of 381 amino acids
Location between 45421686 and 45422832
Coverage of 19.69 %
Instances:
MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL
pattern: MQIFVKTLTGKTITL
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK
ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE
EGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD
QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK
AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL
EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGL

Repeat found in LOC122652749
Repeat occurs 5 times in a sequence of 381 amino acids
Location between 45421686 and 45422832
Coverage of 19.69 %
Instances:
MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL
pattern: MQIFVKTLTGKTITL
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK
ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE
EGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD
QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK
AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL
EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGL

Repeat found in LOC122652749
Repeat occurs 5 times in a sequence of 381 amino acids
Location between 45421686 and 45422832
Coverage of 19.69 %
Instances:
MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL
pattern: MQIFVKTLTGKTITL
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK
ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE
EGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD
QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK
AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL
EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGL

Repeat found in LOC122652749
Repeat occurs 5 times in a sequence of 381 amino acids
Location between 45421686 and 45422832
Coverage of 19.69 %
Instances:
MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL
pattern: MQIFVKTLTGKTITL
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK
ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE
EGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD
QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK
AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL
EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGL

Repeat found in LOC122652749
Repeat occurs 5 times in a sequence of 381 amino acids
Location between 45421686 and 45422832
Coverage of 19.69 %
Instances:
MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL | MQIFVKTLTGKTITL
pattern: MQIFVKTLTGKTITL
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK
ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE
EGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD
QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK
AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL
EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGL

### Similar gene clusters

### NC_057917 - Cluster 14 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057917 - Gene Cluster 14. Type = cyclopeptide. Location: 48951746 - 50573764 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NC_057917 - Cluster 15 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057917 - Gene Cluster 15. Type = cyclopeptide. Location: 70922738 - 71524477 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122651548
Repeat occurs 5 times in a sequence of 929 amino acids
Location between 71344418 and 71347208
Coverage of 3.23 %
Instances:
SWNSVI | SWNSML | SWNSLI | SWNTFI | SWNSLI
pattern: SWN[TS][FLMV][IL]
MIAVSKLIRTLYPFQFLSYNSPIQHTFSFLFPQSLSLFISKVHFEPRASCSSVSTALNTFDKL
PQRSTSSDTILFFHASNFISSSTDRADLLSTLTNHCLALKIGALADVRTSTSLLITYSRAGDFG
SSWVLFDEMLNKDVIAWNAMFTACKDNQCFQAAVDIFMEMIKQGSEFNSTTLLIIISTLTQMND
MKLGPVIQCLSLKVGMDSDFFLSNALIDMYAKCGDLSSSEIVFAAMKFKDTTSWNSVIHGCLCN
CHHKKSLQYFKEMGCSGERADYVSFSCAISACSSSGELGAGLVIHGLGIKLGYGETSNISVANS
LISFYSHCGDLDAAETVFRGMIYKDVISWNSMLDGFAENGMILEAFDLLHEMQLIGAVQPDLVT
LVAAISLCAELNLVQEGRAIHAFMIRREMEFDCLLTNNLMDMYSKCNNVKSAKILFEIIPQRDL
VSWNSLIAGYSKNGCMREAQYLFKELLCQGLQCSLVTLLAVLSSCDSPDALQFGKLIHCWQLKL
GFTDNIFTTNALMFMYIKCGNLAASFSLLQSISVLADVASWNTFIVGCTQNGNFWKSLQVFSLM
RKETHISPDSITLVSILSACGNLNLLFLGRLLHGLTVKTPMGSQVRVMNAMLSMYSRCRDIESA
SLVFSSCPYLNQCSWDCMISGFSQNKNGGKALELLRYFEFEPTEITIISVLSACSQLGTLRHGR
QIHGLAVRFRYHWNSFVSAALVDMYSKCGRLDISIQIFQDSPKKSVASWNSLIAAYGFHSKGRK
AIKLFHEMHKSGTKATKSTFVGLLSACSHSGLIDEGYWYYSHMLDKFGVEPATEHHVCMVDMLG
RAGRLDEAYEFIKQMPTVPASGVWGALLSSCNYHGDLEMGKQVAEHLFIVEPENAGYYVSLSNM
YMAAGRWNDAVEVRRMIQDKGLKKPSGCSLIDVC

### Similar gene clusters

### NC_057917 - Cluster 16 - Saccharide-fatty_acid

### Gene cluster description

Download cluster GenBank file
NC_057917 - Gene Cluster 16. Type = saccharide-fatty_acid. Location: 72152566 - 72335658 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057917 - Cluster 17 - Transporter_associated

### Gene cluster description

Download cluster GenBank file
NC_057917 - Gene Cluster 17. Type = transporter_associated. Location: 75618046 - 75855937 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/transporter_associated: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[MatE/LTP_2/ABC2_membrane/ABC_tran]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### Similar known gene clusters

### NC_057917 - Cluster 18 - Putative

### Gene cluster description

Download cluster GenBank file
NC_057917 - Gene Cluster 18. Type = putative. Location: 78016713 - 78177585 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057917 - Cluster 19 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057917 - Gene Cluster 19. Type = cyclopeptide. Location: 79654083 - 80556549 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122651187
Repeat occurs 4 times in a sequence of 128 amino acids
Location between 79734968 and 79735355
Coverage of 25.0 %
Instances:
PTIPSMPK | PTIPTMPT | PTIPSIPK | PTIPSIPN |
pattern: PTIP[TS][IM]P[KTN]
MASKTFFIFVVTVMLLSLQSIDTCFAARNLLQTVPPAPALPTIPSMPKPTLPPPLPTTQVPPL
PKATLPPLPTGMPTIPTMPTIPSIPKVTMPPMPTIPSIPNIPSISTIIPFLPFLSPPPSTSTTS
P

Repeat found in LOC122649477
Repeat occurs 3 times in a sequence of 527 amino acids
Location between 79925206 and 79930565
Coverage of 3.42 %
Instances:
EEREDS | EERESS | EERLEK |
pattern: EER[EL][ESD][KS]
MEEREDSGPTRPVSLSWPRSPWSDFGFVLGLLRRMGCFFGCFRVKYDNQPHAHVVSDAVASKK
RDALLSGNKLGSLFLSEERESSPCKGTGCHTLGSALLERDGEVRELRDEAKFLKACGTLLETPA
EIRKALEKVKDSPTSDGDSQPSRLHSWLSSSSVKKLHWEEQPDQVSISPGKLREELGGELGSPE
HEPSSCMSKGDMVEQNFIKEDSKVSGPDTEITNPVCTINNDKLSSVTPEPLTENIQSRNKSVRF
ECEYPSDGKCFKQSDVPGSHNGSNCSPYPTPLRLTDEMQTPGTIFPVSLENHANGKNARIRSQY
VYPVLNPVENFSQWKVLTEEDGTYQQIGHQRESFEQSGHATPQRTSISLSSRSEMFHDGAATVG
KDVKLDASLAQWLKPSLPKNDKNQNSGGGSLSIGKSPKMSDEDRPIIGMVAAHWSADEISHVSP
KWWDGNGIPNSTNKYKEDQRVSWHATPFEERLEKALSEESNVYQRKHISGRPIIFEENEETDTA
VSRLHTSAQPESVVSF

Repeat found in LOC122649477
Repeat occurs 3 times in a sequence of 527 amino acids
Location between 79925206 and 79930565
Coverage of 3.42 %
Instances:
EEREDS | EERESS | EERLEK |
pattern: EER[EL][ESD][KS]
MEEREDSGPTRPVSLSWPRSPWSDFGFVLGLLRRMGCFFGCFRVKYDNQPHAHVVSDAVASKK
RDALLSGNKLGSLFLSEERESSPCKGTGCHTLGSALLERDGEVRELRDEAKFLKACGTLLETPA
EIRKALEKVKDSPTSDGDSQPSRLHSWLSSSSVKKLHWEEQPDQVSISPGKLREELGGELGSPE
HEPSSCMSKGDMVEQNFIKEDSKVSGPDTEITNPVCTINNDKLSSVTPEPLTENIQSRNKSVRF
ECEYPSDGKCFKQSDVPGSHNGSNCSPYPTPLRLTDEMQTPGTIFPVSLENHANGKNARIRSQY
VYPVLNPVENFSQWKVLTEEDGTYQQIGHQRESFEQSGHATPQRTSISLSSRSEMFHDGAATVG
KDVKLDASLAQWLKPSLPKNDKNQNSGGGSLSIGKSPKMSDEDRPIIGMVAAHWSADEISHVSP
KWWDGNGIPNSTNKYKEDQRVSWHATPFEERLEKALSEESNVYQRKHISGRPIIFEENEETDTA
VSRLHTSAQPESVVSF

Repeat found in LOC122649477
Repeat occurs 3 times in a sequence of 522 amino acids
Location between 79925206 and 79930554
Coverage of 3.45 %
Instances:
EEREDS | EERESS | EERLEK |
pattern: EER[EL][ESD][KS]
MEEREDSGPTRPVSLSWPRSPWSDFGFVLGLLRRMGCFFGCFRVKYDNQPHAHVVSDAVASKK
RDALLSGNKLGSLFLSEERESSPCKGTGCHTLGSALLERDGEVRELRDEAKFLKACGTLLETPA
EIRKALEKVKDSPTSDGDSQPSRLHSWLSSSSVKKLHWEEQPDQVSISPGKLREELGGELGSPE
HEPSSCMSKGDMVEQNFIKEDSKVSGPDTEITNPVCTINNDKLSSVTPEPLTENIQSRNKSVRF
ECEYPSDGKCFKQSDVPGSHNGSNCSPYPTPLRLTDEMQTPGTIFPVSLENHANGKNARIRSQY
VYPVLNPVENFSQWKVLTEEDGTYQQIGHQRESFEQSGHATPQRTSISLSSRSEMFHDGAATVG
KDVKLDASLAQWLKPSLPKNDKNQNSGGGSLSIGKSPKMSDEDRPIIGMVAAHWSADEISHVSP
KWWDGNGIPNSTNKYKEDQRVSWHATPFEERLEKALSEESNVYQSISVGGLSFLKRMKRLTLLY
LDYILQHNQNQ

Repeat found in LOC122649477
Repeat occurs 3 times in a sequence of 522 amino acids
Location between 79925206 and 79930554
Coverage of 3.45 %
Instances:
EEREDS | EERESS | EERLEK |
pattern: EER[EL][ESD][KS]
MEEREDSGPTRPVSLSWPRSPWSDFGFVLGLLRRMGCFFGCFRVKYDNQPHAHVVSDAVASKK
RDALLSGNKLGSLFLSEERESSPCKGTGCHTLGSALLERDGEVRELRDEAKFLKACGTLLETPA
EIRKALEKVKDSPTSDGDSQPSRLHSWLSSSSVKKLHWEEQPDQVSISPGKLREELGGELGSPE
HEPSSCMSKGDMVEQNFIKEDSKVSGPDTEITNPVCTINNDKLSSVTPEPLTENIQSRNKSVRF
ECEYPSDGKCFKQSDVPGSHNGSNCSPYPTPLRLTDEMQTPGTIFPVSLENHANGKNARIRSQY
VYPVLNPVENFSQWKVLTEEDGTYQQIGHQRESFEQSGHATPQRTSISLSSRSEMFHDGAATVG
KDVKLDASLAQWLKPSLPKNDKNQNSGGGSLSIGKSPKMSDEDRPIIGMVAAHWSADEISHVSP
KWWDGNGIPNSTNKYKEDQRVSWHATPFEERLEKALSEESNVYQSISVGGLSFLKRMKRLTLLY
LDYILQHNQNQ

### Similar gene clusters

### NC_057917 - Cluster 20 - Terpene-saccharide

### Gene cluster description

Download cluster GenBank file
NC_057917 - Gene Cluster 20. Type = terpene-saccharide. Location: 81919912 - 82141179 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057917 - Cluster 21 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057917 - Gene Cluster 21. Type = cyclopeptide. Location: 82531192 - 82874919 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122651239
Repeat occurs 9 times in a sequence of 178 amino acids
Location between 82693282 and 82694118
Coverage of 30.34 %
Instances:
GSGKGA | GSGSGR | GSGRGR | GSGKGA | GSGSGR
GSGRGR | GSGKGA | GSGSGR | GSGRGR |
pattern: GSG[KSR]G[AR]
MECVFYKLKESRSFPGQQRGYRPVSGQDPDFGQAPSSYQGQSSESRAPISAQDRGFRQGPGSS
QGPTRPASAWVQTVEGEGSGKGAWSGGGGSGSGRGRGSVEGEGSGKGAWSGGGGSGSGRGRRSV
EGEGSGKGAWSGGGGSGSGRGRVASNPDHGPSGSIYGKQVFLFFGLIVWFS

### Similar gene clusters

### NC_057918 - Cluster 22 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057918 - Gene Cluster 22. Type = cyclopeptide. Location: 7804894 - 8389451 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

No repeats detected in this cluster.

### Similar gene clusters

### NC_057918 - Cluster 23 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057918 - Gene Cluster 23. Type = cyclopeptide. Location: 10427188 - 10990308 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NC_057918 - Cluster 24 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057918 - Gene Cluster 24. Type = cyclopeptide. Location: 10664185 - 11473116 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

The following known motifs were found in CDS LOC122654590
Location between 11152655 and 11161166
.L.Y..Y was found 2 times in this sequence
Sequence:
MEGNSTGVGRVFLLSFCVAGIWSAYITQGVLQETLSTKRFGPDGKRFEHLSFLNLAQNVVCLI
WSFMMIKLWSRSRAGGAPWWSYWSAGITNTVGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGA
LVYGIKYTFPEYVCTFLVAGGVSAFALSKTSSKTISKLAQPNAPLGYGLCFLNLAFDGFTNATQ
DSITARYPKTSAWDIMLGMNLWGTIYNMIYMFGWPHGNGFETVQFCKQHPEAAWDIFLFCLCGA
VGQNFIFLTISRFGSLANTTITTTRKFVSIVVSSLLSGNPLSAKQWGSVFMVFSGLSYQIYLKW
KKLQRQQKKKAT

### Similar gene clusters

### NC_057918 - Cluster 25 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057918 - Gene Cluster 25. Type = cyclopeptide. Location: 17538280 - 18355960 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122655978
Repeat occurs 3 times in a sequence of 420 amino acids
Location between 17688044 and 17704095
Coverage of 4.29 %
Instances:
IRRWVT | IRRQIR | IRRYVR |
pattern: IRR[YQW][IV][TR]
MHSKDEEKLLKHRFSSCFDDDLRRAYADSEWTGTMAYRSWKHVLRSTGGNESHTSRLYKEAVG
RVEKKARAVYVEEDTTSKDEFVQIMIEQGCFILQVVLCSLGGPKLLGYPPNDPFFGENRWNKEQ
IRRWVTSIFSVKKQIPLVVLKVLMKQSFFQNVLKQGNWKRHNDLARMALYDFLVEPMLDNPVKN
QGNSKRRFLGFFDKRSHWHQEHPTTPLHALWLLLAGPGSRGANHVQADDQGDPYKNFTTVRSAM
ELQAAGITFRSEEGMGTRQIKFEERMLEAHLYLPCIYMEPDTMALFQSLIFYEAAVDLERNRCE
VSAYISFMKDLIRSRDDVKVLVTQGIIDTDPEYEELLPYILSKLNPLEVGNSHNLVSIRRQIRR
YVRPSIRAKMVNLVVIGVFLTLVQTIYTALSYHHPHV

Repeat found in LOC122653929
Repeat occurs 5 times in a sequence of 221 amino acids
Location between 18038157 and 18041599
Coverage of 15.84 %
Instances:
KDKEKKH | KDKEHKK | KDKDKEK | KDKEKKK | KDKSGHH
pattern: KDK[ESD][KHG][KHE][HK]
MSQDKDGSFYFDLMDPDGKKFGRGPRELTGAADLISHYKLSVHHEFFCKRSLPLSISDTHYLH
NVVGDTEIRKGEGMELDQLIQDTSYARDTNAHIRPFDLDTLKEAFLLRETTPIDLPIAEKGIPT
IAGKSKSESKDKEKKHKKHKDRDMEKDKEHKKHKHRHKDRSKDKDKEKKKDKSGHHDSGADHSK
KHHDKKRKHDGSEDLADIHKHKKTKEHKVG

### Similar gene clusters

### NC_057918 - Cluster 26 - Saccharide-fatty_acid

### Gene cluster description

Download cluster GenBank file
NC_057918 - Gene Cluster 26. Type = saccharide-fatty_acid. Location: 49199200 - 50181322 nt. Click on genes for more information.
Show pHMM detection rules used
plants/fatty_acid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[FA_desaturase/FA_desaturase_2/FA_hydroxylase/CER1-like_C]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,ECH_2]) or minimum(3,[Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,AMP-binding]))
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057918 - Cluster 27 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057918 - Gene Cluster 27. Type = cyclopeptide. Location: 67949266 - 68802319 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NC_057919 - Cluster 28 - Phenolamide

### Gene cluster description

Download cluster GenBank file
NC_057919 - Gene Cluster 28. Type = phenolamide. Location: 2024489 - 2141213 nt. Click on genes for more information.
Show pHMM detection rules used
plants/phenolamide: (minimum(2,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_Arg_deC_N,YjeF_N,Putative_PNPOx,PNP_phzG_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,Pyridoxal_deC]) or minimum(2,[MatE,Orn_Arg_deC_N,YjeF_N,Putative_PNPOx,PNP_phzG_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,Orn_DAP_Arg_deC,Orn_Arg_deC_N]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057919 - Cluster 29 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_057919 - Gene Cluster 29. Type = saccharide. Location: 5359979 - 5455894 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057919 - Cluster 30 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057919 - Gene Cluster 30. Type = cyclopeptide. Location: 22147711 - 23321776 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NC_057919 - Cluster 31 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_057919 - Gene Cluster 31. Type = saccharide. Location: 23250823 - 23597678 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057919 - Cluster 32 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057919 - Gene Cluster 32. Type = cyclopeptide. Location: 25431556 - 26841472 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NC_057919 - Cluster 33 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_057919 - Gene Cluster 33. Type = saccharide. Location: 54738521 - 55635939 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057919 - Cluster 34 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057919 - Gene Cluster 34. Type = cyclopeptide. Location: 57373061 - 58251283 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122658394
Repeat occurs 4 times in a sequence of 734 amino acids
Location between 58197526 and 58199731
Coverage of 8.17 %
Instances:
KKPVFDIPPFKPNDN | KKPVFEIPPFKPDDN | KKPVFEIPPFKPDDN | KKPGSSWIKVKRKVH |
pattern: KKP[GV][SF][ESD][IW][IP][KP][FV]K[RP][KND][DV][HN]
MRRGKSSITNFLKSVSSPLDIRTQKWSFCSSTHSDLKKPVFDIPPFKPNDNDLKKPVFEIPPF
KPDDNGMKKPVFEIPPFKPDDNDGLVRRFCRENKFKDAILLLCQQKRLREAIEILDLLDRSKTC
PAPAVYSALLQLCLQQRALKEGKRVHAHIKSSGFVPGLFISNRLIDMYSKCESLTDARELFEEM
TDRDLCSWNTLIAGYAKAGHLEEARQLFDEMPQKDNFSWSTLISGYVRYDRPNEALELYRRMQK
DEKLEGNKFTVASALSASAAIPCLRLGKEIHGHITRTGLASDAVVWSAVTSMYGKCGSVKKARH
IFDEMLDRDVVSWTTMIGRYFESGKKKEGFELFSELLSSGVRPNDFTLAGILNACSDLASEDLG
KQVHGYMTRIGFDPFPFAALVHMYSKCGNIESAKRVFEAVPQPDLLSWTSMISGYAQNGQPEEA
LRYFELLLKSGTKPDHVTFVGVLSACAHAGLVDKGLAYFHSITEKHGLTHTADHYACIIDLLGR
SARFGEAVEVIDRMPMKPDKFLWAALLGGCRIHGNLSLAKRAADALFELEPDNATTYVTLANIY
ATSSMWDEVAKIRKKMDDKGVVKKPGSSWIKVKRKVHVFLVGDRTHPKINEIYGFLEELSTRMK
EEGYAPDTNFVLHDIEEEQKEQDLTHHSEKLAIAFGIIAMPTGTPIKVFKNLRTCGDCHTAIKF
ISKIVAREIIVRDSNRFHHFKDGSCSCGDFW

### Similar gene clusters

### NC_057919 - Cluster 35 - Terpene

### Gene cluster description

Download cluster GenBank file
NC_057919 - Gene Cluster 35. Type = terpene. Location: 61327517 - 61614555 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057919 - Cluster 36 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_057919 - Gene Cluster 36. Type = saccharide. Location: 65697890 - 65922927 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057920 - Cluster 37 - Phenolamide-alkaloid

### Gene cluster description

Download cluster GenBank file
NC_057920 - Gene Cluster 37. Type = phenolamide-alkaloid. Location: 1316794 - 1523714 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/phenolamide: (minimum(2,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_Arg_deC_N,YjeF_N,Putative_PNPOx,PNP_phzG_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,Pyridoxal_deC]) or minimum(2,[MatE,Orn_Arg_deC_N,YjeF_N,Putative_PNPOx,PNP_phzG_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Transferase,Orn_DAP_Arg_deC,Orn_Arg_deC_N]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057920 - Cluster 38 - Putative

### Gene cluster description

Download cluster GenBank file
NC_057920 - Gene Cluster 38. Type = putative. Location: 13251002 - 13638835 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057920 - Cluster 39 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057920 - Gene Cluster 39. Type = cyclopeptide. Location: 25120812 - 26502944 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122662919
Repeat occurs 3 times in a sequence of 631 amino acids
Location between 26298537 and 26300433
Coverage of 3.33 %
Instances:
MYSSGFE | MYSRCFN | MYSKCEN |
pattern: MYS[KSR][GC][EF][EN]
MYAQPIKRCILTTQTGKISIRRFTAISNAGPIPTESFFPTEKTIKDLVLEGSFDQALEFYKQL
HLYGFNRNGSILLTVIKACSSSQSLLFGLQIHSFVLKIGFDRELITANSLLSMYGKCSHIEYAR
LMFETMPLRDTITLNSMITCYVRNGYYADSIKMLKEMYSSGFEPKPELVANILSVCGQTGDFRS
GKEIHARLILNGCMASSIFLSTALVDMYSRCFNLEAAFHVFNQMKERNEVSWTAMIKGCTENKS
YDLSFQAFREMQLEGIKPNRVSLIVVLPACAALGALKQGKEIHAYAFHQRFESESHFAAALIHM
YSKCENALGLAMLIFDRLGTRDVVMWSSMIRSCYQIGDGNRAMELFYQMQMEGIKPNSVTLLAI
VSASTSLFSIDNGLGVHGYIVKSGLELDVFIGNSLVDMYAKCGCLNASHQIFKEMPTKDSISWS
ALIHGYGLHGYGTKALELFHKMQQKKFEPDNITFLAVLSACKHSGLIAEGQYLYNDAIRDNKIS
LTLEHYACYIDLLGRSGKLEDACEIISHMPMEPNATIFSCLSSACKAHGRLEVAEELAYRLLKL
EPENVANYTLLCMVYAEAGNWAGVAKVREIVKMRGFRKSSGFSRIEVENRVNSNLN

### Similar gene clusters

### NC_057920 - Cluster 40 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057920 - Gene Cluster 40. Type = cyclopeptide. Location: 63528556 - 64249252 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122661542
Repeat occurs 3 times in a sequence of 189 amino acids
Location between 63848310 and 63863381
Coverage of 9.52 %
Instances:
KACEKT | KACFRC | KACFKC |
pattern: KAC[EF][KR][TC]
MATFAGTTQKCKACEKTVYLVDQHTADNKVYHKACFRCHHCKGTLKLSNYSSFEGVLYCKPHF
DQLFKMTGSLDKSFEGAPKEARVSDKGHVNSKVSSMFAGTQDKCVACKKTVYPLEKVAVDGTSY
HKACFKCTHGGCVISTSNYVAHEHRLYCKHHHSQLFKEKGNFSQLDKHEDAKGVADDAVLDA

Repeat found in LOC122661542
Repeat occurs 3 times in a sequence of 175 amino acids
Location between 63848310 and 63863381
Coverage of 10.29 %
Instances:
KACEKT | KACFRC | KACFKC |
pattern: KAC[EF][KR][TC]
MATFAGTTQKCKACEKTVYLVDQHTADNKVYHKACFRCHHCKGTLKPHFDQLFKMTGSLDKSF
EGAPKEARVSDKGHVNSKVSSMFAGTQDKCVACKKTVYPLEKVAVDGTSYHKACFKCTHGGCVI
STSNYVAHEHRLYCKHHHSQLFKEKGNFSQLDKHEDAKGVADDAVLDA

### Similar gene clusters

### NC_057920 - Cluster 41 - Transporter_associated

### Gene cluster description

Download cluster GenBank file
NC_057920 - Gene Cluster 41. Type = transporter_associated. Location: 64050162 - 64593860 nt. Click on genes for more information.
Show pHMM detection rules used
plants/transporter_associated: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[MatE/LTP_2/ABC2_membrane/ABC_tran]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057920 - Cluster 42 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057920 - Gene Cluster 42. Type = cyclopeptide. Location: 65589671 - 66934524 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122661794
Repeat occurs 3 times in a sequence of 187 amino acids
Location between 65657597 and 65658161
Coverage of 16.04 %
Instances:
NELQSLLDNT | NELHSLLDNT | NELQSLLDDT |
pattern: NEL[HQ]SLLD[ND]T
MSWSSSDNFFVSSKLEVFSVDLFSEPLELTQSKAVVFDGPKGDDFKRFLCFKNLRVNRQGKAI
VLIQKRDVDGEFLESQYDSFILETVVSLGPFGFLNVPLPIPQVVNELQSLLDNTNAELAKKNDE
LNELHSLLDNTKTDLTKKNDALNELQSLLDDTEAELANKNDALKKLKKRKIDQGWTHEQF

### Similar gene clusters

### NC_057921 - Cluster 43 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_057921 - Gene Cluster 43. Type = saccharide. Location: 34519595 - 35147138 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057921 - Cluster 44 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057921 - Gene Cluster 44. Type = cyclopeptide. Location: 37429007 - 39197148 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NC_057921 - Cluster 45 - Polyketide

### Gene cluster description

Download cluster GenBank file
NC_057921 - Gene Cluster 45. Type = polyketide. Location: 44331801 - 44571859 nt. Click on genes for more information.
Show pHMM detection rules used
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057921 - Cluster 46 - Polyketide

### Gene cluster description

Download cluster GenBank file
NC_057921 - Gene Cluster 46. Type = polyketide. Location: 45360270 - 45629350 nt. Click on genes for more information.
Show pHMM detection rules used
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057921 - Cluster 47 - Terpene

### Gene cluster description

Download cluster GenBank file
NC_057921 - Gene Cluster 47. Type = terpene. Location: 46380208 - 46749871 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057921 - Cluster 48 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057921 - Gene Cluster 48. Type = cyclopeptide. Location: 50349953 - 51517795 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122666254
Repeat occurs 4 times in a sequence of 900 amino acids
Location between 50485608 and 50490556
Coverage of 5.33 %
Instances:
QPTQNQPTQNQP | QPTQNQPTQRQP | QPTQRQPTQRRT | QPTQRRTQSRLQ |
pattern: QPTQ[NR][RQ][TP][TQ][SQ][NR][RLQ][TQP]
MASGSGFKRIDTIADSMPMAMRQSRYHMKRCFAMFTSKGKRLMKLHHLKQEINASIEDKLERA
QVLEGLLGFIICSTQEAVVVPPYVAFAVRTNPGFWEFVKVNSEDLSVDGITPAEYLKFKEMICD
EKWSTDEYAFEVDFSAFDHSIPHVTLSSSIGNGLNYISKFTTSKLAGGSESAKPLLEFLLALNH
QGENLMISETLNTVSKLEAALIVADVYLSALPKDTPYEKFEQRFAEWGFVKGWGDTAETVKETI
RSLSEVLQAPDPLNMEKLFSRLPTIFNIVIFSIHGYFGQADVLGLPDTGGQVVYILDQVKALED
ELLLRIKKQGLSVKPQILVVTRLIPDARGTKCNQELEPILNTKHSHILRVPFMTESGVLRQWVS
RFDIYPYLERFTQDATAKILDHLEGRPDLIIGNYTDGNLAASLMASKLGITQGTIAHALEKTKY
EDSDIKWKELEAKYHFSSQFTADIIAMNSADFIITSTYQEIAGSKDRPGQYESHATFTLPGLCR
VVSGINVFDPKFNIAPPGADQSVYFPYTQKQKRMTSFHPAIEELLYNKEDNDQHFGYLADRQKP
IIFSMARLDIVKNITGLTEWYGKNKRLRNLVNLVIVAGFFDPSKSNDREEMAEIKKMHDLIEKY
QLKGQIRWISAQNDRVRNGELYRCIADSKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPA
EIIVDGVSGFHVDPNNGDESSNKISDFFEKCKEDSGYWNKISTAGLQRIYECYTWKIYATKVLN
MGSIYGFWRQLNKEQKQAKQRYIQMLYSLQFKSLAKNIAIPRDGTQTQEPATKPEVKPQPTQNQ
PTQNQPTQRQPTQRRTQSRLQRDEDSEVKQLGSPTPSDNQVPTCRQWCFLFLSLSFLFYIVKKM
SGWFM

Repeat found in LOC122666254
Repeat occurs 4 times in a sequence of 892 amino acids
Location between 50485608 and 50490556
Coverage of 4.48 %
Instances:
QPTQNQPTQN | QPTQNQPTQR | QPTQRQPTQR | QPTQRDEDSE |
pattern: QPTQ[NR][DQ][EP][TD][SQ][ENR]
MASGSGFKRIDTIADSMPMAMRQSRYHMKRCFAMFTSKGKRLMKLHHLKQEINASIEDKLERA
QVLEGLLGFIICSTQEAVVVPPYVAFAVRTNPGFWEFVKVNSEDLSVDGITPAEYLKFKEMICD
EKWSTDEYAFEVDFSAFDHSIPHVTLSSSIGNGLNYISKFTTSKLAGGSESAKPLLEFLLALNH
QGENLMISETLNTVSKLEAALIVADVYLSALPKDTPYEKFEQRFAEWGFVKGWGDTAETVKETI
RSLSEVLQAPDPLNMEKLFSRLPTIFNIVIFSIHGYFGQADVLGLPDTGGQVVYILDQVKALED
ELLLRIKKQGLSVKPQILVVTRLIPDARGTKCNQELEPILNTKHSHILRVPFMTESGVLRQWVS
RFDIYPYLERFTQDATAKILDHLEGRPDLIIGNYTDGNLAASLMASKLGITQGTIAHALEKTKY
EDSDIKWKELEAKYHFSSQFTADIIAMNSADFIITSTYQEIAGSKDRPGQYESHATFTLPGLCR
VVSGINVFDPKFNIAPPGADQSVYFPYTQKQKRMTSFHPAIEELLYNKEDNDQHFGYLADRQKP
IIFSMARLDIVKNITGLTEWYGKNKRLRNLVNLVIVAGFFDPSKSNDREEMAEIKKMHDLIEKY
QLKGQIRWISAQNDRVRNGELYRCIADSKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPA
EIIVDGVSGFHVDPNNGDESSNKISDFFEKCKEDSGYWNKISTAGLQRIYECYTWKIYATKVLN
MGSIYGFWRQLNKEQKQAKQRYIQMLYSLQFKSLAKNIAIPRDGTQTQEPATKPEVKPQPTQNQ
PTQNQPTQRQPTQRDEDSEVKQLGSPTPSDNQVPTCRQWCFLFLSLSFLFYIVKKMSGWFM

Repeat found in LOC122666254
Repeat occurs 4 times in a sequence of 856 amino acids
Location between 50485608 and 50490348
Coverage of 5.61 %
Instances:
QPTQNQPTQNQP | QPTQNQPTQRQP | QPTQRQPTQRRT | QPTQRRTQSRLQ |
pattern: QPTQ[NR][RQ][TP][TQ][SQ][NR][RLQ][TQP]
MASGSGFKRIDTIADSMPMAMRQSRYHMKRCFAMFTSKGKRLMKLHHLKQEINASIEDKLERA
QVLEGLLGFIICSTQEAVVVPPYVAFAVRTNPGFWEFVKVNSEDLSVDGITPAEYLKFKEMICD
EKWSTDEYAFEVDFSAFDHSIPHVTLSSSIGNGLNYISKFTTSKLAGGSESAKPLLEFLLALNH
QGENLMISETLNTVSKLEAALIVADVYLSALPKDTPYEKFEQRFAEWGFVKGWGDTAETVKETI
RSLSEVLQAPDPLNMEKLFSRLPTIFNIVIFSIHGYFGQADVLGLPDTGGQVVYILDQVKALED
ELLLRIKKQGLSVKPQILVVTRLIPDARGTKCNQELEPILNTKHSHILRVPFMTESGVLRQWVS
RFDIYPYLERFTQDATAKILDHLEGRPDLIIGNYTDGNLAASLMASKLGITQGTIAHALEKTKY
EDSDIKWKELEAKYHFSSQFTADIIAMNSADFIITSTYQEIAGSKDRPGQYESHATFTLPGLCR
VVSGINVFDPKFNIAPPGADQSVYFPYTQKQKRMTSFHPAIEELLYNKEDNDQHFGYLADRQKP
IIFSMARLDIVKNITGLTEWYGKNKRLRNLVNLVIVAGFFDPSKSNDREEMAEIKKMHDLIEKY
QLKGQIRWISAQNDRVRNGELYRCIADSKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPA
EIIVDGVSGFHVDPNNGDESSNKISDFFEKCKEDSGYWNKISTAGLQRIYECYTWKIYATKVLN
MGSIYGFWRQLNKEQKQAKQRYIQMLYSLQFKSLAKNIAIPRDGTQTQEPATKPEVKPQPTQNQ
PTQNQPTQRQPTQRRTQSRLQRMFG

Repeat found in LOC122665901
Repeat occurs 9 times in a sequence of 216 amino acids
Location between 50811238 and 50811889
Coverage of 62.5 %
Instances:
DDDEEDEVEKVIQWA | DDDDDDDDSEEEDDD | DDDDDDDSEEEDDDD | DDDDDDSEEEDDDDE | DDDDDSEEEDDDDED
DDDDSEEEDDDDEDD | DDDSEEEDDDDEDDE | DDDDEDDEEKEKTSK | DDDEDDEEKEKTSKQ |
pattern: DDD[ESD][ESD][ESD][ESD][ESDV][ESDK][KDE][EDKV][TDKEI][TSQDE][SDKEW][QDKEA]
MSNKKGTSIVKNRTVDEVEELLLAAEDDLLLNLSLNSHLSHASSSSSPLDHDLSRRLEALKSS
KITRVPPSQPQQKEKTSAAPKSTSSSMIITNVTLPEAQKKEKSKEEEEFEKVLGADLSARFAAL
KGSSSSKTFTESQASLVRSESGDDGDDDEEDEVEKVIQWAIDTVRLDSSSPIDDNSNDDDDDDD
DSEEEDDDDEDDEEKEKTSKQRQKK

### Similar gene clusters

### NC_057921 - Cluster 49 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057921 - Gene Cluster 49. Type = cyclopeptide. Location: 57114539 - 57715099 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NC_057922 - Cluster 50 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_057922 - Gene Cluster 50. Type = saccharide. Location: 6175014 - 6340196 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057922 - Cluster 51 - Terpene

### Gene cluster description

Download cluster GenBank file
NC_057922 - Gene Cluster 51. Type = terpene. Location: 9876311 - 9981371 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057922 - Cluster 52 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057922 - Gene Cluster 52. Type = cyclopeptide. Location: 10035719 - 10676562 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122668207
Repeat occurs 4 times in a sequence of 357 amino acids
Location between 10218512 and 10223835
Coverage of 6.72 %
Instances:
EFNLVL | EFNLFS | EFNLFS | EFNVVS |
pattern: EFN[LV][FV][SL]
MELSSCASGPSAATPPALWDSSTVGPWTTTASPMTSLGMAPAPMFQSSILAPVDDMDLCLNSA
EFNLVLVLTLNQPCAAELNLVSVEFNLFSAEFNLFSVEFNVVSKGSILLVLRSGGPNVWVVKAF
CVIHPGACGTEVNVGPAAPIAEHYEQVIASDVSKPQIEHGIPHPKVRYVHTPPSMPKDELASLV
GGEGSVDLIIVAQAVHWFDFPSFYSLVNHVLRKPDGVIAVWGYRHVSVDPGFDSVMKRFNDSAL
PFFHPNIGYLEDSYRRLPFPFESVGIGSEGNPLLIDLPQETSLDGILNWLRSWSPVNTAKEKGI
DLLSEDVVKEFEAAWGGPSDSKRTVIHKAFMIAGKPRI

Repeat found in LOC122668215
Repeat occurs 8 times in a sequence of 775 amino acids
Location between 10642763 and 10645424
Coverage of 7.23 %
Instances:
DLSWNNF | DLSHNQL | DLSSGGN | DLSNNNF | DLSYNQL
DLSHNTL | DLSFNNL | DLSYNQL |
pattern: DLS[YHSFNW][NG][TNGQ][NLF]
MLPTVGDSYHRTKDYDDYYRELLNLHNLISVNISYNALNASSRTIEALCQVKSLQELDLSWNN
FEGMLPPCLHNLASLRILDLSHNQLEGNIPSSLLTSLTSLVHIYLSYNDFEGTFTFNTFANNSQ
LEVIDLSSGGNRLVVETEYPPWVPPFQLRALLLSNCNLNQKSNAFPRFLSNQYKLRKVDLRHNN
LRGKFPSWLLENNKMLRVVILKKNSLTGHFPLPSYIHRDLVGIDISNNFIDGLLQENIGHRLPY
LQYLNLSKNCFEGDIPSSIGHMKRLFILDLSNNNFTGEFPEHMARSCIHMSYLKLSYNRLHGQL
FPPFFNLTSLTSLHLDNNLFSGDILDGLSKCSYLRVLDIGNNEIIGRIPSWIGNLTSLEMLNMQ
SNLLKGNIPIEFQKLEVLNFLDLSYNQLSGSIPPLNSTSLHHLHLQGNGFTGSPPISVVNCSSL
LTSDIRDNNLYGSIPDFIGGLTDLRILLLRQNHLHGLIPDHMCQLARITIMDLSHNTLFGSIPR
CFNNITFGRIQGTSSVFDQESLGWYESDDNVYPYDVVEELGEAEEIEFITKSRSYTYKGDILNF
MSGLDLSFNNLSGEIPQELGDLNEIHALNLSYNQLTGSIPKSFSNLTQIESLDLSYNQLIEEIP
SELTILYNLAVFTVAHNNLSGKTPERKAQFATFDINSYEGNPFLCGLPLLKDCSPSVEPTNTSV
NGVKNIEDDINISIFYASFTASYVMCLLGFALVFYINPYWRRTWFYFIDKCIHSCHGFVSDAWY
NLSDHVFN

### Similar gene clusters

### NC_057922 - Cluster 53 - Alkaloid

### Gene cluster description

Download cluster GenBank file
NC_057922 - Gene Cluster 53. Type = alkaloid. Location: 16440142 - 16681701 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057922 - Cluster 54 - Terpene-saccharide

### Gene cluster description

Download cluster GenBank file
NC_057922 - Gene Cluster 54. Type = terpene-saccharide. Location: 19499917 - 19647299 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057922 - Cluster 55 - Terpene

### Gene cluster description

Download cluster GenBank file
NC_057922 - Gene Cluster 55. Type = terpene. Location: 19718789 - 19778758 nt. Click on genes for more information.
Show pHMM detection rules used
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

No significant ClusterBlast hits found.

### NC_057922 - Cluster 56 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057922 - Gene Cluster 56. Type = cyclopeptide. Location: 19779808 - 20363524 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NC_057922 - Cluster 57 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057922 - Gene Cluster 57. Type = cyclopeptide. Location: 20088121 - 20566428 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NC_057922 - Cluster 58 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_057922 - Gene Cluster 58. Type = saccharide. Location: 22953178 - 23188448 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057922 - Cluster 59 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_057922 - Gene Cluster 59. Type = saccharide. Location: 24765099 - 25060986 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057922 - Cluster 60 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057922 - Gene Cluster 60. Type = cyclopeptide. Location: 25295555 - 26456780 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122669712
Repeat occurs 4 times in a sequence of 468 amino acids
Location between 25428258 and 25450567
Coverage of 5.13 %
Instances:
TSPLPV | TSPPAV | TSPVPV | TSPPTG |
pattern: TSP[VLP][TAP][GV]
MGDMVERGRGTEEQGPSCRRDLAMVSSSSACYTSPLPVREAPPNYRPYPSPLAKYQDVIADRK
LFMDSLEKLHSTMGTKFMIPIIGGKELDLHRLFVEVTSRGGLEQVIRERRWKEVTAVFSFPSTA
TNASFVLRKYYISLLHHFEQIYFFGAQGWTSPPAVPLQTSPVPVQPQRSVEPVLPSAEAQASMT
VKRRKSCVEFSTASTSPPTGCPVVGVIDGKFEHGYLVSVMVGTQQLKGVLYHANELSVGQVPQY
SGFLANNSTRDAAAAGTGRRRRRKKSEMRRRDPAHPKPNRSGYNFFFAEQHARLKLLHPGKDRE
ISKMIGELWNKLTETEKAVYQEKGFKDKERYRSEMEVYRERQRTGSVISDAVPIQQRHVVPDVA
MVEAHPNMNAEEGDSLQTIETDTSSGLSVSEEEKTAGKDSEVEKSPVAANGSESINVAPGVSTE
GDDFELRKRDLNVDENKVQGQ

Repeat found in LOC122669712
Repeat occurs 4 times in a sequence of 469 amino acids
Location between 25428258 and 25450567
Coverage of 5.12 %
Instances:
TSPLPV | TSPPAV | TSPVPV | TSPPTG |
pattern: TSP[VLP][TAP][GV]
MGDMVERGRGTEEQGPSCRRDLAMVSSSSACYTSPLPVREAPPNYRPYPSPLAKYQDVIADRK
LFMDSLEKLHSTMGTKFMIPIIGGKELDLHRLFVEVTSRGGLEQVIRERRWKEVTAVFSFPSTA
TNASFVLRKYYISLLHHFEQIYFFGAQGWTSPPAVPLQTSPVPVQPQRSVEPVLPSAEAQASMT
VKRRKSCVEFSTGASTSPPTGCPVVGVIDGKFEHGYLVSVMVGTQQLKGVLYHANELSVGQVPQ
YSGFLANNSTRDAAAAGTGRRRRRKKSEMRRRDPAHPKPNRSGYNFFFAEQHARLKLLHPGKDR
EISKMIGELWNKLTETEKAVYQEKGFKDKERYRSEMEVYRERQRTGSVISDAVPIQQRHVVPDV
AMVEAHPNMNAEEGDSLQTIETDTSSGLSVSEEEKTAGKDSEVEKSPVAANGSESINVAPGVST
EGDDFELRKRDLNVDENKVQGQ

### Similar gene clusters

### NC_057922 - Cluster 61 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_057922 - Gene Cluster 61. Type = saccharide. Location: 56680214 - 56991230 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057923 - Cluster 62 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057923 - Gene Cluster 62. Type = cyclopeptide. Location: 9916894 - 10749801 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122670490
Repeat occurs 3 times in a sequence of 211 amino acids
Location between 10203080 and 10204300
Coverage of 11.37 %
Instances:
SSSSSHNN | SSSSHNND | SSSHNNDN |
pattern: SSS[HS][HSN][HN][ND][ND]
MGNCQAVDTATLVIQHPSGKVERLYWPVSANEVMRTNPGHHVALVLTFCLPPPSSSSSHNNDN
KHREDKEKDKQEPQQQQERPINNNNEVRITRVKVLRPTDTLVLGQAYRLVSSQEVMKGLWARKY
AKMKKERNTQSNDKPLKPRPKQQGSSPCETETESTSPQLDNPNQLQVAKNERHRPRTASASAPS
ASTRSRTWRPSLQSISEAGS

### Similar gene clusters

### NC_057923 - Cluster 63 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057923 - Gene Cluster 63. Type = cyclopeptide. Location: 10878332 - 11780508 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

No repeats detected in this cluster.

### Similar gene clusters

### NC_057923 - Cluster 64 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057923 - Gene Cluster 64. Type = cyclopeptide. Location: 22045434 - 23499777 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

No repeats detected in this cluster.

### Similar gene clusters

### NC_057923 - Cluster 65 - Saccharide-alkaloid

### Gene cluster description

Download cluster GenBank file
NC_057923 - Gene Cluster 65. Type = saccharide-alkaloid. Location: 44987135 - 45470670 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057923 - Cluster 66 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_057923 - Gene Cluster 66. Type = saccharide. Location: 53026612 - 53376757 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057924 - Cluster 67 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057924 - Gene Cluster 67. Type = cyclopeptide. Location: 5398159 - 6036467 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122639850
Repeat occurs 7 times in a sequence of 1343 amino acids
Location between 5528908 and 5548717
Coverage of 4.17 %
Instances:
IQSCFRGL | IQSHWRGW | IQSMIRYL | IQSHIRGW | IQSHWRGW
IQSHVRRW | IQSYWKGY |
pattern: IQS[HMCY][IVFW][KR][RGY][LYW]
MDGEQEQPSPNPSTLLRDISNFRTPKHSFQKPTSHSPFPLFTAPKQTPSSSSSAFRRRSSIAP
SSRSKAARKFKAFELEQSQSSRKAQIRKEKSLKSLAKSLTAWLNFLFENPKACGCDITALNGAD
RLENARTVFANGKRDSWPGVEVGVDGAWRIPKRQRDNSWQTVHLDDAEPSWSLPAFSSLEVSLR
EVCSFEDLTQRMRAYLSSGSCKEVLSVMSQVAKNIDEGRLKMKAHCPMVTDVGMKEKATRILMG
YSPIWLRIGLFIIFGGDSLLPTGGVNSDQEVLFLKMVVEKQFFSHAGLAKAYAYNKLVEGLYRP
GYFEALGNVLLKRFLLLVLILDRAKSQSSLPIIYGIDGTDGGSPLLFVSQSNIKSSQQVIRDFL
SSEVMHGEGNLLAHLVILGYKVHYQQHPILEYDFTVKELFEDLQDGIRLCRAIQLLQCDASILM
KMAVPSDTRKKNLSNCGLAMQHLKQAGVPLYDEDRGMIVAEDVANGDKELTLSMLWNIFVHLQL
PLLIKKTLLIEEIYKVKGANTDHSNNLMEMLLEWIQVICQKYDVKVNSFESLVDGKAIWCLIDH
YFRKELNQSCFHKGIQDVNYEDSILSSTDKIDTIQNFILSQKLTSILGNFPEVLQTSDILENNG
PCSERSVMVLLVFLSSQLIDRKNMDMLNLHKLLGCNCQSTHKKRLSLEKCFLNSEKLAEENGTD
EYRDAVKNFRAIQAWWEDMANQNNSCVHKPAASSVQCLVDDVTNRQYSEIQRERAAKVIQSCFR
GLIERHKFLKTKSAASLLQSGIRAWLVVKQMGTLKKASSSIIEQQPFGWQQHSHTFLRYFKFLV
DRYSFIRLRKSTLLIQQAARIWMKRRHHSKSMVSFVNKLIGGKLVVKDLQINAEGNIQVSWREL
TVHTSFSNQCIAATKIQSHWRGWFMRSKFLCQRRATIEIQSMIRYLKCRLVFQQCKLKIRSAII
IQSHIRGWVARREANKLRHRIVVIQSHWRGWLVRKYFLNQKNAIIKIQNGLQCLRCWKTFQSYR
HAAIEIQRFVRGQVDRRRLVGASCLHLVMHHTCMDEISRDTILSPELKVLLNSVLKLQRWWKNV
LLMKSRRRAAILIQSHVRRWLAKRVARREWNRVVVIQSYWKGYLARKESKEQLQDLRIRVQNSV
ANVDDSMRLINRLVTALSELLNMRSISSILHTCATLDVATKHSQKCCEKLVAAGAIGTLLKLIR
SVSRSIPDQEVLKYALSTLRNLAHYPHLAEVLIDTHGSVETFLFVVLRNKEEGYFIASELLKKL
CSTQNSLDAVHRLPALLKRLYSLAEDLKRKASNEKRTARPLALRESTERRLREAEALLKLIGAC

Repeat found in LOC122639850
Repeat occurs 7 times in a sequence of 1310 amino acids
Location between 5528908 and 5548717
Coverage of 4.27 %
Instances:
IQSCFRGL | IQSHWRGW | IQSMIRYL | IQSHIRGW | IQSHWRGW
IQSHVRRW | IQSYWKGY |
pattern: IQS[HMCY][IVFW][KR][RGY][LYW]
MDGEQEQPSPNPSTLLRDISNFRTPKHSFQKPTSHSPFPLFTAPKQTPSSSSSAFRRRSSIAP
SSRSKAARKFKAFELEQSQSSRKAQIRKEKSLKSLAKSLTAWLNFLFENPKACGCDITALNGAD
RLENARTVFANGKRDSWPGVEVGVDGAWRIPKRQRDNSWQTVHLDDAEPSWSLPAFSSLEVSLR
EVCSFEDLTQRMRAYLSSGSCKEVLSVMSQVAKNIDEGRLKMKAHCPMVTDVGMKEKATRILMG
YSPIWLRIGLFIIFGGDSLLPTGGVNSDQEVLFLKMVVEKQFFSHAGLAKAYAYNKLVEGLYRP
GYFEALGNVLLKRFLLLVLILDRAKSQSSLPIIYGIDGTDGGSPLLFVSQSNIKSSQQVIRDFL
SSEVMHGEGNLLAHLVILGYKVHYQQHPILEYDFTVKELFEDLQDGIRLCRAIQLLQCDASILM
KMAVPSDTRKKNLSNCGLAMQHLKQAGVPLYDEDRGMIVAEDVANGDKELTLSMLWNIFVHLQL
PLLIKKTLLIEEIYKVKGANTDHSNNLMEMLLEWIQVICQKYDVKVNSFESLVDGKAIWCLIDH
YFRKELNQSCFHKGIQDVNYEDSILSSTDKIDTIQNFILSQKLTSILGNFPEVLQTSDILENNG
PCSERSVMVLLVFLSSQLIDRKNMDMLNLHKLLGCNCQSTHKKRLSLEKCFLNSEKLAEENGTD
EYRDAVKNFRAIQAWWEDMANQNNSCVHKPAASSVQCLVDDVTNRQYSEIQRERAAKVIQSCFR
GLIERHKFLKTKSAASLLQSGIRAWLVVKQMGTLKKASSSIIEQQPFGWQQHSHTFLRYFKFLV
DRYSFIRLRKSTLLIQQAARIWMKRRHHSKSMVSFVNKLIGGKLVVKDLQINAEGNIQVSWREL
TVHTSFSNQCIAATKIQSHWRGWFMRSKFLCQRRATIEIQSMIRYLKCRLVFQQCKLKIRSAII
IQSHIRGWVARREANKLRHRIVVIQSHWRGWLVRKYFLNQKNAIIKIQNGLQCLRCWKTFQSYR
HAAIEIQRFVRGQVDRRRLVVLKLQRWWKNVLLMKSRRRAAILIQSHVRRWLAKRVARREWNRV
VVIQSYWKGYLARKESKEQLQDLRIRVQNSVANVDDSMRLINRLVTALSELLNMRSISSILHTC
ATLDVATKHSQKCCEKLVAAGAIGTLLKLIRSVSRSIPDQEVLKYALSTLRNLAHYPHLAEVLI
DTHGSVETFLFVVLRNKEEGYFIASELLKKLCSTQNSLDAVHRLPALLKRLYSLAEDLKRKASN
EKRTARPLALRESTERRLREAEALLKLIGAC

Repeat found in LOC122639850
Repeat occurs 7 times in a sequence of 1339 amino acids
Location between 5528908 and 5548717
Coverage of 4.18 %
Instances:
IQSCFRGL | IQSHWRGW | IQSMIRYL | IQSHIRGW | IQSHWRGW
IQSHVRRW | IQSYWKGY |
pattern: IQS[HMCY][IVFW][KR][RGY][LYW]
MDGEQEQPSPNPSTLLRDISNFRTPKHSFQKPTSHSPFPLFTAPKQTPSSSSSAFRRRSSIAP
SSRSKAARKFKAFELEQSQSSRKAQIRKEKSLKSLAKSLTAWLNFLFENPKACGCDITALNGAD
RLENARTVFANGKRDSWPGVEVGVDGAWRIPKRQRDNSWQTVHLDDAEPSWSLPAFSSLEVSLR
EVCSFEDLTQRMRAYLSSGSCKEVLSVMSQVAKNIDEGRLKMKAHCPMVTDVGMKEKATRILMG
YSPIWLRIGLFIIFGGDSLLPTGGVNSDQEVLFLKMVVEKQFFSHAGLAKAYAYNKLVEGLYRP
GYFEALGNVLLKRFLLLVLILDRAKSQSSLPIIYGIDGTDGGSPLLFVSQSNIKSSQQVIRDFL
SSEVMHGEGNLLAHLVILGYKVHYQQHPILEYDFTVKELFEDLQDGIRLCRAIQLLQCDASILM
KMAVPSDTRKKNLSNCGLAMQHLKQAGVPLYDEDRGMIVAEDVANGDKELTLSMLWNIFVHLQL
PLLIKKTLLIEEIYKVKGANTDHSNNLMEMLLEWIQVICQKYDVKVNSFESLVDGKAIWCLIDH
YFRKELNQSCFHKGIQDVNYEDSILSSTDKIDTIQNFILSQKLTSILGNFPEVLQTSDILENNG
PCSERSVMVLLVFLSSQLIDRKNMDMLNLHKLLGCNCQSTHKKRLSLEKCFLNSEKLAEENGTD
EYRDAVKNFRAIQAWWEDMANQNNSCVHKPAASSVQCLVDDVTNRQYSEIQRERAAKVIQSCFR
GLIERHKFLKTKSAASLLQSGIRAWLVVKQMGTLKKASSSIIEQQPFGWQQHSHTFLRYFKFLV
DRYSFIRLRKSTLLIQQAARIWMKRRHHSKSMNKLIGGKLVVKDLQINAEGNIQVSWRELTVHT
SFSNQCIAATKIQSHWRGWFMRSKFLCQRRATIEIQSMIRYLKCRLVFQQCKLKIRSAIIIQSH
IRGWVARREANKLRHRIVVIQSHWRGWLVRKYFLNQKNAIIKIQNGLQCLRCWKTFQSYRHAAI
EIQRFVRGQVDRRRLVGASCLHLVMHHTCMDEISRDTILSPELKVLLNSVLKLQRWWKNVLLMK
SRRRAAILIQSHVRRWLAKRVARREWNRVVVIQSYWKGYLARKESKEQLQDLRIRVQNSVANVD
DSMRLINRLVTALSELLNMRSISSILHTCATLDVATKHSQKCCEKLVAAGAIGTLLKLIRSVSR
SIPDQEVLKYALSTLRNLAHYPHLAEVLIDTHGSVETFLFVVLRNKEEGYFIASELLKKLCSTQ
NSLDAVHRLPALLKRLYSLAEDLKRKASNEKRTARPLALRESTERRLREAEALLKLIGAC

### Similar gene clusters

### NC_057924 - Cluster 68 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_057924 - Gene Cluster 68. Type = saccharide. Location: 19165686 - 19477308 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057924 - Cluster 69 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057924 - Gene Cluster 69. Type = cyclopeptide. Location: 23417688 - 24652170 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122641038
Repeat occurs 9 times in a sequence of 445 amino acids
Location between 23896413 and 23900367
Coverage of 30.34 %
Instances:
MGGAPPNQMPNMGGA | MGGAPPNQMPNMGGA | MGGAPPNQMPNMGGA | MGGAPPNQMPNMGGA | MGGAPPNQMPNMGGA
MGGAPPNPMYNRGGP | MGGVPPNPNPMQNMG | MGGPPSNPMPNMGGM | MGGMQSVQNQMPRDA |
pattern: MGG[MPAV][QP][SP][NV][QP][NM][QYP][NM][QMRP][NGR][DGM][MGAP]
MAVASLCRTLISKPSVAAIFSRSFTSSSISVPSLALTSRYSSPLLRIRPLVTALTEFHRFLPV
GLRCFATRQTASSLNDPNPNWSNRPPKETILLDGCDFEHWLIVMEKPEGEPTRDEIIDSYIKTL
ATVVGSEDEARMKIYSVSTRHYFAFGALVSEELSYKLKEVPRVRWVLPDSYLDVRNKDYGGEPF
INGQAVPYDPKYHEEWVRNNARANERSRRNDRPRNFDRSRNFERRRENMQNRDFQNREMGGAPP
NQMPNMGGAPPNQMPNMGGAPPNQMPNMGGAPPNQMPNMGGAPPNQMPNMGGAPPNPMYNRGGP
SPNPMPNMGGVPPNPNPMQNMGGPPSNPMPNMGGMQSVQNQMPRDAGPGAGFPNMHNRETGGMP
QRDFQNRDAARSEGMPYQSRDMPTGSMPNRDYQGNYTPNRDMESTPSGNPYQVRDMPGRDYQ

Repeat found in LOC122641038
Repeat occurs 7 times in a sequence of 429 amino acids
Location between 23896413 and 23900367
Coverage of 9.79 %
Instances:
MPNMGG | MPNMGG | MPNMGG | MPNMGG | MPNMGG
MPNMGG | MPNRDY |
pattern: MPN[MR][DG][GY]
MAVASLCRTLISKPSVAAIFSRSFTSSSISVPSLALTSRYSSPLLRIRPLVTALTEFHRFLPV
GLRCFATRQTASSLNDPNPNWSNRPPKETILLDGCDFEHWLIVMEKPEGEPTRDEIIDSYIKTL
ATVVGSEDEARMKIYSVSTRHYFAFGALVSEELSYKLKEVPRVRWVLPDSYLDVRNKDYGGEPF
INGQAVPYDPKYHEEWVRNNARANERSRRNDRPRNFDRSRNFERRRENMQNRDFQNREPNQMPN
MGGAPPNQMPNMGGAPPNQMPNMGGAPPNQMPNMGGAPPNPMYNRGGPSPNPMPNMGGVPPNPN
PMQNMGGPPSNPMPNMGGMQSVQNQMPRDAGPGAGFPNMHNRETGGMPQRDFQNRDAARSEGMP
YQSRDMPTGSMPNRDYQGNYTPNRDMESTPSGNPYQVRDMPGRDYQ

Repeat found in LOC122638780
Repeat occurs 6 times in a sequence of 1042 amino acids
Location between 24562269 and 24565918
Coverage of 4.03 %
Instances:
IPSSISN | IPSSVGK | IPSSIGN | IPSSIGN | IPSLSIS
IPSSIGD |
pattern: IPS[SL][SIV][SGI][KSND]
MALLQLILVFILLFAGSSSLRLVESVIGSGTGRMMILDRQNETDRLSLLEFKKQTYDPYEALS
SWNDSIHFCNWEGITCGHRHQQRVIRLDLQGKGLGGNISRSIGNLTFLHFLNIANNSFHGKIPQ
EVGNLIRLQYIVFHNNTLEGELPTSLANCTRLREIRFSYNNLMGKIPVELFRSLLKLEIIYITK
NGFTGEIPASLGNISSLRVIHLSENGLQGSIPESFGQLTNLYFLALSLNKLVGMIPVSLYNLSS
LEMISLPFNQLHGSLPRDIGLTLPNLKKLAIAHNLFLGSIPSSISNISTFELIDLGANSFVGPI
PNNLGNLQNLQWFSISENQCGTGEADDLDFVKSLVNCTNLEILDLTDNGFKGPIPNFKANLSTQ
LSMIFLGGNQISGIIPTRIENLVNLTFLSMENNFLEGNIPSSVGKLPKLQRLSLDGNRLSGHIP
SSIGNLTVLYELYLDANNLNGSIPSSIGNCQQLQYLTFSNNNLQGPVPKQLFLIPSLSISLNLS
SNSLVGSLPIEIGNLKSLSTIDISKNRLSGEIPSSIGDCNSLEHLYMGGNFFEGTVPQSLTLLK
GLRDLDLSHNNLSGQIPKDLQNLLALWSLNLSFNSLEGEVPTKGIFGNKSAILVNGNDKLCGGI
AELHLPACKKHRSTKREKSNAIRIGLAIIVVVLAFLLIFSFLTFYWIRRSKSKPQSTSLIGEQF
LKLSYKELFQATGGFASANFIGSGSFGSVYKGIINQDETIVAVKVLNLQNPIAYKSFLAECEAL
RNIRHRNLVKILTSCSSLDSKGKDFKALVYEFMPNESLDDWLHLPMESNNHSRSLSLLQRLNIA
IDVASALDYLHYHCYATIVHCDLKPSNILLDSDMAAHVSDFGLMRLLLEPDDNSSQNRTSTIGI
KGSIGYTAPEYGMGGRASIQGDMFSYGILLLEMFTGKRPTYQMFTDDLNLHNFAKAALPTHVMQ
ILDPTLLPKEEQIEEDVINKTEGPSHMTDNLQDCITSIIEIAVKCSMELPRERMNMNDVLRGLH
LIKGKISRNKNISIESNHA

### Similar gene clusters

### NC_057924 - Cluster 70 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_057924 - Gene Cluster 70. Type = saccharide. Location: 42409206 - 42634144 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057924 - Cluster 71 - Polyketide

### Gene cluster description

Download cluster GenBank file
NC_057924 - Gene Cluster 71. Type = polyketide. Location: 45224438 - 45851900 nt. Click on genes for more information.
Show pHMM detection rules used
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057924 - Cluster 72 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057924 - Gene Cluster 72. Type = cyclopeptide. Location: 52878277 - 54107725 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122641072
Repeat occurs 7 times in a sequence of 747 amino acids
Location between 53682791 and 53685035
Coverage of 6.56 %
Instances:
VSWNTMI | VSWNSML | VSWNLML | VSWVTML | VSWTTMI
VSWNTMI | VSWNSLI |
pattern: VSW[TNV][TSL][LM][IL]
MRSAVKSIGESGSLVFNQNLKIAQLGKCGRIEEAIKIFEKMANRNTVTWNSMISAYAKNGRIN
DARRLFDQMRLKNLVSWNTMIAGYLHNDQIHEASELFGKMPKRDIFSWTLMITCYTRSGELEKA
RYFFDRLPDKGNRVCWNAMITGYVKNQRLEEARKLFDQMPVRDMVSWNSMLAGYTQNGEIGMGL
KFFDQMEERDVVSWNLMLDGFVQACDLDSAWQFFLRIPSPNIVSWVTMLSGYARNGHIAEAQKI
FEQTPEKNVVAWNAMLAGYVQNGEIDEAIRLFRQMPEKNSVSWTTMINGYVRVGKLNEARELLN
SMPYRNVAAQTAMISGYVQSMRMDDARDIFDNVGSRDVVCWNTMIAGYALSRRMDEAIKLFKQM
SQKDIVSWNTMIAGYAQEDQMDKALQIFEEMVERNTVSWNSLISGFTQNGLCTDALQHFVLMMR
EGKKPDQSTFATSLSACANLAALQVGKQLHHLVMKLGYVIDLFVGNALITMYAKCGRVLSAEEV
FNDINSVDIISWNSLIAGYALNGYGKEAIQLFQEMEMIGVAPDQVTFVGLLSACSHAGLIDQGL
KLFKSMTDDYSVEPVAEHYACMVDLLGRAGRLEEAYQLVMKMPIRANAGTWGALLGACRMYRNL
ELGKFAAERLSEFEPHKTSNYVLLSNIHAEAGRWEEVERVRMLMKERGVEKQPGCSWIDVKNQV
HTFISDDPALPRAAYICETLRNLTEQMKTRGYMPDINFSLLDCG

### Similar gene clusters

### Similar known gene clusters

### NC_057924 - Cluster 73 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057924 - Gene Cluster 73. Type = cyclopeptide. Location: 54099330 - 55730134 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122639106
Repeat occurs 3 times in a sequence of 244 amino acids
Location between 54385257 and 54386037
Coverage of 18.44 %
Instances:
MEGDYGVKYMFQKLN | MEGDYGVKNMFQKLN | MEGDYGVKNMFEKLN |
pattern: MEGDYGVK[NY]MF[EQ]KLN
MEGDYGVKYMFQKLNDLGGKSGDQAMNYMSEKVKAIGGMEGDYGVKNMFQKLNDLGGKNGDQA
MNYMTEKVKAIGGMEGDYGVKNMFEKLNDLGGKNGDQAMNYMSEKVKAVRGIEGEKILQYLMEK
LHKIDEILPERMKNATLQDWIIWVVVALTVALLIRICYCCFPCLCRIFFKMMEALVLFISRCFC
FGGRSAFKMMKAPGTIGIYILRAPFGNNPAAYFRLLRAGAPVGHMFRPCTSMV

### Similar gene clusters

### NC_057925 - Cluster 74 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057925 - Gene Cluster 74. Type = cyclopeptide. Location: 5580614 - 6578640 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NC_057925 - Cluster 75 - Putative

### Gene cluster description

Download cluster GenBank file
NC_057925 - Gene Cluster 75. Type = putative. Location: 9842301 - 9971207 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057925 - Cluster 76 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_057925 - Gene Cluster 76. Type = saccharide. Location: 10611907 - 11101553 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

No significant ClusterBlast hits found.

### NC_057925 - Cluster 77 - Terpene-saccharide

### Gene cluster description

Download cluster GenBank file
NC_057925 - Gene Cluster 77. Type = terpene-saccharide. Location: 15272575 - 15583923 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057925 - Cluster 78 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057925 - Gene Cluster 78. Type = cyclopeptide. Location: 15837782 - 17494771 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NC_057925 - Cluster 79 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057925 - Gene Cluster 79. Type = cyclopeptide. Location: 39901918 - 42052250 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NC_057925 - Cluster 80 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057925 - Gene Cluster 80. Type = cyclopeptide. Location: 48616827 - 49469719 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122641388
Repeat occurs 3 times in a sequence of 570 amino acids
Location between 48705200 and 48706913
Coverage of 3.16 %
Instances:
AMQLHA | AMQLQE | AMQVFE |
pattern: AMQ[LV][HFQ][EA]
MEISTMTHAMQLHAQMIKTGKQDNYVNLNNLFTFSALSPSGNLTYARQVFNSLQTPNSYFWNT
MIRGYAKSPEPDQALHLFLAMQLQEDAPNPDNFTFPFVLKSCTRLHRTREGRQLHAVIYKAGLQ
SDQFVQNSLIHMYSSCGESTFAMQVFEKMSDRNVVSWTSIIDGLVDDDRPFEALHMFARMEDDG
VAPNDATVVSVLRACADVGAMGIGQKVHKLVEHSEIASRANVCTALIDMYAKCGCIDSARRVFD
AIVNKDVFVWTAMISGLASHGQCREAIDLFNEMREANLRMDARTVTAVLSAYRNAGWVTEGHHF
FNDMEIKYGIRPTIQHYGCMADLLARTGHLEDAEEFIKSMPVEPDVILWRTLIWACRVYGDIER
GERLMSHLQPMKTDSNDCGSYVLLGNVYALAGKWREKAKMREFMNQKRLAKPPGSSKVEVNGVI
HEFVAGDSSHPEAEKIYRRLDEITERLREEGYHPKVSEVLLDIEDEEKVTQLQHHSEKLAVAFG
LINSRTGTKIRVVKNLRSCADCHSVMKLISKIYQQEIVIRDRIQFHHFKNGQCSCGDYW

### Similar gene clusters

### NC_057925 - Cluster 81 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057925 - Gene Cluster 81. Type = cyclopeptide. Location: 53165472 - 53821715 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NC_057925 - Cluster 82 - Terpene-alkaloid

### Gene cluster description

Download cluster GenBank file
NC_057925 - Gene Cluster 82. Type = terpene-alkaloid. Location: 55906936 - 56081633 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))
plants/terpene: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Terpene_synth/Terpene_synth_C/Prenyltrans/SQHop_cyclase_C/SQHop_cyclase_N/PRISE]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057925 - Cluster 83 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_057925 - Gene Cluster 83. Type = saccharide. Location: 60114885 - 60279134 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057926 - Cluster 84 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057926 - Gene Cluster 84. Type = cyclopeptide. Location: 9834596 - 11119523 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122646200
Repeat occurs 6 times in a sequence of 1112 amino acids
Location between 10428568 and 10431907
Coverage of 3.24 %
Instances:
TYNTLI | TYNLMM | TYNTLL | TYNTVI | TYNLLL
TYNALI |
pattern: TYN[TLA][LMV][ILM]
MTVMELCSSRICGSNIRCGVRTDSKPSILNDYIFFRRKTMGNLKVFSCGFLLNGKKNWKNQVG
FCGFVIGNSYVVMGMKERAKDRLHPDKVIQILKSMSEPIQAFSFFKSVAQRPLVVHSTESCNYM
LELLRVHGKVGEMAVVFDLMQKQIIKRNLETYLTIFKSLSVRGGICQAPFALERMSKAGFVLNA
FSYNGLIHLLLQSGFLREAMLVYRRMVSERIKPSLKTYSALMVASGKRKDTKTVMNLLEEMESI
GLRPNIYTFTICIRVLGRAGKIDEACGILKRMDEEGCGPDVVTYTVLIDALCNAGRLDTAKKLF
LKMKSSSHKPDRVTYITLLDKFSDFGDFDSVREFWTQMEADGYVADVVAFTILVDGLCKAYKID
EAFGTLDVMRKKGVKPNLYTYNTLISGLLRVNRLNEALELFNSMESQGLEPTAFTYILFIDYYG
KLGESGKAVETFEKMKNMGIVPNVVACNASLYSLAEQGNIGHARNVFNGLKNHGLTPDAITYNL
MMKCYCKAGKIDESVKLLSEMMGNGCDPDEITFNSLIDSLYKAHQVDEAWKMFHRMKKMKLVPT
VVTYNTLLAGLGKEGRVQKAIELFESMRTYGVPPNTVTFNTLLDCLCKNGEVKWALEMFSGMTK
MECWPDVFTYNTVIYGLVKENRADYAFWIFHQMRKLFYPDFVTLCTLLPVVVKSGQIQDAFKIV
EKFFYQVGYEAERTSWENLMEAILCEAGIELSIIFSERLVSAGICKDDSILIPLLKCLFRHNKA
ADANKLFDKFTKMSGITATLEVYNSLMEGLLANQLTEMAWALFEEMKKAACAPDIFTYNLLLDS
LGKSERIDELYKLRGEMLARGCQPNTITHNIVISSLVKSNMLDEAIDLYYDLMSGDFTPSPCTY
GPLIDGLSKSGRVEEAKQFFEEMVEYGCKPNCAVYNILINGFGKVGDVETACLLFERMRKEGIR
PDVKTYTILVDCLCMVGKDGDALHYFVELKLTGLDPDLVAYNLMIDGLGKSLRVEEALSLFHEM
QNRGISPDLYTCNSLILNLGKVGMVEEARKIYEELQLKGLEPNVFTYNALIRGYSMSGNLDHAY
AVYEKMMVRGCTPNKETIAHLPNQS

### Similar gene clusters

### NC_057926 - Cluster 85 - Polyketide

### Gene cluster description

Download cluster GenBank file
NC_057926 - Gene Cluster 85. Type = polyketide. Location: 39617584 - 39933998 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057926 - Cluster 86 - Putative

### Gene cluster description

Download cluster GenBank file
NC_057926 - Gene Cluster 86. Type = putative. Location: 42856010 - 43032626 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057926 - Cluster 87 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057926 - Gene Cluster 87. Type = cyclopeptide. Location: 42884251 - 43547993 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

### Similar gene clusters

### NC_057926 - Cluster 88 - Polyketide-saccharide

### Gene cluster description

Download cluster GenBank file
NC_057926 - Gene Cluster 88. Type = polyketide-saccharide. Location: 44081925 - 44260997 nt. Click on genes for more information.
Show pHMM detection rules used
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057926 - Cluster 89 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057926 - Gene Cluster 89. Type = cyclopeptide. Location: 45737661 - 46490990 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

The following known motifs were found in CDS LOC122646085
Location between 46353799 and 46368236
.L.Y..Y was found 2 times in this sequence
Sequence:
MSSTEIVKNRHLGFLIWQSVHSTILFLFCKIFLLSPFSNNPLSPSIFTFLSFLTFHLSLVLFS
TSLLLVSSSQPDRPASIYELILFLLRFLLNSVLGGGGSPELSAPSFRSRVRTSLGFLLFVIISA
ASGFVSVASVCRNSEAISGLPLIGIGLRGSVFGLLYGVYYIYKQRWVLGFPIIQRPPFFSFKMG
LPSAFKQALKLSTVALLCSSVLDVALPSQYKSQGTMVQFIVNQIIFYIGSSMVSFCWELCHHLH
QVVHTKRYIFAPPKGSAAAETNPSEPLLAALEESTPRSLLQYLAYLDLCIICESNVDIWRRAAF
FEETGETYKRVVAVCLRPLEQLTSNLGEGLEGCSGDRTDQLSHQLLSPADTRMDSKLNESFNDF
QLCAWCAMTIAALTARSHSEDRFGVAQLTGCNAAVVSTLLSSLVAVEACMGKKTNVQTPHLMGP
ASIKWAALNTGRRDGPPSIAGKKRGGPLHAKAYAMADIIRTSIYSIVSVFHDEMLGSMKAGVLE
KDWITDSKPLFGTREILVQKLGLFLDFQAN

### Similar gene clusters

### NC_057926 - Cluster 90 - Saccharide

### Gene cluster description

Download cluster GenBank file
NC_057926 - Gene Cluster 90. Type = saccharide. Location: 48680811 - 48985047 nt. Click on genes for more information.
Show pHMM detection rules used
plants/saccharide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Glycos_transf_1/Glycos_transf_2/Glycos_transf_28/UDPGT/UDPGT_2/Glyco_hydro_1/Cellulose_synt]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057926 - Cluster 91 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057926 - Gene Cluster 91. Type = cyclopeptide. Location: 51642916 - 52372330 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122645319
Repeat occurs 7 times in a sequence of 385 amino acids
Location between 51921944 and 51923102
Coverage of 10.91 %
Instances:
PVQPVV | PVQPNV | PVQSEV | PVQPEV | PVQPEV
PVQPEV | PVQAEE |
pattern: PVQ[SAP][ENV][EV]
MEGGKNSTMEMFYYGECMKNHKISSGKIVTDGCCEFWPINDTPDSLLCSVCGCHRNFHKRTLF
ICSSERIEEPASAQPVVSPALPVIPPVQPVVSPAQPVVSPVQPNVRSDERKRRGKQPMVPPVLP
EGPPVQSEVPPVQPEVPSDERKRRGKQPVVAPVQPEVRSDERKRRGKQPLEPPVQPEVRSEERK
RRGKQPVVPPLQAEMPPVQAEEATEERKRRRRQEEDESRRPLRIVMALRAVPKPVVYDVEPLAM
IPPGEEFPVYDWMKKTRVRFNDVQKERMRGFAEDLGWKMVKERSSEIDRFCDEIRVPRNTFKIW
MNNHKNNNNNNNNNSSMVASTSLAPPGPADVENQDIASSSMPPAEPPEPDETYNDEDNASSPES
QN

### Similar gene clusters

### NC_057926 - Cluster 92 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057926 - Gene Cluster 92. Type = cyclopeptide. Location: 52430682 - 53479463 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122645900
Repeat occurs 4 times in a sequence of 600 amino acids
Location between 52835219 and 52846266
Coverage of 4.0 %
Instances:
TALHIA | TALHEA | TALDIA | TALRIN |
pattern: TAL[HDR][EI][NA]
MDPDLYRAVTEGNSTLLLQLLEASKEDYQQEEQSDQNMNTLLHIAAHSNNVQIVKVIREKQPP
TILRKRNYREDTALHIAARHNNAEVVKYLLRWAKETDEAENPSIRYHTVKFRNRCGNTALHEAV
LGSHHEVIEVLMDWDTEAILIKNKRKESPLYLAADRGLHAVLEKMLKVAVENEIFKNVYLRIYY
GPDGRTPLHAAVAKKHPLCINILLDKKKELISKADADGRTPLHYAASFGHFEEARCLLQKDTSI
AHEMDDQGHCPIHVAASKGYIDIIQAIPEYCPGARETSNEKGQNIVHLAAKNGRSNLITYMLQQ
KSKFGKLINAKDINGNTPLHLATKNSHPKVVCILMRDNVDMTIMNDEGLTALDIAEKKQMDDTI
SFPKVLTLTALRINNAPSGRPPPIIEKNKSKGNLKKEYYEKKFKERFSTLVLVATLISTVTFTA
GFTIPGGYNNDGPYKGMATLLKKPAFHVFVICNTMALYLSIVVVGNNIWAQLDDSPFLILAVNL
SVPFLGIALIMMAIGFAAGLYSVILKLQWLAFLVLVIGAIFLLYIIILLLLFNVRRMSKYPVLR
HICKLGFYLMIFTFDRFMTTQTVDH

### Similar gene clusters

### NC_057926 - Cluster 93 - Cyclopeptide

### Gene cluster description

Download cluster GenBank file
NC_057926 - Gene Cluster 93. Type = cyclopeptide. Location: 53206416 - 54308707 nt. Click on genes for more information.
Show pHMM detection rules used
plants/cyclopeptide: (BURP)

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Repeatfinder output

Repeat found in LOC122646247
Repeat occurs 3 times in a sequence of 622 amino acids
Location between 53783119 and 53786625
Coverage of 3.38 %
Instances:
TPRPSNL | TPRGSNF | TPRPSNF |
pattern: TPR[GP]SN[LF]
MITWKDLYTVLTAVVPLYVAMILAYGSVRWWKIFTPDQCSGINRFVAIFAVPLLSFHFISTND
PYSMNFRFIAADTLQKIILLVVLGIWTNFTRNGSLEWMITIFSLSTLPNTLVMGIPLLIAMYGD
YSGNLMVQVVVLQCIIWYTLLLFLFEYRGAKMLIMEQFPDTAASIVSFKVDSDIMSLDGRDFLE
TEAEIGDDGKLHVSVRKSNASRRSLALTPRPSNLTGAEIYSLSSSRNPTPRGSNFNNADFYSMM
GCQGFPARHSNFGSTDLYSVQSSRGPTPRPSNFEENCAPGAQALGSPRFGFYPAAPTANSYPTP
NPDISAPAPATNNKNPNSTKQQQQQMQVQVQSKANTHDAKELHMFVWSSSASPVSEGGGLHVFG
GTDFGSAEQSGRSDQGAKEIRMLVTDHPQNRGDKEATPENEDFGGEDFSFPGGEDREKEGIADL
TKLGSSSTKELHPKATEISDSGAGKQMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLIA
YRWHVSMPKIIGKSISILSDAGLGMAMFSLGSTTSRDSPFCVRQRVQCPSSYPQHCGHIWDAYS
FADHLSLLHCSGTMKYYNLREVFQEENHRTKEEYLKRLMEIQTTHSG

Repeat found in LOC122646247
Repeat occurs 3 times in a sequence of 551 amino acids
Location between 53784373 and 53786625
Coverage of 3.81 %
Instances:
TPRPSNL | TPRGSNF | TPRPSNF |
pattern: TPR[GP]SN[LF]
MITWKDLYTVLTAVVPLYVAMILAYGSVRWWKIFTPDQCSGINRFVAIFAVPLLSFHFISTND
PYSMNFRFIAADTLQKIILLVVLGIWTNFTRNGSLEWMITIFSLSTLPNTLVMGIPLLIAMYGD
YSGNLMVQVVVLQCIIWYTLLLFLFEYRGAKMLIMEQFPDTAASIVSFKVDSDIMSLDGRDFLE
TEAEIGDDGKLHVSVRKSNASRRSLALTPRPSNLTGAEIYSLSSSRNPTPRGSNFNNADFYSMM
GCQGFPARHSNFGSTDLYSVQSSRGPTPRPSNFEENCAPGAQALGSPRFGFYPAAPTANSYPTP
NPDISAPAPATNNKNPNSTKQQQQQMQVQVQSKANTHDAKELHMFVWSSSASPVSEGGGLHVFG
GTDFGSAEQSGRSDQGAKEIRMLVTDHPQNRGDKEATPENEDFGGEDFSFPGGEDREKEGIADL
TKLGSSSTKELHPKATEISDSGAGKQMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLIA
YRWHVSMPKIIGKSISILSDAGLGMAMFSLGLDWRDSNQL

Repeat found in LOC122646247
Repeat occurs 3 times in a sequence of 547 amino acids
Location between 53784726 and 53786625
Coverage of 3.84 %
Instances:
TPRPSNL | TPRGSNF | TPRPSNF |
pattern: TPR[GP]SN[LF]
MITWKDLYTVLTAVVPLYVAMILAYGSVRWWKIFTPDQCSGINRFVAIFAVPLLSFHFISTND
PYSMNFRFIAADTLQKIILLVVLGIWTNFTRNGSLEWMITIFSLSTLPNTLVMGIPLLIAMYGD
YSGNLMVQVVVLQCIIWYTLLLFLFEYRGAKMLIMEQFPDTAASIVSFKVDSDIMSLDGRDFLE
TEAEIGDDGKLHVSVRKSNASRRSLALTPRPSNLTGAEIYSLSSSRNPTPRGSNFNNADFYSMM
GCQGFPARHSNFGSTDLYSVQSSRGPTPRPSNFEENCAPGAQALGSPRFGFYPAAPTANSYPTP
NPDISAPAPATNNKNPNSTKQQQQQMQVQVQSKANTHDAKELHMFVWSSSASPVSEGGGLHVFG
GTDFGSAEQSGRSDQGAKEIRMLVTDHPQNRGDKEATPENEDFGGEDFSFPGGEDREKEGIADL
TKLGSSSTKELHPKATEISDSGAGKQMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLIA
YRWHVSMPKIIGKSISILSDAGLGMAMFSLEPDRSQ

Repeat found in LOC122646250
Repeat occurs 5 times in a sequence of 410 amino acids
Location between 53967151 and 53982306
Coverage of 12.2 %
Instances:
VPLGTNILPA | VPLAQPSAVN | VPLAQPSAVN | VPLAQPSAVN | VPLTQPSAVG
pattern: VPL[TGA][TQ][NP][SI][LA][VP][NGA]
MAAAVATPTTSKPSVPEHVSHKNRLQEYTQRSAIPLPIYQTINEGSPHAPMFRSTVLVDGAAY
VSVKTFSQRKEAEQAVAKHALERILEKIKNEGCPLIVEDTIFCKSILNEYAVKMSLEKPSYKTT
QSEGLLPLFFSSLSFNGKLYTGSAGKNKKEAEQLAARTVIQSILVESNSGTCLSEIIKSKGKLY
AAMHKIKDSGASMSQQREVGVPLGTNILPAYSGTCQRQLDIVPVILSHVHELKKPKQEPFSEAS
TSFTGAFEPVPHVHQPLPNQVRNEVPLAQPSAVNVRGSSQGTVVVQNEVPLAQPSAVNVRGSSQ
GTVVVQNEVPLAQPSAVNVRGSSQGIVVQSEVPLTQPSAVGGSSEGTVVTAVGVKRSRKKNRRS
GKKRFRNDESQFAMHAINQTASCSVAQ

### Similar gene clusters

### NC_057926 - Cluster 94 - Alkaloid

### Gene cluster description

Download cluster GenBank file
NC_057926 - Gene Cluster 94. Type = alkaloid. Location: 54556491 - 54629020 nt. Click on genes for more information.
Show pHMM detection rules used
plants/alkaloid: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Bet_v_1/Cu_amine_oxid/Str_synth/BBE/Orn_DAP_Arg_deC/Pyridoxal_deC]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters

### NC_057926 - Cluster 95 - Polyketide

### Gene cluster description

Download cluster GenBank file
NC_057926 - Gene Cluster 95. Type = polyketide. Location: 56022597 - 56286971 nt. Click on genes for more information.
Show pHMM detection rules used
plants/plant: (minimum(4,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[]))
plants/polyketide: (minimum(3,[NAD_binding_4, FAE1_CUT1_RppA, HAD_RAM2_N, Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[Chal_sti_synt_C/Chal_sti_synt_N]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Thr_dehydrat_C]) or minimum(3,[E1_dh,PALP,Thr_dehydrat_C,Orn_DAP_Arg_deC,Pyridoxal_deC,BBE,FA_hydroxylase,CER1-like_C,ECH_2,Oxidored_FMN,3Beta_HSD,Glyco_hydro_1,ADH_N,ADH_N_2,Abhydrolase_3,Aldo_ket_red,cMT,nMT,oMT,adh_short,Chal_sti_synt_C,Chal_sti_synt_N,COesterase,UDPGT,Glyco_transf_28,Glycos_transf_1,Glycos_transf_2,Lycopene_cycl,NAD_binding_1,p450,SQHop_cyclase_C,SQHop_cyclase_N,Prenyltrans,Terpene_synth_C,Terpene_synth,Transferase,Aminotran_1_2,AMP-binding,DIOX_N,Dirigent,Bet_v_1,Cu_amine_oxid,Str_synth,Trp_syntA,His_biosynth,adh_short_C2,Peptidase_S10,Prenyltransf,Epimerase,2OG-FeII_Oxy,Aminotran_3,Methyltransf_2,Methyltransf_3,Methyltransf_7,PRISE,Cellulose_synt,Chalcone,ERG4_ERG24,FA_desaturase,FA_desaturase_2,Methyltransf_11,polyprenyl_synt,SE,SQS_PSY,TPMT,UbiA,Lipoxygenase,Lyase_aromatic,HMGL-like,Chalcone_3,Chalcone_2,Acetyltransf_1,UDPGT_2,GMC_oxred_N,GMC_oxred_C,Amino_oxidase,DAHP_synth_1,DAHP_synth_2],[AMP-binding,Chal_sti_synt_C,Chal_sti_synt_N]))

#### Legend:

Only available when smCOG analysis was run
biosynthetic genes
transport-related genes
regulatory genes
other genes

### Similar gene clusters